                         SEQUENCE LISTING

<110>  MultiplexDX, s.r.o.
 
<120>  Means and methods for detecting novel coronavirus (SARS-CoV-2)

<130>  MUL17082PCT

<150>  EP20172733
<151>  2020-05-04

<160>  162   

<170>  PatentIn version 3.5

<210>  1
<211>  22
<212>  DNA
<213>  artificial

<220>
<223>  forward primer nucleotide sequence for SARS-CoV-2 RdRP

<400>  1
gtgaaatggt catgtgtggc gg                                                22


<210>  2
<211>  27
<212>  DNA
<213>  artificial

<220>
<223>  reverse primer nucleotide sequence for SARS-CoV-2 RdRP

<400>  2
cgtgacagct tgacaaatgt taaaaac                                           27


<210>  3
<211>  25
<212>  DNA
<213>  artificial

<220>
<223>  probe for SARS-CoV-2 RdRP

<400>  3
caggtggaac ctcatcagga gatgc                                             25


<210>  4
<211>  26
<212>  DNA
<213>  artificial

<220>
<223>  forward primer nucleotide sequence for SARS-CoV-2 E gene

<400>  4
acaggtacgt taatagttaa tagcgt                                            26


<210>  5
<211>  22
<212>  DNA
<213>  artificial

<220>
<223>  reverse primer nucleotide sequence for SARS-CoV-2 E gene

<400>  5
atattgcagc agtacgcaca ca                                                22


<210>  6
<211>  26
<212>  DNA
<213>  artificial

<220>
<223>  ACACTAGCCATCCTTACTGCGCTTCG

<400>  6
acactagcca tccttactgc gcttcg                                            26


<210>  7
<211>  19
<212>  DNA
<213>  artificial

<220>
<223>  forward primer nucleotide sequence for human RNAse P

<400>  7
agatttggac ctgcgagcg                                                    19


<210>  8
<211>  20
<212>  DNA
<213>  artificial

<220>
<223>  reverse primer nucleotide sequence for human RNAse P

<400>  8
gagcggctgt ctccacaagt                                                   20


<210>  9
<211>  23
<212>  DNA
<213>  artificial

<220>
<223>  probe for human RNAse P

<400>  9
ttctgacctg aaggctctgc gcg                                               23


<210>  10
<211>  80
<212>  RNA
<213>  artificial

<220>
<223>  positive control ribonucleotide for SARS-CoV-2 RdRP

<400>  10
agugaaaugg ucaugugugg cggaccaggu ggaaccucau caggagaugc caguuuuuaa       60

cauuugucaa gcugucacgg                                                   80


<210>  11
<211>  80
<212>  RNA
<213>  artificial

<220>
<223>  positive control ribonucleotide for SARS-CoV-2 E gene

<400>  11
agacagguac guuaauaguu aauagcguuu acacuagcca uccuuacugc gcuucgauug       60

ugugcguacu gcugcaauau                                                   80


<210>  12
<211>  67
<212>  RNA
<213>  artificial

<220>
<223>  positive control ribonucleotide for human RNAse P

<400>  12
gcagauuugg accugcgagc ggguucugac cugaaggcuc ugcgcggacu uguggagaca       60

gccgcuc                                                                 67


<210>  13
<211>  26
<212>  DNA
<213>  artificial

<220>
<223>  reverse primer nucleotide sequence for SARS-CoV-2 RdRP

<400>  13
caaatgttaa aaacactatt agcata                                            26


<210>  14
<211>  22
<212>  DNA
<213>  artificial

<220>
<223>  forward primer nucleotide sequence for SARS-CoV-2 RdRP


<220>
<221>  misc
<222>  (5)..(5)
<223>  R is A or T

<400>  14
gtgaratggt catgtgtggc gg                                                22


<210>  15
<211>  26
<212>  DNA
<213>  artificial

<220>
<223>  reverse primer nucleotide sequence for SARS-CoV-2 RdRP


<220>
<221>  misc
<222>  (3)..(3)
<223>  R is G or A

<220>
<221>  misc
<222>  (12)..(12)
<223>  S is G or C

<400>  15
caratgttaa asacactatt agcata                                            26


