                               SEQUENCE LISTING

<110> NUBIYOTA LLC
 
<120> BACTERIAL COMPOSITIONS AND METHODS OF USE THEREOF FOR TREATMENT 
      OF METABOLIC SYNDROME

<130> 159843-011501/PCT

<140> PCT/US2021/054144
<141> 2021-10-08

<150> 63/092,875
<151> 2020-10-16

<160> 27    

<170> PatentIn version 3.5

<210> 1
<211> 651
<212> DNA
<213> Faecalibacterium prausnitzii


<220>
<221> modified_base
<222> (29)..(29)
<223> a, c, t, g, unknown or other

<220>
<221> modified_base
<222> (32)..(32)
<223> a, c, t, g, unknown or other

<220>
<221> modified_base
<222> (646)..(646)
<223> a, c, t, g, unknown or other

<400> 1
tatttctacg ttcgtcaagg gatgtcaana antggtaagg ttcttcgcgt tgcgtcgaat       60

taaaccacat actccactgc ttgtgcgggc ccccgtcaat tcctttgagt ttcaaccttg      120

cggtcgtact ccccaggtgg attacttatt gtgttaactg cggcactgaa ggggtcaatc      180

ctccaacacc tagtaatcat cgtttacggt gtggactacc agggtatcta atcctgtttg      240

ctacccacac tttcgagcct cagcgtcagt tggtgcccag taggccgcct tcgccactgg      300

tgttcctccc gatatctacg cattccaccg ctacaccggg aattccgcct acctctgcac      360

tactcaagac atacagtttt gaaagcagtt catgggttga gcccatggat ttcacttcca      420

acttgtctgc ccgcctgcgc tccctttaca cccagtaatt ccggacaacg cttgtgacct      480

acgttttacc gcggctgctg gcacgtagtt agccgtcact tccttgttga gtaccgtcat      540

tatcttcctc aacaacagga gtttacaatc cgaagacctt cttcctccac gcggcgtcgc      600

tgcatcaggg tttcccccat tgtgcaatat tccccactgc tgcctnccgt a               651


<210> 2
<211> 700
<212> DNA
<213> Barnesiella intestinihominis


<220>
<221> modified_base
<222> (13)..(13)
<223> a, c, t, g, unknown or other

<220>
<221> modified_base
<222> (16)..(16)
<223> a, c, t, g, unknown or other

<220>
<221> modified_base
<222> (30)..(30)
<223> a, c, t, g, unknown or other

<220>
<221> modified_base
<222> (32)..(37)
<223> a, c, t, g, unknown or other

<400> 2
gcacctcgca ggngantatt actagctgcn gnnnnnnacc gacattcccc ctgcgtttga       60

gcccgggtaa ggttcctcgc gtatcatcga attaaaccac atgttcctcc gcttgtgcgg      120

gcccccgtca attcctttga gtttcaccgt tgccggcgta ctccccaggt ggaatactta      180

acgctttcgc tgtaccgctt acattgtatc gcaaacagtt agtattcatc gtttactgcg      240

tggactacca gggtatctaa tcctgttcga tacccacgct ttcgtgcctc agcgtctgtt      300

tcaccctagc aggctgcctt cgcaatcggg gttctgcgtg atatctatgc atttcaccgc      360

tacaccacgc attccgcctg cctcttgtgc actctagctc gccagtttca acggcacact      420

ccgggttgag cccggaaatt tcaccgctga cttggcgtgc cgcctacgca ccctttaaac      480

ccaataaatc cggataacgc tcgcatcctc cgtattaccg cggctgctgg cacggagtta      540

gccgatgctt tttcttcgga tacttgcaat acgctacacg tagcgtactt tactctccga      600

caaaagaggt ttacaacccg tagggccgtc ttccctcacg cgacttggct ggttcagtct      660

gccgaccatt gaccaatatt cctcactgct gcctcccgta                            700


<210> 3
<211> 620
<212> DNA
<213> Dorea formicigenerans


<220>
<221> modified_base
<222> (314)..(314)
<223> a, c, t, g, unknown or other

<220>
<221> modified_base
<222> (437)..(437)
<223> a, c, t, g, unknown or other

<220>
<221> modified_base
<222> (471)..(471)
<223> a, c, t, g, unknown or other

<220>
<221> modified_base
<222> (489)..(489)
<223> a, c, t, g, unknown or other

<220>
<221> modified_base
<222> (497)..(497)
<223> a, c, t, g, unknown or other

<220>
<221> modified_base
<222> (543)..(543)
<223> a, c, t, g, unknown or other

<220>
<221> modified_base
<222> (553)..(553)
<223> a, c, t, g, unknown or other

<220>
<221> modified_base
<222> (560)..(560)
<223> a, c, t, g, unknown or other

<220>
<221> modified_base
<222> (578)..(578)
<223> a, c, t, g, unknown or other

<220>
<221> modified_base
<222> (598)..(598)
<223> a, c, t, g, unknown or other

<400> 3
tcaggtaagg ttcttcgcgt tgcttcgaat taaaccacat gctccaccgc ttgtgcgggt       60

