                         SEQUENCE LISTING

<110>  YEDA RESEARCH AND DEVELOPMENT CO. LTD.
       ULITSKY, Igor
       ROSS, Caroline Jane
 
<120>  COMPOSITIONS FOR USE IN THE TREATMENT OF CHD2 HAPLOINSUFFICIENCY 
       AND METHODS OF IDENTIFYING SAME

<130>  89180

<150>  US 63/127,212
<151>  2020-12-18

<160>  144   

<170>  PatentIn version 3.5

<210>  1
<211>  3
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Algorithm derived nucleic acid sequences

<400>  1
aug                                                                      3


<210>  2
<211>  4
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Algorithm derived nucleic acid sequences

<400>  2
augg                                                                     4


<210>  3
<211>  6
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Algorithm derived nucleic acid sequences

<400>  3
aauaaa                                                                   6


<210>  4
<211>  7
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Algorithm derived nucleic acid sequences

<400>  4
aagaugg                                                                  7


<210>  5
<211>  6
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Algorithm derived nucleic acid sequences

<400>  5
aagaug                                                                   6


<210>  6
<211>  7
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Algorithm derived nucleic acid sequences

<400>  6
aaaugga                                                                  7


<210>  7
<211>  20
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Algorithm derived nucleic acid sequences

<400>  7
ccatagtaga ctgccatctt                                                   20


<210>  8
<211>  20
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Algorithm derived nucleic acid sequences

<400>  8
aagatggcag tctactatgg                                                   20


<210>  9
<211>  18
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Algorithm derived nucleic acid sequences

<400>  9
atccactgtc catttgtg                                                     18


<210>  10
<211>  18
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Algorithm derived nucleic acid sequences

<400>  10
cacaaatgga cagtggat                                                     18


<210>  11
<211>  1593
<212>  DNA
<213>  homo sapiens

<400>  11
atggccggag aggcagcagc accccgagct gtcaggcgtt ccgccgcggc cgcgaggccc       60

gccggccggc ggggagctac gcccggacgg ccagcaggcc cgcgggagtg gggctgccgc      120

ggctgaggcg aggcgggccg cgcgcgtcgg cgtcacagcc cgcggcagag gcgcccaggg      180

cggccgggcc cacgacgccg aaagcgccgc tgcggttgcc gcctcggagg ctcccccggg      240

ccccggcggc tggacccggc gcgggcggga ggctcgggcg ggcggtccgg cccgggactc      300

gggtttgggc gaccaggagg tgccggtggc cgcgctcgga cccggtgact taagagatta      360

aaattaattt ggttgctgtt ggttctgaac aaataatgag ttcttttatt tgaggtatgc      420

cattttgaag actgagacgt tggagtttta tcctagagga taaaggaaat ctttgggaaa      480

gtcagtattt tatatagcaa aaatatgaac ctcaaactga atcctctaaa ggccccatac      540

aatgaagtag acattggtgg aaacatttac acccagtcag cttgaagagt ttcaaatgga      600

ccctaccact gagaaatcaa gatggcagtc tactatgggg aattgaggaa aaatggatta      660

atacaagagt cctgtgataa tatacaacca agacagggtt cttttaacat ggattccatg      720

cagtgaatga agacataggt ttcttaccca acacaaatgg acagtggatt tgactttcta      780

aagacttttt ttgtggacat tttgacattt ggagaagaaa gatggcacac taacccagat      840

aatagttttt atgcctggaa ttttttgcag tttgatttgt atgcgtatga cctcttgaaa      900

tgttaatttt taataaaatt tgtaacactt aaaaatttct cagtttgggt tttttttttt      960

aagtggaagt ttaattaaat gtttagtttt attttagtaa tactttggcc tttgtagttg     1020

ccgagtggta aagtgtactg aatatgaata aagctggtaa attggaaatg gtgtaatcga     1080

aaacatttta cttggtttat gaagatttac gtttttcaca aagttgtgct cttagatggt     1140

catttggttt aaatactgtt ttgtttgtgc tttcatgaaa cacctttcaa aacaactcaa     1200

tgggtaataa tagaatctga ttttaatctg ccacaagatt ttaatgaact tgaaacaaac     1260

tgcttgttgc tcgaaaattc aggatgagtg atacacatat acttctgaat tattttgtgt     1320

tgattgaaat ggtttcttaa gctttttaat actataaata catcttgcta tagaatattc     1380

atctgaatat ttaaattaat gtctcctatt gtcttactat tagaggaaga agtgttggat     1440

ttatgggtta gggtccttgg agtattcaca attttttaaa tttgaaatta tgtgtgtaat     1500

ccattttata taactttgaa gtaggattaa tatcttgtat cgtctttatt ttgtacaatt     1560

ggggatttag aataaatgaa ttgcaccctg cca                                  1593


<210>  12
<211>  1787
<212>  DNA
<213>  homo sapiens

<400>  12
atggccggag aggcagcagc accccgagct gtcaggcgtt ccgccgcggc cgcgaggccc       60

gccggccggc ggggagctac gcccggacgg ccagcaggcc cgcgggagtg gggctgccgc      120

ggctgaggcg aggcgggccg cgcgcgtcgg cgtcacagcc cgcggcagag gcgcccaggg      180

cggccgggcc cacgacgccg aaagcgccgc tgcggttgcc gcctcggagg ctcccccggg      240

ccccggcggc tggacccggc gcgggcggga ggctcgggcg ggcggtccgg cccgggactc      300

gggtttgggc gaccaggagg tgccggtggc cgcgctcgga cccggttctc caacggagga      360

gctttttaac ctctttccgg tgaggtggga actcatcttc atgatcgaat ttaaaagaac      420

aatggaaccc tgactacgtt tcaacaaaaa taaaacttgt ttttttccct cctattgggt      480

gttggctttt aactctttca aagccgattt tgaaacggct gcagtgatac atgcgaaggt      540

gacttaagag attaaaatta atttggttgc tgttggttct gaacaaataa tgagttcttt      600

tatttgaggt atgccatttt gaagactgag acgttggagt tttatcctag aggataaagg      660

aaatctttgg gaaagtcagt attttatata gcaaaaatat gaacctcaaa ctgaatcctc      720

taaaggcccc atacaatgaa gtagacattg gtggaaacat ttacacccag tcagcttgaa      780

gagtttcaaa tggaccctac cactgagaaa tcaagatggc agtctactat ggggaattga      840

ggaaaaatgg attaatacaa gagtcctgtg ataatataca accaagacag ggttctttta      900

acatggattc catgcagtga atgaagacat aggtttctta cccaacacaa atggacagtg      960

gatttgactt tctaaagact ttttttgtgg acattttgac atttggagaa gaaagatggc     1020

acactaaccc agataatagt ttttatgcct ggaatttttt gcagtttgat ttgtatgcgt     1080

atgacctctt gaaatgttaa tttttaataa aatttgtaac acttaaaaat ttctcagttt     1140

gggttttttt ttttaagtgg aagtttaatt aaatgtttag ttttatttta gtaatacttt     1200

ggcctttgta gttgccgagt ggtaaagtgt actgaatatg aataaagctg gtaaattgga     1260

aatggtgtaa tcgaaaacat tttacttggt ttatgaagat ttacgttttt cacaaagttg     1320

tgctcttaga tggtcatttg gtttaaatac tgttttgttt gtgctttcat gaaacacctt     1380

tcaaaacaac tcaatgggta ataatagaat ctgattttaa tctgccacaa gattttaatg     1440

aacttgaaac aaactgcttg ttgctcgaaa attcaggatg agtgatacac atatacttct     1500

gaattatttt gtgttgattg aaatggtttc ttaagctttt taatactata aatacatctt     1560

gctatagaat attcatctga atatttaaat taatgtctcc tattgtctta ctattagagg     1620

aagaagtgtt ggatttatgg gttagggtcc ttggagtatt cacaattttt taaatttgaa     1680

attatgtgtg taatccattt tatataactt tgaagtagga ttaatatctt gtatcgtctt     1740

tattttgtac aattggggat ttagaataaa tgaattgcac cctgcca                   1787


<210>  13
<211>  1497
<212>  DNA
<213>  homo sapiens

<400>  13
ctcttctcgc actgcccctc cgtggtcggg ggccggctct cgccggcggg atgcgcctcg       60

