                         SEQUENCE LISTING

<110>  UNIVERSITY OF NOTRE DAME DU LAC
       BAKER, Brian
       RILEY, Tim
 
<120>  PREDICTING AFFINITY USING STRUCTURAL AND PHYSICAL MODELING

<130>  092012-9119-WO01

<150>  US 62/777,670
<151>  2018-12-10

<160>  62    

<170>  PatentIn version 3.5

<210>  1
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  1

Asn Leu Val Pro Ala Val Ala Thr Val 
1               5                   


<210>  2
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  2

Leu Ala Gly Ile Gly Ile Leu Thr Val 
1               5                   


<210>  3
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  3

Ala Ala Gly Ile Gly Ile Leu Thr Val 
1               5                   


<210>  4
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  4

Ala Leu Gly Ile Gly Ile Leu Thr Val 
1               5                   


<210>  5
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  5

Ala Leu Trp Gly Phe Phe Pro Val Leu 
1               5                   


<210>  6
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  6

Ala Leu Trp Gly Phe Val Pro Val Leu 
1               5                   


<210>  7
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  7

Ala Leu Trp Gly Val Phe Pro Val Leu 
1               5                   


<210>  8
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  8

Cys Ile Asn Gly Met Cys Trp Thr Val 
1               5                   


<210>  9
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  9

Cys Ile Asn Gly Val Cys Trp Thr Val 
1               5                   


<210>  10
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  10

Cys Ile Asn Gly Val Val Trp Thr Val 
1               5                   


<210>  11
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  11

Cys Ile Ser Gly Val Cys Trp Thr Val 
1               5                   


<210>  12
<211>  10
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  12

Glu Ala Ala Gly Ile Gly Ile Leu Thr Val 
1               5                   10  


<210>  13
<211>  10
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  13

Glu Leu Ala Gly Ile Gly Ile Leu Thr Val 
1               5                   10  


<210>  14
<211>  10
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  14

Ala Leu Ala Gly Ile Gly Ile Leu Thr Val 
1               5                   10  


<210>  15
<211>  10
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  15

Glu Leu Ala Gly Trp Gly Ile Leu Thr Val 
1               5                   10  


<210>  16
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  16

Gly Ile Leu Glu Phe Val Phe Thr Leu 
1               5                   


<210>  17
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  17

Gly Ile Leu Gly Phe Val Phe Thr Leu 
1               5                   


<210>  18
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  18

Gly Ile Leu Gly Leu Val Phe Thr Leu 
1               5                   


<210>  19
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  19

Gly Ile Trp Gly Phe Val Phe Thr Leu 
1               5                   


<210>  20
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  20

Gly Leu Cys Pro Leu Val Ala Met Leu 
1               5                   


<210>  21
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  21

Gly Leu Cys Thr Leu Val Ala Met Leu 
1               5                   


<210>  22
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  22

Ile Leu Lys Glu Pro Val His Gly Val 
1               5                   


<210>  23
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  23

Phe Leu Lys Glu Pro Val His Gly Val 
1               5                   


<210>  24
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  24

Tyr Leu Lys Glu Pro Val His Gly Val 
1               5                   


<210>  25
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  25

Ile Leu Ser Ala Leu Val Gly Ile Leu 
1               5                   


<210>  26
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  26

Ile Leu Ser Ala Leu Val Gly Ile Val 
1               5                   


<210>  27
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  27

Ile Met Asp Gln Val Pro Phe Ser Val 
1               5                   


<210>  28
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  28

Ile Thr Asp Gln Val Pro Phe Ser Val 
1               5                   


<210>  29
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  29

Lys Val Ala Glu Ile Val His Phe Leu 
1               5                   


<210>  30
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  30

Lys Val Ala Glu Leu Val His Phe Leu 
1               5                   


<210>  31
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  31

Lys Val Ala Glu Leu Val Trp Phe Leu 
1               5                   


<210>  32
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  32

Leu Gly Tyr Gly Phe Val Asn Tyr Ile 
1               5                   


<210>  33
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  33

Leu Leu Tyr Gly Phe Val Asn Tyr Ile 
1               5                   


<210>  34
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  34

Leu Leu Tyr Gly Phe Val Asn Tyr Val 
1               5                   


<210>  35
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  35

Leu Leu Phe Gly Lys Pro Val Tyr Val 
1               5                   


<210>  36
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  36

Leu Leu Phe Gly Tyr Pro Val Tyr Val 
1               5                   


<210>  37
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  37

Asn Leu Val Pro Met Cys Ala Thr Val 
1               5                   


<210>  38
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  38

Asn Leu Val Pro Met Gly Ala Thr Val 
1               5                   


<210>  39
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  39

Asn Leu Val Pro Met Val Ala Ala Val 
1               5                   


<210>  40
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  40

Asn Leu Val Pro Met Val Ala Thr Val 
1               5                   


<210>  41
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  41

Asn Leu Val Pro Met Val Ala Val Val 
1               5                   


<210>  42
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  42

Asn Leu Val Pro Met Val His Thr Val 
1               5                   


<210>  43
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  43

Asn Leu Val Pro Gln Val Ala Thr Val 
1               5                   


<210>  44
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  44

Asn Leu Val Pro Ser Val Ala Thr Val 
1               5                   


<210>  45
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  45

Asn Leu Val Pro Thr Val Ala Thr Val 
1               5                   


<210>  46
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  46

Asn Leu Val Pro Val Val Ala Thr Val 
1               5                   


<210>  47
<211>  10
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  47

Arg Leu Tyr Gln Asn Pro Thr Thr Tyr Ile 
1               5                   10  


<210>  48
<211>  10
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  48

Lys Leu Tyr Gln Asn Pro Thr Thr Tyr Ile 
1               5                   10  


<210>  49
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  49

Ser Leu Ala Asn Thr Val Ala Thr Leu 
1               5                   


<210>  50
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  SLFNTVATL

<400>  50

Ser Leu Phe Asn Thr Val Ala Thr Leu 
1               5                   


<210>  51
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  51

Ser Leu Leu Met Trp Ile Thr Gln Ala 
1               5                   


<210>  52
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  52

Ser Leu Leu Met Trp Ile Thr Gln Cys 
1               5                   


<210>  53
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  53

Ser Leu Leu Met Trp Ile Thr Gln Leu 
1               5                   


<210>  54
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  54

Ser Leu Leu Met Trp Ile Thr Gln Ser 
1               5                   


<210>  55
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  55

Ser Leu Tyr Leu Thr Val Ala Thr Leu 
1               5                   


<210>  56
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  56

Ser Leu Tyr Asn Thr Ile Ala Thr Leu 
1               5                   


<210>  57
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  57

Ser Leu Tyr Asn Thr Val Ala Thr Leu 
1               5                   


<210>  58
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  58

Ser Leu Tyr Asn Val Val Ala Thr Leu 
1               5                   


<210>  59
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  59

Val Leu His Asp Asp Leu Leu Glu Ala 
1               5                   


<210>  60
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  60

Val Leu Arg Asp Asp Leu Leu Glu Ala 
1               5                   


<210>  61
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  61

Tyr Met Phe Pro Asn Ala Pro Tyr Leu 
1               5                   


<210>  62
<211>  9
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetic

<400>  62

Arg Met Phe Pro Asn Ala Pro Tyr Leu 
1               5                   


