                         SEQUENCE LISTING

<110>  New York Genome Center, Inc.
       New York University
 
<120>  METHODS AND COMPOSITIONS FOR COMBINATORIAL TARGETING OF THE CELL 
       TRANSCRIPTOME

<130>  NYG-LIPP-131.PCT

<150>  US 63/154,985
<151>  2021-03-01

<150>  US 63/306,343
<151>  2022-02-03

<160>  44    

<170>  PatentIn version 3.5

<210>  1
<211>  88
<212>  RNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct


<220>
<221>  misc_feature
<222>  (52)..(66)
<223>  n is a, c, g, or u

<400>  1
aaccccuacc aacuggucgg gguucaaagu ccuuggcacc cgagaauucc annnnnnnnn       60

nnnnnngcuu uaaggccggu ccuagcaa                                          88


<210>  2
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  2
ttgctaggac cggccttaaa gc                                                22


<210>  3
<211>  72
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct


<220>
<221>  misc_feature
<222>  (23)..(50)
<223>  n is a, c, g, or t

<400>  3
gtcagatgtg tataagagac agnnnnnnnn nnnnnnnnnn nnnnnnnnnn ttgctaggac       60

cggccttaaa gc                                                           72


<210>  4
<211>  88
<212>  RNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct


<220>
<221>  misc_feature
<222>  (52)..(66)
<223>  n is a, c, g, or u

<400>  4
aaccccuacc aacuggucgg gguuugaaac ccuuggcacc cgagaauucc annnnnnnnn       60

nnnnnngcuu uaaggccggu ccuagcaa                                          88


<210>  5
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic constructs

<400>  5
aagcagtggt atcaacgcag agtacatggg                                        30


<210>  6
<211>  168
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct


<220>
<221>  misc_feature
<222>  (23)..(50)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (73)..(87)
<223>  n is a, c, g, or t

<400>  6
gtcagatgtg tataagagac agnnnnnnnn nnnnnnnnnn nnnnnnnnnn ttgctaggac       60

cggccttaaa gcnnnnnnnn nnnnnnntgg aattctcggg tgccaagggt ttcaaacccc      120

gaccagttgg taggggttcc catgtactct gcgttgatac cactgctt                   168


<210>  7
<211>  27
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  7
gcagcgtcag atgtgtataa gagacag                                           27


<210>  8
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  8
aagcagtggt atcaacgcag ag                                                22


<210>  9
<211>  173
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct


<220>
<221>  misc_feature
<222>  (28)..(55)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (78)..(92)
<223>  n is a, c, g, or t

<400>  9
gcagcgtcag atgtgtataa gagacagnnn nnnnnnnnnn nnnnnnnnnn nnnnnttgct       60

aggaccggcc ttaaagcnnn nnnnnnnnnn nntggaattc tcgggtgcca agggtttcaa      120

accccgacca gttggtaggg gttcccatgt actctgcgtt gataccactg ctt             173


<210>  10
<211>  173
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct


<220>
<221>  misc_feature
<222>  (82)..(96)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (119)..(146)
<223>  n is a, c, g, or t

<400>  10
aagcagtggt atcaacgcag agtacatggg aacccctacc aactggtcgg ggtttgaaac       60

ccttggcacc cgagaattcc annnnnnnnn nnnnnngctt taaggccggt cctagcaann      120

nnnnnnnnnn nnnnnnnnnn nnnnnnctgt ctcttataca catctgacgc tgc             173


<210>  11
<211>  27
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  11
gcagcgtcag atgtgtataa gagacag                                           27


<210>  12
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  12
ccttggcacc cgagaattcc                                                   20


<210>  13
<211>  113
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct


<220>
<221>  misc_feature
<222>  (28)..(55)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (78)..(92)
<223>  n is a, c, g, or t

<400>  13
gcagcgtcag atgtgtataa gagacagnnn nnnnnnnnnn nnnnnnnnnn nnnnnttgct       60

aggaccggcc ttaaagcnnn nnnnnnnnnn nntggaattc tcgggtgcca agg             113


<210>  14
<211>  113
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct


<220>
<221>  misc_feature
<222>  (22)..(36)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (59)..(86)
<223>  n is a, c, g, or t

<400>  14
ccttggcacc cgagaattcc annnnnnnnn nnnnnngctt taaggccggt cctagcaann       60

nnnnnnnnnn nnnnnnnnnn nnnnnnctgt ctcttataca catctgacgc tgc             113


<210>  15
<211>  62
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  15
aatgatacgg cgaccaccga gatctacact cgtcggcagc gtcagatgtg tataagagac       60

ag                                                                      62


<210>  16
<211>  113
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct


<220>
<221>  misc_feature
<222>  (28)..(55)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (78)..(92)
<223>  n is a, c, g, or t