ccccgtcaat tcctttgagt ttcattcttg cgaacgtact ccccaggtgg actgcttatt      120

gcgttagctg cggcaccgaa tagctttgct acccgacacc tagcagtcat cgtttacggc      180

gtggactacc agggtatcta atcctgtttg ctccccacgc tttcgagcct caacgtcagt      240

catcgtccag taagccgcct tcgccactgg tgttcctcct aatatctacg catttcaccg      300

ctacactagg aatnccactt acctctccga cactctagct gcacagtttc caaagcagtc      360

cacaggttga gcccatgcct ttcacttcag acttgcacag ccgtctacgc tccctttaca      420

cccagtaaat ccggatnacg cttgccccct acgtattacc gcggctgctg ncacgtagtt      480

agccggggnc ttcttantca ggtaccgtca ttttcttccc tgctgataga agtttacata      540

ccnaaatact tcntccttcn cgcggcgtcg ctgcatcngg ctttcgccca ttgtgcanta      600

ttccccactg ctgcctcccg                                                  620


<210> 4
<211> 639
<212> DNA
<213> Coprococcus catus


<220>
<221> modified_base
<222> (7)..(9)
<223> a, c, t, g, unknown or other

<220>
<221> modified_base
<222> (158)..(158)
<223> a, c, t, g, unknown or other

<220>
<221> modified_base
<222> (634)..(634)
<223> a, c, t, g, unknown or other

<400> 4
tcaccgnnnt gtcaaggcct ggtaaggttc ttcgcgttgc ttcgaattaa accacatgct       60

ccaccgcttg tgcgggtccc cgtcaattcc tttgagtttc attcttgcga acgtactccc      120

caggtggaat acttattgcg tttgctgcgg caccgaancc cttatgggcc ccgacaccta      180

gtattcatcg tttacggcgt ggactaccag ggtatctaat cctgtttgct ccccacgctt      240

tcgagcctca gcgtcattgt cagtccagta agccgccttc gccactggtg ttcctcctaa      300

tatctacgca tttcaccgct acactaggaa ttccgcttac ctctcctgaa atcaagcagg      360

gcagtttcaa aagccgtccc ggggttgagc cccgggcttt cacttctgac ttgctccgcc      420

gcctacgctc cctttacacc cagtaaatcc ggataacgct tgccccctac gtattaccgc      480

ggctgctggc acgtagttag ccggggcttc ttagtcaggt accgtcatta tcttccctgc      540

tgatagaagt ttacataccg agatacttct tccttcacgc ggcgtcgctg catcagggtt      600

tcccccattg tgcaatattc cccactgctg cctnccgta                             639


<210> 5
<211> 652
<212> DNA
<213> Anaerostipes hadrus


<220>
<221> modified_base
<222> (20)..(21)
<223> a, c, t, g, unknown or other

<400> 5
aaggtccggt taaggaccgn ncagaaggat gtcaagacca ggtaaggttc ttcgcgttgc       60

ttcgaattaa accacatgct ccaccgcttg tgcgggtccc cgtcaattcc tttgagtttc      120

attcttgcga acgtactccc caggtggaat acttactgcg ttggctgcgg caccgaagcc      180

tctacggccc cgacacctag tattcatcgt ttacggcgtg gactaccagg gtatctaatc      240

ctgtttgctc cccacgcttt cgtgcctcag tgtcagtttc agtccagtaa gccgccttcg      300

ccactgatgt tcctcctaat atctacgcat ttcaccgcta cactaggaat tccgcttacc      360

tctcctgcac tccagtctga cagtttcaaa agcagtccca gagttaagcc ctgggttttc      420

acttctgact tgccatacca cctacgcacc ctttacaccc agtaattccg gataacgctt      480

gccccctacg tattaccgcg gctgctggca cgtagttagc cggggcttct tagtcaggta      540

ccgtcatttt cttccctgct gatagagctt tacataccga gatacttctt cactcacgcg      600

gcgtcgctgc atcagggttt cccccattgt gcaatattcc ccactgctgc ct              652


<210> 6
<211> 674
<212> DNA
<213> Bacteroides uniformis


<220>
<221> modified_base
<222> (3)..(3)
<223> a, c, t, g, unknown or other

<400> 6
ganatgtctc cacatcattc agttgcaatt caagcccggg taaggttcct cgcgtatcat       60

cgaattaaac cacatgttcc tccgcttgtg cgggcccccg tcaattcctt tgagtttcac      120

cgttgccggc gtactcccca ggtggaatac ttaacgcttt cgcttggccg cttactgtat      180

atcgcaaaca gcgagtattc atcgtttact gtgtggacta ccagggtatc taatcctgtt      240

tgatacccac actttcgagc atcagcgtca gttacagtcc agcaggctgc cttcgcaatc      300

ggagttcttc gtgatatcta agcatttcac cgctacacca cgaattccgc ctgcctctac      360

tgtactcaag acacccagta tcaactgcaa ttttacggtt gagccgcaaa ctttcacaac      420

tgacttaagc gtccgcctac gctcccttta aacccaataa atccggataa cgctcggatc      480

ctccgtatta ccgcggctgc tggcacggag ttagccgatc cttattcata cggtacatac      540

aaaaaggcac acgtgcctca ctttattccc gtataaaaga agtttacaac ccatagggca      600

gtcatccttc acgctacttg gctggttcag actctcgtcc attgaccaat attcctcact      660

gctgccttcc cgta                                                        674


<210> 7
<211> 645
<212> DNA
<213> Bifidobacterium adolescentis

<400> 7
tgtcgggaac atgtcaagcc caggtaaggt tcttcgcgtt gcatcgaatt aatccgcatg       60