gtgccctggg cccgagtcgt agggtcctgg ggtagggggc acgcggggcc ccgctgcaga      120

gcccgcgggc ggcaggtggg cggggggcag cctcgtcgcc gggactggat ccgccgggaa      180

aggggcggcg ggtgaatgcc ggcgagagcc cgaaggggat cgggcgtgga gagccccttt      240

ctgtcctggt gacttaagag attaaaatta atttggttgc tgttggttct gaacaaataa      300

tgagttcttt tatttgaggt atgccatttt gaagactgag acgttggagt tttatcctag      360

aggataaagg aaatctttgg gaaagtcagt attttatata gcaaaaatat gaacctcaaa      420

ctgaatcctc taaaggcccc atacaatgaa gtagacattg gtggaaacat ttacacccag      480

tcagcttgaa gagtttcaaa tggaccctac cactgagaaa tcaagatggc agtctactat      540

ggggaattga ggaaaaatgg attaatacaa gagtcctgtg ataatataca accaagacag      600

ggttctttta acatggattc catgcagtga atgaagacat aggtttctta cccaacacaa      660

atggacagtg gatttgactt tctaaagact ttttttgtgg acattttgac atttggagaa      720

gaaagatggc acactaaccc agataatagt ttttatgcct ggaatttttt gcagtttgat      780

ttgtatgcgt atgacctctt gaaatgttaa tttttaataa aatttgtaac acttaaaaat      840

ttctcagttt gggttttttt ttttaagtgg aagtttaatt aaatgtttag ttttatttta      900

gtaatacttt ggcctttgta gttgccgagt ggtaaagtgt actgaatatg aataaagctg      960

gtaaattgga aatggtgtaa tcgaaaacat tttacttggt ttatgaagat ttacgttttt     1020

cacaaagttg tgctcttaga tggtcatttg gtttaaatac tgttttgttt gtgctttcat     1080

gaaacacctt tcaaaacaac tcaatgggta ataatagaat ctgattttaa tctgccacaa     1140

gattttaatg aacttgaaac aaactgcttg ttgctcgaaa attcaggatg agtgatacac     1200

atatacttct gaattatttt gtgttgattg aaatggtttc ttaagctttt taatactata     1260

aatacatctt gctatagaat attcatctga atatttaaat taatgtctcc tattgtctta     1320

ctattagagg aagaagtgtt ggatttatgg gttagggtcc ttggagtatt cacaattttt     1380

taaatttgaa attatgtgtg taatccattt tatataactt tgaagtagga ttaatatctt     1440

gtatcgtctt tattttgtac aattggggat ttagaataaa tgaattgcac cctgcca        1497


<210>  14
<211>  8
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Algorithm derived nucleic acid sequences

<400>  14
uguacauu                                                                 8


<210>  15
<211>  6
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Algorithm derived nucleic acid sequences

<400>  15
auugcu                                                                   6


<210>  16
<211>  6
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Algorithm derived nucleic acid sequences

<400>  16
caucca                                                                   6


<210>  17
<211>  6
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Algorithm derived nucleic acid sequences

<400>  17
auggcg                                                                   6


<210>  18
<211>  9
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Algorithm derived nucleic acid sequences

<400>  18
ugugcaaua                                                                9


<210>  19
<211>  6
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Algorithm derived nucleic acid sequences

<400>  19
acaagu                                                                   6


<210>  20
<211>  12
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Algorithm derived nucleic acid sequences

<400>  20
caacaaaauc ac                                                           12


<210>  21
<211>  10
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Algorithm derived nucleic acid sequences

<400>  21
gucuuccauu                                                              10


<210>  22
<211>  7
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Algorithm derived nucleic acid sequences

<400>  22
uguauag                                                                  7


<210>  23
<211>  7
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Algorithm derived nucleic acid sequences

<400>  23
ugcauga                                                                  7


<210>  24
<211>  7
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Algorithm derived nucleic acid sequences

<400>  24
cuaugca                                                                  7


<210>  25
<211>  8
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Algorithm derived nucleic acid sequences

<400>  25
gcaauaaa                                                                 8


<210>  26
<211>  8
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Algorithm derived nucleic acid sequences

<400>  26
gcaauaaa                                                                 8


<210>  27
<211>  7
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Algorithm derived nucleic acid sequences

<400>  27
wgcauga                                                                  7


<210>  28
<211>  8
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Algorithm derived nucleic acid sequences


<220>
<221>  misc_feature
<222>  (5)..(5)
<223>  n is a, c, g, or u

<400>  28
uguanaua                                                                 8


<210>  29
<211>  33
<212>  RNA
<213>  Artificial sequence

<220>
<223>  nucleic acid motif cotainng conserved motifs discovered by 
       integer linear programming (ILP)

<400>  29
agaaagcaua ucgagaaaga ucuauuagaa agu                                    33


<210>  30
<211>  39
<212>  RNA
<213>  Artificial sequence

<220>
<223>  nucleic acid motif cotainng conserved motifs discovered by 
       integer linear programming (ILP)

<400>  30
ugaaagccga gaagaaagcc uacugagaaa cuagaaagu                              39


<210>  31
<211>  33
<212>  RNA
<213>  Artificial sequence

<220>
<223>  nucleic acid motif cotainng conserved motifs discovered by 
       integer linear programming (ILP)

<400>  31
agaaagcgaa cugagaaagu ccuaguagaa agu                                    33


<210>  32
<211>  32
<212>  RNA
<213>  Artificial sequence

<220>
<223>  nucleic acid motif cotainng conserved motifs discovered by 
       integer linear programming (ILP)

<400>  32
agaaagucga ugaugagaaa ucuaacgaaa gu                                     32


<210>  33
<211>  22
<212>  RNA
<213>  Artificial sequence

<220>
<223>  hsa-miR-25 nucleic acid sequence

<400>  33
agucuggcuc uguucacguu ac                                                22


<210>  34
<211>  22
<212>  RNA
<213>  Artificial sequence

<220>
<223>  hsa-miR-92a nucleic acid sequece

<400>  34
uguccggccc uguucacguu au                                                22


<210>  35
<211>  19
<212>  RNA
<213>  Artificial sequence

<220>
<223>  partial Cyrano lncRNA from human

<400>  35
ccgggauaug ugcaauaga                                                    19


<210>  36
<211>  18
<212>  RNA
<213>  Artificial sequence

<220>
<223>  partial Cyrano lncRNA from Mouse

<400>  36
cgggauaugu gcaauaua                                                     18


<210>  37
<211>  18
<212>  RNA
<213>  Artificial sequence

<220>
<223>  partial Cyrano lncRNA from Cow

<400>  37
cgggauaugu gcaauaga                                                     18


<210>  38
<211>  17
<212>  RNA
<213>  Artificial sequence

<220>
<223>  partial Cyrano lncRNA from Chicken

<400>  38
ggggcaugug caauaga                                                      17


<210>  39
<211>  16
<212>  RNA
<213>  Artificial sequence

<220>
<223>  partial Cyrano lncRNA from Xenopus

<400>  39
cuggggaugu gcaaua                                                       16


<210>  40
<211>  19
<212>  RNA
<213>  Artificial sequence

<220>
<223>  partial Cyrano lncRNA from Fugu

<400>  40
ccgggauuug ugcaauaau                                                    19


<210>  41
<211>  19
<212>  RNA
<213>  Artificial sequence

<220>
<223>  partial Cyrano lncRNA from Medaka

<400>  41
ccgggaucug ugcaauauu                                                    19


<210>  42
<211>  17
<212>  RNA
<213>  Artificial sequence

<220>
<223>  partial Cyrano lncRNA from Zebrafish

<400>  42
gggaaaugug caauauu                                                      17


<210>  43
<211>  24
<212>  RNA
<213>  Artificial sequence

<220>
<223>  hsa-miR-7 nucleic acid sequence

<400>  43
uuguuguuuu agugaucaga aggu                                              24


<210>  44
<211>  30
<212>  RNA
<213>  Artificial sequence

<220>
<223>  partial Cyrano lncRNA from Human

<400>  44
agaacaacaa aaucaccaau gucuuccauu                                        30