<210>  16
<211>  26
<212>  DNA
<213>  artificial

<220>
<223>  probe for SARS-CoV-2 E gene


<220>
<221>  misc
<222>  (9)..(9)
<223>  W is A or T

<220>
<221>  misc
<222>  (12)..(12)
<223>  R is G or A

<220>
<221>  misc
<222>  (18)..(18)
<223>  M is A or C

<400>  16
ccaggtggwa crtcatcmgg tgatgc                                            26


<210>  17
<211>  21
<212>  DNA
<213>  artificial

<220>
<223>  forward primer nucleotide sequence for unique spike RNA

<400>  17
atgcagtgcc acattatgca g                                                 21


<210>  18
<211>  20
<212>  DNA
<213>  artificial

<220>
<223>  reverse primer nucleotide sequence for unique spike RNA

<400>  18
agcacatgta gtgccactgg                                                   20


<210>  19
<211>  26
<212>  DNA
<213>  artificial

<220>
<223>  probe for unique spike RNA

<400>  19
ccacggttac atccagtggc actaca                                            26


<210>  20
<211>  89
<212>  RNA
<213>  artificial

<220>
<223>  spike RNA

<400>  20
uaugcagugc cacauuaugc agugccacgg uuacauccag uggcacuaca ugugccauua       60

cauuuacauc caguggcacu acaugugcu                                         89


<210>  21
<211>  89
<212>  DNA
<213>  artificial

<220>
<223>  synthetic nucleic acid sequence serving as template for spike RNA

<400>  21
tatgcagtgc cacattatgc agtgccacgg ttacatccag tggcactaca tgtgccatta       60

catttacatc cagtggcact acatgtgct                                         89


<210>  22
<211>  26
<212>  DNA
<213>  artificial

<220>
<223>  forward primer nucleotide sequence for SARS-CoV-2 E gene

<400>  22
gtactcattc gtttcggaag agacag                                            26


<210>  23
<211>  78
<212>  RNA
<213>  artificial

<220>
<223>  positive control ribonucleotide for SARS-CoV-2 E gene

<400>  23
auguacucau ucguuucgga agacaguuac acuagccauc cuuacugcgc uucgauugug       60

ugcguacugc ugcaauau                                                     78


<210>  24
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  E_Sarbeco_F3 primer

<400>  24
gtactcattc gtttcggaag agacag                                            26


<210>  25
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  E_Sarbeco_R2 primer

<400>  25
atattgcagc agtacgcaca ca                                                22


<210>  26
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  E_Sarbeco_P1 probe

<400>  26
acactagcca tccttactgc gcttcg                                            26


<210>  27
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RdRP_SARSr-F2 primer

<400>  27
gtgaaatggt catgtgtggc gg                                                22


<210>  28
<211>  27
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RdRP_SARSr-R2 primer

<400>  28
cgtgacagct tgacaaatgt taaaaac                                           27


<210>  29
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RdRP_SARSr-P2 probe

<400>  29
caggtggaac ctcatcagga gatgc                                             25


<210>  30
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  E_Sarbeco_F7 primer


<220>
<221>  misc_feature
<222>  (2)..(2)
<223>  T at position 2 is a locked nucleic acid

<220>
<221>  misc_feature
<222>  (4)..(4)
<223>  T at position 4 is a locked nucleic acid

<400>  30
atgtactcat tcgtttcgga aga                                               23


<210>  31
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  E_Sarbeco_R2 primer

<400>  31
atattgcagc agtacgcaca ca                                                22


<210>  32
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  E_Sarbeco_P1 probe

<400>  32
acactagcca tccttactgc gcttcg                                            26


<210>  33
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RdRP_SARSr-F2 primer

<400>  33
gtgaaatggt catgtgtggc gg                                                22


<210>  34
<211>  27
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RdRP_SARSr-R2 primer

<400>  34
cgtgacagct tgacaaatgt taaaaac                                           27


<210>  35
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RdRP_SARSr-P8 probe

<400>  35
tcaggagatg ccacaactgc ttatgc                                            26


<210>  36
<211>  19
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RNase P Forward primer

<400>  36
agatttggac ctgcgagcg                                                    19


