                         SEQUENCE LISTING

<110>  DUKE UNIVERSITY
       DIAO, Yarui
       WEI, Xiaolin
       XIANG, Yu
 
<120>  COMPOSITIONS FOR AND METHODS OF CO-ANALYZING CHROMATIN STRUCTURE 
       AND FUNCTION ALONG WITH TRANSCRIPTION OUTPUT

<130>  21-2028-WO

<150>  US 63/108,565
<151>  2020-11-02

<160>  29    

<170>  PatentIn version 3.5

<210>  1
<211>  49
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic - BfaI-truseqR1-pmeI-nextera7 (adapter)


<220>
<221>  5'Phos
<222>  (1)..(1)

<400>  1
taagatcgga agagcgtcgt gtttaaacgg agatgtgtat aagagacag                   49


<210>  2
<211>  19
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic - Tn5MErev (adapter)


<220>
<221>  5'Phos
<222>  (1)..(1)

<400>  2
ctgtctctta tacacatct                                                    19


<210>  3
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic - TruseqR1(splint oligo)

<400>  3
acacgacgct cttccgatct                                                   20


<210>  4
<211>  66
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic - Nextera-pcr-i7-10-L

<400>  4
caagcagaag acggcatacg agatcagcct cggtctcgtg ggctcggaga tgtgtataag       60

agacag                                                                  66


<210>  5
<211>  70
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  NEB primer i501

<400>  5
aatgatacgg cgaccaccga gatctacact atagcctaca ctctttccct acacgacgct       60

cttccgatct                                                              70


<210>  6
<211>  70
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic - dT30VN-ME-A


<220>
<221>  misc_feature
<222>  (34)..(37)
<223>  n is a, c, g, t or u

<220>
<221>  misc_feature
<222>  (70)..(70)
<223>  n is a, c, g, t or u

<400>  6
tcgtcggcag cgtcagatgt gtataagaga cagnnnnvtt tttttttttt tttttttttt       60

ttttttttvn                                                              70


<210>  7
<211>  41
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic - NotI-TSO


<220>
<221>  5'isodG
<222>  (1)..(1)

<400>  7
gcggccgcaa gcagtggtat caacgcagag tacatrgrgr g                           41


<210>  8
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic - IS PCR

<400>  8
aagcagtggt atcaacgcag agt                                               23


<210>  9
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic - Tn5ME-A-aHiC

<400>  9
agcgtcagat gtgtataaga gacag                                             25


<210>  10
<211>  47
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic - Nextera i7

<400>  10
caagcagaag acggcatacg agatctagta cggtctcgtg ggctcgg                     47


<210>  11
<211>  51
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic - Nextera i5

<400>  11
aatgatacgg cgaccaccga gatctacacc tctctattcg tcggcagcgt c                51


<210>  12
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic - sox2-gRNA-#1-1F

<400>  12
caccggtgtc gtcttgtctt tagtc                                             25


<210>  13
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic - sox2-gRNA-#1-1R

<400>  13
aaacgactaa agacaagacg acacc                                             25


<210>  14
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic - sox2-gRNA-#1-2F

<400>  14
caccgggacc ataggttcct agagc                                             25


<210>  15
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic - sox2-gRNA-#1-2R

<400>  15
aaacgctcta ggaacctatg gtccc                                             25


<210>  16
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic - sox2-gRNA-#1-3F

<400>  16
caccggggca gccttgatgt cctaa                                             25


<210>  17
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic - sox2-gRNA-#1-3R

<400>  17
aaacttagga catcaaggct gcccc                                             25


<210>  18
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic - sox2-gRNA-#2-1F

<400>  18
caccgtcccc gtgcattgaa gaaag                                             25


<210>  19
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic - sox2-gRNA-#2-1R

<400>  19
aaacctttct tcaatgcacg gggac                                             25


<210>  20
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic - sox2-gRNA-#2-2F

<400>  20
caccgcaggt gtcttgcctg cccta                                             25


<210>  21
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic - sox2-gRNA-#2-2R

<400>  21
aaactagggc aggcaagaca cctgc                                             25


<210>  22
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic - sox2-gRNA-#2-3F

<400>  22
caccggcagc agaaggttct ttagc                                             25


<210>  23
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic - sox2-gRNA-#2-3R

<400>  23
aaacgctaaa gaaccttctg ctgcc                                             25


<210>  24
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic - sox2-gRNA-#3-1 F

<400>  24
caccgaaagc gagcgccctg attaa                                             25


<210>  25
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic - sox2-gRNA-#3-1 R

<400>  25
aaacttaatc agggcgctcg ctttc                                             25


<210>  26
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic - sox2-gRNA-#3-2 F

<400>  26
caccgtcccg ggagtaacga gcaag                                             25


<210>  27
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic - sox2-gRNA-#3-2 R

<400>  27
aaaccttgct cgttactccc gggac                                             25


<210>  28
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic - sox2-gRNA-#3-3 F

<400>  28
caccggttac tcccgggaga ggcgc                                             25


<210>  29
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic - sox2-gRNA-#3-3 R

<400>  29
aaacgcgcct ctcccgggag taacc                                             25