<210>  45
<211>  30
<212>  RNA
<213>  Artificial sequence

<220>
<223>  partial Cyrano lncRNA from Mouse

<400>  45
agaacaacaa aaucaccaau gucuuccauu                                        30


<210>  46
<211>  30
<212>  RNA
<213>  Artificial sequence

<220>
<223>  partial Cyrano lncRNA from Cow

<400>  46
agaacaacaa aaucaccaau gucuuccauu                                        30


<210>  47
<211>  30
<212>  RNA
<213>  Artificial sequence

<220>
<223>  partial Cyrano lncRNA from Chicken

<400>  47
aaaacaacaa aaucaccaau gucuuccauu                                        30


<210>  48
<211>  30
<212>  RNA
<213>  Artificial sequence

<220>
<223>  partial Cyrano lncRNA from Platypus

<400>  48
agaacaacaa aaucaccaau gucuuccauu                                        30


<210>  49
<211>  30
<212>  RNA
<213>  Artificial sequence

<220>
<223>  partial Cyrano lncRNA from Xenopus

<400>  49
agaacaacaa aaucaccaau gucuuccauu                                        30


<210>  50
<211>  30
<212>  RNA
<213>  Artificial sequence

<220>
<223>  partial Cyrano lncRNA from Fugu

<400>  50
aaagcaacaa aaucaccaau gucuuccauu                                        30


<210>  51
<211>  30
<212>  RNA
<213>  Artificial sequence

<220>
<223>  partial Cyrano lncRNA from Medaka

<400>  51
aaagcaacaa aaucaccaau gucuuccauu                                        30


<210>  52
<211>  30
<212>  RNA
<213>  Artificial sequence

<220>
<223>  partial Cyrano lncRNA from Zebrafish

<400>  52
aaaacaacaa aaucaccaau gucuuccauu                                        30


<210>  53
<211>  26
<212>  DNA
<213>  Artificial sequence

<220>
<223>  partial Cyrano lncRNA from Human

<400>  53
gaagctgcga agatggcgga gtaagg                                            26


<210>  54
<211>  26
<212>  DNA
<213>  Artificial sequence

<220>
<223>  partial Cyrano lncRNA from Mouse

<400>  54
gaaggagcga agatggcgga gtgagg                                            26


<210>  55
<211>  26
<212>  DNA
<213>  Artificial sequence

<220>
<223>  partial Cyrano lncRNA from Rat

<400>  55
gaaggagcga agatggcgga gtgagg                                            26


<210>  56
<211>  26
<212>  DNA
<213>  Artificial sequence

<220>
<223>  partial Cyrano lncRNA from Rabbit

<400>  56
gaaggagcga agatggcgga gtgagg                                            26


<210>  57
<211>  26
<212>  DNA
<213>  Artificial sequence

<220>
<223>  partial Cyrano lncRNA from Cow

<400>  57
gaaagagcga agatggcgga gtgagg                                            26


<210>  58
<211>  26
<212>  DNA
<213>  Artificial sequence

<220>
<223>  partial Cyrano lncRNA from Horse

<400>  58
gaaggagcaa agatggcgga gtgagg                                            26


<210>  59
<211>  26
<212>  DNA
<213>  Artificial sequence

<220>
<223>  partial Cyrano lncRNA from Dog

<400>  59
aaaagagcga agatggcgga gtgaga                                            26


<210>  60
<211>  26
<212>  DNA
<213>  Artificial sequence

<220>
<223>  partial Cyrano lncRNA from Elephant

<400>  60
gaaggagcga agatggcgga gtgagg                                            26


<210>  61
<211>  26
<212>  DNA
<213>  Artificial sequence

<220>
<223>  partial Cyrano lncRNA from Opossum

<400>  61
aaggaagaga agatggcggc gtgagg                                            26


<210>  62
<211>  26
<212>  DNA
<213>  Artificial sequence

<220>
<223>  partial Cyrano lncRNA from Chicken

<400>  62
aaggagggga agatggcgga gtgaga                                            26


<210>  63
<211>  26
<212>  DNA
<213>  Artificial sequence

<220>
<223>  partial Cyrano lncRNA from Frog

<400>  63
aaagggtgga agatggcggc gtgaag                                            26


<210>  64
<211>  26
<212>  DNA
<213>  Artificial sequence

<220>
<223>  partial Cyrano lncRNA from Fugu

<400>  64
agcagagcga aaatggcgta gagcga                                            26


<210>  65
<211>  26
<212>  DNA
<213>  Artificial sequence

<220>
<223>  partial Cyrano lncRNA from Tetraodon

<400>  65
agcagaacga aaatggcgta gaacga                                            26


<210>  66
<211>  26
<212>  DNA
<213>  Artificial sequence

<220>
<223>  partial Cyrano lncRNA from Medaka

<400>  66
cgcggagcaa agatggcgta gagcgg                                            26


<210>  67
<211>  26
<212>  DNA
<213>  Artificial sequence

<220>
<223>  partial Cyrano lncRNA from Zebrafish

<400>  67
cacgggaccg aaatggcgta acgcgc                                            26


<210>  68
<211>  360
<212>  RNA
<213>  Artificial sequence

<220>
<223>  CHASERR nucleic acid sequence

<400>  68
gaguuucaaa uggacccuac cacugagaaa ucaagauggc agucuacuau ggggaauuga       60

ggaaaaaugg auuaauacaa gaguccugug auaauauaca accaagacag gguucuuuua      120

acauggauuc caugcaguga augaagacau agguuucuua cccaacacaa auggacagug      180

gauuugacuu ucuaaagacu uuuuuugugg acauuuugac auuuggagaa gaaagauggc      240

acacuaaccc agauaauagu uuuuaugccu ggaauuuuuu gcaguuugau uuguaugcgu      300

augaccucuu gaaauguuaa uuuuuaauaa aauuuguaac acuuaaaaau uucucaguuu      360


<210>  69
<211>  1705
<212>  DNA
<213>  Artificial sequence

<220>
<223>  PUM1 3' UTR nucleic acid sequence

<400>  69
ggcaguguca cccgcuguuc ccucauuccc gcugaccuca cuggcccacu ggcaaaucca       60

