                         SEQUENCE LISTING

<110>  California Institute of Technology
       da Veiga Beltrame, Eduardo
       Gehring, Jase
       Tambe, Akshay
       Pachter, Lior S
       Dilanyan, Taleen
 
<120>  EFFICIENT COMBINATORIAL BEAD BARCODING

<130>  CIT 8103-PCT / 30KJ-302412-WO

<150>  62/738,127
<151>  2018-09-28

<160>  47    

<170>  PatentIn version 3.5

<210>  1
<211>  59
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  H1-1-v3

<400>  1
acctccaaac ctcagggcct tttggccctg aggtttggag gtagatcgga atttttttt        59


<210>  2
<211>  59
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  H1-2-v3

<400>  2
actttcaaac ctcagggcct tttggccctg aggtttgaaa gtagatcgga atttttttt        59


<210>  3
<211>  59
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  H1-3-v3

<400>  3
aacatcaaac ctcagggcct tttggccctg aggtttgatg ttagatcgga atttttttt        59


<210>  4
<211>  59
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  H1-4-v3

<400>  4
aactccaaac ctcagggcct tttggccctg aggtttggag ttagatcgga atttttttt        59


<210>  5
<211>  59
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  H1-5-v3

<400>  5
actatcaaac ctcagggcct tttggccctg aggtttgata gtagatcgga atttttttt        59


<210>  6
<211>  59
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  H1-6-v3

<400>  6
aattccaaac ctcagggcct tttggccctg aggtttggaa ttagatcgga atttttttt        59


<210>  7
<211>  59
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  H1-7-v3

<400>  7
aatctcaaac ctcagggcct tttggccctg aggtttgaga ttagatcgga atttttttt        59


<210>  8
<211>  59
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  H1-8-v3

<400>  8
aaacacaaac ctcagggcct tttggccctg aggtttgtgt ttagatcgga atttttttt        59


<210>  9
<211>  59
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  H1-9-v3

<400>  9
aacttcaaac ctcagggcct tttggccctg aggtttgaag ttagatcgga atttttttt        59


<210>  10
<211>  59
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  H1-10-v3

<400>  10
accctcaaac ctcagggcct tttggccctg aggtttgagg gtagatcgga atttttttt        59


<210>  11
<211>  59
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  H2-1-v3

<400>  11
acctcctttc tcttgggcct tttggcccaa gagaaaggag gttgaggttt gtttttttt        59


<210>  12
<211>  59
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  H2-2-v3

<400>  12
actttctttc tcttgggcct tttggcccaa gagaaagaaa gttgaggttt gtttttttt        59


<210>  13
<211>  59
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  H2-3-v3

<400>  13
aacatctttc tcttgggcct tttggcccaa gagaaagatg tttgaggttt gtttttttt        59


<210>  14
<211>  59
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  H2-4-v3

<400>  14
aactcctttc tcttgggcct tttggcccaa gagaaaggag tttgaggttt gtttttttt        59


<210>  15
<211>  59
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  H2-5-v3

<400>  15
actatctttc tcttgggcct tttggcccaa gagaaagata gttgaggttt gtttttttt        59


<210>  16
<211>  59
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  H2-6-v3

<400>  16
aattcctttc tcttgggcct tttggcccaa gagaaaggaa tttgaggttt gtttttttt        59


<210>  17
<211>  59
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  H2-7-v3

<400>  17
aatctctttc tcttgggcct tttggcccaa gagaaagaga tttgaggttt gtttttttt        59


<210>  18
<211>  59
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  H2-8-v3

<400>  18
aaacactttc tcttgggcct tttggcccaa gagaaagtgt tttgaggttt gtttttttt        59


<210>  19
<211>  59
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  H2-9-v3

<400>  19
aacttctttc tcttgggcct tttggcccaa gagaaagaag tttgaggttt gtttttttt        59


<210>  20
<211>  59
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  H2-10-v3

<400>  20
accctctttc tcttgggcct tttggcccaa gagaaagagg gttgaggttt gtttttttt        59


<210>  21
<211>  59
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  H3-1-v3

<400>  21
acctcctaac actcgggcct tttggcccga gtgttaggag gtaagagaaa gtttttttt        59


<210>  22
<211>  59
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  H3-2-v3

<400>  22
actttctaac actcgggcct tttggcccga gtgttagaaa gtaagagaaa gtttttttt        59


<210>  23
<211>  59
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  H3-3-v3

<400>  23
aacatctaac actcgggcct tttggcccga gtgttagatg ttaagagaaa gtttttttt        59


<210>  24
<211>  59
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  H3-4-v3

<400>  24
aactcctaac actcgggcct tttggcccga gtgttaggag ttaagagaaa gtttttttt        59


