                         SEQUENCE LISTING

<110>  University of Washington
 
<120>  KITS, METHODS, POLYPEPTIDES, SYSTEMS AND NON-TRANSITORY, 
       MACHINE-READABLE STORAGE MEDIA FOR DETECTING A NUCLEIC ACID

<130>  3915-P1128WO.UW

<150>  US 63/049,758
<151>  2020-07-09

<150>  US 63/049,941
<151>  2020-07-09

<150>  US 63/050,022
<151>  2020-07-09

<150>  US 63/050,031
<151>  2020-07-09

<160>  29    

<170>  PatentIn version 3.5

<210>  1
<211>  40
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  1
ccactgcgtt ctccattctt ttccccgcat tacgtttggt                             40


<210>  2
<211>  43
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  2
gcgatcaaaa caacgtcggt tattgccatg ttgagtgaga gcg                         43


<210>  3
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  3
tggttactgc cagttgaatc t                                                 21


<210>  4
<211>  52
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  4
accaacacct cacatcacac ataataggtt tacccaataa tactgcgtct tg               52


<210>  5
<211>  18
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  5
tggaccccaa aatcagcg                                                     18


<210>  6
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  6
atctggactg ctattggtgt ta                                                22


<210>  7
<211>  40
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  7
cagcttctgg cccagttcct gtggtggtga cggtaaaatg                             40


<210>  8
<211>  48
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  8
cttccctatg gtgctaacaa agtccaatgt gatcttttgg tgtattca                    48


<210>  9
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  9
gtagtagaaa taccatcttg gact                                              24


<210>  10
<211>  48
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  10
accaacacct cacatcacac ataataatat gggttgcaac tgagggag                    48


<210>  11
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  11
ctactaccga agagctacca g                                                 21


<210>  12
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  12
gcagcattgt tagcaggatt g                                                 21


<210>  13
<211>  39
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  13
tgtgtaggtc aaccacgttc tgcttcagcg ttcttcgga                              39


<210>  14
<211>  53
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  14
gtgccatcaa attggatgac aaaggttttg tatgcgtcaa tatgcttatt cag              53


<210>  15
<211>  45
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  15
accaacacct cacatcacac ataatatcca tgccaatgcg cgaca                       45


<210>  16
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  16
ccaaatttca aagatcaagt cat                                               23


<210>  17
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  17
gaccaggaac taatcagaca ag                                                22


<210>  18
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  18
gcttgagttt catcagcctt c                                                 21


<210>  19
<211>  47
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  19
accacaccta ccaccactaa taactaactc cagccatcct caccatc                     47


<210>  20
<211>  60
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  20
ccatcagcac caagactacc cacctcgcca ccaaaccaac acctcacatc acacataata       60


<210>  21
<211>  34
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  21
ttggtggcga ggtgggtagt cttggtgctg atgg                                   34


<210>  22
<211>  61
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  22
cctgaccact tccgaaccca accacctacg acagaccaca cctaccacca ctaataacta       60

a                                                                       61


<210>  23
<211>  34
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  23
ctgtcgtagg tggttgggtt cggaagtggt cagg                                   34


<210>  24
<211>  200
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  24
aatggacccc aaaatcagcg aaatgcaccc cgcattacgt ttggtggacc ctctggagtc       60

aatgggtggt gccagaatgg agaacgcagt ggggcgcgat caaaacaacg tcggccccaa      120

gttgatctcc agccatcctc accatcgttc accgctctca ctcaacatgg caagaattaa      180

caccaatagc agtccagatg                                                  200


<210>  25
<211>  540
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  25

Pro Leu Glu Glu Ala Pro Trp Pro Pro Pro Glu Gly Ala Phe Val Gly 
1               5                   10                  15      


Phe Val Leu Ser Arg Pro Glu Pro Met Trp Ala Glu Leu Lys Ala Leu 
            20                  25                  30          


Ala Ala Cys Arg Asp Gly Arg Val His Arg Ala Glu Asp Pro Leu Ala 
        35                  40                  45              


Gly Leu Gly Asp Leu Glu Glu Val Arg Gly Leu Leu Ala Lys Asp Leu 
    50                  55                  60                  


Ala Val Leu Ala Leu Arg Glu Gly Leu Asp Leu Ala Pro Gly Asp Asp 
65                  70                  75                  80  


Pro Met Leu Leu Ala Tyr Leu Leu Asp Pro Ser Asn Thr Thr Pro Glu 
                85                  90                  95      


Gly Val Ala Arg Arg Tyr Gly Gly Glu Trp Thr Glu Asp Ala Ala His 
            100                 105                 110         


Arg Ala Leu Leu Ser Glu Arg Leu His Arg Asn Leu Leu Lys Arg Leu 
        115                 120                 125             