ctccgccgct tgtgcgggcc cccgtcaatt tctttgagtt ttagccttgc ggccgtactc      120

cccaggcggg atgcttaacg cgttggctcc gacacggaga ccgtggaatg gtccccacat      180

ccagcatcca ccgtttacgg cgtggactac cagggtatct aatcctgttc gctccccacg      240

ctttcgctcc tcagcgtcag tgacggccca gagacctgcc ttcgccattg gtgttcttcc      300

cgatatctac acattccacc gttacaccgg gaattccagt ctcccctacc gcactcaagc      360

ccgcccgtac ccggcgcgga tccaccgtta agcgatggac tttcacaccg gacgcgacga      420

accgcctacg agccctttac gcccaataat tccggataac gcttgcaccc tacgtattac      480

cgcggctgct ggcacgtagt tagccggtgc ttattcgaaa ggtacactca ccccgaaggg      540

cttgctccca gtcaaaagcg gtttacaacc cgaaggccgt catcccgcac gcggcgtcgc      600

tgcatcaggc ttgcgcccat tgtgcaatat tccccactgc tgcct                      645


<210> 8
<211> 677
<212> DNA
<213> Akkermansia muciniphila

<400> 8
tgtgtacgcc tccgaagagt cgcatgcttt cacatgttgt tcattacatg tcaagcccag       60

gtaaggttct tcgcgttgca tcgaattaag ccacatactc caccgcttgt gcgggtcccc      120

gtcaatttct ttgagtttta atcttgcgac cgtactcccc aggcggcacg cttaacgcgt      180

tagctccggc acgcaggggg tcgattcccc gcacaccaag cgtgcaccgt ttactgccag      240

gactacaggg gtatctaatc cctttcgctc ccctggcctt cgtgcctcag cgtcagttaa      300

tgtccaggaa cccgccttcg ccacgagtgt tcctctcgat atctacgcat ttcactgcta      360

caccgagaat tccggttccc cctccattac tctagtctcg cagtatcatg tgccgtccgc      420

gggttgagcc cgcgcctttc acacacgact tacgaaacag cctacgcacg ctttacgccc      480

agtgattccg aacaacgctt gagacctctg tattaccgcg gctgctggca cagagttagc      540

cgtctcttcc tcttgtggta ctatcttttt aatttgctcc cacatgacag gggtttacaa      600

tccgaagacc ttcattcccc cacgcggcgt cgcaccatca gggtttcccc cattgtgaat      660

gattctcgac tgctgcc                                                     677


<210> 9
<211> 708
<212> DNA
<213> Phascolarctobacterium faecium


<220>
<221> modified_base
<222> (14)..(14)
<223> a, c, t, g, unknown or other

<220>
<221> modified_base
<222> (25)..(25)
<223> a, c, t, g, unknown or other

<220>
<221> modified_base
<222> (703)..(703)
<223> a, c, t, g, unknown or other

<400> 9
acctgttttc ttgnccccga agggnaatct ctatctctag agcgttcaat caatgtcaag       60

ccttggtaag gttcttcgcg ttgcgtcgaa ttaaaccaca tactccaccg cttgtgcggg      120

cccccgtcaa ttcctttgag tttcaacctt gcggccgtac tccccaggcg gggtacttat      180

tgcgttaact ccggcacaga aggggtcgat acctcctaca cctagtaccc atcgtttacg      240

gccaggacta ccggggtatc taatcccgtt cgctaccctg gctttcgcat ctcagcgtca      300

gacacagtcc agaaaggcgc cttcgccact ggtgttcctc ccaatatcta cgcatttcac      360

cgctacactg ggaattcccc tttcctctcc tgcactcaag cctaacagtt tccagcgcca      420

tacggggttg agccccgcat tttcacgctc gacttattaa gccgcctaca tgctctttac      480

gcccaataat tccggacaac gctcgccacc tacgtattac cgcggctgct ggcacgtagt      540

tagccgtggc ttcctcgttt actaccgtca ttgcaatgca ttgttcacac actgcacgtt      600

cgtcataaac aacagagctt tacagaccga aatccttcat cactcacgcg gcgttgctcc      660

gtcagacttt cgtccattgc ggaagattcc ccactgctgc ctnccgta                   708


<210> 10
<211> 682
<212> DNA
<213> Agathobaculum butyriciproducens


<220>
<221> modified_base
<222> (27)..(27)
<223> a, c, t, g, unknown or other

<400> 10
ccacctgtca ccgatgttcc gaagaanagc cttatctcta aggcggtcat cgggatgtca       60

