                         SEQUENCE LISTING

<110>  THE BOARD OF REGENTS OF THE UNIVERSITY OF TEXAS SYSTEM
 
<120>  DNA PLASMID-LAUNCHED LIVE-ATTENUATED VACCINES FOR PLUS-SENSE 
       SINGLE STRANDED RNA VIRUSES

<130>  1149561.002213

<150>  62/726813
<151>  2018-09-04

<160>  1     

<170>  PatentIn version 3.5

<210>  1
<211>  10977
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Genome sequence of JE14-14-2

<400>  1
agaagtttat ctgtgtgaac ttcttggctt agtatcgtag agaagaatcg agagattagt       60

gcagtttaaa cagtttttta gaacggaaga taaccatgac taaaaaacca ggagggcccg      120

gtaaaaaccg ggctatcaat atgctgaaac gcggcctacc ccgcgtattc ccactagtgg      180

gagtgaagag ggtagtaatg agcttgttgg acggcagagg gccagtacgt ttcgtgctgg      240

ctcttatcac gttcttcaag tttacagcat tagccccgac caaggcgctt tcaggccgat      300

ggaaagcagt ggaaaagagt gtggcaatga aacatcttac tagtttcaaa cgagaacttg      360

gaacactcat tgacgccgtg aacaagcggg gcagaaagca aaacaaaaga ggaggaaatg      420

aaggctcaat catgtggctc gcgagcttgg cagttgtcat agcttgtgca ggagccatga      480

agttgtcgaa tttccagggg aagcttttga tgaccatcaa caacacggac attgcagacg      540

ttatcgtgat tcccacctca aaaggagaga acagatgctg ggtccgggca atcgacgtcg      600

gctacatgtg tgaggacact atcacgtacg aatgtcctaa gcttaccatg ggcaatgatc      660

cagaggatgt ggattgctgg tgtgacaacc aagaagtcta cgtccaatat ggacggtgca      720

cgcggaccag gcattccaag cgaagcagga gatccgtgtc ggtccaaaca catggggaga      780

gttcactagt gaataaaaaa gaggcttggc tggattcaac gaaagccaca cgatatctca      840

tgaaaactga gaactggatc ataaggaatc ctggctatgc tttcctggcg gcggtacttg      900

gctggatgct tggcagtaac aacggtcaac gcgtggtatt taccatcctc ctgctgttgg      960

tcgctccggc ttacagtttt aattgtctgg gaatgggcaa tcgtgacttc atagaaggag     1020

ccagtggagc cacttgggtg gacttggtgc tagaaggaga cagctgcttg acaatcatgg     1080

caaacgacaa accaacattg gacgtccgca tgattagcat cgaagctagc caacttgctg     1140

aggtcagaag ttactgctat catgcttcag tcactgacat ctcgacggtg gctcggtgcc     1200

ccacgactgg agaagcccac aacgagaagc gagctgatag tagctatgtg tgcaaacaag     1260

gcttcactga ccgtgggtgg ggcaacggat gtggattttt cgggaaggga agcattgaca     1320

catgtgcaaa attctcctgc accagtaaag cgattgggag aacaatccag ccagaaaaca     1380

tcaaatacaa agttggcatt tttgtgcatg gaaccaccac ttcggaaaac catgggaatt     1440

attcagcgca agttggggcg tcccaggcgg caaagtttac agtaacaccc aatgctcctt     1500

cggtagccct caaacttggt gactacggag aagtcacact ggactgtgag ccaaggagtg     1560

gactgaacac tgaagcgttt tacgtcatga ccgtggggtc aaagtcattt ctggtccata     1620

gggagtggtt tcatgacctc gctctcccct ggacgtcccc ttcgagcaca gcgtggagaa     1680

acagagaact cctcatggaa tttgaagggg cgcacgccac aaaacagtcc gttgttgctc     1740

ttgggtcaca ggaaggaggc ctccatcatg cgttggcagg agccatcgtg gtggagtact     1800

caagctcagt gaagttaaca tcaggccacc tgaaatgtag gctgaaaatg gacaaactgg     1860

ctctgaaagg cacaacctat ggcatgtgta cagaaaaatt ctcgttcgcg aaaaatccgg     1920

tggacactgg tcacggaaca gttgtcattg aactctccta ctctgggagt gatggcccct     1980

gcaaaattcc gattgtttcc gttgcgagcc tcaatgacat gacccccgtt gggcggctgg     2040

tgacagtgaa ccccttcgtc gcgacttcca gtgccaactc aaaggtgctg gtcgagatgg     2100

