                         SEQUENCE LISTING

<110>  The Johns Hopkins University
 
<120>  LIPOCALIN-2 ASSAY FOR INTESTINAL ADAPTATION

<130>  P15751-02

<150>  63/008,354
<151>  2020-04-10

<160>  35    

<170>  PatentIn version 3.5

<210>  1
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  16S rRNA universal forward primer

<400>  1
actcctacgg gaggcagcag t                                                 21


<210>  2
<211>  18
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  16S rRNA universal reverse primer

<400>  2
attaccgcgg ctgctggc                                                     18


<210>  3
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Lcn-2 forward primer

<400>  3
aaggaacgtt tcacccgctt                                                   20


<210>  4
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Lcn-2 reverse primer

<400>  4
aatgcattgg tcggtgggga                                                   20


<210>  5
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  TNF-alpha forward primer

<400>  5
ttccgaattc actggagcct cgaa                                              24


<210>  6
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  TNF-alpha reverse primer

<400>  6
tgcacctcag ggaagaatct ggaa                                              24


<210>  7
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  IL-6 forward primer

<400>  7
ccaatttcca atgctctcct                                                   20


<210>  8
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  IL-6 reverse primer

<400>  8
accacagtga ggaatgtcca                                                   20


<210>  9
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  IL-22 forward primer

<400>  9
cgaccagaac atccagaaga a                                                 21


<210>  10
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  IL-22 reverse primer

<400>  10
gagacataaa cagcaggtcc a                                                 21


<210>  11
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Reg3g forward primer

<400>  11
gtaccctgtc aagagcctca                                                   20


<210>  12
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Reg3g reverse primer

<400>  12
gtaccctgtc aagagcctca                                                   20


<210>  13
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Reg3b forward primer

<400>  13
gctcaatagc gctgaggctt                                                   20


<210>  14
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Reg3b reverse primer

<400>  14
agaaagcacg gtctaaggca                                                   20


<210>  15
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Hprt forward primer

<400>  15
gctgacctgc tggattacat taa                                               23


<210>  16
<211>  28
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Hprt reverse primer

<400>  16
tgatcattac agtagctctt cagtctga                                          28


<210>  17
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Sucrase-isomaltase forward primer

<400>  17
atccaggttc gaaggagaag cact                                              24


<210>  18
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Sucrase-isomaltase reverse primer

<400>  18
ttcgcttgaa tgctgtgtgt tccg                                              24


<210>  19
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Tgr5 forward primer

<400>  19
cagctgccca aaggtgtcta                                                   20


<210>  20
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Tgr5 reverse primer

<400>  20
caagtccagg tcaatgctgc                                                   20


<210>  21
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Deltaproteobacteria forward primer

<400>  21
gctaacgcat taagtryccc g                                                 21


<210>  22
<211>  18
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Deltaproteobacteria reverse primer

<400>  22
gccatgcrgc acctgtct                                                     18


<210>  23
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Betaproteobacteria forward primer

<400>  23
aacgcgaaaa accttaccta cc                                                22


<210>  24
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Betaproteobacteria reverse primer

<400>  24
tgccctttcg tagcaactag tg                                                22


<210>  25
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Epsilonproteobacteria forward primer

<400>  25
taggcttgac attgatagaa tc                                                22


<210>  26
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Epsiolonproteobacteria reverse primer

<400>  26
cttacgaagg cagtctcctt a                                                 21


<210>  27
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Bacteriodetes forward primer

<400>  27
ggarcatgtg gtttaattcg atgat                                             25


<210>  28
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Bacteriodetes reverse primer

<400>  28
agctgacgac aaccatgcag                                                   20


<210>  29
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Firmicutes forward primer

<400>  29
ggagyatgtg gtttaattcg aagca                                             25


<210>  30
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Firmicutes reverse primer

<400>  30
agctgacgac aaccatgcac                                                   20


<210>  31
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Universal 16S rRNA forward primer

<400>  31
aaactcaaak gaattgacgg                                                   20


<210>  32
<211>  18
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Universal 16S rRNA reverse primer

<400>  32
ctcacrrcac gagctgac                                                     18