Glu Gly Glu Glu Lys Leu Leu Trp Leu Tyr His Glu Val Glu Lys Pro 
    130                 135                 140                 


Leu Ser Arg Val Leu Ala His Met Glu Ala Thr Gly Val Arg Leu Asp 
145                 150                 155                 160 


Val Ala Tyr Leu Gln Ala Leu Ser Leu Glu Leu Ala Glu Glu Ile Arg 
                165                 170                 175     


Arg Leu Glu Glu Glu Val Phe Arg Leu Ala Gly His Pro Phe Asn Leu 
            180                 185                 190         


Asn Ser Arg Asp Gln Leu Glu Arg Val Leu Phe Asp Glu Leu Arg Leu 
        195                 200                 205             


Pro Ala Leu Gly Lys Thr Gln Lys Thr Gly Lys Arg Ser Thr Ser Ala 
    210                 215                 220                 


Ala Val Leu Glu Ala Leu Arg Glu Ala His Pro Ile Val Glu Lys Ile 
225                 230                 235                 240 


Leu Gln His Arg Glu Leu Thr Lys Leu Lys Asn Thr Tyr Val Asp Pro 
                245                 250                 255     


Leu Pro Ser Leu Val His Pro Arg Thr Gly Arg Leu His Thr Arg Phe 
            260                 265                 270         


Asn Gln Thr Ala Thr Ala Thr Gly Arg Leu Ser Ser Ser Asp Pro Asn 
        275                 280                 285             


Leu Gln Asn Ile Pro Val Arg Thr Pro Leu Gly Gln Arg Ile Arg Arg 
    290                 295                 300                 


Ala Phe Val Ala Glu Ala Gly Trp Ala Leu Val Ala Leu Asp Tyr Ser 
305                 310                 315                 320 


Gln Ile Glu Leu Arg Val Leu Ala His Leu Ser Gly Asp Glu Asn Leu 
                325                 330                 335     


Ile Arg Val Phe Gln Glu Gly Lys Asp Ile His Thr Gln Thr Ala Ser 
            340                 345                 350         


Trp Met Phe Gly Val Pro Pro Glu Ala Val Asp Pro Leu Met Arg Arg 
        355                 360                 365             


Ala Ala Lys Thr Ile Asn Phe Gly Ile Val Tyr Gly Met Ser Pro Tyr 
    370                 375                 380                 


Gly Leu Ala Lys Glu Leu Lys Ile Gly Arg Arg Glu Ala Lys Ala Phe 
385                 390                 395                 400 


Ile Glu Arg Tyr Phe Glu Arg Tyr Pro Gly Val Lys Arg Tyr Met Glu 
                405                 410                 415     


Gln Ile Val Ala Glu Ala Arg Glu Lys Gly Tyr Val Glu Thr Leu Phe 
            420                 425                 430         


Gly Arg Arg Arg Tyr Val Pro Asp Leu Asn Ala Arg Val Lys Ser Val 
        435                 440                 445             


Arg Glu Ala Ala Glu Arg Met Ala Phe Asn Met Pro Val Gln Gly Thr 
    450                 455                 460                 


Ala Ala Asp Leu Met Lys Leu Ala Met Val Lys Leu Phe Pro Arg Leu 
465                 470                 475                 480 


Arg Glu Met Gly Ala Arg Met Leu Leu Gln Val His Asp Glu Leu Leu 
                485                 490                 495     


Leu Glu Ala Pro Gln Ala Arg Ala Glu Glu Val Ala Ala Leu Ala Lys 
            500                 505                 510         


Glu Ala Met Glu Lys Ala Tyr Pro Leu Ala Val Pro Leu Glu Val Glu 
        515                 520                 525             


Val Gly Ile Gly Glu Asp Trp Leu Ser Ala Lys Gly 
    530                 535                 540 


<210>  26
<211>  559
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  26

Met Lys Ser Ser His His His His His His Glu Asn Leu Tyr Phe Gln 
1               5                   10                  15      


Ser Asn Ala Pro Leu Glu Glu Ala Pro Trp Pro Pro Pro Glu Gly Ala 
            20                  25                  30          


Phe Val Gly Phe Val Leu Ser Arg Pro Glu Pro Met Trp Ala Glu Leu 
        35                  40                  45              


Lys Ala Leu Ala Ala Cys Arg Asp Gly Arg Val His Arg Ala Glu Asp 
    50                  55                  60                  


Pro Leu Ala Gly Leu Gly Asp Leu Glu Glu Val Arg Gly Leu Leu Ala 
65                  70                  75                  80  


Lys Asp Leu Ala Val Leu Ala Leu Arg Glu Gly Leu Asp Leu Ala Pro 
                85                  90                  95      