aacccccctt cggagactcc tacatcgtag ttggaagggg agacaagcag atcaaccacc     2160

attggcacaa agctggaagc acgctgggca aggccttttc aacaactttg aagggagctc     2220

aaagactggc agcgttgggc gacacagcct gggactttgg ctctattgga ggggtcttca     2280

actccatagg aagagccgtt caccaagtgt ttggtggtgc cttcagaaca ctctttgggg     2340

gaatgtcttg gatcacacaa gggctaatgg gtgccctact gctctggatg ggcgtcaacg     2400

cacgagaccg atcaattgct ttggccttct tagccacagg aggtgtgctc gtgttcttag     2460

cgaccaatgt gcatgctgac actggatgtg ccattgacat cacaagaaaa gagatgagat     2520

gtggaagtgg catcttcgtg cacaacgacg tggaagcctg ggtggatagg tataaatatt     2580

tgccagaaac gcccagatcc ctagcgaaga tcgtccacaa agcgcacaag gaaggcgtgt     2640

gcggagtcag atctgtcact agactggagc accaaatgtg ggaagccgta agggacgaat     2700

tgaacgtcct gctcaaagag aatgcagtgg acctcagtgt ggttgtgaac aagcccgtgg     2760

gaagatatcg ctcagcccct aaacgcctat ccatgacgca agagaagttt gaaatgggct     2820

ggaaagcatg gggaaaaagc atcctctttg ccccggaatt ggctaactcc acatttgtcg     2880

tagatggacc tgagacaaag gaatgccctg atgagcacag agcttggaac agcatgcaaa     2940

tcgaagactt cggctttggc atcacatcaa cccgtgtgtg gctgaaaatt agagaggaga     3000

gcactgacga gtgtgatgga gcgatcatag gcacggctgt caaaggacat gtggcagtcc     3060

atagtgactt gtcgtactgg attgagagtc gctacaacga cacatggaaa cttgagaggg     3120

cagtctttgg agaggtcaaa tcttgcactt ggccagagac acacaccctt tggggagatg     3180

atgttgagga aagtgaactc atcattccgc acaccatagc cggaccaaaa agcaagcaca     3240

atcggaggga agggtataag acacaaaacc agggaccttg ggatgagaat ggcatagtct     3300

tggactttga ttattgccca gggacaaaag tcaccattac agaggattgt agcaagagag     3360

gcccttcggt cagaaccact actgacagtg gaaagttgat cactgactgg tgctgtcgca     3420

gttgctccct tccgccccta cgattccgga cagaaaatgg ctgctggtac ggaatggaaa     3480

tcagacctgt tatgcatgat gaaacaacac tcgtcagatc acaggttcat gctttcaaag     3540

gtgaaatggt tgaccctttt cagctgggcc ttctggtgat gtttctggcc acccaggaag     3600

tccttcgcaa gaggtggacg gccagattga ccattcctgc ggttttgggg gtcctacttg     3660

tgctgatgct tgggggtatc acttacactg atttggcgag gtatgtggtg ctagtcgctg     3720

ctgctttcgc agaggccaac agtggaggag acgtcctgca ccttgctttg attgctgttt     3780

ttaagatcca accagcattt ttagtgatga acatgcttag cacgagatgg acgaaccaag     3840

aaaacgtggt tctggtccta ggggctgcct ttttccaatt ggcctcagta gatctgcaaa     3900

taggagtcca cggaatcctg aatgccgccg ctatagcatg gatgattgtc cgagcgatca     3960

ccttccccac aacctcctcc gtcaccatgc cagtcttagc gcttctaact ccggggatga     4020

gggctctata cctagacact tacagaatca tcctcctcgt catagggatt tgctccctgc     4080

tgcacgagag gaaaaagacc atggcgaaaa agaaaggagc tgtactcttg ggcttagcgc     4140

tcacatccac tggatggttc tcgcccacca ctatagctgc cggactaatg gtctgcaacc     4200

caaacaagaa gagagggtgg ccagctactg agtttttgtc ggcagttgga ttgatgtttg     4260

ccatcgtagg tggtttggcc gagttggata ttgaatccat gtcaataccc ttcatgctgg     4320

caggtctcat ggcagtgtcc tacgtggtgt caggaaaagc aacagatatg tggcttgaac     4380

gggccgccga catcagctgg gatatgggtg ctgcaatcac aggaagcagt cggaggctgg     4440

atgtgaaact ggatgatgac ggagattttc acttgattga tgatcccggt gttccatgga     4500

aggtctgggt cctgcgcatg tcttgcattg gcttagccgc cctcacgcct tgggccatcg     4560

