                         SEQUENCE LISTING

<110>  Technische Universitt Dortmund
 
<120>  MODIFIED DNA-ENCODED CHEMICAL LIBRARY AND METHODS RELATED THERETO

<130>  P80474

<150>  EP20166145.1
<151>  2020-03-27

<160>  38    

<170>  PatentIn version 3.5

<210>  1
<211>  10
<212>  DNA
<213>  Artificial  sequence

<220>
<223>  5' - 3' sequence of ATC

<400>  1
ttactaccta                                                              10


<210>  2
<211>  10
<212>  DNA
<213>  Artificial sequence

<220>
<223>  5' - 3' sequence of A*TC


<220>
<221>  misc_feature
<222>  (3)..(3)
<223>  n is 7-deaza-2'-deoxyadenosine

<220>
<221>  misc_feature
<222>  (6)..(6)
<223>  n is 7-deaza-2'-deoxyadenosine

<220>
<221>  misc_feature
<222>  (9)..(9)
<223>  n is 7-deaza-2'-deoxyadenosine

<400>  2
ttnctnccnt                                                              10


<210>  3
<211>  10
<212>  DNA
<213>  Artificial sequence

<220>
<223>  5' - 3' sequence of A**TC


<220>
<221>  misc_feature
<222>  (3)..(3)
<223>  n is 7-deaza-8-aza-2'deoxyadenosine

<220>
<221>  misc_feature
<222>  (6)..(6)
<223>  n is 7-deaza-8-aza-2'deoxyadenosine

<220>
<221>  misc_feature
<222>  (9)..(9)
<223>  n is 7-deaza-8-aza-2'deoxyadenosine

<400>  3
ttnctnccnt                                                              10


<210>  4
<211>  38
<212>  DNA
<213>  Artificial sequcence

<220>
<223>  Generic sequence of the oligonucleotide I


<220>
<221>  misc_feature
<222>  (13)..(13)
<223>  n is C9 spacer

<400>  4
caaatccgtt canaggtcgg tgtgaacgga tttgagtc                               38


<210>  5
<211>  16
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Generic sequence of the oligonucleotide II


<220>
<221>  misc_feature
<222>  (2)..(2)
<223>  n is dU with organic moiety attached

<220>
<221>  misc_feature
<222>  (5)..(12)
<223>  each n is independently of each other C, T, 7-deaza adenosine, 
       7-deaza-8-aza adenosine or 7-deaza-8-aza guanosine

<220>
<221>  misc_feature
<222>  (13)..(13)
<223>  n is 7-deaza adenosine or 7-deaza-8-aza adenosine

<400>  5
cnctnnnnnn nnncct                                                       16


<210>  6
<211>  24
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Generic sequence of the oligonucleotide II'


<220>
<221>  misc_feature
<222>  (9)..(9)
<223>  n is inosine

<220>
<221>  misc_feature
<222>  (10)..(10)
<223>  n is an abasic site

<220>
<221>  misc_feature
<222>  (11)..(11)
<223>  n is an abasic site

<220>
<221>  misc_feature
<222>  (12)..(12)
<223>  n is inosine

<220>
<221>  misc_feature
<222>  (13)..(13)
<223>  n is an abasic site

<220>
<221>  misc_feature
<222>  (14)..(14)
<223>  n is an abasic site

<220>
<221>  misc_feature
<222>  (15)..(15)
<223>  n is inosine

<220>
<221>  misc_feature
<222>  (16)..(16)
<223>  n is inosine

<400>  6
taggaggtnn nnnnnnagag gact                                              24


<210>  7
<211>  35
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Generic sequence of the oligonucleotide III

<400>  7
cctagacttg actgacctca actacatggt ctaca                                  35


<210>  8
<211>  31
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Generic sequence of the olionucleotide III`

<400>  8
tgtagaccat gtagttgagg tcagtcaagt c                                      31


<210>  9
<211>  21
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Forward primer

<400>  9
aggtcggtgt gaacggattt g                                                 21


<210>  10
<211>  23
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Reverse primer

<400>  10
tgacctcaac tacatggtct aca                                               23


<210>  11
<211>  23
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Complementary sequence to reverse primer

<400>  11
tgtagaccat gtagttgagg tca                                               23


<210>  12
<211>  16
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Sequence of exemplary oligonucleotide II (code A)