agacctggta aggttcttcg cgttgcttcg aattaaacca catactccac tgcttgtgcg      120

ggcccccgtc aattcctttg agtttcaacc ttgcggccgt actccccagg tgggatactt      180

attgtgttaa ctgcggcacg gaaggggtca atacctccca cacctagtat ccatcgttta      240

cggcgtggac taccagggta tctaatcctg tttgctcccc acgctttcgc gcctcagcgt      300

cagttaatgt ccagcaggcc gccttcgcca ctggtgttcc tccgtatatc tacgcatttc      360

accgctacac acggaattcc gcctgcctct ccatcactca agaccagcag ttttgaaagc      420

agtttatggg ttaagcccat agatttcact tccaacttac cggcccgcct gcgcgccctt      480

tacacccagt aaatccggat aacgcttgct ccctacgtat taccgcggct gctggcacgt      540

agttagccgg agcttattct tcaggtaccg tcattttttt cgtccctgat taaagatctt      600

tacaacccga aggccttctt caatcacgcg gcgttgctgc gtcagggttt cccccattgc      660

gcaatattcc ccactgctgc ct                                               682


<210> 11
<211> 654
<212> DNA
<213> Bacteroides xylanisolvens


<220>
<221> modified_base
<222> (248)..(248)
<223> a, c, t, g, unknown or other

<220>
<221> modified_base
<222> (533)..(533)
<223> a, c, t, g, unknown or other

<400> 11
attattcaaa tgcaatttaa gcccgggtaa ggttcctcgc gtatcatcga attaaaccac       60

atgttcctcc gcttgtgcgg gcccccgtca attcctttga gtttcaccgt tgccggcgta      120

ctccccaggt ggaatactta atgctttcgc ttggccgctt actgtatatc gcaaacagcg      180

agtattcatc gtttactgtg tggactacca gggtatctaa tcctgtttga tacccacact      240

ttcgagcntc agtgtcagtt gcagtctagt gagctgcctt cgcaatcgga gttcttcgtg      300

atatctaagc atttcaccgc tacaccacga attccgccca cctctactgt actcaagact      360

gccagtttca actgcaattt tacggttgag ccgcaaactt tcacaactga cttaacaatc      420

cacctacgct ccctttaaac ccaataaatc cggataacgc tcggatcctc cgtattaccg      480

cggctgctgg cacggagtta gccgatcctt attcatatgg tacatacaaa atnccacacg      540

tggaatactt tattcccata taaaagaagt ttacaaccca tagggcagtc atccttcacg      600

ctacttggct ggttcagact ctcgtccatt gaccaatatt cctcactgct gcct            654


<210> 12
<211> 631
<212> DNA
<213> Collinsella aerofaciens


<220>
<221> modified_base
<222> (4)..(4)
<223> a, c, t, g, unknown or other

<400> 12
tcanccatat gtcaagccct ggtaaggttc ttcgcgttgc ttcgaattaa gccacatgct       60

ccgctgcttg tgcgggcccc cgtcaattcc tttgagtttt agccttgcgg ccgtactccc      120

caggcgggac gcttaatgcg ttggctgcgg cacgggggga tcgtcccccc acacctagcg      180

tccatcgttt acggctggga ctaccagggt atctaatcct gttcgctccc ccagctttcg      240

cgcctcagcg tcggtctcgg cccagagggc cgccttcgcc accggtgttc cacccgatat      300

ctgcgcattc caccgctaca ccgggtgttc caccctcccc taccggaccc aagccgcgga      360

ggttccgggg gcttcggggg gttgagcccc ccgcttcgac ccccggcctg ccgggccgcc      420

tacgcgcgct ttacgcccaa tgaatccgga taacgctcgc cccctacgta ttaccgcggc      480

tgctggcacg tagttagccg gggcttcttc tgcaggtaca gtcttgactc ttccctgctg      540

aaagcggttt acgacccgaa ggcctccgtc ccgcacgcgg cgtcgctgcg tcagggttcc      600

ccccattgcg caagattccc cactgctgcc t                                     631


<210> 13
<211> 677
<212> DNA
<213> Roseburia faecis


<220>
<221> modified_base
<222> (9)..(10)
<223> a, c, t, g, unknown or other

<220>
<221> modified_base
<222> (40)..(40)
<223> a, c, t, g, unknown or other

<400> 13
cctgtcacnn atgctccgaa gagaaagtac attacataan tctgtcatcg ggatgtcaag       60

acttggtaag gttcttcgcg ttgcttcgaa ttaaaccaca tgctccaccg cttgtgcggg      120

tccccgtcaa ttcctttgag tttcattctt gcgaacgtac tccccaggtg gaatacttat      180

tgcgtttgct gcggcaccga agagcaatgc tccccgacac ctagtattca tcgtttacgg      240

cgtggactac cagggtatct aatcctgttt gctccccacg ctttcgagcc tcagcgtcag      300

ttatcgtcca gtaagccgcc ttcgccactg gtgttcctcc taatatctac gcatttcacc      360

gctacactag gaattccact tacccctccg acactctagt acgacagttt ccaatgcagt      420

accggggttg agccccgggc tttcacatca gacttgccgc accgcctgcg ctccctttac      480

acccagtaaa tccggataac gcttgcacca tacgtattac cgcggctgct ggcacgtatt      540

tagccggtgc ttcttagtca ggtaccgtca ttcttcttcc ctgctgatag agctttacat      600

accgaaatac ttcttcgctc acgcggcgtc gctgcatcag ggtttccccc attgtgcaat      660

attccccact gctgcct                                                     677


<210> 14
<211> 620
<212> DNA
<213> Blautia luti

<400> 14
caagacttgg taaggttctt cgcgttgctt cgaattaaac cacatgctcc accgcttgtg       60