ttcccgccgc tttcggttat tggctcactt taaaaacaac aaaaagaggg ggcgtgtttt     4620

gggacacgcc atccccaaaa ccttgctcaa aaggagacac cactacagga gtctaccgaa     4680

ttatggctag agggattctt ggcacttacc aggccggcgt cggagtcatg tacgagaatg     4740

ttttccacac actatggcac acaactagag gagcagccat tgtgagtgga gaaggaaaat     4800

tgacgccata ctggggtagt gtgaaagaag accgcatagc ttacggaggc ccatggaggt     4860

ttgaccgaaa atggaatgga acagatgacg tgcaagtgat cgtggtagaa ccggggaagg     4920

gcgcagtaaa catccagaca aaaccaggag tgtttcggac tcccttcggg gaggttgggg     4980

ctgttagtct ggattacccg cgaggaacat ccggctcacc cattctggat tccaatggag     5040

acattatagg cctatacggc aatggagttg agcttggcga tggctcatac gtcagcgcca     5100

tcgtgcaggg tgaccgtcag gaggaaccag tcccagaagc ttacacccca aacatgttga     5160

gaaagagaca gatgactgtg ctagatttgc accctggttc agggaaaacc aggaaaattc     5220

tgccacaaat aattaaggac gctatccagc agcgcctaag aacagctgtg ttggcaccga     5280

cgcgggtggt agcagcagaa atggcagaag ttttgagagg gctcccagta cgatatcaaa     5340

cttcagcagt gcagagagag caccaaggga atgaaatagt ggatgtgatg tgccacgcca     5400

ctctgaccca tagactgatg tcaccgaaca gagtgcccaa ctacaaccta tttgtcatgg     5460

atgaagctca tttcaccgac ccagccagta tagccgcacg aggatacatt gctaccaagg     5520

tggaattagg ggaggcagca gccatcttta tgacagcgac cccgcctgga accacggatc     5580

cttttcctga ctcaaatgcc ccaatccatg atttgcaaga tgagatacca gacagggcat     5640

ggagcagtgg atacgaatgg atcacagaat atgcgggtaa aaccgtgtgg tttgtggcga     5700

gcgtaaaaat ggggaatgag attgcaatgt gcctccaaag agcggggaaa aaggtcatcc     5760

aactcaaccg caagtcctat gacacagaat acccaaaatg taagaatgga gactgggatt     5820

ttgtcattac caccgacatc tctgaaatgg gggccaactt cggtgcgagc agggtcatcg     5880

actgtagaaa gagcgtgaaa cccaccatct tagaagaggg agaaggcaga gtcatcctcg     5940

gaaacccatc tcccataacc agtgcaagcg cagctcaacg gaggggcaga gtaggcagaa     6000

accccaatca agttggagat gaataccact atgggggggc taccagtgaa gatgacagta     6060

acctagccca ttggacagag gcaaagatca tgttagacaa catacacatg cccaatggac     6120

tggtggccca gctctatgga ccagagaggg aaaaggcttt cacaatggat ggcgaatacc     6180

gtctcagagg tgaagaaaag aaaaacttct tagagctgct taggacggct gacctcccgg     6240

tgtggctggc ctacaaggtg gcgtccaatg gcattcagta caccgacaga aagtggtgtt     6300

ttgatgggcc gcgtacgaat gccatactgg aggacaacac cgaggtagag atagtcaccc     6360

ggatgggtga gaggaaaatc ctcaagccga gatggcttga tgcaagagtt tatgcagatc     6420

accaggccct caagtggttc aaagactttg cagcagggaa gagatcagcc gttagcttca     6480

tagaggtgct cggtcgcatg cctgagcatt tcatgggaaa gacgcgggaa gctttagaca     6540

ccatgtactt ggttgcaacg gctgagaaag gtgggaaagc acaccgaatg gctctcgaag     6600

agctgccaga tgcactggaa accatcacac ttattgtcgc cattactgtg atgacaggag     6660

gattcttcct actaatgatg cagcgaaagg gtatagggaa gatgggtctt ggagctctag     6720

tgctcacact agctaccttc ttcctgtggg cggcagaggt tcctggaacc aaaatagcag     6780

ggaccctgct gatcgccctg ctgctgatgg tggttctcat cccagaaccg gaaaaacaga     6840

ggtcacagac agataaccaa ctggcggtgt ttctcatctg tgtcttgacc gtggttggag     6900

tggtggcagc aaacgagtac gggatgctag aaaaaaccaa agcggatctc aagagcatgt     6960