<210>  25
<211>  59
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  H3-5-v3

<400>  25
actatctaac actcgggcct tttggcccga gtgttagata gtaagagaaa gtttttttt        59


<210>  26
<211>  59
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  H3-6-v3

<400>  26
aattcctaac actcgggcct tttggcccga gtgttaggaa ttaagagaaa gtttttttt        59


<210>  27
<211>  59
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  H3-7-v3

<400>  27
aatctctaac actcgggcct tttggcccga gtgttagaga ttaagagaaa gtttttttt        59


<210>  28
<211>  59
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  H3-8-v3

<400>  28
aaacactaac actcgggcct tttggcccga gtgttagtgt ttaagagaaa gtttttttt        59


<210>  29
<211>  59
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  H3-9-v3

<400>  29
aacttctaac actcgggcct tttggcccga gtgttagaag ttaagagaaa gtttttttt        59


<210>  30
<211>  59
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  H3-10-v3

<400>  30
accctctaac actcgggcct tttggcccga gtgttagagg gtaagagaaa gtttttttt        59


<210>  31
<211>  59
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  H4-1-v3

<400>  31
acctccttta aactgggcct tttggcccag tttaaaggag gtgagtgtta gtttttttt        59


<210>  32
<211>  59
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  H4-2-v3

<400>  32
actttcttta aactgggcct tttggcccag tttaaagaaa gtgagtgtta gtttttttt        59


<210>  33
<211>  59
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  H4-3-v3

<400>  33
aacatcttta aactgggcct tttggcccag tttaaagatg ttgagtgtta gtttttttt        59


<210>  34
<211>  59
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  H4-4-v3

<400>  34
aactccttta aactgggcct tttggcccag tttaaaggag ttgagtgtta gtttttttt        59


<210>  35
<211>  59
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  H4-5-v3

<400>  35
actatcttta aactgggcct tttggcccag tttaaagata gtgagtgtta gtttttttt        59


<210>  36
<211>  59
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  H4-6-v3

<400>  36
aattccttta aactgggcct tttggcccag tttaaaggaa ttgagtgtta gtttttttt        59


<210>  37
<211>  59
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  H4-7-v3

<400>  37
aatctcttta aactgggcct tttggcccag tttaaagaga ttgagtgtta gtttttttt        59


<210>  38
<211>  59
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  H4-8-v3

<400>  38
aaacacttta aactgggcct tttggcccag tttaaagtgt ttgagtgtta gtttttttt        59


<210>  39
<211>  59
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  H4-9-v3

<400>  39
aacttcttta aactgggcct tttggcccag tttaaagaag ttgagtgtta gtttttttt        59


<210>  40
<211>  59
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  H4-10-v3

<400>  40
accctcttta aactgggcct tttggcccag tttaaagagg gtgagtgtta gtttttttt        59


<210>  41
<211>  56
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  ACTPE2 primer

<400>  41
gtgactggag ttcagacgtg tgctcttccg atcttcgacg acgagcgcgg cgatat           56


<210>  42
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  58-R1P5 primer

<400>  42
aatgatacgg cgaccaccga gatctacact ctttccctac acgacgctct tccgatct         58


<210>  43
<211>  53
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  R2P7B1 primer

<400>  43
caagcagaag acggcatacg agataagatt acgtgactgg agttcagacg tgt              53


<210>  44
<211>  14
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Exemplary coupling segment

<400>  44
gggccttttg gccc                                                         14


<210>  45
<211>  29
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Input primer


<220>
<221>  misc_feature
<222>  (1)..(1)
<223>  5' acrydite

<400>  45
tttttttcta cacgacgctc ttccgatct                                         29


<210>  46
<211>  60
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Exemplary capping oligonucleotide


<220>
<221>  misc_feature
<222>  (33)..(42)
<223>  n is a, c, g, or t

<400>  46
tcgacgacga gcgcggcgat atcatcatcc atnnnnnnnn nntttaccta tagtttaaag       60


<210>  47
<211>  137
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Exemplary barcoded and capped bead oligonucleotide


<220>
<221>  misc_feature
<222>  (1)..(1)
<223>  5' acrydite

<220>
<221>  misc_feature
<222>  (8)..(8)
<223>  n is deoxyuridine

<220>
<221>  misc_feature
<222>  (96)..(105)
<223>  n is a, c, g, or t

<400>  47
tttttttnct acacgacgct cttccgatct hhhhhactcc aaachhhhht tctctttchh       60

hhhctcacaa tchhhhhctt taaactatag gtaaannnnn nnnnnatgga tgatgatatc      120

gccgcgctcg tcgtcga                                                     137