<210>  37
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RNase P Reverse primer

<400>  37
gagcggctgt ctccacaagt                                                   20


<210>  38
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RNase P Probe 1

<400>  38
ttctgacctg aaggctctgc gcg                                               23


<210>  39
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  E_Sarbeco_F7 primer


<220>
<221>  misc_feature
<222>  (2)..(2)
<223>  T at position 2 is a locked nucleic acid

<220>
<221>  misc_feature
<222>  (4)..(4)
<223>  T at position 2 is a locked nucleic acid

<400>  39
atgtactcat tcgtttcgga aga                                               23


<210>  40
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  E_Sarbeco_R2 primer

<400>  40
atattgcagc agtacgcaca ca                                                22


<210>  41
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  E_Sarbeco_P1 probe

<400>  41
acactagcca tccttactgc gcttcg                                            26


<210>  42
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  E_Sarbeco_P2 probe

<400>  42
tagcgtactt ctttttcttg ctttcgtggt                                        30


<210>  43
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RdRP_SARSr-F2 probe

<400>  43
gtgaaatggt catgtgtggc gg                                                22


<210>  44
<211>  27
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RdRP_SARSr-R2 primer

<400>  44
cgtgacagct tgacaaatgt taaaaac                                           27


<210>  45
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RdRP_SARSr-P2 probe

<400>  45
caggtggaac ctcatcagga gatgc                                             25


<210>  46
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RdRP_SARSr-P8 probe

<400>  46
tcaggagatg ccacaactgc ttatgc                                            26


<210>  47
<211>  19
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RNase P Forward primer

<400>  47
agatttggac ctgcgagcg                                                    19


<210>  48
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RNase P Reverse primer

<400>  48
gagcggctgt ctccacaagt                                                   20


<210>  49
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RNase P Probe 1

<400>  49
ttctgacctg aaggctctgc gcg                                               23


<210>  50
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  E_Sarbeco_F7 primer


<220>
<221>  misc_feature
<222>  (2)..(2)
<223>  T at position 2 is a locked nucleic acid

<220>
<221>  misc_feature
<222>  (4)..(4)
<223>  T at position 4 is a locked nucleic acid

<400>  50
atgtactcat tcgtttcgga aga                                               23


<210>  51
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  E_Sarbeco_R2 primer

<400>  51
atattgcagc agtacgcaca ca                                                22


<210>  52
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  E_Sarbeco_P1 probe

<400>  52
acactagcca tccttactgc gcttcg                                            26


<210>  53
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  E_Sarbeco_P2 probe

<400>  53
tagcgtactt ctttttcttg ctttcgtggt                                        30


<210>  54
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RdRP_SARSr-F2 primer

<400>  54
gtgaaatggt catgtgtggc gg                                                22


<210>  55
<211>  27
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RdRP_SARSr-R2 primer

<400>  55
cgtgacagct tgacaaatgt taaaaac                                           27


<210>  56
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RdRP_SARSr-P2 probe

<400>  56
caggtggaac ctcatcagga gatgc                                             25


<210>  57
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RdRP_SARSr-P8 probe

<400>  57
tcaggagatg ccacaactgc ttatgc                                            26


<210>  58
<211>  19
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RNase P Forward primer

<400>  58
agatttggac ctgcgagcg                                                    19


<210>  59
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RNase P Reverse primer

<400>  59
gagcggctgt ctccacaagt                                                   20


<210>  60
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RNase P Probe 1.1

<400>  60
ttctgacctg aaggctctgc gcg                                               23


<210>  61
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  E_Sarbeco_F7 primer


<220>
<221>  misc_feature
<222>  (2)..(2)
<223>  T at position 2 is a locked nucleic acid

<220>
<221>  misc_feature
<222>  (4)..(4)
<223>  T at position 4 is a locked nucleic acid

<400>  61
atgtactcat tcgtttcgga aga                                               23


<210>  62
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  E_Sarbeco_R2 primer

<400>  62
atattgcagc agtacgcaca ca                                                22


<210>  63
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  E_Sarbeco_P1.2 probe

<400>  63
acactagcca tccttactgc gcttcg                                            26