<400>  16
gcagcgtcag atgtgtataa gagacagnnn nnnnnnnnnn nnnnnnnnnn nnnnnttgct       60

aggaccggcc ttaaagcnnn nnnnnnnnnn nntggaattc tcgggtgcca agg             113


<210>  17
<211>  113
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct


<220>
<221>  misc_feature
<222>  (22)..(36)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (59)..(86)
<223>  n is a, c, g, or t

<400>  17
ccttggcacc cgagaattcc annnnnnnnn nnnnnngctt taaggccggt cctagcaann       60

nnnnnnnnnn nnnnnnnnnn nnnnnnctgt ctcttataca catctgacgc tgc             113


<210>  18
<211>  65
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct


<220>
<221>  misc_feature
<222>  (25)..(32)
<223>  n is a, c, g, or t

<400>  18
gttcgtcttc tgccgtatgc tctannnnnn nncactgacc tcaaggaacc gtgggctctt       60

aaggt                                                                   65


<210>  19
<211>  191
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct


<220>
<221>  misc_feature
<222>  (62)..(89)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (112)..(126)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (160)..(167)
<223>  n is a, c, g, or t

<400>  19
atgatacggc gaccaccgag atctacactc gtcggcagcg tcagatgtgt ataagagaca       60

gnnnnnnnnn nnnnnnnnnn nnnnnnnnnt tgctaggacc ggccttaaag cnnnnnnnnn      120

nnnnnntgga attctcgggt gccaaggaac tccagtcacn nnnnnnnatc tcgtatgccg      180

tcttctgctt g                                                           191


<210>  20
<211>  191
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct


<220>
<221>  misc_feature
<222>  (25)..(32)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (66)..(80)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (103)..(130)
<223>  n is a, c, g, or t

<400>  20
caagcagaag acggcatacg agatnnnnnn nngtgactgg agttccttgg cacccgagaa       60

ttccannnnn nnnnnnnnnn gctttaaggc cggtcctagc aannnnnnnn nnnnnnnnnn      120

nnnnnnnnnn ctgtctctta tacacatctg acgctgccga cgagtgtaga tctcggtggt      180

cgccgtatca t                                                           191


<210>  21
<211>  44
<212>  RNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct


<220>
<221>  misc_feature
<222>  (8)..(22)
<223>  n is a, c, g, or u

<400>  21
cgcagagnnn nnnnnnnnnn nngcuuuaag gccgguccua gcaa                        44


<210>  22
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  22
ttgctaggac cggccttaaa gc                                                22


<210>  23
<211>  16
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  23
baaaaaaaaa aaaaaa                                                       16


<210>  24
<211>  16
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  24
tttttttttt tttttv                                                       16


<210>  25
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  25
gctaccgtcg ctgtgttaac aga                                               23


<210>  26
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  26
tctgttaaca cagcgacggt agc                                               23


<210>  27
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  27
tctgttaaca ccggcgacgg cctg                                              24


<210>  28
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  28
tctgttaacc cagtgacagt agt                                               23


<210>  29
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  29
gaccgctctt cctgagtcac tag                                               23


<210>  30
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  30
ctagtgactc aggaagagcg gtc                                               23


<210>  31
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  31
agccggactc aaggaagagc ggtc                                              24


<210>  32
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  32
ctagtgactc aaggagagag ggtt                                              24


<210>  33
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  33
ctagtgacac aggaagacgg aa                                                22


<210>  34
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  34
tgggtgacgc aggaaagcgg tc                                                22


<210>  35
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  35
gataccctga taacgacact agc                                               23


<210>  36
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  36
gctagtgtcg ttatcagggt atc                                               23


<210>  37
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  37
cctagtgtgg ttatcaaggt ggt                                               23


<210>  38
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  38
gctagtgtcg atattagggt cgt                                               23


<210>  39
<211>  95
<212>  RNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  39
gaagguuucu cucuuccuga gaauacaacc cguauuguau ucucagguuc ugcucuuugg       60

ggccuuuccc uagcuuaaaa aaaaaaagag cagaa                                  95


<210>  40
<211>  93
<212>  RNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  40
agguguuucu cuuacugagu gcagcccaug gccgcacuca gguucugcuu uacaccuucc       60

caucugugaa agagugagca ggaaaaagca gaa                                    93


<210>  41
<211>  54
<212>  RNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  41
cuuggugcuu agcucuuuca ccaaggauau uacacgcgga auaccgcaag ggaa             54


<210>  42
<211>  55
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  42
cccaacgggg ggctgaaact cccaauagga cccaaguccc cccccgagga cuggg            55


<210>  43
<211>  71
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  43
ugucaggccu gcuagucagc cacaguuugg ggaaagcugu gcagcctgua acccccccag       60

gagaagcugg g                                                            71


<210>  44
<211>  42
<212>  RNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  44
uugacgcggu ucuaucuagu uacgcguuaa accaacuaga aa                          42


