                         SEQUENCE LISTING

<110>  HOU, Ming-Hung
 
<120>  ANTI-VIRAL COMPOUNDS AND METHODS FOR SCREENING SAME AND TREATING 
       VIRAL INFECTIONS

<130>  80079

<150>  US 63/048,169
<151>  2020-07-05

<160>  15    

<170>  PatentIn version 3.5

<210>  1
<211>  140
<212>  PRT
<213>  Middle East respiratory syndrome-related coronavirus

<400>  1

Met Ala Ser Pro Ala Ala Pro Arg Ala Val Ser Phe Ala Asp Asn Asn 
1               5                   10                  15      


Asp Ile Thr Asn Thr Asn Leu Ser Arg Gly Arg Gly Arg Asn Pro Lys 
            20                  25                  30          


Pro Arg Ala Ala Pro Asn Asn Thr Val Ser Trp Tyr Thr Gly Leu Thr 
        35                  40                  45              


Gln His Gly Lys Val Pro Leu Thr Phe Pro Pro Gly Gln Gly Val Pro 
    50                  55                  60                  


Leu Asn Ala Asn Ser Thr Pro Ala Gln Asn Ala Gly Tyr Trp Arg Arg 
65                  70                  75                  80  


Gln Asp Arg Lys Ile Asn Thr Gly Asn Gly Ile Lys Gln Leu Ala Pro 
                85                  90                  95      


Arg Trp Tyr Phe Tyr Tyr Thr Gly Thr Gly Pro Glu Ala Ala Leu Pro 
            100                 105                 110         


Phe Arg Ala Val Lys Asp Gly Ile Val Trp Val His Glu Asp Gly Ala 
        115                 120                 125             


Thr Asp Ala Pro Ser Thr Phe Gly Thr Arg Asn Pro 
    130                 135                 140 


<210>  2
<211>  166
<212>  PRT
<213>  Human coronavirus

<400>  2

Met Ser Phe Thr Pro Gly Lys Gln Ser Ser Ser Arg Ala Ser Ser Gly 
1               5                   10                  15      


Asn Arg Ser Gly Asn Gly Ile Leu Lys Trp Ala Asp Gln Ser Asp Gln 
            20                  25                  30          


Phe Arg Asn Val Gln Thr Arg Gly Arg Arg Ala Gln Pro Lys Gln Thr 
        35                  40                  45              


Ser Thr Ser Gln Gln Pro Leu Gly Gly Asn Val Val Pro Tyr Tyr Ser 
    50                  55                  60                  


Trp Phe Ser Gly Ile Thr Gln Phe Gln Lys Gly Lys Glu Phe Glu Phe 
65                  70                  75                  80  


Ala Glu Gly Gln Gly Val Pro Ile Ala Pro Gly Val Pro Ala Thr Glu 
                85                  90                  95      


Ala Lys Gly Tyr Trp Tyr Arg His Asn Arg Arg Ser Phe Lys Thr Ala 
            100                 105                 110         


Asp Gly Asn Gln Arg Gln Leu Leu Pro Arg Trp Tyr Phe Tyr Tyr Leu 
        115                 120                 125             


Gly Thr Gly Pro His Ala Lys Asp Gln Tyr Gly Thr Asp Ile Asp Gly 
    130                 135                 140                 


Val Phe Trp Val Ala Ser Asn Gln Ala Asp Val Asn Thr Pro Ala Asp 
145                 150                 155                 160 


Ile Val Asp Arg Asp Pro 
                165     


<210>  3
<211>  169
<212>  PRT
<213>  Murine hepatitis virus

<400>  3

Met Ser Phe Val Pro Gly Gln Glu Asn Ala Gly Ser Arg Ser Ser Ser 
1               5                   10                  15      


Gly Ser Arg Ser Gly Asn Gly Ile Leu Lys Lys Thr Thr Trp Ala Asp 
            20                  25                  30          


Gln Thr Glu Arg Ala Gly Asn Asn Gly Asn Arg Gly Arg Arg Asn Gln 
        35                  40                  45              


Pro Lys Gln Thr Ala Thr Thr Gln Pro Asn Ser Gly Ser Val Val Pro 
    50                  55                  60                  


His Tyr Ser Trp Phe Ser Gly Ile Thr Gln Phe Gln Lys Gly Lys Glu 
65                  70                  75                  80  


Phe Gln Phe Val Gln Gly Gln Gly Val Pro Ile Ala Asn Gly Ile Pro 
                85                  90                  95      


Ala Ser Glu Gln Lys Gly Tyr Trp Tyr Arg His Asn Arg Arg Ser Phe 
            100                 105                 110         


Lys Thr Pro Asp Gly Gln Gln Lys Gln Leu Leu Pro Arg Trp Tyr Phe 
        115                 120                 125             


Tyr Tyr Leu Gly Thr Gly Pro His Ala Gly Ala Glu Tyr Gly Asp Asp 
    130                 135                 140                 