Gly Asp Asp Pro Met Leu Leu Ala Tyr Leu Leu Asp Pro Ser Asn Thr 
            100                 105                 110         


Thr Pro Glu Gly Val Ala Arg Arg Tyr Gly Gly Glu Trp Thr Glu Asp 
        115                 120                 125             


Ala Ala His Arg Ala Leu Leu Ser Glu Arg Leu His Arg Asn Leu Leu 
    130                 135                 140                 


Lys Arg Leu Glu Gly Glu Glu Lys Leu Leu Trp Leu Tyr His Glu Val 
145                 150                 155                 160 


Glu Lys Pro Leu Ser Arg Val Leu Ala His Met Glu Ala Thr Gly Val 
                165                 170                 175     


Arg Leu Asp Val Ala Tyr Leu Gln Ala Leu Ser Leu Glu Leu Ala Glu 
            180                 185                 190         


Glu Ile Arg Arg Leu Glu Glu Glu Val Phe Arg Leu Ala Gly His Pro 
        195                 200                 205             


Phe Asn Leu Asn Ser Arg Asp Gln Leu Glu Arg Val Leu Phe Asp Glu 
    210                 215                 220                 


Leu Arg Leu Pro Ala Leu Gly Lys Thr Gln Lys Thr Gly Lys Arg Ser 
225                 230                 235                 240 


Thr Ser Ala Ala Val Leu Glu Ala Leu Arg Glu Ala His Pro Ile Val 
                245                 250                 255     


Glu Lys Ile Leu Gln His Arg Glu Leu Thr Lys Leu Lys Asn Thr Tyr 
            260                 265                 270         


Val Asp Pro Leu Pro Ser Leu Val His Pro Arg Thr Gly Arg Leu His 
        275                 280                 285             


Thr Arg Phe Asn Gln Thr Ala Thr Ala Thr Gly Arg Leu Ser Ser Ser 
    290                 295                 300                 


Asp Pro Asn Leu Gln Asn Ile Pro Val Arg Thr Pro Leu Gly Gln Arg 
305                 310                 315                 320 


Ile Arg Arg Ala Phe Val Ala Glu Ala Gly Trp Ala Leu Val Ala Leu 
                325                 330                 335     


Asp Tyr Ser Gln Ile Glu Leu Arg Val Leu Ala His Leu Ser Gly Asp 
            340                 345                 350         


Glu Asn Leu Ile Arg Val Phe Gln Glu Gly Lys Asp Ile His Thr Gln 
        355                 360                 365             


Thr Ala Ser Trp Met Phe Gly Val Pro Pro Glu Ala Val Asp Pro Leu 
    370                 375                 380                 


Met Arg Arg Ala Ala Lys Thr Ile Asn Phe Gly Ile Val Tyr Gly Met 
385                 390                 395                 400 


Ser Pro Tyr Gly Leu Ala Lys Glu Leu Lys Ile Gly Arg Arg Glu Ala 
                405                 410                 415     


Lys Ala Phe Ile Glu Arg Tyr Phe Glu Arg Tyr Pro Gly Val Lys Arg 
            420                 425                 430         


Tyr Met Glu Gln Ile Val Ala Glu Ala Arg Glu Lys Gly Tyr Val Glu 
        435                 440                 445             


Thr Leu Phe Gly Arg Arg Arg Tyr Val Pro Asp Leu Asn Ala Arg Val 
    450                 455                 460                 


Lys Ser Val Arg Glu Ala Ala Glu Arg Met Ala Phe Asn Met Pro Val 
465                 470                 475                 480 


Gln Gly Thr Ala Ala Asp Leu Met Lys Leu Ala Met Val Lys Leu Phe 
                485                 490                 495     


Pro Arg Leu Arg Glu Met Gly Ala Arg Met Leu Leu Gln Val His Asp 
            500                 505                 510         


Glu Leu Leu Leu Glu Ala Pro Gln Ala Arg Ala Glu Glu Val Ala Ala 
        515                 520                 525             


Leu Ala Lys Glu Ala Met Glu Lys Ala Tyr Pro Leu Ala Val Pro Leu 
    530                 535                 540                 


Glu Val Glu Val Gly Ile Gly Glu Asp Trp Leu Ser Ala Lys Gly 
545                 550                 555                 


<210>  27
<211>  550
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  27

Met Lys Ser Ser His His His His His His Pro Leu Glu Glu Ala Pro 
1               5                   10                  15      


Trp Pro Pro Pro Glu Gly Ala Phe Val Gly Phe Val Leu Ser Arg Pro 
            20                  25                  30          


Glu Pro Met Trp Ala Glu Leu Lys Ala Leu Ala Ala Cys Arg Asp Gly 
        35                  40                  45              