cgggtccccg tcaattcctt tgagtttcat tcttgcgaac gtactcccca ggtggaatac      120

ttactgcgtt tgcgacggca ccgaagagct ttgctccccg acacctagta ttcatcgttt      180

acggcgtgga ctaccagggt atctaatcct gtttgctccc cacgctttcg agcctcaacg      240

tcagttaccg tccagtaagc cgccttcgcc actggtgttc ctcctaatat ctacgcattt      300

caccgctaca ctaggaattc cgcttacccc tccggcactc aagtatgaca gtttccaatg      360

cagtccacag gttgagccca tgcctttcac atcagacttg ccacaccgtc tacgctccct      420

ttacacccag taaatccgga taacgcttgc cccctacgta ttaccgcggc tgctggcacg      480

tagttagccg gggcttctta gtcaggtacc gtcactatct tccctgctga tagaagttta      540

cataccgaga tacttcttcc ttcacgcggc gtcgctgcat cagggtttcc cccattgtgc      600

aatattcccc actgctgcct                                                  620


<210> 15
<211> 678
<212> DNA
<213> Lactobacillus mucosae

<400> 15
aacgccctat ctctagggtt ggcgcaagat gtcaagacct ggtaaggttc ttcgcgtagc       60

ttcgaattaa accacatgct ccaccgcttg tgcgggcccc cgtcaattcc tttgagtttc      120

aaccttgcgg tcgtactccc caggcggagt gcttaatgcg ttagctgcgg cactgaaggg      180

cggaaaccct ccaacaccta gcactcatcg tttacggcat ggactaccag ggtatctaat      240

cctgttcgct acccatgctt tcgagcctca gcgtcagttg cagaccagac agccgccttc      300

gccactggtg ttcttccata tatctacgca ttccaccgct acacatggag ttccactgtc      360

ctcttctgca ctcaagtctg acagtttccg atgcacttct ttggttaagc caaaggcttt      420

cacatcagac ttatcaaacc gcctgcgctc gctttacgcc caataaatcc ggataacgct      480

tgccacctac gtattaccgc ggctgctggc acgtagttag ccgtgacttt ctggttagat      540

accgtcactg cgtgaacagt tgctctcacg cacgttcttc tctaacaaca gagctttacg      600

agccgaaacc cttcttcact cacgcggtgt tgctccatca ggcttgcgcc cattgtggaa      660

gattccctac tgctgcct                                                    678


<210> 16
<211> 637
<212> DNA
<213> Ruminococcus albus


<220>
<221> modified_base
<222> (7)..(8)
<223> a, c, t, g, unknown or other

<220>
<221> modified_base
<222> (10)..(10)
<223> a, c, t, g, unknown or other

<220>
<221> modified_base
<222> (12)..(12)
<223> a, c, t, g, unknown or other

<220>
<221> modified_base
<222> (18)..(18)
<223> a, c, t, g, unknown or other

<400> 16
gctatgnntn cnatgtcnag acctggtaag gttcttcgcg ttgcttcgaa ttaatccaca       60

tactccactg cttgtgcggg cccccgtcaa ttcctttgag tttcaacctt gcggtcgtac      120

tccccaggtg gattacttat tgcgtttgct gcggcacgga aggggtcagt ccccccacac      180

ctagtaatca tcgtttacgg cgtggactac cagggtatct aatcctgttt gctccccacg      240

ctttcgagcc tcagcgtcag ttaaagccca gtaagccgcc ttcgccactg atgttcctcc      300

taatatctac gcatttcacc gctacactag gaattccgct tacctctact tcactcaaga      360

accacagttt caaatgcagt ttatgggtta agcccatagt tttcacatct gacttgcgat      420

cccgcctacg ctccctttac acccagtaat tccggacaac gctcgctccc tacgtattac      480

cgcggctgct ggcacgtagt tagccggagc ttcctcctca ggtaccgtct tttttcgtcc      540

ctgaagacag aggtttacaa tcctaaaacc ttcttccctc acgcggcatc gctgcatcag      600

agtttcctcc attgtgcaat attccccact gctgcct                               637


<210> 17
<211> 697
<212> DNA
<213> Bifidobacterium longum


<220>
<221> modified_base
<222> (30)..(32)
<223> a, c, t, g, unknown or other

<400> 17
catgcaccac ctgtgaaccc gccccgaagn nnaagccgta tctctacgac cgtcgggaac       60