Ile Glu Gly Val Val Trp Val Ala Ser Gln Gln Ala Asp Thr Lys Thr 
145                 150                 155                 160 


Thr Ala Asp Ile Val Glu Arg Asp Pro 
                165                 


<210>  4
<211>  152
<212>  PRT
<213>  Severe acute respiratory syndrome coronavirus

<400>  4

Met Ser Asp Asn Gly Pro Gln Ser Asn Gln Arg Ser Ala Pro Arg Ile 
1               5                   10                  15      


Thr Phe Gly Glu Pro Thr Asp Ser Thr Asp Asn Asn Gln Asn Gly Gly 
            20                  25                  30          


Arg Asn Gly Ala Arg Pro Lys Gln Arg Arg Pro Gln Gly Leu Pro Asn 
        35                  40                  45              


Asn Thr Ala Ser Trp Phe Thr Ala Leu Thr Gln His Gly Lys Glu Glu 
    50                  55                  60                  


Leu Arg Phe Pro Arg Gly Gln Gly Val Pro Ile Asn Thr Asn Ser Gly 
65                  70                  75                  80  


Pro Asp Asp Gln Ile Gly Tyr Tyr Arg Arg Ala Thr Arg Arg Val Arg 
                85                  90                  95      


Gly Gly Asp Gly Lys Met Lys Glu Leu Ser Pro Arg Trp Tyr Phe Tyr 
            100                 105                 110         


Tyr Leu Gly Thr Gly Pro Glu Ala Ser Leu Pro Tyr Gly Ala Asn Lys 
        115                 120                 125             


Glu Gly Ile Val Trp Val Ala Thr Glu Gly Ala Leu Asn Thr Pro Lys 
    130                 135                 140                 


Asp His Ile Gly Thr Arg Asn Pro 
145                 150         


<210>  5
<211>  164
<212>  PRT
<213>  Bat coronavirus

<400>  5

Met Ser Gly Arg Asn Lys Pro Arg Pro Gly Ser Gln Ser Pro Lys Val 
1               5                   10                  15      


Thr Phe Lys Gln Glu Ser Asp Gly Ser Asp Ser Glu Ser Glu Arg Arg 
            20                  25                  30          


Asn Gly Asn Arg Asn Gly Ala Arg Pro Lys Asn Asn Asn Gly Arg Gly 
        35                  40                  45              


Ala Gly Ser Lys Pro Glu Lys Pro Lys Ala Ala Pro Pro Gln Asn Val 
    50                  55                  60                  


Ser Trp Tyr Ala Pro Leu Val Gln Thr Gly Lys Asn Asp Leu Arg Phe 
65                  70                  75                  80  


Pro Arg Gly Gln Gly Val Pro Ile Ser Gln Gly Ile Asp Asp Ile Tyr 
                85                  90                  95      


Asn His Gly Tyr Trp Val Arg Thr Gln Arg Asn Phe Gln Lys Gly Gly 
            100                 105                 110         


Lys Gln Val Ala Ala Asn Pro Arg Trp Tyr Phe Tyr Tyr Thr Gly Thr 
        115                 120                 125             


Gly Arg Tyr Ala Asp Leu Arg Tyr Gly Ser Lys Asn Pro Asp Ile Ile 
    130                 135                 140                 


Trp Val Gly Ala Glu Gly Ala Asn Ile Asn Arg Val Gly Asp Ile Gly 
145                 150                 155                 160 


Thr Arg Asn Pro 
                


<210>  6
<211>  39
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  N39A-Forward

<400>  6
ccgcgcggca gccatatggc gaccgtgagc tggtatacc                              39


<210>  7
<211>  39
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  N39A-Reverse

<400>  7
ggtataccag ctcacggtcg ccatatggct gccgcgcgg                              39


<210>  8
<211>  39
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  N39G-Forward

<400>  8
ccgcgcggca gccatatggg caccgtgagc tggtatacc                              39


<210>  9
<211>  39
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  N39G-Reverse

<400>  9
ggtataccag ctcacggtgc ccatatggct gccgcgcgg                              39


<210>  10
<211>  39
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  W43A-Forward

<400>  10
catatgaaca ccgtgagcgc gtataccggc ctgacccag                              39


<210>  11
<211>  39
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  W43A-Reverse

<400>  11
ctgggtcagg ccggtatacg cgctcacggt gttcatatg                              39


<210>  12
<211>  19
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  GAPDH-F

<400>  12
gaaggtgaag gtcggagtc                                                    19


<210>  13
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  GAPDH-R

<400>  13
gaagatggtg atgggatttc                                                   20


<210>  14
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  MERS-CoV-F

<400>  14
ccactactcc catttcgtca g                                                 21


<210>  15
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  MERS-CoV-R

<400>  15
cagtatgtgt agtgcgcata taagca                                            26