<220>
<221>  misc_feature
<222>  (2)..(2)
<223>  n is T

<220>
<221>  misc_feature
<222>  (9)..(9)
<223>  n is 7-deaza adenosine

<220>
<221>  misc_feature
<222>  (10)..(10)
<223>  n is 7-deaza adenosine

<220>
<221>  misc_feature
<222>  (13)..(13)
<223>  n is 7-deaza adenosine

<400>  12
cnctctttnn ctncct                                                       16


<210>  13
<211>  16
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Sequence of exemplary oligonucleotide II (code B)


<220>
<221>  misc_feature
<222>  (2)..(2)
<223>  n is T

<220>
<221>  misc_feature
<222>  (9)..(9)
<223>  n is 7-deaza-8-aza adenosine

<220>
<221>  misc_feature
<222>  (10)..(10)
<223>  n is 7-deaza-8-aza adenosine

<220>
<221>  misc_feature
<222>  (13)..(13)
<223>  n is 7-deaza-8-aza adenosine

<400>  13
cnctctttnn ctncct                                                       16


<210>  14
<211>  16
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Sequence of exemplary oligonucleotide II (code C)


<220>
<221>  misc_feature
<222>  (2)..(2)
<223>  n is T

<220>
<221>  misc_feature
<222>  (9)..(9)
<223>  n is 7-deaza-8-aza guanosine

<220>
<221>  misc_feature
<222>  (10)..(10)
<223>  n is 7-deaza-8-aza guanosine

<220>
<221>  misc_feature
<222>  (13)..(13)
<223>  n is 7-deaza-8-aza adenosine

<400>  14
cnctctttnn ctncct                                                       16


<210>  15
<211>  54
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Forward primer

<400>  15
tcgtcggcag cgtcagatgt gtataagaga cagaggtcgg tgtgaacgga tttg             54


<210>  16
<211>  57
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Reverse primer

<400>  16
gtctcgtggg ctcggagatg tgtataagag acagtgtaga ccatgtagtt gaggtca          57


<210>  17
<211>  24
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Sequence of the oligonucleotide II`


<220>
<221>  misc_feature
<222>  (9)..(9)
<223>  n is inosine

<220>
<221>  misc_feature
<222>  (10)..(10)
<223>  n is an abasic site

<220>
<221>  misc_feature
<222>  (11)..(11)
<223>  n is an abasic site

<220>
<221>  misc_feature
<222>  (12)..(12)
<223>  n is inosine

<220>
<221>  misc_feature
<222>  (13)..(13)
<223>  n is inosine

<220>
<221>  misc_feature
<222>  (14)..(14)
<223>  n is an abasic site

<220>
<221>  misc_feature
<222>  (15)..(15)
<223>  n is an abasic site

<220>
<221>  misc_feature
<222>  (16)..(16)
<223>  n is inosine

<400>  17
atacaggtnn nnnnnnagag gact                                              24


<210>  18
<211>  12
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Sequence of the oligonucleotide III


<220>
<221>  misc_feature
<222>  (1)..(8)
<223>  each n is independently of each other C, T, A or G

<400>  18
gtatcaagca gg                                                           12


<210>  19
<211>  12
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Sequence of the oligonucleotide III`


<220>
<221>  misc_feature
<222>  (5)..(12)
<223>  each n is independently of each other C, T, A or G

<400>  19
taggcctgct tg                                                           12


<210>  20
<211>  35
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Sequence of the oligonucleotide IV


<220>
<221>  misc_feature
<222>  (5)..(12)
<223>  each n is independently of each other C, T, A or G

<400>  20
cctactctcg tatgacctca actacatggt ctaca                                  35


<210>  21
<211>  31
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Sequence of the oligonucleotide IV`


<220>
<221>  misc_feature
<222>  (1)..(8)
<223>  each n is independently of each other C, T, A or G

<400>  21
tgtagaccat gtagttgagg tcatacgaga g                                      31


<210>  22
<211>  23
<212>  DNA
<213>  Artificial

<220>
<223>  Forward primer

<400>  22
aggtcggtgt gaacggattt gag                                               23


<210>  23
<211>  22
<212>  DNA
<213>  Artificial

<220>
<223>  Reverse Primer

<400>  23
gtagaccatg tagttgaggt ca                                                22


