                               SEQUENCE LISTING

<110> CORTEXYME, INC.
 
<120> METHODS FOR DETECTION OF MICROBIAL NUCLEIC ACIDS IN BODY
      FLUIDS

<130> 098460-001310PC-1157117

<140> PCT/US2019/053586
<141> 2019-09-27

<150> 62/737,749
<151> 2018-09-27

<160> 24    

<170> PatentIn version 3.5

<210> 1
<211> 651
<212> DNA
<213> Porphyromonas gingivalis

<400> 1
atgaaaaaaa tcattttctc cgcactctgt gcattgccat tgattgtgtc tctaacttct       60

tgtgggaaga agaaagacga gccgaaccaa ccctccacac ccgaagcagt aaccaaaacc      120

gtaactatcg atgcttcgaa atacgaaacg tggcagtatt tctctttttc caaaggtgaa      180

gtcgtaaatg ttaccgacta taagaacgat ttgaactggg acatggctct tcaccgctat      240

gacgttcgtc tcaattgtgg cgaaagtggt aagggaaaag gtggtgccgt attctccggc      300

aagacagaaa tggatcaggc tactaccgtt ccgacagacg gatatactgt agatgttctc      360

ggccgtatta cagtcaagta cgaaatggga cctgatggtc atcagatgga atatgaagaa      420

cagggcttca gcgaagtgat taccggcaag aagaacgcac agggatttgc ttcaggtggt      480

tggctggaat tctctcacgg tcctgccggt cccacttaca agctgagcaa aagagtcttc      540

ttcgttcgtg gtgctgatgg taatattgcc aaagtgcagt tcactgacta tcaggatgca      600

gaactcaaaa aaggagtcat cactttcact tatacatacc ccgttaaata a               651


<210> 2
<211> 20
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      primer

<400> 2
ggtgaagtcg taaatgttac                                                   20


<210> 3
<211> 20
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      primer

<400> 3
ttgactgtaa tacggccgag                                                   20


<210> 4
<211> 20
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      primer

<400> 4
gaacgatttg aactgggaca                                                   20


<210> 5
<211> 20
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      primer

<400> 5
aacggtagta gcctgatcca                                                   20


<210> 6
<211> 15
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      probe

<400> 6
gccggagaat acggc                                                        15


<210> 7
<211> 250
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      polynucleotide

<400> 7
aaacgtggca gtatttctct ttttccaaag gtgaagtcgt aaatgttacc gactataaga       60

acgatttgaa ctgggacatg gctcttcacc gctatgacgt tcgtctcaat tgtggcgaaa      120

gtggtaaggg aaaaggtggt gccgtattct ccggcaagac agaaatggat caggctacta      180

ccgttccgac agacggatat actgtagatg ttctcggccg tattacagtc aagtacgaaa      240

tgggacctga                                                             250


<210> 8
<211> 19
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      primer

<400> 8
acgagtattg cattgaatg                                                    19


<210> 9
<211> 21
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      primer

<400> 9
accctttaaa cccaataaat c                                                 21


<210> 10
<211> 19
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      primer

<400> 10
acgagtattg cattgaatg                                                    19


<210> 11
<211> 21
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      primer

<400> 11
accctttaaa cccaataaat c                                                 21


<210> 12
<211> 20
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      primer

<400> 12
aggatgaacg ctagcgatag                                                   20


<210> 13
<211> 21
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      primer

<400> 13
gtgagccgtt acctcaccaa c                                                 21


<210> 14
<211> 20
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      primer

<400> 14
cgaggggcag catgawctta                                                   20


<210> 15
<211> 20
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      primer

<400> 15
ttgtaatatc atgcaataat                                                   20


<210> 16
<211> 27
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      probe

<400> 16
gcgtaacgcg tatgcaactt gccttac                                           27


<210> 17
<211> 300
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      polynucleotide

<400> 17
gagtttgatt ctggctcagg atgaacgcta gcgataggct taacacatgc aagtcgaggg       60

gcagcatgaa cttagcttgc taagtttgat ggcgaccggc gcacgggtgc gtaacgcgta      120

tgcaacttgc cttacagagg gggataaccc gttgaaagac ggactaatac cgcatacact      180

tgtattattg catgatatta caaggaaata tttatagctg taagataggc atgcgtccca      240

ttagctggtt ggtgaggtaa cggctcacca aggcaacgat gggtagggga actgagaggt      300


<210> 18
<211> 20
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      primer

<400> 18
ctgcactgta atacaagtcg                                                   20


<210> 19
<211> 20
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      primer

<400> 19
ctcaagcctt ggctcacttg                                                   20


<210> 20
<211> 18
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      primer

<400> 20
caaccaaagc caagaaga                                                     18


<210> 21
<211> 18
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      primer

<400> 21
cgaagctgaa gtaggaac                                                     18


<210> 22
<211> 22
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      probe

<400> 22
cactagctgc caatccatca tt                                                22


<210> 23
<211> 300
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      polynucleotide

<400> 23
atacatttca gggaaatagt cgccatcgac tgcactgtaa tacaagtcgg taactttttt       60

tgttttcttt cctttttctc cgctaataac gtcagtgtca ccaaccaaag ccaagaagac      120

cggagcagca ctagctgcca atccatcatt gtatttcttg tgaataaatg ccttgataga      180

ggcgtttgtc gttcctactt cagcttcgtc tgtgtaatgc acatccagat agaagccctt      240

ttgagccttc caagtgagcc aaggcttgag agcttctttg aattttgcac ctgcaacaac      300


<210> 24
<211> 840
<212> DNA
<213> Porphyromonas gingivalis

<400> 24
taaggtcaga taattatgaa aaaaatcatt ttctccgcac tctgtgcatt gccattgatt       60

gtgtctctaa cttcttgtgg gaagaagaaa gacgagccga accaaccctc cacacccgaa      120

gcagtaacca aaaccgtaac tatcgatgct tcgaaatacg aaacgtggca gtatttctct      180

ttttccaaag gtgaagtcgt aaatgttacc gactataaga acgatttgaa ctgggacatg      240

gctcttcacc gctatgacgt tcgtctcaat tgtggcgaaa gtggtaaggg aaaaggtggt      300

gccgtattct ccggcaagac agaaatggat caggctacta ccgttccgac agacggatat      360

actgtagatg ttctcggccg tattacagtc aagtacgaaa tgggacctga tggtcatcag      420

atggaatatg aagaacaggg cttcagcgaa gtgattaccg gcaagaagaa cgcacaggga      480

tttgcttcag gtggttggct ggaattctct cacggtcctg ccggtcccac ttacaagctg      540

agcaaaagag tcttcttcgt tcgtggtgct gatggtaata ttgccaaagt gcagttcact      600

gactatcagg atgcagaact caaaaaagga gtcatcactt tcacttatac ataccccgtt      660

aaataagtta agagggaaat atgaaaagtg tagtaacaaa gcaggccctc atcggcctgc      720

ttttctttag tataagtata tactcccatg cggccaaccc tccggcccaa cctaccgaca      780

ccatcgtatc cggcaatatc gcacttgagg atatagtggt gaccggtagc cgtacagccc      840