<210>  64
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  E_Sarbeco_P2.2 probe

<400>  64
tagcgtactt ctttttcttg ctttcgtggt                                        30


<210>  65
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RdRP_SARSr-F2 primer

<400>  65
gtgaaatggt catgtgtggc gg                                                22


<210>  66
<211>  27
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RdRP_SARSr-R2 primer

<400>  66
cgtgacagct tgacaaatgt taaaaac                                           27


<210>  67
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RdRP_SARSr-P2 probe

<400>  67
caggtggaac ctcatcagga gatgc                                             25


<210>  68
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RdRP_SARSr-P8 probe

<400>  68
tcaggagatg ccacaactgc ttatgc                                            26


<210>  69
<211>  19
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RNase P Forward primer

<400>  69
agatttggac ctgcgagcg                                                    19


<210>  70
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RNase P Reverse primer

<400>  70
gagcggctgt ctccacaagt                                                   20


<210>  71
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RNase P Probe 1.2

<400>  71
ttctgacctg aaggctctgc gcg                                               23


<210>  72
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  E_Sarbeco_F7 primer


<220>
<221>  misc_feature
<222>  (2)..(2)
<223>  T at position 2 is a locked nucleic acid

<220>
<221>  misc_feature
<222>  (4)..(4)
<223>  T at position 4 is a locked nucleic acid

<400>  72
atgtactcat tcgtttcgga aga                                               23


<210>  73
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  E_Sarbeco_R2 primer

<400>  73
atattgcagc agtacgcaca ca                                                22


<210>  74
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  E_Sarbeco_P1 probe

<400>  74
acactagcca tccttactgc gcttcg                                            26


<210>  75
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  E_Sarbeco_P2 primer

<400>  75
tagcgtactt ctttttcttg ctttcgtggt                                        30


<210>  76
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RdRP_SARSr-F2 primer

<400>  76
gtgaaatggt catgtgtggc gg                                                22


<210>  77
<211>  27
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RdRP_SARSr-R2 primer

<400>  77
cgtgacagct tgacaaatgt taaaaac                                           27


<210>  78
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RdRP_SARSr-P2 probe

<400>  78
caggtggaac ctcatcagga gatgc                                             25


<210>  79
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RdRP_SARSr-P8 probe

<400>  79
tcaggagatg ccacaactgc ttatgc                                            26


<210>  80
<211>  19
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RNase P Forward primer

<400>  80
agatttggac ctgcgagcg                                                    19


<210>  81
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RNase P Reverse primer

<400>  81
gagcggctgt ctccacaagt                                                   20


<210>  82
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RNase P Probe 1.2

<400>  82
ttctgacctg aaggctctgc gcg                                               23


<210>  83
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  IAV-F1.1 primer

<400>  83
ttctagcatg gtggaggcca t                                                 21


<210>  84
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  IAV-R1.2 primer

<400>  84
ccgtctgagt tcttcaatgg tgg                                               23


<210>  85
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  IAV-Probe1.2

<400>  85
tctagggccc ggattgatgc ca                                                22


<210>  86
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  IBV-F2.1 primer

<400>  86
agtggactca ggaaagtggc                                                   20


<210>  87
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  IBV-R2.3 primer


<220>
<221>  misc_feature
<222>  (6)..(6)
<223>  T at position 6 is a locked nucleic acid

<220>
<221>  misc_feature
<222>  (9)..(9)
<223>  T at position 9 is a locked nucleic acid

<400>  87
tccatttgtt gcattgattg aagc                                              24


<210>  88
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  IBV-Probe2.3


<220>
<221>  misc_feature
<222>  (4)..(4)
<223>  A at position 4 is a locked nucleic acid

<220>
<221>  misc_feature
<222>  (11)..(11)
<223>  A at position 11 is a locked nucleic acid

<400>  88
tccaaatgaa atggggaatg gaagct                                            26


<210>  89
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  E_Sarbeco_F1 primer

<400>  89
acaggtacgt taatagttaa tagcgt                                            26


<210>  90
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  E_Sarbeco_F2 primer

<400>  90
ctcattcgtt tcggaagaga cagg                                              24