accagcaacc agaaauguuc uaguguagag ucugagacgg gcaagugguu gcuccaggau      120

uacucccucc uccaaaaaag gaaucaaauc cacgagugga aaagccuuug uaaauuuaau      180

uuuauuacac auaacaugua cuauuuuuuu uaauugacua auugcccugc uguuuuacug      240

guguauagga uacuuguaca uagguaacca auguacaugg gaggccacau auuuuguuca      300

cuguuguauc uauauuucac auguggaaac uuucagggug guugguuuaa caaaaaaaaa      360

aagcuuuaaa aaaaaaagaa aaaaaggaaa agguuuuuag cucauuugcc uggccggcaa      420

guuuugcaaa uagcucuucc ccaccuccuc auuuuaguaa aaaacaaaca aaaacaaaaa      480

aaccugagaa guuugaauug uaguuaaaug accccaaacu ggcauuuaac acuguuuaua      540

aaaaatatat atatatatat atatatatat aaugaaaaag guuucagagu ugcuaaagcu      600

ucaguuugug acauuaaguu uaugaaauuc uaaaaaaugc cuuuuuugga gacuauauua      660

ugcugaagaa ggcuguucgu gaggaggaga ugcgagcacc cagaacgucu uuugaggcug      720

ggcgggugug auuguuuacu gccuacugga uuuuuuucua uuaacauuga aagguaaaau      780

cugauuauuu agcaugagaa aaaaaaaucc aacucugcuu uuggucuugc uucuauaaau      840

auauagugua uacuuggugu agacuuugca uauauacaaa uuuguaguau uuucuuguuu      900

ugaugucuaa ucuguaucua uaauguaccc uaguagucga acauacuuuu gauuguacaa      960

uuguacauuu guauaccugu aauguaaaug uggagaaguu ugaaucaaca uaaacacguu     1020

uuuugguaag aaaagagaau uagccagccc ugugcauuca guguauauuc ucaccuuuua     1080

uggucguagc auauaguguu guauauugua aauuguaauu ucaaccagaa guaaauuuuu     1140

uucuuuugaa ggaauaaaug uucuuuauac agccuaguua auguuuaaaa agaaaaaaau     1200

agcuugguuu uauuugucau cuagucucaa guauagcgag auucuuucua aauguuauuc     1260

aagauugagu ucucacuagu guuuuuuuaa uccuaaaaaa guaauguuuu gauuuuguga     1320

cagucaaaag gacgugcaaa agucuagccu ugcccgagcu uuccuuacaa ucagagcccc     1380

ucucaccuug uaaaguguga aucgcccuuc ccuuuuguac agaagaugaa cuguauuuug     1440

cauuuugucu acuuguaagu gaauguaaca uacugucaau uuuccuuguu ugaauauaga     1500

auuguaacac uacacggugu acauuuccag agccuugugu auauuuccaa ugaacuuuuu     1560

ugcaagcaca cuuguaacca uauguguaua auuaacaaac cuguguaugc uuaugccugg     1620

gcaacuauuu uuuguaacuc uuguguagau ugucucuaaa caauguguga ucuuuauuuu     1680

gaaaaauaca gaacuuugga aucug                                           1705


<210>  70
<211>  2893
<212>  DNA
<213>  Artificial sequence

<220>
<223>  PUM1 3' UTR nucleic acid sequence

<400>  70
auuacaggag caagagaaag aagauaauuu aaccauguga aaagaauuuu uuugugugug       60

aauuaucaaa acacaacuca acuaugaauc uucaauuuuu uuuuaaagca aaacuauuua      120

uugacuuuau ucauccauuu guaaauuuuu uaagguucuu guguauauuu gggggguggg      180

ggaugaauua uaaauuauau ucagcccuga guggagaccu aucagauugg auugcuggca      240

aagcacagaa ugccuguaua ugauguaacu guaucaaaaa uaaaaagcug ucacauauuu      300

uguaaauuuu uaccuuguaa agucacaaaa auaguuuuua aaggaaaaag uacaguauuc      360

uuuuaauaaa cuggcucaca gucugguagg ucuacaaccc cauagcacaa cagguuuaua      420

gagauguaua uagaauuaua guccuuauuu uuuuccuuug cgugaaaccu uuuauaacag      480

auuaacaauc aacugcataa atattattaa tattttaaaa agaguuaagu uguauuuuga      540

uaauucacaa acuaucaugc aaauaacgag uaaguagaca agaauaaagu gguuugagau      600

gaaaagaacc uaacauuauu uacaguagau gugguuuuaa uacaauuacu gcccuaaaau      660

gucucuggca auguacagaa auauuguaua uacuuacaua uguaauuguu guaagaguua      720

aauacaaaau cauggugaca cuuccaauua agugcacuaa augaaaaguu aagucacuua      780

uuaacuuuuc aguuugguuu gcaaugagaa agaguggaaa uuuguauuuu guuuugcuua      840

uagaauuaca gacauguuga ggaaguguug agcuuuauuu ugcuuuuuca uagaggcaga      900

aaguaggaac cagauagaga ugaaaagggg ccacugaaaa gugaauuuga uagcucagca      960

uuuaagcaug auuacauauu cagauagcuc uuuuugcuuu cuauaaauau augcauugug     1020

uguguaguaa uagauguaag uuuacacuuu gaaaggaaau cuuguuucaa uguuuauuau     1080

aaaagccuug cuaauuuagu agugaugcuu uccuugguug uacaggugua cauuuguaaa     1140

ccuucaugcu guaaauggaa uuuguuuuau cucuuuggga uacauuugca uuuuagugua     1200

cauuuacguc ccugcccucu uugaccuggc aauauagugu uguauaaugu aaauuuauuu     1260

cuccaaaucg agagugattt tttaaaaatt ttttatcttt atatgguuuc agaaguauga     1320

accagcuuuc uuuuuauuau ugugagauca uuuuguuuua uaacauaguu guugacuguu     1380

aauauggacc ugcuagaauu uggaucacuu ucaauugaag ucaggguauu gugcauaaua     1440

gaaaguauug gacugagaua uuugguuacc auggaggcca augcuuuuuu caucuuauua     1500

aaugugaugu gacuuuuuuc uuuguacaga agaguacugu auuuuugaau agccuacucc     1560

caaguaagag caaaucugua ugauaacauu uuuuccucug gacauaagac auaacaguaa     1620

cacgauguac auuuacaagc ggccuuaugu acauuuccca acaaucuuuu uaaggcaaaa     1680

uugugaccau auguguauaa uuaaaaucgu uuuuaauccu uugccuauga aaauauuuug     1740

gaaaaaaacu ugcuguguau auucaguuuc ugaaagauaa agaaagugcu uuguauuuug     1800

uugaagucag uauuuuguau aaacauuuau guugacccac uuauguucag ugcugaaaac     1860

uaaaaugaac augcuauucu gucagcugaa uauggaagag aucuuuuuuu acuagagauc     1920

ugcagaagaa acgcaaucuu cugagcacaa uauggaaucu aaagguuuua ucacuuaguu     1980

guucauauua ugaaccuaaa aauaauggca uaaaguuugg ggaugccagg cauacuuuuu     2040

cauguuuggu guugaguuau uuuacuuuuc uaacccaaca uuccuuggug agaccauuaa     2100

auccaaacac uugucaccgu uccuucucau agucacucug ggucaucagc augucccagu     2160

cacugcagca acgccuugug uuuguuucau uuuuuuaaaa cccacacaaa gccgcugucu     2220

cacuuuuucc uacuuuacca accucagagu auuucggccc guaucgaacu uuuguucuca     2280

guaucagccc augguuucag gaucaaagcu gucauguugg agauugguaa uggcuuuccu     2340

gucuuuguac aguugaauuc cuagucuucc uucauccuug cccucuguug gcacaggcau     2400

uaucucugca auuuuagaaa augacaagua gagaauacua cauugagaaa cuaaacccuc     2460

uucuuggggu ccugauacuc auucccauuu gucccagugc ugacaaccca aucuucccaa     2520

uacuuucagg ccugcucuac aaaaguaccu guucuuguag aaauuuuaca gucugccauu     2580

uugggugccc accccaauuu uuaccuuuua guaaguuggc augaaauuuu gguaaaaucu     2640

gaaaaucaca uuucagaaua aaacaauugg gcaaaacuac cuaggcuuua cucuugagug     2700

ucuccuuuug auagggauug uuucuggacc aguuugucua aguccuggcu cuuauugguu     2760

cauaugaaau aauguuaacu ucacuucuuu guauauuaug uauaaauuag aaaaugaaaa     2820

augugugaau aacauuguau gaaauaaacc uggucuugug uuuuucucua gauaaaauac     2880

cccucuguac cuc                                                        2893


<210>  71
<211>  2201
<212>  DNA
<213>  Homo sapiens

<400>  71
acgcgcagcc acaggaccuc ugggcccggc cuucaggggc gcuccccgcc ccgggcuucc       60