Arg Val His Arg Ala Glu Asp Pro Leu Ala Gly Leu Gly Asp Leu Glu 
    50                  55                  60                  


Glu Val Arg Gly Leu Leu Ala Lys Asp Leu Ala Val Leu Ala Leu Arg 
65                  70                  75                  80  


Glu Gly Leu Asp Leu Ala Pro Gly Asp Asp Pro Met Leu Leu Ala Tyr 
                85                  90                  95      


Leu Leu Asp Pro Ser Asn Thr Thr Pro Glu Gly Val Ala Arg Arg Tyr 
            100                 105                 110         


Gly Gly Glu Trp Thr Glu Asp Ala Ala His Arg Ala Leu Leu Ser Glu 
        115                 120                 125             


Arg Leu His Arg Asn Leu Leu Lys Arg Leu Glu Gly Glu Glu Lys Leu 
    130                 135                 140                 


Leu Trp Leu Tyr His Glu Val Glu Lys Pro Leu Ser Arg Val Leu Ala 
145                 150                 155                 160 


His Met Glu Ala Thr Gly Val Arg Leu Asp Val Ala Tyr Leu Gln Ala 
                165                 170                 175     


Leu Ser Leu Glu Leu Ala Glu Glu Ile Arg Arg Leu Glu Glu Glu Val 
            180                 185                 190         


Phe Arg Leu Ala Gly His Pro Phe Asn Leu Asn Ser Arg Asp Gln Leu 
        195                 200                 205             


Glu Arg Val Leu Phe Asp Glu Leu Arg Leu Pro Ala Leu Gly Lys Thr 
    210                 215                 220                 


Gln Lys Thr Gly Lys Arg Ser Thr Ser Ala Ala Val Leu Glu Ala Leu 
225                 230                 235                 240 


Arg Glu Ala His Pro Ile Val Glu Lys Ile Leu Gln His Arg Glu Leu 
                245                 250                 255     


Thr Lys Leu Lys Asn Thr Tyr Val Asp Pro Leu Pro Ser Leu Val His 
            260                 265                 270         


Pro Arg Thr Gly Arg Leu His Thr Arg Phe Asn Gln Thr Ala Thr Ala 
        275                 280                 285             


Thr Gly Arg Leu Ser Ser Ser Asp Pro Asn Leu Gln Asn Ile Pro Val 
    290                 295                 300                 


Arg Thr Pro Leu Gly Gln Arg Ile Arg Arg Ala Phe Val Ala Glu Ala 
305                 310                 315                 320 


Gly Trp Ala Leu Val Ala Leu Asp Tyr Ser Gln Ile Glu Leu Arg Val 
                325                 330                 335     


Leu Ala His Leu Ser Gly Asp Glu Asn Leu Ile Arg Val Phe Gln Glu 
            340                 345                 350         


Gly Lys Asp Ile His Thr Gln Thr Ala Ser Trp Met Phe Gly Val Pro 
        355                 360                 365             


Pro Glu Ala Val Asp Pro Leu Met Arg Arg Ala Ala Lys Thr Ile Asn 
    370                 375                 380                 


Phe Gly Ile Val Tyr Gly Met Ser Pro Tyr Gly Leu Ala Lys Glu Leu 
385                 390                 395                 400 


Lys Ile Gly Arg Arg Glu Ala Lys Ala Phe Ile Glu Arg Tyr Phe Glu 
                405                 410                 415     


Arg Tyr Pro Gly Val Lys Arg Tyr Met Glu Gln Ile Val Ala Glu Ala 
            420                 425                 430         


Arg Glu Lys Gly Tyr Val Glu Thr Leu Phe Gly Arg Arg Arg Tyr Val 
        435                 440                 445             


Pro Asp Leu Asn Ala Arg Val Lys Ser Val Arg Glu Ala Ala Glu Arg 
    450                 455                 460                 


Met Ala Phe Asn Met Pro Val Gln Gly Thr Ala Ala Asp Leu Met Lys 
465                 470                 475                 480 


Leu Ala Met Val Lys Leu Phe Pro Arg Leu Arg Glu Met Gly Ala Arg 
                485                 490                 495     


Met Leu Leu Gln Val His Asp Glu Leu Leu Leu Glu Ala Pro Gln Ala 
            500                 505                 510         


Arg Ala Glu Glu Val Ala Ala Leu Ala Lys Glu Ala Met Glu Lys Ala 
        515                 520                 525             


Tyr Pro Leu Ala Val Pro Leu Glu Val Glu Val Gly Ile Gly Glu Asp 
    530                 535                 540                 


Trp Leu Ser Ala Lys Gly 
545                 550 


<210>  28
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  28
accaacacct cacatcacac ataata                                            26


<210>  29
<211>  27
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  29
accacaccta ccaccactaa taactaa                                           27