<210>  91
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  E_Sarbeco_F3 primer

<400>  91
gtactcattc gtttcggaag agacag                                            26


<210>  92
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  E_Sarbeco_F4 primer

<400>  92
cgtttcggaa gagacaggta cg                                                22


<210>  93
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  E_Sarbeco_F5 primer

<400>  93
tgtactcatt cgtttcggaa gagaca                                            26


<210>  94
<211>  27
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  E_Sarbeco_F6 primer

<400>  94
tgtactcatt cgtttcggaa gagacag                                           27


<210>  95
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  E_Sarbeco_F7 primer


<220>
<221>  misc_feature
<222>  (2)..(2)
<223>  T at position 2 is a locked nucleic acid

<220>
<221>  misc_feature
<222>  (4)..(4)
<223>  T at position 4 is a locked nucleic acid

<400>  95
atgtactcat tcgtttcgga aga                                               23


<210>  96
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  E_Sarbeco_F8 primer


<220>
<221>  misc_feature
<222>  (2)..(2)
<223>  T at position 2 is a locked nucleic acid

<220>
<221>  misc_feature
<222>  (4)..(4)
<223>  T at position 4 is a locked nucleic acid

<400>  96
atgtactcat tcgtttcgga agac                                              24


<210>  97
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  E_Sarbeco_F9 primer


<220>
<221>  misc_feature
<222>  (4)..(4)
<223>  T at position 4 is a locked nucleic acid

<220>
<221>  misc_feature
<222>  (7)..(7)
<223>  T at position 7 is a locked nucleic acid

<220>
<221>  misc_feature
<222>  (10)..(10)
<223>  T at position 10 is a locked nucleic acid

<400>  97
atgtactcat tcgtttcgga                                                   20


<210>  98
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  E_Sarbeco_F10 primer


<220>
<221>  misc_feature
<222>  (2)..(2)
<223>  T at position 2 is a locked nucleic acid

<220>
<221>  misc_feature
<222>  (4)..(4)
<223>  T at position 4 is a locked nucleic acid

<220>
<221>  misc_feature
<222>  (7)..(7)
<223>  T at position 7 is a locked nucleic acid

<400>  98
atgtactcat tcgtttcgga                                                   20


<210>  99
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  E_Sarbeco_F11 primer


<220>
<221>  misc_feature
<222>  (4)..(4)
<223>  T at position 4 is a locked nucleic acid

<220>
<221>  misc_feature
<222>  (10)..(10)
<223>  T at position 10 is a locked nucleic acid

<220>
<221>  misc_feature
<222>  (16)..(16)
<223>  T at position 16 is a locked nucleic acid

<400>  99
atgtactcat tcgtttcgga                                                   20


<210>  100
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  E_Sarbeco_F12 primer


<220>
<221>  misc_feature
<222>  (2)..(2)
<223>  T at position 2 is a locked nucleic acid

<220>
<221>  misc_feature
<222>  (11)..(11)
<223>  T at position 11 is a locked nucleic acid

<220>
<221>  misc_feature
<222>  (16)..(16)
<223>  T at position 16 is a locked nucleic acid

<400>  100
atgtactcat tcgtttcgga                                                   20


<210>  101
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  E_Sarbeco_F13 primer


<220>
<221>  misc_feature
<222>  (4)..(4)
<223>  T at position 4 is a locked nucleic acid

<220>
<221>  misc_feature
<222>  (10)..(10)
<223>  T at position 10 is a locked nucleic acid

<220>
<221>  misc_feature
<222>  (15)..(15)
<223>  T at position 15 is a locked nucleic acid

<400>  101
atgtactcat tcgtttcgga                                                   20


<210>  102
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  E_Sarbeco_R2 primer

<400>  102
atattgcagc agtacgcaca ca                                                22


<210>  103
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  E_Sarbeco_P1 probe

<400>  103
acactagcca tccttactgc gcttcg                                            26


<210>  104
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  E_Sarbeco_P2 probe

<400>  104
tagcgtactt ctttttcttg ctttcgtggt                                        30


<210>  105
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Sarbeco_P1rev probe

<400>  105
cgaagcgcag taaggatggc tagtgt                                            26