atgtcaagcc caggtaaggt tcttcgcgtt gcatcgaatt aatccgcatg ctccgccgct      120

tgtgcgggcc cccgtcaatt tctttgagtt ttagccttgc ggccgtactc cccaggcggg      180

atgcttaacg cgttagctcc gacacggaac ccgtggaacg ggccccacat ccagcatcca      240

ccgtttacgg cgtggactac cagggtatct aatcctgttc gctccccacg ctttcgctcc      300

tcagcgtcag taacggccca gagacctgcc ttcgccattg gtgttcttcc cgatatctac      360

acattccacc gttacaccgg gaattccagt ctcccctacc gcactcaagc ccgcccgtac      420

ccggcgcgga tccaccgtta agcgatggac tttcacaccg gacgcgacga accgcctacg      480

agccctttac gcccaataat tccggataac gcttgcaccc tacgtattac cgcggctgct      540

ggcacgtagt tagccggtgc ttattcaacg ggtaaactca ctctcgcttg ctccccgata      600

aaagaggttt acaacccgaa ggcctccatc cctcacgcgg cgtcgctgca tcaggcttgc      660

gcccattgtg caatattccc cactgctgcc tcccgta                               697


<210> 18
<211> 675
<212> DNA
<213> Christensenella minuta


<220>
<221> modified_base
<222> (14)..(14)
<223> a, c, t, g, unknown or other

<220>
<221> modified_base
<222> (20)..(24)
<223> a, c, t, g, unknown or other

<220>
<221> modified_base
<222> (26)..(26)
<223> a, c, t, g, unknown or other

<220>
<221> modified_base
<222> (46)..(46)
<223> a, c, t, g, unknown or other

<400> 18
cctgtctctc tgcnccgaan nnnnantgta tctctacagt cgtcanagga tgtcaagcct       60

tggtaaggtt cttcgcgttg cttcgaatta aaccacatgc tccgctgctt gtgcgggccc      120

ccgtcaattc ctttgagttt caaccttgcg atcgtactcc ccaggcggga tacttaatgc      180

gtttgcttcg gcacggaacc ctatcgggcc ccacacctag tatccatcgt ttacggcgtg      240

gactaccagg gtatctaatc ctgtttgctc cccacgcttt cgtgcctcag tgtcagttac      300

agtccagaaa gtcgccttcg ccactggtgt tcctcctaat atctacgcat ttcaccgcta      360

cactaggaat tccacttccc tctcctgtac tcaagtcaca cagtttcaaa tgcaaccccg      420

gggttaagcc ccggtctttc acatctgact tacatgacca cctacgcacc ctttacgccc      480

agtaattccg gacaacgctt gctccctacg tattaccgcg gctgctggca cgtagttagc      540

cggagcttcc tcctatggta ccgtcatttc tttcgtccca taggacaaag gtttacaatc      600

cgaagacctt cttccctcac gcggcgttgc tgggtcaggg tttcccccat tgcccaatat      660

tccccactgc tgcct                                                       675


<210> 19
<211> 681
<212> DNA
<213> Oscillibacter valericigenes


<220>
<221> modified_base
<222> (29)..(29)
<223> a, c, t, g, unknown or other

<400> 19
cctgtctctg ctttccccga agggcaccnt aatgtatctc tacttcgtta gcaggatgtc       60

aagacctggt aaggttcttc gcgttgcttc gaattaaacc acataatcca ccgcttgtgc      120

gggcccccgt caattccttt gagtttcaac cttgcgatcg tactccccag gtgggatact      180

tattgtgtta actgcggcac gcagggggtc agtccccgca cacctagtat ccatcgttta      240

cagcgtggac taccagggta tctaatcctg ttcgctcccc acgctttcgc gcctcaccgt      300

cagttaccgt ccagtaatcc gccttcgcca ctggtgttct tccttatatc tacgcatttc      360

accgctacac aaggaattcc gattacctct ccggcactca agacatacag tttcaaatgc      420

agtttcaggg ttaagccctg agatttcaca tctgacttgc atgcccggct gcacgccctt      480

tacacccagt aaatccggac aacgcttgcc acctacgtat taccgcggct gctggcacgt      540

agttagccgt ggcttattca agtggtaccg tcttctgctc ttcccactta aaagaagttt      600

acaacccgaa agccttcttc cttcacgcgg cgttgctggg tcaggcttgc gcccattgcc      660

caatattccc cactgctgcc t                                                681


<210> 20
<211> 696
<212> DNA
<213> Faecalicoccus acidiformans


<220>
<221> modified_base
<222> (21)..(22)
<223> a, c, t, g, unknown or other

<220>
<221> modified_base
<222> (28)..(28)
<223> a, c, t, g, unknown or other

<220>
<221> modified_base
<222> (691)..(691)
<223> a, c, t, g, unknown or other

<400> 20
cctgtctcct tggtatcctc nntctatngt ctccatagac tcgcaaggga tgtcaagacc       60

