                         SEQUENCE LISTING

<110>  The Broad Institute, Inc.
 
<120>  MACHINE LEARNING ACCELERATED PROTEIN 
       ENGINEERING THROUGH FITNESS PREDICTION

<130>  B1195.70106WO00

<140>  Not Yet Assigned
<141>  Concurrently Herewith

<150>  US 63/017,510
<151>  2020-04-29

<160>  26    

<170>  PatentIn version 3.5

<210>  1
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  1

Thr Leu Ala Val Pro Phe Lys 
1               5           


<210>  2
<211>  7
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  2

Ser Val Ser Lys Pro Phe Leu 
1               5           


<210>  3
<211>  14
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  3
ttttttctac aggt                                                         14


<210>  4
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  4
ggaaccccta gtgatggagt t                                                 21


<210>  5
<211>  16
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  5
cggcctcagt gagcga                                                       16


<210>  6
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic


<220>
<221>  misc_feature
<222>  (9)..(10)
<223>  linked by ZEN

<400>  6
cactccctct ctgcgcgctc g                                                 21


<210>  7
<211>  68
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic


<220>
<221>  misc_feature
<222>  (29)..(36)
<223>  n is a, c, g, or t

<400>  7
ctttccctac acgacgctct tccgatctnn nnnnnnccaa cgaagaagaa attaaaacta       60

ctaacccg                                                                68


<210>  8
<211>  67
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic


<220>
<221>  misc_feature
<222>  (29)..(35)
<223>  n is a, c, g, or t

<400>  8
ctttccctac acgacgctct tccgatctnn nnnnnccaac gaagaagaaa ttaaaactac       60

taacccg                                                                 67


<210>  9
<211>  66
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic


<220>
<221>  misc_feature
<222>  (29)..(34)
<223>  n is a, c, g, or t

<400>  9
ctttccctac acgacgctct tccgatctnn nnnnccaacg aagaagaaat taaaactact       60

aacccg                                                                  66


<210>  10
<211>  65
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic


<220>
<221>  misc_feature
<222>  (29)..(33)
<223>  n is a, c, g, or t

<400>  10
ctttccctac acgacgctct tccgatctnn nnnccaacga agaagaaatt aaaactacta       60

acccg                                                                   65


<210>  11
<211>  64
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic


<220>
<221>  misc_feature
<222>  (29)..(32)
<223>  n is a, c, g, or t

<400>  11
ctttccctac acgacgctct tccgatctnn nnccaacgaa gaagaaatta aaactactaa       60

cccg                                                                    64


<210>  12
<211>  63
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic


<220>
<221>  misc_feature
<222>  (29)..(31)
<223>  n is a, c, g, or t

<400>  12
ctttccctac acgacgctct tccgatctnn nccaacgaag aagaaattaa aactactaac       60

ccg                                                                     63


<210>  13
<211>  62
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic


<220>
<221>  misc_feature
<222>  (29)..(30)
<223>  n is a, c, g, or t

<400>  13
ctttccctac acgacgctct tccgatctnn ccaacgaaga agaaattaaa actactaacc       60

cg                                                                      62


<210>  14
<211>  61
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic


<220>
<221>  misc_feature
<222>  (29)..(29)
<223>  n is a, c, g, or t

<400>  14
ctttccctac acgacgctct tccgatctnc caacgaagaa gaaattaaaa ctactaaccc       60

g                                                                       61


<210>  15
<211>  53
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  15
ggagttcaga cgtgtgctct tccgatctca tctctgtcct gccaaaccat acc              53


<210>  16
<211>  54
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic


<220>
<221>  misc_feature
<222>  (29)..(29)
<223>  n is a, c, g, or t

<400>  16
ggagttcaga cgtgtgctct tccgatctnc atctctgtcc tgccaaacca tacc             54


<210>  17
<211>  55
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic


<220>
<221>  misc_feature
<222>  (29)..(30)
<223>  n is a, c, g, or t

<400>  17
ggagttcaga cgtgtgctct tccgatctnn catctctgtc ctgccaaacc atacc            55


<210>  18
<211>  56
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic


<220>
<221>  misc_feature
<222>  (29)..(31)
<223>  n is a, c, g, or t

<400>  18
ggagttcaga cgtgtgctct tccgatctnn ncatctctgt cctgccaaac catacc           56


<210>  19
<211>  57
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic


<220>
<221>  misc_feature
<222>  (29)..(32)
<223>  n is a, c, g, or t

<400>  19
ggagttcaga cgtgtgctct tccgatctnn nncatctctg tcctgccaaa ccatacc          57


<210>  20
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic


<220>
<221>  misc_feature
<222>  (29)..(33)
<223>  n is a, c, g, or t

<400>  20
ggagttcaga cgtgtgctct tccgatctnn nnncatctct gtcctgccaa accatacc         58


<210>  21
<211>  59
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic


<220>
<221>  misc_feature
<222>  (29)..(34)
<223>  n is a, c, g, or t

<400>  21
ggagttcaga cgtgtgctct tccgatctnn nnnncatctc tgtcctgcca aaccatacc        59


<210>  22
<211>  60
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic


<220>
<221>  misc_feature
<222>  (29)..(35)
<223>  n is a, c, g, or t

<400>  22
ggagttcaga cgtgtgctct tccgatctnn nnnnncatct ctgtcctgcc aaaccatacc       60


<210>  23
<211>  149
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic


<220>
<221>  misc_feature
<222>  (84)..(104)
<223>  n is a, c, g, or t

<400>  23
ccaacgaaga agaaattaaa actactaacc cggtagcaac ggagtcctat ggacaagtgg       60

ccacaaacca ccagagtgcc caannnnnnn nnnnnnnnnn nnnngcacag gcgcagaccg      120

gttgggttca aaaccaagga atacttccg                                        149


<210>  24
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  24
cggactcaga ctatcagctc cc                                                22


<210>  25
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  25
gtattccttg gttttgaacc caaccg                                            26


<210>  26
<211>  83
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic


<220>
<221>  misc_feature
<222>  (42)..(43)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (45)..(46)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (48)..(49)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (51)..(52)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (54)..(55)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (57)..(58)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (60)..(61)
<223>  n is a, c, g, or t

<400>  26
gtattccttg gttttgaacc caaccggtct gcgcctgtgc mnnmnnmnnm nnmnnmnnmn       60

nttgggcact ctggtggttt gtg                                               83