<210>  106
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  E_Sarbeco_P3 probe


<220>
<221>  misc_feature
<222>  (14)..(14)
<223>  T at position 14 is a locked nucleic acid

<400>  106
tagcgtactt ctttttcttg ctttcgtggt                                        30


<210>  107
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  E_Sarbeco_P4 probe


<220>
<221>  misc_feature
<222>  (13)..(13)
<223>  T at position 13 is a locked nucleic acid

<220>
<221>  misc_feature
<222>  (15)..(15)
<223>  T at position 15 is a locked nucleic acid

<400>  107
tagcgtactt ctttttcttg ctttcgtggt                                        30


<210>  108
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  E_Sarbeco_P5 probe


<220>
<221>  misc_feature
<222>  (14)..(14)
<223>  T at position 14 is a locked nucleic acid

<400>  108
tagcgtactt ctttttcttg ctttcgtggt                                        30


<210>  109
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RdRP_SARSr-F2 primer

<400>  109
gtgaaatggt catgtgtggc gg                                                22


<210>  110
<211>  27
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RdRP_SARSr-R2 primer

<400>  110
cgtgacagct tgacaaatgt taaaaac                                           27


<210>  111
<211>  27
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RdRP_SARSr-R4 primer


<220>
<221>  misc_feature
<222>  (21)..(21)
<223>  T at position 21 is a locked nucleic acid

<400>  111
cgtgacagct tgacaaatgt taaaaac                                           27


<210>  112
<211>  27
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RdRP_SARSr-R5 primer


<220>
<221>  misc_feature
<222>  (18)..(18)
<223>  T at position 18 is a locked nucleic acid

<220>
<221>  misc_feature
<222>  (21)..(21)
<223>  T at position 21 is a locked nucleic acid

<400>  112
cgtgacagct tgacaaatgt taaaaac                                           27


<210>  113
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RdRP_SARSr-P2 probe

<400>  113
caggtggaac ctcatcagga gatgc                                             25


<210>  114
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RdRP_SARSr-P3 probe

<400>  114
caggtggaac ctcatcagga gatgc                                             25


<210>  115
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RdRP_SARSr-P4 probe

<400>  115
gtggaacctc atcaggagat gccac                                             25


<210>  116
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RdRP_SARSr-P5 probe

<400>  116
gtggaacctc atcaggagat gccac                                             25


<210>  117
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RdRP_SARSr-P6 probe

<400>  117
ggaacctcat caggagatgc cacaac                                            26


<210>  118
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RdRP_SARSr-P7 probe

<400>  118
ggaacctcat caggagatgc cacaac                                            26


<210>  119
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RdRP_SARSr-P8 probe

<400>  119
tcaggagatg ccacaactgc ttatgc                                            26


<210>  120
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RdRP_SARSr-P9 probe

<400>  120
tcaggagatg ccacaactgc ttatgc                                            26


<210>  121
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  IAV-F1.1 primer

<400>  121
ttctagcatg gtggaggcca t                                                 21


<210>  122
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  IAV-F1.2 primer

<400>  122
atttctagca tggtggaggc c                                                 21


<210>  123
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  IAV-F2.1 primer

<400>  123
aatcccctga atccctttgt                                                   20


<210>  124
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  IAV-F2.2 primer


<220>
<221>  misc_feature
<222>  (2)..(2)
<223>  A at position 2 is a locked nucleic acid

<220>
<221>  misc_feature
<222>  (11)..(11)
<223>  A at position 11 is a locked nucleic acid

<400>  124
aatcccctga atccctttgt                                                   20


<210>  125
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  IAV-F2.3 primer


<220>
<221>  misc_feature
<222>  (3)..(3)
<223>  T at position 3 is a locked nucleic acid

<220>
<221>  misc_feature
<222>  (12)..(12)
<223>  T at position 12 is a locked nucleic acid

<400>  125
aatcccctga atccctttgt                                                   20


<210>  126
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  IAV-R1.1 primer

<400>  126
cgtctgagtt cttcaatggt gg                                                22


<210>  127
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  IAV-R1.2 primer

<400>  127
ccgtctgagt tcttcaatgg tgg                                               23