tggtaaggtt cttcgcgttg cttcgaatta aaccacatac tccaccgctt gtgcgggccc      120

ccgtcaattc ctttgagttt cacacttgcg tgcatactcc ccaggcggag gacttattgc      180

gttaactgca gcactgagtt cccccaacac ttagtcctca tcgtttacgg cgtggactac      240

tagggtatct aatcctattt gctccccacg ctttcgtgct tcagtgtcag ttgcaggcca      300

ggcgaccgcc ttcgccaccg gtgttcctcc atatatctac gcattttacc gctacacatg      360

gaattccgtc gccctctcct gctctctagc tcgacagttt ccagagccaa cagcggttga      420

gccgctccct tttactccag acttatcgtg ccacctacgc accctttacg cccaatcatt      480

ccggataacg ctcgccacct acgtattacc gcggctgctg gcacgtagtt agccgtggct      540

ttctggtaag ataccatcac tccttcatca tttcctatga aggtcgtttt tctcttacaa      600

cagagcttta cgatccgaag accttcttca ctcacgcggc attgctcgtt cagggtttcc      660

cccattgacg aaaattccct actgctgcct nccgta                                696


<210> 21
<211> 639
<212> DNA
<213> Anaerofustis stercorihominis

<400> 21
taatctctta ggcggtcaag ggatgtcaag acctggtaag gttcttcgcg ttgcttcgaa       60

ttaaaccaca tgctccgctg cttgtgcggg cccccgtcaa ttcctttgag tttcactctt      120

gcgagcgtac tccccaggcg gaatacttaa tgtgttaact gcggcactga gttaccccaa      180

cacctagtat tcatcgttta cggcgtggac taccagggta tctaatcctg ttcgctcccc      240

acgctttcgc acctcagcgt cagttatcgt ccagtaagcc gccttcgcca ccggtgttct      300

tcctaatctc tacgcatttc accgctacac taggaattcc gcttacctct ccgatactca      360

agttatccag tttcaagtgc acttttccgg ttgagccgaa aactttcaca cctgacttaa      420

ttaaccgcct acgtgctctt tacgcccagt gaatccggac aacgcttgct ccctacgtat      480

taccgcggct gctggcacgt agttagccgg agcttcctcc ttgggtaccg tcattatctt      540

ccccaaagac agagctttac gatccgaaaa ccttcatcgc tcacgcggcg ttgctgcgtc      600

agggtttccc ccattgcgca atattcccca ctgctgcct                             639


<210> 22
<211> 698
<212> DNA
<213> Parabacteroides distasonis


<220>
<221> modified_base
<222> (28)..(29)
<223> a, c, t, g, unknown or other

<220>
<221> modified_base
<222> (37)..(37)
<223> a, c, t, g, unknown or other

<220>
<221> modified_base
<222> (665)..(665)
<223> a, c, t, g, unknown or other

<400> 22
tgcagcacct cgcaacggct attgctanna aaggtgnttc cacctcggtc cgaatgcgtt       60

caaacccggg taaggttcct cgcgtatcat cgaattaaac cacatgttcc tccgcttgtg      120

cgggcccccg tcaattcctt tgagtttcac cgttgccggc gtactcccca ggtggatcac      180

ttaacgcttt cgctgtgccg cttactgtgt atcgcaaaca gctagtgatc atcgtttact      240

gcgtggacta ccagggtatc taatcctgtt tgatccccac gctttcgtgc atcagcgtca      300

gtcatggctt ggcaggctgc cttcgcaatc ggggttctgc gtgatatcta agcatttcac      360

cgctacacca cgcattccgc ctgcctcaaa catactcaag ccccccagtt tcaacggcaa      420

ttctatggtt gagccacaga ctttcaccgc tgacttaaaa ggccgcctac gcacccttta      480

aacccaataa atccggataa cgctcggatc ctccgtatta ccgcggctgc tggcacggag      540

ttagccgatc cttattcata aggtacatac aaaacgggac acgtcccgca ctttattccc      600

ttataaaaga ggtttacgat ccatagaacc ttcatccctc acgcgacttg gctggttcag      660

gcttnacgcc cattgaccaa tattcctcac tgctgcct                              698


<210> 23
<211> 705
<212> DNA
<213> Parasutterella excrementihominis


<220>
<221> modified_base
<222> (35)..(36)
<223> a, c, t, g, unknown or other

<400> 23
tgcagcacct gtgttcaggc tcccttgcgg gcacnnctct cattacaaga gcttcctgac       60

atgtcaaggg taggtaaggt ttttcgcgtt gcatcgaatt aatccacatc atccaccgct      120

tgtgcgggtc cccgtcaatt cctttgagtt ttagtcttgc gaccgtactt cccaggcggt      180

taacttctcg cgttggctgc gttactgaga atattacttc ccaacaacta gttaacatcg      240

tttagggcgt ggactaccag ggtatctaat cctgtttgct ccccacgctt tcgtgcctga      300

gcgtcagtta tgtcccagga ggctgccttc gccatcggtg ttcttccaca tatctacgca      360

tttcactgct acacgtggaa ttccacctcc ctctgacaca ctctagtcga gcagtcacat      420

atgccattcc cgagttaagc tcggggattt cacatctgtc ttactcaacc gcctgcgcac      480

cctttacgcc cagtaattcc gattaacgct cgcaccctac gtattaccgc ggctgctggc      540

acgtagttag ccggtgctta ttcttagagt accgtcagca acaccctttt ttaaaaggtg      600

tcttttcgtt ctctacaaaa gtggtttaca acccgagggc cttcatccca cacgcggaat      660

agctggatca ggcttgcgcc cattgtccaa aattccccac tgctg                      705


<210> 24
<211> 651
<212> DNA
<213> Clostridium scindens


<220>
<221> modified_base
<222> (20)..(20)
<223> a, c, t, g, unknown or other

<220>
<221> modified_base
<222> (28)..(28)
<223> a, c, t, g, unknown or other

<400> 24
gagcgcgtta cgcgctttgn catcgggntg tcaagatcag gtaaggttct tcgcgttgct       60