<210>  24
<211>  10
<212>  DNA
<213>  Artificial

<220>
<223>  5' - 3' sequence of ATGC

<400>  24
gtcatgatct                                                              10


<210>  25
<211>  10
<212>  DNA
<213>  Artificial

<220>
<223>  5' - 3' sequence of TG*C


<220>
<221>  misc_feature
<222>  (3)..(3)
<223>  n is 7-deaza-8-aza-2'-deoxyguanosine

<220>
<221>  misc_feature
<222>  (6)..(6)
<223>  n is 7-deaza-8-aza-2'-deoxyguanosine

<220>
<221>  misc_feature
<222>  (9)..(9)
<223>  n is 7-deaza-8-aza-2'-deoxyguanosine

<400>  25
ttnctnccnt                                                              10


<210>  26
<211>  10
<212>  DNA
<213>  Artificial

<220>
<223>  5' - 3' sequence of A*TG*C


<220>
<221>  misc_feature
<222>  (1)..(1)
<223>  n is 7-deaza-8-aza-2'-deoxyguanosine

<220>
<221>  misc_feature
<222>  (4)..(4)
<223>  n is 7-deaza-2'-deoxyadenosine

<220>
<221>  misc_feature
<222>  (6)..(6)
<223>  n is 7-deaza-8-aza-2'-deoxyguanosine

<220>
<221>  misc_feature
<222>  (7)..(7)
<223>  n is 7-deaza-2'-deoxyadenosine

<400>  26
ntcntnntct                                                              10


<210>  27
<211>  16
<212>  DNA
<213>  Artificial

<220>
<223>  5' - 3' sequence of A*TC


<220>
<221>  misc_feature
<222>  (9)..(10)
<223>  n is 7-deaza-2'-deoxyadenosine

<220>
<221>  misc_feature
<222>  (13)..(13)
<223>  n is 7-deaza-2'-deoxyadenosine

<400>  27
ctctctttnn ctncct                                                       16


<210>  28
<211>  16
<212>  DNA
<213>  Artificial

<220>
<223>  5' - 3' sequence of A*TG*C


<220>
<221>  misc_feature
<222>  (6)..(6)
<223>  n is 7-deaza-8-aza-2'-deoxyguanosine

<220>
<221>  misc_feature
<222>  (7)..(7)
<223>  n is 7-deaza-2'-deoxyadenosine

<220>
<221>  misc_feature
<222>  (11)..(11)
<223>  n is 7-deaza-8-aza-2'-deoxyguanosine

<220>
<221>  misc_feature
<222>  (13)..(13)
<223>  n is 7-deaza-8-aza-2'-deoxyadenosine

<400>  28
ctctcnnttc ncncct                                                       16


<210>  29
<211>  15
<212>  DNA
<213>  Artificial

<220>
<223>  template sequence


<220>
<221>  misc_feature
<222>  (9)..(10)
<223>  n is 7-deaza-8-aza-2'-deoxyadenosine

<220>
<221>  misc_feature
<222>  (12)..(12)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (13)..(13)
<223>  n is 7-deaza-8-aza-2'-deoxyadenosine

<400>  29
ctctctttnc tncct                                                        15


<210>  30
<211>  16
<212>  DNA
<213>  Artificial

<220>
<223>  Code sequence IIa


<220>
<221>  misc_feature
<222>  (7)..(7)
<223>  n is 7-deaza-2'-deoxyadenosine

<220>
<221>  misc_feature
<222>  (11)..(11)
<223>  n is 7-deaza-2'-deoxyadenosine

<220>
<221>  misc_feature
<222>  (13)..(13)
<223>  n is 7-deaza-2'-deoxyadenosine

<400>  30
ctctctntct ntncct                                                       16


<210>  31
<211>  16
<212>  DNA
<213>  Artificial

<220>
<223>  Code sequence IIb


<220>
<221>  misc_feature
<222>  (7)..(8)
<223>  n is 7-deaza-2'-deoxyadenosine

<220>
<221>  misc_feature
<222>  (13)..(13)
<223>  n is 7-deaza-2'-deoxyadenosine

<400>  31
ctcttcnntt ccncct                                                       16


