                         SEQUENCE LISTING

<110>  INDIAN INSTITUTE OF TECHNOLOGY DELHI
 
<120>  PRIMER SETS, BIOMARKERS, KIT AND APPLICATIONS THEREOF

<130>  PD037286IN-SC

<160>  27    

<170>  PatentIn version 3.5

<210>  1
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  depicts the nucleic acid sequence of Biomarker 1

<400>  1
tctgggacca atggtactaa gagg                                              24


<210>  2
<211>  18
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  depicts the nucleic acid sequence of Biomarker 2

<400>  2
cacaaaaaca acaaaagt                                                     18


<210>  3
<211>  18
<212>  DNA
<213>  Artificial Sequence

<220>
<223>   depicts the nucleic acid sequence of Biomarker 3

<400>  3
ggtgattctt cttcaggt                                                     18


<210>  4
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  depicts the nucleic acid sequence of Biomarker 4

<400>  4
cagactaatt ctcctcggcg ggca                                              24


<210>  5
<211>  63
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  depicts the nucleic acid sequence of biomarker 5

<400>  5
ttggtcaaca agacggcagt gaggacaatc agacaactac tattcaaaca attgttgagg       60

ttc                                                                     63


<210>  6
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  depicts forward primer sequence of the primer set APAP 1

<400>  6
atacatgtct ctgggaccaa tgg                                               23


<210>  7
<211>  29
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  depicts reverse primer sequence of the primer set APAP 1

<400>  7
acttttgttg tttttgtggt aataaacac                                         29


<210>  8
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  depicts forward primer sequence of the primer set APAP 2

<400>  8
gactcctggt gattcttctt cagg                                              24


<210>  9
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  depicts reverse primer sequence of the primer set APAP 2

<400>  9
acagtgaagg atttcaacgt acac                                              24


<210>  10
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  depicts forward primer sequence of the primer set APAP 3

<400>  10
gactcagact aattctcctc gg                                                22


<210>  11
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  depicts reverse primer sequence of the primer set APAP 3

<400>  11
gacactggta gaatttctgt gg                                                22


<210>  12
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  depicts forward primer sequence of the primer set APAP 4

<400>  12
tcagactaat tctcctcggc                                                   20


<210>  13
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  depicts reverse primer sequence of the primer set APAP 4

<400>  13
atttgtgggt atggcaatag ag                                                22


<210>  14
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>   depicts forward primer sequence of the primer set APAP 5

<400>  14
cacttctgct gctcttcaac                                                   20


<210>  15
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  depicts reverse primer sequence of the primer set APAP 5

<400>  15
gcttcttcca caatgtctgc                                                   20


<210>  16
<211>  19
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  depicts forward primer sequence of the primer set APAP 6

<400>  16
cttctgctgc tcttcaacc                                                    19


<210>  17
<211>  19
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  depicts reverse primer sequence of the primer set APAP 6

<400>  17
tctgattgtc ctcactgcc                                                    19


<210>  18
<211>  33
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  depicts the probe for the oligonucleotide primer pairs APAP 3 and
       APAP 4

<400>  18
agtcaatcca tcattgccta cactatgtca ctt                                    33


<210>  19
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  depicts the probe for the oligonucleotide primer pair APAP 5

<400>  19
acggcagtga ggacaatcag acaactacta                                        30


<210>  20
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  depicts the probe for the oligonucleotide primer pair APAP 1

<400>  20
gaagtctaac ataataagag gctgg                                             25


<210>  21
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  depicts the probe for the oligonucleotide primer pair APAP 2

<400>  21
agatgctgta gactgtgcac ttgac                                             25


<210>  22
<211>  252
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  depicts the nucleic acid sequence of the amplicon as obtained by 
       performing PCR using the oligonucleotide primer pair APAP 1

<400>  22
atacatgtct ctgggaccaa tggtactaag aggtttgata accctgtcct accatttaat       60

gatggtgttt attttgcttc cactgagaag tctaacataa taagaggctg gatttttggt      120

actactttag attcgaagac ccagtcccta cttattgtta ataacgctac taatgttgtt      180

attaaagtct gtgaatttca attttgtaat gatccatttt tgggtgttta ttaccacaaa      240

aacaacaaaa gt                                                          252


<210>  23
<211>  177
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  depicts the nucleic acid sequence of the amplicon as obtained by 
       performing PCR using the oligonucleotide primer pair APAP 2

<400>  23
gactcctggt gattcttctt caggttggac agctggtgct gcagcttatt atgtgggtta       60

tcttcaacct aggacttttc tattaaaata taatgaaaat ggaaccatta cagatgctgt      120

agactgtgca cttgaccctc tctcagaaac aaagtgtacg ttgaaatcct tcactgt         177


<210>  24
<211>  165
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  depicts the nucleic acid sequence of the amplicon as obtained by 
       performing PCR using the oligonucleotide primer pair APAP 3

<400>  24
gactcagact aattctcctc ggcgggcacg tagtgtagct agtcaatcca tcattgccta       60

cactatgtca cttggtgcag aaaattcagt tgcttactct aataactcta ttgccatacc      120

cacaaatttt actattagtg ttaccacaga aattctacca gtgtc                      165


<210>  25
<211>  124
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  depicts the nucleic acid sequence of the amplicon as obtained by 
       performing PCR using the oligonucleotide primer pair APAP 4

<400>  25
tcagactaat tctcctcggc gggcacgtag tgtagctagt caatccatca ttgcctacac       60

tatgtcactt ggtgcagaaa attcagttgc ttactctaat aactctattg ccatacccac      120

aaat                                                                   124


<210>  26
<211>  255
<212>  DNA
<213>  Artificial Sequence

<220>
<223>   depicts the nucleic acid sequence of the amplicon as obtained by
       performing PCR using the oligonucleotide primer pair APAP 5

<400>  26
cacttctgct gctcttcaac ctgaagaaga gcaagaagaa gattggttag atgatgatag       60

tcaacaaact gttggtcaac aagacggcag tgaggacaat cagacaacta ctattcaaac      120

aattgttgag gttcaacctc aattagagat ggaacttaca ccagttgttc agactattga      180

agtgaatagt tttagtggtt atttaaaact tactgacaat gtatacatta aaaatgcaga      240

cattgtggaa gaagc                                                       255


<210>  27
<211>  102
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  depicts the nucleic acid sequence of the amplicon as obtained by 
       performing PCR using the oligonucleotide primer pair APAP 6

<400>  27
cttctgctgc tcttcaacct gaagaagagc aagaagaaga ttggttagat gatgatagtc       60

aacaaactgt tggtcaacaa gacggcagtg aggacaatca ga                         102