<210>  128
<211>  18
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  IAV-R2.1 primer

<400>  128
tctggcatca atccgggc                                                     18


<210>  129
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  IAV-Probe1.1

<400>  129
agggcccgga ttgatgccag a                                                 21


<210>  130
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  IAV-Probe1.2

<400>  130
tctagggccc ggattgatgc ca                                                22


<210>  131
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  IAV-Probe1.3


<220>
<221>  misc_feature
<222>  (6)..(6)
<223>  T at position 6 is a locked nucleic acid

<220>
<221>  misc_feature
<222>  (13)..(13)
<223>  A at position 13 is a locked nucleic acid

<220>
<221>  misc_feature
<222>  (19)..(19)
<223>  T at position 19 is a locked nucleic acid

<220>
<221>  misc_feature
<222>  (22)..(22)
<223>  A at position 22 is a locked nucleic acid

<400>  131
aagagttctc tgagatcatg aagatc                                            26


<210>  132
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  IBV-F1.1 primer

<400>  132
aagcaatgcc agcatgggaa                                                   20


<210>  133
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  IBV-F1.2 primer


<220>
<221>  misc_feature
<222>  (3)..(3)
<223>  A at position 3 is a locked nucleic acid

<220>
<221>  misc_feature
<222>  (8)..(8)
<223>  A at position 8 is a locked nucleic acid

<400>  133
tgaatgaaag caatgccagc a                                                 21


<210>  134
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  IBV-F1.3 primer


<220>
<221>  misc_feature
<222>  (2)..(2)
<223>  A at position 2 is a locked nucleic acid

<220>
<221>  misc_feature
<222>  (6)..(6)
<223>  A at position 6 is a locked nucleic acid

<400>  134
gaatgaaagc aatgccagca                                                   20


<210>  135
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  IBV-F2.1 primer

<400>  135
agtggactca ggaaagtggc                                                   20


<210>  136
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  IBV-F2.2 primer


<220>
<221>  misc_feature
<222>  (3)..(3)
<223>  T at position 3 is a locked nucleic acid

<220>
<221>  misc_feature
<222>  (9)..(9)
<223>  T at position 9 is a locked nucleic acid

<400>  136
tttaggattg gctccctatt tgt                                               23


<210>  137
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  IBV-F2.3 primer


<220>
<221>  misc_feature
<222>  (3)..(3)
<223>  T at position 3 is a locked nucleic acid

<220>
<221>  misc_feature
<222>  (9)..(9)
<223>  T at position 9 is a locked nucleic acid

<400>  137
tttaggattg gctccctatt tgtg                                              24


<210>  138
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  IBV-F2.4 primer

<400>  138
actgtgttta ggattggctc ccta                                              24


<210>  139
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  IBV-R1.1 primer

<400>  139
gggagccaat cctaaacaca gt                                                22


<210>  140
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  IBV-R1.2 primer


<220>
<221>  misc_feature
<222>  (2)..(2)
<223>  A at position 2 is a locked nucleic acid

<220>
<221>  misc_feature
<222>  (7)..(7)
<223>  A at position 7 is a locked nucleic acid

<400>  140
gagccaatcc taaacacagt                                                   20


<210>  141
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  IBV-R1.3 primer


<220>
<221>  misc_feature
<222>  (2)..(2)
<223>  A at position 2 is a locked nucleic acid

<220>
<221>  misc_feature
<222>  (7)..(7)
<223>  A at position 7 is a locked nucleic acid

<220>
<221>  misc_feature
<222>  (12)..(12)
<223>  A at position 12 is a locked nucleic acid

<400>  141
gagccaatcc taaacacagt                                                   20


<210>  142
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  IBV-R2.1 primer

<400>  142
tccatttgtt gcattgattg aagc                                              24


<210>  143
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  IBV-R2.2 primer

<400>  143
tccatttgtt gcattgattg aagca                                             25


<210>  144
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  IBV-R2.3 primer


<220>
<221>  misc_feature
<222>  (6)..(6)
<223>  T at position 6 is a locked nucleic acid

<220>
<221>  misc_feature
<222>  (9)..(9)
<223>  T at position 9 is a locked nucleic acid