ccgcggaagg gaguggggcg cgcguaccca gcugaggggc aggguccgac ccgaggccgu      120

gugcaaaugc auccuucgcg gacucuuugu gugucugagc gcggcuccgc gccgccgcag      180

gcaccauuuu cugcuucgcu caggacaggc acauaaaagg aaggcggcug ccgcccgucg      240

ccguccucuu uuccucagau gcccucugcu gcagguguag agaggagaga gagugaacag      300

ggagcggggc uuuugucugu uggucucccu ggacugaaga gagggagaau agaagcccaa      360

gacuaagauu cucaaaaugg uuuauuaccc agaacucuuu gucuggguca gucaagaacc      420

auuuccaaac aaggacaugg agggaaggcu uccuaaggga agacuuccug ucccaaagga      480

agugaaccgc aagaagaacg augagacaaa cgcugccucc cugacuccac ugggcagcag      540

ugaacuccgc uccccaagaa ucaguuaccu ccacuuuuuu uaaucguaac accuccauuu      600

guauuacaua ugguguaugg guauugauga ggucauggua ucauauaugg gauuuuuuuc      660

uguguaaauc aucaaguaua agaagaaacu augggacucu gagccuugcu uuagagaauu      720

uacaguggac aaauaggugu caucaaacca guuuuuaauc auucugacuc aagugaaaac      780

gcucagaauu ucacacugug aauccacguu uacaacccuu acaggugggc cuucaggccu      840

gguucgcuac aacaaugucu uccacaacuc aaacucccac cgcgcucaca caaccggucc      900

acuccugccu uuucacucac acagcucccg acugcuucuu gcagaggcug agaguccccc      960

ccccaccuuu uuuuucauuu agauguaaca aaccuaguag uuuauguuca ucaauugucu     1020

guauaucucu auauuuuauc cauguacucu uuugauguau agaaguaguu ugaaacucau     1080

uguuuccuug ugguaaguga ccgagaugcu gccacaggac cugagacacu gaugaauggu     1140

gcuauuuugg acuuucaaca ugcuccuugg cgagguagcu cugauggagu uauuuuuuau     1200

uuccauguuc uaagaaggug uugguacucu guuucccuga auguuguucu cuagacugga     1260

uugacuuguu uuccuugugu cuucagugug gcuuucuucc ucaguguugu agguugagcg     1320

aaugcuacca gagugugaga gaccauuguc ucguuggcug gcgcucacgg acaugcaguc     1380

acgguagcgg gagcaaucac aaaacuguaa uuuacuuacc aaaucucuuc cuuuccguag     1440

ccucgccugc cugacuuaga gaaagaaaag caauaauuuu acaggcauuu ugaggugucu     1500

cuuuggguuc uuucuguuug aaaggauauu ugucgaaaaa aagagcaaaa ccguuuuaaa     1560

uaaacucccc cuggaaaaaa acccaaaaca cuggcaucug agugggaaua ugaaaaugac     1620

accuuuucca aauauuaaau uggaaaacaa ggucuacaaa aucaugauac uuuuuuaaaa     1680

ggcagagcau ucuuuuuucg gcaauuuuga uaagcaaggu guagauuuac auuuuugucc     1740

uugcucccaa cgaaauggau aaacaaaaau aaauuaccau cuacucaugg aauguuguug     1800

uguuagccag ucugaaagcc caccuuaauu uuuauauaac ugucuuuagc ucuucuuuug     1860

acagggcagg ccuuguucug aacuguuucg cuucugacug uuaaacaccg augacgcaug     1920

cacugcacuu cuucguuuuc uucuugcucc cccauuggcc ugaguuucuu gugcauuacu     1980

ccucucccuc cuucguuaga auagguauau cagcugugua aauagagcaa gaaaacagua     2040

uucugcaucu guggcauuua uguagaguug caguugugua cugcugaaaa ugcaggcuuu     2100

uguaacagug ugaucuuuac ugaugcacuc augacaagua cccaauguau uuuagcuauu     2160

uuaguaguau uuguucaaua aauacgcaag cuguaaggua a                         2201


<210>  72
<211>  331
<212>  DNA
<213>  Mus musculus

<400>  72
caccccgcuu gaagaguuug aaauggacuu uaccacugag aaaucaagau ggcagcccau       60

uauggggaau ugaggaaaau ggauuaaugc aagaaugcug uaauauuaua caaccaacac      120

aggauucuuu uaauguggau uccaugaaau gaaugauucu uacccaacac aaauggacag      180

uggaauuuac uuccuaaaga cuuguuacau gucauguaca uuuuugacau cuggagaaga      240

cucuacaauu cuacaaaugg uaguuuguau uccuggaauu ucuugcaguu ugaucugaag      300

ugaccuuaug gaauguuaac uuuaauaaaa u                                     331


<210>  73
<211>  4269
<212>  DNA
<213>  Homo sapiens

<400>  73
aaccgcuuuu uaaaauucaa aacaagaaac aaaacaaaaa aaauuaaggg gaaaauuauu       60