tcgaattaaa ccacatgctc caccgcttgt gcgggtcccc gtcaattcct ttgagtttca      120

ttcttgcgaa cgtactcccc aggtggacta cttattgcgt ttgctgcggc accgaatggc      180

cttgccaccc gacacctagt agtcatcgtt tacggcgtgg actaccaggg tatctaatcc      240

tgtttgctcc ccacgctttc gagcctcaac gtcagtcatc gtccagcagg ccgccttcgc      300

cactggtgtt cctcctaata tctacgcatt tcaccgctac actaggaatt ccgcctgcct      360

ctccgacact ccagccacgc agttccaaat gcagtcccgg ggttgagccc cgggctttca      420

catctggctt gcatcgccgt ctacgctccc tttacaccca gtaaatccgg ataacgcttg      480

ccccctacgt attaccgcgg ctgctggcac gtagttagcc ggggcttctt agtcaggtac      540

cgtcatcttc ttccctgctg atagaagttt acataccgaa atacttcatc cttcacgcgg      600

cgtcgctgca tcagggtttc ccccattgtg caatattccc cactgctgcc t               651


<210> 25
<211> 1490
<212> DNA
<213> Acidaminococcus intestini


<220>
<221> modified_base
<222> (18)..(18)
<223> a, c, t, g, unknown or other

<220>
<221> modified_base
<222> (26)..(26)
<223> a, c, t, g, unknown or other

<400> 25
gacttcaccc caatcatngg ccccanttag acagctgact cctaaaaggt tatctcaccg       60

gcttcgggtg ttaccaactt tcgtggtgtg acgggcggtg tgtacaaggc ccgggaacgt      120

attcaccgca gtatgctgac ctgcgattac tagcgattcc aacttcacgt aggcgggttg      180

cagcctacga tccgaactgg ggtcgggttt ctgggatttg ctccacctcg cggtttcgct      240

gccctttgtt gccgaccatt gtagtacgtg tgtagcccaa gacataaggg gcatgatgac      300

ttgacgtcat ccccgccttc ctccaagtta tccctggcag tctcctatga gtccccgcct      360

ttacgcgctg gtaacatagg ataggggttg cgctcgttgc gggacttaac ccaacatctc      420

acgacacgag ctgacgacag ccatgcacca cctgttttcg tgtccccgaa gggagggacc      480

tatctctagg tctttcactc aatgtcaagc cttggtaagg ttcttcgcgt tgcgtcgaat      540

taaaccacat actccaccgc ttgtgcgggc ccccgtcaat tcctttgagt ttcaatcttg      600

cgatcgtagt ccccaggcgg gatacttatt gcgttaactc cggcacagaa ggggtcgata      660

cctcctacac ctagtatcca tcgtttacgg ccaggactac cggggtatct aatcccgttt      720

gctaccctgg ctttcgcatc tcagcgtcag acacagtcca gaaaggcgcc ttcgccactg      780

gtgttcctcc caatatctac gcatttcacc gctacactgg gaattcccct ttcctctcct      840

gcactcaaga cttccagtat ccaacgccat acggggttaa gccccgcatt ttcacgtcag      900

acttaaaagc ccgcctacat gctctttacg cccaataatt ccggacaacg cttgccacct      960

acgtattacc gcggctgctg gcacgtagtt agccgtggct tcctcgttag gtaccgtcaa     1020

caccatgacc tgttcgaaca cggtgctttc gtccctaaca acagagtttt acaatccgaa     1080

gaccttcatc actcacgcgg cgttgctccg tcagactttc gtccattgcg gaagattccc     1140

cactgctgcc tcccgtagga gtttgggccg tgtctcagtc ccaatgtggc cgttcatcct     1200

ctcagaccgg ctactgatca tcgccttggt gagccgttac cccaccaact agctaatcag     1260

acgcgggccc atcttccagc gatagcttgc aagcagaggc catctttcct ccctcctcca     1320

tgcggaggag ggagcacatt cggtattagc atccctttcg gaatgttgtc cccaactgga     1380

gggcaggttg cccacgcgtt actcacccgt tcgccactaa gaacttaccg aaataagttc     1440

tccgttcgac ttgcatgtgt taagcacgcc gccagcgttc gtcctgagcc                1490


<210> 26
<211> 32
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      primer

<400> 26
attaaccctc actaaagtac ggraggcagc ag                                     32


<210> 27
<211> 37
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      primer

<400> 27
aatacgactc actataggga cracacgagc tgacgac                                37


