                         SEQUENCE LISTING

<110>  Hackensack Meridian Health, Inc.
       Hackensack, Meridian Health
       Rutgers, The State University of New Jersey
 
<120>  A GENOTYPIC ASSAY TO SUBSPECIATE M. ABSCESSUS COMPLEX STRAINS  
       AND DETERMINE MACROLIDE RESISTANCE

<130>  HMH 3.4F-003[17]

<150>  63/185,678
<151>  2021-05-07

<160>  29    

<170>  PatentIn version 3.5

<210>  1
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  MAB2248 forward primers

<400>  1
gtgaccggtc tcgatcagtt                                                   20


<210>  2
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  MAB2248 reverse primers

<400>  2
cattgtctgg cgtcaatggc                                                   20


<210>  3
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  MAB2248 M. abscessus subsp. bolletii molecular beacon probe

<400>  3
ccgtgcctcg ggaaccggat gactgcacgg                                        30


<210>  4
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  MAB2830 forward primers

<400>  4
cctcatcgag gacggtcaga                                                   20


<210>  5
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  MAB2830 reverse primers

<400>  5
cacgaatccg ggcagcaata                                                   20


<210>  6
<211>  31
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  MAB2830 M. abscessus subsp. abscessus molecular beacon probe

<400>  6
ccgtcgcgag gccggcatcg gcgcacgacg g                                      31


<210>  7
<211>  15
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  MAB2830 M. abscessus subsp. massiliense molecular beacon probe

<400>  7
ccgtcgcact acgag                                                        15


<210>  8
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  23S rrl forward primers

<400>  8
cggcgaaatt gcactacgag                                                   20


<210>  9
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  23S rrl reverse primers

<400>  9
ccgaaccaaa cgccaatacc                                                   20


<210>  10
<211>  29
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  23S rrl wild-type molecular beacon probe

<400>  10
cgctgccagg acgaaaagac cccgcagcg                                         29


<210>  11
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Erm(41) delta forward primers

<400>  11
ttcaggggag ttcgttgtga                                                   20


<210>  12
<211>  19
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Erm(41) delta reverse primers

<400>  12
aaagtgcttc gcggcaatg                                                    19


<210>  13
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Erm(41) delta molecular beacon probe

<400>  13
cacggtggac gctccgggcc cgtg                                              24


<210>  14
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Erm(41) T28C forward primers

<400>  14
gcatgccccg atatctttgg                                                   20


<210>  15
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Erm(41) T28C reverse primers

<400>  15
atccacaacg aactcccctg                                                   20


<210>  16
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Erm(41) T28C molecular beacon probe

<400>  16
cgctgacgcc agcggggctg cagcg                                             25


<210>  17
<211>  34
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  MAB2248 M. abscessus subsp. abscessus

<400>  17
ccgatcggag tcaaccggtt cgcgggcatc gaac                                   34


<210>  18
<211>  34
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  MAB2248 M. abscessus subsp. bolletii

<400>  18
ccgatcggag tcatccggtt cccgagcatc gaac                                   34


<210>  19
<211>  34
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  MAB2248 M. abscessus subsp. massiliense

<400>  19
ccgatcggag tcaaccggtt cgcgggcatc gaac                                   34


<210>  20
<211>  34
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  MAB2830 M. abscessus subsp. abscessus

<400>  20
tcgatgcctg cgccgatgcc ggcctcgatg cggg                                   34


<210>  21
<211>  34
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  MAB2830 M. abscessus subsp. bolletii

<400>  21
tcgatgcctg ggccgatacc ggcctcgatg cggg                                   34


<210>  22
<211>  34
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  MAB2830 M. abscessus subsp. massiliense

<400>  22
tcgatgcctg gaccgatacc ggcttcgatg cggg                                   34


<210>  23
<211>  33
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  23S rrl 2058-2059 wild-type

<400>  23
aaggtcccgg ggtcttttcg tcctgccgcg cgt                                    33


<210>  24
<211>  33
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  23S rrl 2058-2059 AG mutant

<400>  24
aaggtcccgg ggtctcttcg tcctgccgcg cgt                                    33


<210>  25
<211>  33
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  23S rrl 2058-2059 GA mutant

<400>  25
aaggtcccgg ggtcttctcg tcctgccgcg cgt                                    33


<210>  26
<211>  31
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Erm(41) T28C wild-type

<400>  26
gcggatacca gccccactgg cgtcgcgacc g                                      31


<210>  27
<211>  31
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Erm(41) T28C mutant

<400>  27
gcggatacca gccccgctgg cgtcgcgacc g                                      31


<210>  28
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Erm(41) delta wild-type

<400>  28
tgattccggc ccgtagcgtc caatgg                                            26


<210>  29
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Erm(41) delta mutant

<400>  29
tgattccggc ccggagcgtc cagcgg                                            26