<400>  144
tccatttgtt gcattgattg aagc                                              24


<210>  145
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  IBV-Probe1.1

<400>  145
agagtggact caggaaagtg gcc                                               23


<210>  146
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  IBV-Probe1.2

<400>  146
cagagtggac tcaggaaagt ggcc                                              24


<210>  147
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  IBV-Probe2.1

<400>  147
tccaaatgaa atggggaatg gaagct                                            26


<210>  148
<211>  29
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  IBV-Probe2.2

<400>  148
agatccaaat gaaatgggga atggaagct                                         29


<210>  149
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  IBV-Probe2.3


<220>
<221>  misc_feature
<222>  (4)..(4)
<223>  A at position 4 is a locked nucleic acid

<220>
<221>  misc_feature
<222>  (11)..(11)
<223>  A at position 11 is a locked nucleic acid

<400>  149
tccaaatgaa atggggaatg gaagct                                            26


<210>  150
<211>  29
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  IBV-Probe2.4

<400>  150
tgcagagtga atggcacaaa taagatcca                                         29


<210>  151
<211>  28
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  IBV-Probe2.5

<400>  151
tgccgagtga atggcacaaa taagatcc                                          28


<210>  152
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  IBV-Probe2.6

<400>  152
actgtgttta ggattggctc cctatttgtg                                        30


<210>  153
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  IBV-Probe2.7


<220>
<221>  misc_feature
<222>  (4)..(4)
<223>  T at position 4 is a locked nucleic acid

<220>
<221>  misc_feature
<222>  (14)..(14)
<223>  T at position 14 is a locked nucleic acid

<220>
<221>  misc_feature
<222>  (24)..(24)
<223>  T at position 24 is a locked nucleic acid

<400>  153
ctgtgtttag gattggctcc ctatt                                             25


<210>  154
<211>  19
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RNAse P Forward primer

<400>  154
agatttggac ctgcgagcg                                                    19


<210>  155
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RNAse P Reverse primer

<400>  155
gagcggctgt ctccacaagt                                                   20


<210>  156
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  RNAse P Probe

<400>  156
ttctgacctg aaggctctgc gcg                                               23


<210>  157
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  SARS-CoV-2 S gene - F1


<220>
<221>  misc_feature
<222>  (4)..(4)
<223>  T at position 4 is LNA

<220>
<221>  misc_feature
<222>  (6)..(6)
<223>  T at position 6 is LNA

<400>  157
tcttttccaa tgttacttgg ttc                                               23


<210>  158
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  SARS-CoV-2 S gene - R1

<400>  158
agtagggact gggtcttcga atct                                              24


<210>  159
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  B.1.1.7 - F3


<220>
<221>  misc_feature
<222>  (3)..(3)
<223>  T at position 3 is LNA

<220>
<221>  misc_feature
<222>  (7)..(7)
<223>  T at position 7 is LNA

<400>  159
gttacttggt tccatgctat ctc                                               23


<210>  160
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  B.1.1.7 - R36


<220>
<221>  misc_feature
<222>  (5)..(5)
<223>  T at position 5 is LNA

<220>
<221>  misc_feature
<222>  (8)..(8)
<223>  T at position 8 is LNA

<220>
<221>  misc_feature
<222>  (19)..(19)
<223>  T at position 19 is LNA

<400>  160
caacttttgt tgtttttgtg gtaagc                                            26


<210>  161
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  SARS-CoV-2 S gene / B.1.1.7 - P3 probe


<220>
<221>  misc_feature
<222>  (19)..(19)
<223>  T at position 19 is LNA

<220>
<221>  misc_feature
<222>  (22)..(22)
<223>  T at position 22 is LNA

<400>  161
agaggtttga taaccctgtc ctacca                                            26


<210>  162
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  SARS-CoV-2 S gene / B.1.1.7- P4 probe


<220>
<221>  misc_feature
<222>  (2)..(2)
<223>  T at position 2 is LNA

<220>
<221>  misc_feature
<222>  (21)..(21)
<223>  T at position 21 is LNA

<400>  162
tttgcttcca ctgagaagtc taacat                                            26