uaaaucggaa aggaagacuu aaaguuguua gugaguggaa ugaauugaag gcagaauuua      120

aaguuugguu gauaacagga uagauaacag aauaaaacau uuaacauaug uauaaaauuu      180

uggaacuaau uguaguuuua guuuuuugcg caaacacaau cuuaucuucu uuccucacuu      240

cugcuuuguu uaaaucacaa gagugcuuua augaugacau uuagcaagug cucaaaauaa      300

uugacagguu uuguuuuuuu uuuuuugagu uuaugucagc uuugcuuagu guuagaaggc      360

cauggagcuu aaaccuccag cagucccuag gaugauguag auucuucucc aucucuccgu      420

gugugcagua gugccagucc ugcaguaguu gauaagcuga auagaaagau aagguuuucg      480

agaggagaag ugcgccaaug uugucuuuuc uuuccacguu auacugugua aggugauguu      540

cccggucgcu guugcaccug auaguaaggg acagauuuuu aaugaacauu ggcuggcaug      600

uuggugaauc acauuuuagu uuucugaugc cacauagucu ugcauaaaaa aggguucuug      660

ccuuaaaagu gaaaccuuca uggauagucu uuaaucucug aucuuuuugg aacaaacugu      720

uuuacauucc uuucauuuua uuaugcauua gacguugaga cagcgugaua cuuacaacuc      780

acuaguauag uuguaacuua uuacaggauc auacuaaaau uucugucaua uguauacuga      840

agacauuuua aaaaccagaa uauguagucu acggauauuu uuuaucauaa aaaugaucuu      900

uggcuaaaca ccccauuuua cuaaaguccu ccugccaggu aguucccacu gauggaaaug      960

uuuauggcaa auaauuuugc cuucuaggcu guugcucuaa caaaauaaac cuuagacaua     1020

ucacaccuaa aauaugcugc agauuuuaua auugauuggu uacuuauuua agaagcaaaa     1080

cacagcaccu uuacccuuag ucuccucaca uaaauuucuu acuauacuuu ucauaauguu     1140

gcaugcauau uucaccuacc aaagcugugc uguuaaugcc gugaaaguuu aacguuugcg     1200

auaaacugcc guaauuuuga uacaucugug auuuagguca uuaauuuaga uaaacuagcu     1260

cauuauuucc aucuuuggaa aaggaaaaaa aaaaaaacuu cuuuaggcau uugccuaagu     1320

uucuuuaauu agacuuguag gcacucuuca cuuaaauacc ucaguucuuc uuuucuuuug     1380

caugcauuuu uccccuguuu ggugcuaugu uuauguauua ugcuugaaat tttaattttt     1440

ttttttttgc acuguaacua uaauaccucu uaauuuaccu uuuuaaaagc ugugggucag     1500

ucuugcacuc ccaucaacau accaguagag guuugcugca auuugccccg uuaauuaugc     1560

uugaaguuua agaaagcuga gcagaggugu cucauauuuc ccagcacaug auucugaacu     1620

ugaugcuucg uggaaugcug cauuuauaug uaagugacau uugaauacug uccuuccugc     1680

uuuaucugca ucauccaccc acagagaaau gccucugugc gagugcaccg acagaaaacu     1740

gucagcucug cuuucuaagg aacccugagu gaggggggua uuaagcuucu ccaguguuuu     1800

uuguugucuc caaucuuaaa cuuaaauuga gaucuaaauu auuaaacgag uuuuugagca     1860

aauuagguga cuuguuuuaa aaauauuuaa uuccgauuug gaaccuuaga ugucuauuug     1920

auuuuuuaaa aaaccuuaau guaagauaug accaguuaaa acaaagcaau ucuugaauua     1980

uauaacugua aaagugugca guuaacaagg cuggauguga auuuuauucu gagggugauu     2040

ugugaucaag uuuaaucaca aaucucuuaa uauuuauaaa cuaccugaug ccaggagcuu     2100

agggcuuugc auugugucua auacauugau cccaguguua cgggauucuc uugauuccug     2160

gcaccaaaau cagauuguuu ucacaguuau gauucccagu gggagaaaaa ugccucaaua     2220

uauuuguaac cuuaagaaga guauuuuuuu guuaauacua agauguucaa acuuagacau     2280

gauuagguca uacauucuca gggguucaaa uuuccuucua ccauucaaau guuuuaucaa     2340

cagcaaacuu cagccguuuc acuuuuuguu ggagaaaaau aguagauuuu aauuugacuc     2400

acaguuugaa gcauucugug auccccuggu uacugaguua aaaaauaaaa aaguacgagu     2460

uagacauaug aaaugguuau gaacgcuuuu gugcugcuga uuuuuaaugc uguaaaguuu     2520

uccuguguuu agcuuguuga aauguuuugc aucugucaau uaaggaaaaa aaaaaucacu     2580

cuauguugcc ccacuuuaga gcccugugug ccacccugug uuccugugau ugcaauguga     2640

gaccgaaugu aauauggaaa accuaccagu gggguguggu ugugcccuga gcacgugugu     2700

aaaggacugg ggaggcgugu cuugaaaaag caacugcaga aauuccuuau gaugauugug     2760

ugcaaguuag uuaacaugaa ccuucauuug taaatttttt aaaatttctt ttataatatg     2820

cuuuccgcag uccuaacuau gcugcguuuu auaauagcuu uuucccuucu guucuguuca     2880

uguagcacag auaagcauug cacuugguac caugcuuuac cucauuucaa gaaaauaugc     2940

uuaacagaga ggaaaaaaau gugguuuggc cuugcugcug uuuugauuua uggaauuuga     3000

aaaagauaau uauaaugccu gcaauguguc auauacucgc acaacuuaaa uaggucauuu     3060

uugucugugg cauuuuuacu guuugugaaa guaugaaaca gauuuguuaa cugaacucuu     3120

aauuauguuu uuaaaauguu uguuauauuu cuuuucuuuu uucuuuuaua uuacgugaag     3180

ugaugaaauu uagaaugacc ucuaacacuc cuguaauugu cuuuuaaaau acugauauuu     3240

uuauuuguua auaauacuuu gcccucagaa agauucugau acccugccuu gacaacauga     3300

aacuugaggc ugcuuugguu caugaaucca gguguucccc cggcagucgg cuucuucagu     3360

cgcucccugg aggcaggugg gcacugcaga ggaucacugg aauccagauc gagcgcaguu     3420

caugcacaag gccccguuga uuuaaaauau uggaucuugc ucuguuaggg ugucuaaucc     3480

cuuuacacaa gauugaagcc accaaacuga gaccuugaua ccuuuuuuua acugcaucug     3540

aaauuauguu aagagucuuu aacccauuug cauuaucugc agaagagaaa cucaugucau     3600

guuuauuacc uauaugguug uuuuaauuac auuugaauaa uuauauuuuu ccaaccacug     3660

auuacuuuuc aggaauuuaa uuauuuccag auaaauuucu uuauuuuaua uuguacauga     3720

aaaguuuuaa agauauguuu aagaccaaga cuauuaaaau gauuuuuaaa guuguuggag     3780

acgccaauag caauaucuag gaaauuugca uugagaccau uguauuuucc acuagcagug     3840

aaaaugauuu uucacaacua acuuguaaau auauuuuaau cauuacuucu uuuuuucuag     3900

uccauuuuua uuuggacauc aaccacagac aauuuaaauu uuauagaugc acuaagaauu     3960

cacugcagca gcagguuaca uagcaaaaau gcaaagguga acaggaagua aauuucuggc     4020

uuuucugcug uaaauaguga aggaaaauua cuaaaaucaa guaaaacuaa ugcauauuau     4080

uugauugaca auaaaauauu uaccaucaca ugcugcagcu guuuuuuaag gaacaugaug     4140

ucauucauuc auacaguaau caugcugcag aaauuugcag ucugcaccuu auggaucaca     4200

auuaccuuua guuguuuuuu uuguaauaau uguagccaag uaaaucucca auaaaguuau     4260

cgucuguuc                                                             4269


<210>  74
<211>  11
<212>  RNA
<213>  Artificial Sequence

<220>
<223>  Algorithm derived nucleic acid sequences

<400>  74
auuuuuuuca g                                                            11


<210>  75
<211>  536
<212>  RNA
<213>  Artificial Sequence

<220>
<223>  Algorithm derived nucleic acid sequences

<400>  75
auugcucgag acguguaacc ccauccagau acugaugccu gcagugaaug aauuacugac       60

ugugaacgau ugcuuagauc gugcuauacu gauacaucca augccugcca ggucugauga      120

uuacgcauau gaaucaucca agcgugcgca ccugauggca aucugacugc augaaucgga      180

agacugucua gugguuuacu gauuauugcu gagacuacga gcauacaucc aacuugcaau      240

uuagcuugac gcucccacgc augaauaagc gucauccauc gcacgugcaa ucugaugccg      300

uugacuauga aucugcgcac ugacuguaaa cuguguauug cucaugcgaa uguauccauc      360

caaacggauc guacuguggu uuacgcuauu ggaugaauca aucgaugcca uccaacagau      420

gacccaugac uugaugauac cgauaugaau gacugacugu cugcauacuu uugcucauug      480

cuuguacuaa cggaucguac agcauccauu ucacugaagg cacgacugug guuuac          536


<210>  76
<211>  21
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Algorithm derived nucleic acid sequences

<400>  76
auugcucgag acguguaacc c                                                 21


<210>  77
<211>  26
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Algorithm derived nucleic acid sequences

<400>  77
auugcuuaga ucgugcuaua cugaua                                            26


<210>  78
<211>  26
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Algorithm derived nucleic acid sequences

<400>  78
auugcuuaga ucgugcuaua cugaua                                            26


<210>  79
<211>  21
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Algorithm derived nucleic acid sequences

<400>  79
uauugcucau gcgaauguau c                                                 21


<210>  80
<211>  62
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Algorithm derived nucleic acid sequences

<400>  80
uugcucauug cuuguacuaa cggaucguac aguuucacug aaggcacgac ugugguuuac       60

ac                                                                      62


<210>  81
<211>  15
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Algorithm derived nucleic acid sequences

<400>  81
uacugacugu gaacg                                                        15


<210>  82
<211>  23
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Algorithm derived nucleic acid sequences

<400>  82
cggaagacug ucuagugguu uac                                               23


<210>  83
<211>  23
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Algorithm derived nucleic acid sequences

<400>  83
cugcgcacug acuguaaacu gug                                               23


<210>  84
<211>  20
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Algorithm derived nucleic acid sequences

<400>  84
gacugacugu cugcauacuu                                                   20


<210>  85
<211>  582
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Algorithm derived nucleic acid sequences

<400>  85
cgaagagucu agaucaguaa cacacagaua ccgaugacug auaaacugua gacuauuagg       60

agauggcgac aauccaagcg uuuagaucag uaacacacac augccguuga cugccggagg      120

uuagacuauu aggauguggu cgacuaccag cguuagguuc aguaacacuu acaugccugc      180

cggacuacgu acucugacua uuagcaugac ugugguuuac uugcggaugu ccaguaacug      240

auuacuugca auguacugcc ggaacuugua cuucuauuag uuugacugug aguaacgauu      300

acuugcaaug uacaguaacu gccggaacgg aucguacuuu guacgcuauu aggcacgacu      360

gugcagcugc aauguacagu aacugccgga acgguuugua cguauuaggc acgacugugg      420

uuuacgcuau uagauccgau ggagccagaa guaacgccuu augaugauac cauaacugca      480

uacuauuagc cuagauggca uacacaugac uuaauaggcg aguaguaacu ccuaaugauu      540

gccgaugcga ugauaacugc auacgauuca ccuaguuaug gc                         582


<210>  86
<211>  24
<212>  RNA
<213>  Artificial sequence

<220>
<223>  conservation scoring of Fig 8A element 1


<220>
<221>  misc_feature
<222>  (1)..(1)
<223>  N= A, G OR U

<220>
<221>  misc_feature
<222>  (2)..(3)
<223>  n is a, c, g, or u

<220>
<221>  misc_feature
<222>  (4)..(4)
<223>  N= A OR U

<220>
<221>  misc_feature
<222>  (5)..(5)
<223>  n is a, c, g, or u

<220>
<221>  misc_feature
<222>  (6)..(6)
<223>  N= A, G OR U

<220>
<221>  misc_feature
<222>  (7)..(7)
<223>  n is a, c, g, or u

<220>
<221>  misc_feature
<222>  (8)..(8)
<223>  N= A, C OR G

<220>
<221>  misc_feature
<222>  (15)..(15)
<223>  N= A OR G

<220>
<221>  misc_feature
<222>  (16)..(16)
<223>  N= A , C, OR U

<220>
<221>  misc_feature
<222>  (17)..(17)
<223>  N= A, C OR G

<220>
<221>  misc_feature
<222>  (18)..(18)
<223>  n is a, c, g, or u

<220>
<221>  misc_feature
<222>  (19)..(19)
<223>  N= C, G OR U

<220>
<221>  misc_feature
<222>  (20)..(21)
<223>  n is a, c, g, or u

<220>
<221>  misc_feature
<222>  (22)..(22)
<223>  N= A , C, OR U

<220>
<221>  misc_feature
<222>  (23)..(24)
<223>  n is a, c, g, or u

<400>  86
nnnnnnnnaa gaugnnnnnn nnnn                                              24