<210>  32
<211>  16
<212>  DNA
<213>  Artificial

<220>
<223>  Code sequence IIc


<220>
<221>  misc_feature
<222>  (5)..(5)
<223>  n is 7-deaza-2'-deoxyadenosine

<220>
<221>  misc_feature
<222>  (7)..(7)
<223>  n is 7-deaza-2'-deoxyadenosine

<220>
<221>  misc_feature
<222>  (12)..(13)
<223>  n is 7-deaza-2'-deoxyadenosine

<400>  32
ctctncnctt tnncct                                                       16


<210>  33
<211>  16
<212>  DNA
<213>  Artificial

<220>
<223>  Code sequence IId


<220>
<221>  misc_feature
<222>  (6)..(7)
<223>  n is 7-deaza-2'-deoxyguanosine

<220>
<221>  misc_feature
<222>  (10)..(10)
<223>  n is 7-deaza-2'-deoxyguanosine

<220>
<221>  misc_feature
<222>  (12)..(13)
<223>  n is 7-deaza-2'-deoxyguanosine

<400>  33
ctctcnnttn cnncct                                                       16


<210>  34
<211>  16
<212>  DNA
<213>  Artificial

<220>
<223>  Code sequence IIe


<220>
<221>  misc_feature
<222>  (5)..(5)
<223>  n is 7-deaza-2'-deoxyadenosine

<220>
<221>  misc_feature
<222>  (9)..(9)
<223>  n is 7-deaza-2'-deoxyadenosine

<220>
<221>  misc_feature
<222>  (13)..(13)
<223>  n is 7-deaza-2'-deoxyadenosine

<400>  34
ctctncctnc ttncct                                                       16


<210>  35
<211>  16
<212>  DNA
<213>  Artificial

<220>
<223>  Code sequence IIf


<220>
<221>  misc_feature
<222>  (7)..(7)
<223>  n is 7-deaza-8-aza-2'-deoxyguanosine

<220>
<221>  misc_feature
<222>  (11)..(11)
<223>  n is 7-deaza-8-aza-2'-deoxyguanosine

<220>
<221>  misc_feature
<222>  (13)..(13)
<223>  n is 7-deaza-2'-deoxyadenosine

<400>  35
ctctctntct ntncct                                                       16


<210>  36
<211>  16
<212>  DNA
<213>  Artificial

<220>
<223>  Code sequence IIg


<220>
<221>  misc_feature
<222>  (6)..(6)
<223>  n is 7-deaza-8-aza-2'-deoxyguanosine

<220>
<221>  misc_feature
<222>  (7)..(7)
<223>  n is 7-deaza-2'-deoxyadenosine

<220>
<221>  misc_feature
<222>  (11)..(11)
<223>  n is 7-deaza-8-aza-2'-deoxyguanosine

<220>
<221>  misc_feature
<222>  (13)..(13)
<223>  n is 7-deaza-2'-deoxyadenosine

<400>  36
ctctcnnttc ncncct                                                       16


<210>  37
<211>  16
<212>  DNA
<213>  Artificial

<220>
<223>  Code sequence IIh


<220>
<221>  misc_feature
<222>  (6)..(6)
<223>  n is 7-deaza-2'-deoxyadenosine

<220>
<221>  misc_feature
<222>  (7)..(7)
<223>  n is 7-deaza-8-aza-2'-deoxyguanosine

<220>
<221>  misc_feature
<222>  (8)..(8)
<223>  n is 7-deaza-2'-deoxyadenosine

<220>
<221>  misc_feature
<222>  (13)..(13)
<223>  n is 7-deaza-2'-deoxyadenosine

<400>  37
ctctcnnntt tcncct                                                       16


<210>  38
<211>  16
<212>  DNA
<213>  Artificial

<220>
<223>  Code sequence IIi


<220>
<221>  misc_feature
<222>  (6)..(6)
<223>  n is 7-deaza-8-aza-2'-deoxyguanosine

<220>
<221>  misc_feature
<222>  (7)..(7)
<223>  n is 7-deaza-2'-deoxyadenosine

<220>
<221>  misc_feature
<222>  (8)..(8)
<223>  n is 7-deaza-8-aza-2'-deoxyguanosine

<220>
<221>  misc_feature
<222>  (13)..(13)
<223>  n is 7-deaza-2'-deoxyadenosine

<400>  38
ctctcnnncc tcncct                                                       16