<210>  33
<211>  597
<212>  DNA
<213>  Homo sapiens

<400>  33
atgcccctag gtctcctgtg gctgggccta gccctgttgg gggctctgca tgcccaggcc       60

caggactcca cctcagacct gatcccagcc ccacctctga gcaaggtccc tctgcagcag      120

aacttccagg acaaccaatt ccaggggaag tggtatgtgg taggcctggc agggaatgca      180

attctcagag aagacaaaga cccgcaaaag atgtatgcca ccatctatga gctgaaagaa      240

gacaagagct acaatgtcac ctccgtcctg tttaggaaaa agaagtgtga ctactggatc      300

aggacttttg ttccaggttg ccagcccggc gagttcacgc tgggcaacat taagagttac      360

cctggattaa cgagttacct cgtccgagtg gtgagcacca actacaacca gcatgctatg      420

gtgttcttca agaaagtttc tcaaaacagg gagtacttca agatcaccct ctacgggaga      480

accaaggagc tgacttcgga actaaaggag aacttcatcc gcttctccaa atctctgggc      540

ctccctgaaa accacatcgt cttccctgtc ccaatcgacc agtgtatcga cggctga         597


<210>  34
<211>  198
<212>  PRT
<213>  Homo sapiens

<400>  34

Met Pro Leu Gly Leu Leu Trp Leu Gly Leu Ala Leu Leu Gly Ala Leu 
1               5                   10                  15      


His Ala Gln Ala Gln Asp Ser Thr Ser Asp Leu Ile Pro Ala Pro Pro 
            20                  25                  30          


Leu Ser Lys Val Pro Leu Gln Gln Asn Phe Gln Asp Asn Gln Phe Gln 
        35                  40                  45              


Gly Lys Trp Tyr Val Val Gly Leu Ala Gly Asn Ala Ile Leu Arg Glu 
    50                  55                  60                  


Asp Lys Asp Pro Gln Lys Met Tyr Ala Thr Ile Tyr Glu Leu Lys Glu 
65                  70                  75                  80  


Asp Lys Ser Tyr Asn Val Thr Ser Val Leu Phe Arg Lys Lys Lys Cys 
                85                  90                  95      


Asp Tyr Trp Ile Arg Thr Phe Val Pro Gly Cys Gln Pro Gly Glu Phe 
            100                 105                 110         


Thr Leu Gly Asn Ile Lys Ser Tyr Pro Gly Leu Thr Ser Tyr Leu Val 
        115                 120                 125             


Arg Val Val Ser Thr Asn Tyr Asn Gln His Ala Met Val Phe Phe Lys 
    130                 135                 140                 


Lys Val Ser Gln Asn Arg Glu Tyr Phe Lys Ile Thr Leu Tyr Gly Arg 
145                 150                 155                 160 


Thr Lys Glu Leu Thr Ser Glu Leu Lys Glu Asn Phe Ile Arg Phe Ser 
                165                 170                 175     


Lys Ser Leu Gly Leu Pro Glu Asn His Ile Val Phe Pro Val Pro Ile 
            180                 185                 190         


Asp Gln Cys Ile Asp Gly 
        195             


<210>  35
<211>  820
<212>  DNA
<213>  Homo sapiens

<400>  35
actcgccacc tcctcttcca cccctgccag gcccagcagc caccacagcg cctgcttcct       60

cggccctgaa atcatgcccc taggtctcct gtggctgggc ctagccctgt tgggggctct      120

gcatgcccag gcccaggact ccacctcaga cctgatccca gccccacctc tgagcaaggt      180

ccctctgcag cagaacttcc aggacaacca attccagggg aagtggtatg tggtaggcct      240

ggcagggaat gcaattctca gagaagacaa agacccgcaa aagatgtatg ccaccatcta      300

tgagctgaaa gaagacaaga gctacaatgt cacctccgtc ctgtttagga aaaagaagtg      360

tgactactgg atcaggactt ttgttccagg ttgccagccc ggcgagttca cgctgggcaa      420

cattaagagt taccctggat taacgagtta cctcgtccga gtggtgagca ccaactacaa      480

ccagcatgct atggtgttct tcaagaaagt ttctcaaaac agggagtact tcaagatcac      540

cctctacggg agaaccaagg agctgacttc ggaactaaag gagaacttca tccgcttctc      600

caaatctctg ggcctccctg aaaaccacat cgtcttccct gtcccaatcg accagtgtat      660

cgacggctga gtgcacaggt gccgccagct gccgcaccag cccgaacacc attgagggag      720

ctgggagacc ctccccacag tgccacccat gcagctgctc cccaggccac cccgctgatg      780

gagccccacc ttgtctgcta aataaacatg tgccctcagg                            820