<210>  87
<211>  27
<212>  RNA
<213>  Artificial sequence

<220>
<223>  conservation scoring of Fig 8A element 2


<220>
<221>  misc_feature
<222>  (1)..(1)
<223>  N= A, G OR C

<220>
<221>  misc_feature
<222>  (3)..(3)
<223>  N= U OR A

<220>
<221>  misc_feature
<222>  (4)..(4)
<223>  n is a, c, g, or u

<220>
<221>  misc_feature
<222>  (5)..(5)
<223>  N= G, U OR C

<220>
<221>  misc_feature
<222>  (6)..(6)
<223>  n is a, c, g, or u

<220>
<221>  misc_feature
<222>  (7)..(7)
<223>  N= G, A OR U

<220>
<221>  misc_feature
<222>  (8)..(8)
<223>  N= G, U OR C

<220>
<221>  misc_feature
<222>  (9)..(9)
<223>  N= A, G OR C

<220>
<221>  misc_feature
<222>  (10)..(10)
<223>  N= A OR U

<220>
<221>  misc_feature
<222>  (18)..(18)
<223>  N= U, C OR G

<220>
<221>  misc_feature
<222>  (19)..(20)
<223>  N= U, A OR G

<220>
<221>  misc_feature
<222>  (21)..(21)
<223>  N= A OR U

<220>
<221>  misc_feature
<222>  (22)..(22)
<223>  N= U, C OR G

<220>
<221>  misc_feature
<222>  (23)..(23)
<223>  N= A, G OR C

<220>
<221>  misc_feature
<222>  (24)..(24)
<223>  N= A, C OR G

<220>
<221>  misc_feature
<222>  (25)..(25)
<223>  n is a, c, g, or u

<220>
<221>  misc_feature
<222>  (26)..(26)
<223>  N= A OR U

<220>
<221>  misc_feature
<222>  (27)..(27)
<223>  N= U, A OR G

<400>  87
nannnnnnnn aaauggannn nnnnnnn                                           27


<210>  88
<211>  331
<212>  DNA
<213>  Artificial sequence

<220>
<223>  WT sequence of Mouse Chaserr Exon 5

<400>  88
caccccgctt gaagagtttg aaatggactt taccactgag aaatcaagat ggcagcccat       60

tatggggaat tgaggaaaat ggattaatgc aagaatgctg taatattata caaccaacac      120

aggattcttt taatgtggat tccatgaaat gaatgattct tacccaacac aaatggacag      180

tggaatttac ttcctaaaga cttgttacat gtcatgtaca tttttgacat ctggagaaga      240

ctctacaatt ctacaaatgg tagtttgtat tcctggaatt tcttgcagtt tgatctgaag      300

tgaccttatg gaatgttaac tttaataaaa t                                     331


<210>  89
<211>  331
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Mouse Chaserr Exon 5 with four ATGG->TACC mutations. All four are
       located within conserved motif identified by LncLOOM

<400>  89
caccccgctt gaagagtttg aaatggactt taccactgag aaatcaagta cccagcccat       60

ttaccggaat tgaggaaata ccattaatgc aagaatgctg taatattata caaccaacac      120

aggattcttt taatgtggat tccatgaaat gaatgattct tacccaacac aataccacag      180

tggaatttac ttcctaaaga cttgttacat gtcatgtaca tttttgacat ctggagaaga      240

ctctacaatt ctacaaatgg tagtttgtat tcctggaatt tcttgcagtt tgatctgaag      300

tgaccttatg gaatgttaac tttaataaaa t                                     331


<210>  90
<211>  331
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Mouse Chaserr Exon 5 with all ATGG sites mutated to TACC. In 
       total 7 ATGG->TACC mutations.

<400>  90
caccccgctt gaagagtttg aataccactt taccactgag aaatcaagta cccagcccat       60

ttaccggaat tgaggaaata ccattaatgc aagaatgctg taatattata caaccaacac      120

aggattcttt taatgtggat tccatgaaat gaatgattct tacccaacac aataccacag      180

tggaatttac ttcctaaaga cttgttacat gtcatgtaca tttttgacat ctggagaaga      240

ctctacaatt ctacaatacc tagtttgtat tcctggaatt tcttgcagtt tgatctgaag      300

tgacctttac caatgttaac tttaataaaa t                                     331


<210>  91
<211>  22
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Antisense Oligonucleotide

<400>  91
ctctctctct ttctatccct tc                                                22


<210>  92
<211>  20
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Antisense Oligonucleotide

<400>  92
ccataatggg ctgccatctt                                                   20


<210>  93
<211>  18
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Antisense Oligonucleotide

<400>  93
gcattaatcc attttcct                                                     18


<210>  94
<211>  18
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Antisense Oligonucleotide

<400>  94
ttccactgtc catttgtg                                                     18


<210>  95
<211>  15
<212>  DNA
<213>  Artificial sequence

<220>
<223>  locked nucleic acid (LNA) gapmers

<400>  95
aacacgtcta tacgc                                                        15


<210>  96
<211>  16
<212>  DNA
<213>  Artificial sequence

<220>
<223>  locked nucleic acid (LNA) gapmers

<400>  96
atagcgtgca taaatt                                                       16


<210>  97
<211>  16
<212>  DNA
<213>  Artificial sequence

<220>
<223>  locked nucleic acid (LNA) gapmers

<400>  97
gcagaatgaa gacaaa                                                       16


<210>  98
<211>  16
<212>  DNA
<213>  Artificial sequence

<220>
<223>  locked nucleic acid (LNA) gapmers

<400>  98
atcaatgaat tcacat                                                       16


<210>  99
<211>  16
<212>  DNA
<213>  Artificial sequence

<220>
<223>  locked nucleic acid (LNA) gapmers

<400>  99
caacgactga tcctaa                                                       16


<210>  100
<211>  22
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Single strand DNA oligonucleotide

<400>  100
gccattttga agactgagac ca                                                22


<210>  101
<211>  20
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Single strand DNA oligonucleotide

<400>  101
tctatggtgc aggcctttca                                                   20


<210>  102
<211>  24
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Single strand DNA oligonucleotide

<400>  102
tgacatctgg agaagactct acaa                                              24


<210>  103
<211>  22
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Single strand DNA oligonucleotide

<400>  103
aggtcacttc agatcaaact gc                                                22


<210>  104
<211>  20
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Single strand DNA oligonucleotide

<400>  104
ggagatcata gaacgggcca                                                   20


<210>  105
<211>  23
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Single strand DNA oligonucleotide

<400>  105
aaaagggttt gagttggatc ttc                                               23


<210>  106
<211>  20
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Single strand DNA oligonucleotide

<400>  106
ttgggtatgg aatcctgtgg                                                   20


<210>  107
<211>  20
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Single strand DNA oligonucleotide

<400>  107
cttctgcatc ctgtcagcaa                                                   20


<210>  108
<211>  19
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Single strand DNA oligonucleotide

<400>  108
gtcggtgtga acggatttg                                                    19


<210>  109
<211>  20
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Single strand DNA oligonucleotide

<400>  109
gaatttgccg tgagtggagt                                                   20


<210>  110
<211>  20
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Single strand DNA oligonucleotide

<400>  110
gttaccagcc caaacctcaa                                                   20


<210>  111
<211>  20
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Single strand DNA oligonucleotide

<400>  111
cacttgtggg gagaccttgt                                                   20


<210>  112
<211>  36
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Single strand DNA oligonucleotide

<400>  112
taatacgact cactataggg caccccgctt gaagag                                 36


<210>  113
<211>  28
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Single strand DNA oligonucleotide

<400>  113
aagttaacat tccataaggt cacttcag                                          28


<210>  114
<211>  48
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Single strand DNA oligonucleotide

<400>  114
taatacgact cactataggg aagttaacat tccataaggt cacttcag                    48


<210>  115
<211>  16
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Single strand DNA oligonucleotide

<400>  115
caccccgctt gaagag                                                       16


<210>  116
<211>  36
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Single strand DNA oligonucleotide

<400>  116
taatacgact cactataggg caccccgctt gaagag                                 36


<210>  117
<211>  28
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Single strand DNA oligonucleotide

<400>  117
aagttaacat tggtaaaggt cacttcag                                          28


<210>  118
<211>  48
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Single strand DNA oligonucleotide

<400>  118
taatacgact cactataggg aagttaacat tggtaaaggt cacttcag                    48


<210>  119
<211>  16
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Single strand DNA oligonucleotide

<400>  119
caccccgctt gaagag                                                       16


<210>  120
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  recognition sequence amino acid sequence

<400>  120

Leu Ala Gly Leu Ile Asp Ala Asp Gly 
1               5                   


<210>  121
<211>  6
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  recognition sequence amino acid sequence

<400>  121

Gly Ile Tyr Tyr Ile Gly 
1               5       


<210>  122
<211>  9
<212>  RNA
<213>  Artificial sequence

<220>
<223>  element that inhibits binding of CHD2 to Chaserr

<400>  122
uuuuuaccu                                                                9


<210>  123
<211>  28
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Human Chaserr target sequence

<400>  123
aagggguauc aucugacggu agaacuaa                                          28


<210>  124
<211>  28
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Mouse Chaserr target sequence

<400>  124
aagggguauu acccgacggu agaacuaa                                          28


<210>  125
<211>  22
<212>  RNA
<213>  Artificial sequence

<220>
<223>  antisense oligonucleotide (ASO)


<220>
<221>  misc_feature
<222>  (1)..(22)
<223>  O-methoxy-ethyl (MOE) base  (2'MOE)

<220>
<221>  misc_feature
<222>  (1)..(22)
<223>  Phosphorothioate bonds

<400>  125
cgauagcagg agaagucuga ag                                                22


<210>  126
<211>  22
<212>  RNA
<213>  Artificial sequence

<220>
<223>  antisense oligonucleotide (ASO)


<220>
<221>  misc_feature
<222>  (1)..(22)
<223>  Phosphorothioate bonds

<220>
<221>  misc_feature
<222>  (1)..(22)
<223>  O-methoxy-ethyl (MOE) base  (2'MOE)

<400>  126
cucucucucu uucuaucccu uc                                                22


<210>  127
<211>  20
<212>  RNA
<213>  Artificial sequence

<220>
<223>  antisense oligonucleotide (ASO)


<220>
<221>  misc_feature
<222>  (1)..(20)
<223>  Phosphorothioate bonds

<220>
<221>  misc_feature
<222>  (1)..(20)
<223>  O-methoxy-ethyl (MOE) base  (2'MOE)

<400>  127
ccauaauggg cugccaucuu                                                   20


<210>  128
<211>  20
<212>  RNA
<213>  Artificial sequence

<220>
<223>  antisense oligonucleotide (ASO)


<220>
<221>  misc_feature
<222>  (1)..(20)
<223>  O-methoxy-ethyl (MOE) base  (2'MOE)

<220>
<221>  misc_feature
<222>  (1)..(20)
<223>  Phosphorothioate bonds

<400>  128
ccauaguaga cugccaucuu                                                   20


<210>  129
<211>  20
<212>  RNA
<213>  Artificial sequence

<220>
<223>  antisense oligonucleotide (ASO)


<220>
<221>  misc_feature
<222>  (1)..(20)
<223>  O-methoxy-ethyl (MOE) base  (2'MOE)

<220>
<221>  misc_feature
<222>  (1)..(20)
<223>  Phosphorothioate bonds

<400>  129
ccauaguggg cugccaucuu                                                   20


<210>  130

<400>  130
000

<210>  131
<211>  18
<212>  RNA
<213>  Artificial sequence

<220>
<223>  antisense oligonucleotide (ASO)


<220>
<221>  misc_feature
<222>  (1)..(18)
<223>  Phosphorothioate bonds

<220>
<221>  misc_feature
<222>  (1)..(18)
<223>  2'-O-methyl RNA base (2Ome )

<400>  131
ccauaguaga cugccauc                                                     18


<210>  132
<211>  18
<212>  RNA
<213>  Artificial sequence

<220>
<223>  antisense oligonucleotide (ASO)


<220>
<221>  misc_feature
<222>  (1)..(18)
<223>  2'-O-methyl RNA base (2Ome )

<220>
<221>  misc_feature
<222>  (1)..(18)
<223>  Phosphorothioate bonds

<400>  132
auaguagacu gccaucuu                                                     18


<210>  133
<211>  20
<212>  RNA
<213>  Artificial sequence

<220>
<223>  antisense oligonucleotide (ASO)


<220>
<221>  misc_feature
<222>  (1)..(20)
<223>  Phosphorothioate bonds

<220>
<221>  misc_feature
<222>  (1)..(3)
<223>  Affinity Plus locked nucleic acid base

<220>
<221>  misc_feature
<222>  (14)..(15)
<223>  5-Methyl dC

<220>
<221>  misc_feature
<222>  (14)..(15)
<223>  n= 5-Methyl dC

<220>
<221>  misc_feature
<222>  (18)..(20)
<223>  Affinity Plus locked nucleic acid base

<220>
<221>  misc_feature
<222>  (18)..(18)
<223>  Affinity Plus locked nucleic acid base

<400>  133
ccauaguaga cugnnaucuu                                                   20


<210>  134
<211>  18
<212>  RNA
<213>  Artificial Sequence

<220>
<223>  antisense oligonucleotide (ASO)


<220>
<221>  misc_feature
<222>  (1)..(18)
<223>  Phosphorothioate bonds

<220>
<221>  misc_feature
<222>  (1)..(18)
<223>  O-methoxy-ethyl (MOE) base  (2MOE)

<400>  134
auccacuguc cauuugug                                                     18


<210>  135
<211>  18
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Chaserr GapmeR

<400>  135
gtcgaataaa ccagtatc                                                     18


<210>  136
<211>  15
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Control GapmeR

<400>  136
aacacgtcta tacgc                                                        15


<210>  137
<211>  22
<212>  RNA
<213>  Artificial sequence

<220>
<223>  antisense oligonucleotide (ASO)

<400>  137
cgauagcagg agaagucuga ag                                                22


<210>  138
<211>  22
<212>  RNA
<213>  Artificial sequence

<220>
<223>  antisense oligonucleotide (ASO)

<400>  138
cucucucucu uucuaucccu uc                                                22


<210>  139
<211>  20
<212>  RNA
<213>  Artificial sequence

<220>
<223>  antisense oligonucleotide (ASO)

<400>  139
ccauaauggg cugccaucuu                                                   20


<210>  140
<211>  20
<212>  RNA
<213>  Artificial sequence

<220>
<223>  antisense oligonucleotide (ASO)

<400>  140
ccauaguaga cugccaucuu                                                   20


<210>  141
<211>  18
<212>  RNA
<213>  Artificial sequence

<220>
<223>  antisense oligonucleotide (ASO)

<400>  141
ccauaguaga cugccauc                                                     18


<210>  142
<211>  18
<212>  RNA
<213>  Artificial sequence

<220>
<223>  antisense oligonucleotide (ASO)

<400>  142
auaguagacu gccaucuu                                                     18


<210>  143
<211>  20
<212>  RNA
<213>  Artificial sequence

<220>
<223>  antisense oligonucleotide (ASO)

<400>  143
ccauaguaga cugccaucuu                                                   20


<210>  144
<211>  18
<212>  DNA
<213>  Artificial sequence

<220>
<223>  antisense oligonucleotide (ASO)

<400>  144
auccacuguc cauuugug                                                     18