ttggcggaaa gacgcaggca tcaggactga ctggattgcc aagcatggca ctggacctgc     7020

gtccagccac agcctgggca ctgtatgggg ggagcacagt cgtgctaacc cctcttctga     7080

agcacctgat cacgtcggaa tacgtcacca catcgctagc ttcaattaac tcacaagctg     7140

gctcattatt cgtcttgcca cgaggcgtgc cttttaccga cctagacttg actgttggcc     7200

tcgtcttcct tggctgttgg ggtcaagtca ccctcacaac gtttctgaca gccatggttc     7260

tggcgacact tcactatggg tacatgctcc ctggttggca agcagaagca ctcagggctg     7320

cccagagaag gacagcggct ggaataatga agaatgccgt tgttgacgga atggtcgcca     7380

ctgatgtgcc tgaactggaa aggactactc ctctgatgca aaagaaagtc ggacaggtgc     7440

tcctcatagg ggtaagcgtg gcagcgttcc tcgtcaaccc taatgtcacc actgtgagag     7500

aagcaggggt gttggtgacg gcggctacgc ttactttgtg ggacaatgga gccagtgccg     7560

tttggaattc caccacagcc acgggactct gccatgtcat gcgaggtagc tacctggctg     7620

gaggctccat tgcttggact ctcatcaaga acgctaataa gccctccttg aaaaggggaa     7680

ggcctggggg caggacgcta ggggagcagt ggaaggaaaa actaaatgcc atgagtagag     7740

aagagttttt taaataccgg agagaggcca taatcgaggt ggaccgcact gaagcacgca     7800

gggccagacg tgaaaataac atagtgggag gacatccggt ttcgcgaggc tcagcaaaac     7860

tccgttggct cgtggagaaa ggatttgtct cgccaatagg aaaagtcatt gatctagggt     7920

gtgggcgtgg aggatggagc tactacgcag caaccctgaa gaaggtccag gaagtcagag     7980

gatacacgaa aggtggggcg ggacatgaag aaccgatgct catgcagagc tacggctgga     8040

acctggtctc cctgaagagt ggagtggacg tgttttacaa accttcagag cccagtgata     8100

ccctgttctg tgacataggg gaatcctccc caagtccaga agtagaagaa caacgcacac     8160

tacgcgtcct agagatgaca tctgactggt tgcaccgagg acctagagag ttctgcatta     8220

aagttctctg cccttacatg cccaaggtta tagaaaaaat ggaagttctg cagcgtcgct     8280

tcggaggtgg gctagtgcgt ctccccctgt cccgaaactc caatcacgag atgtattggg     8340

ttagtggagc cgctggcaat gtggtgcacg ctgtgaacat gaccagccag gtattactgg     8400

ggcgaatgga tcgcacagtg tggagagggc caaagtatga ggaagatgtc aacctaggga     8460

gcggaacaag agccgtggga aagggagaag tccatagcaa tcaggagaaa atcaagaaga     8520

gaatccagaa gcttaaagaa gaattcgcca caacgtggca caaagaccct gagcatccat     8580

accgcacttg gacataccac ggaagctatg aagtgaaggc tactggctca gccagctctc     8640

tcgtcaacgg agtggtgaag ctcatgagca aaccttggga cgccattgcc aacgtcacca     8700

ccatggccat gactgacacc accccttttg gacagcaaag agttttcaag gagaaagttg     8760

acacgaaggc tcctgagcca ccagctggag ccaaggaagt gctcaacgag accaccaact     8820

ggctgtgggc ctacttgtca cgggaaaaaa gaccccgctt gtgcaccaag gaagaattca     8880

ttaagaaagt taacagcaac gcggctcttg gagcagtgtt cgctgaacag aatcaatgga     8940

gcacggcgcg tgaggctgtg gatgacccgc ggttttggga gatggttgat gaagagaggg     9000

aaaaccatct gcgaggagag tgtcacacat gtatctacaa catgatggga aaaagagaga     9060

agaagcctgg agagtttgga aaagctaaag gaagcagggc catttggttc atgtggcttg     9120

gagcacggta tctagagttt gaagctttgg ggttcctgaa tgaagaccat tggctgagcc     9180

gagagaattc aggaggtgga gtggaaggct caggcgtcca aaagctggga tacatcctcc     9240

gtgacatagc aggaaagcaa ggagggaaaa tgtacgctga tgataccgcc gggtgggaca     9300

ctagaattac cagaactgat ttagaaaatg aagctaaggt actggagctc ctagacggtg     9360

aacaccgcat gctcgcccga gccataattg aactgactta caggcacaaa gtggtcaagg     9420

tcatgagacc tgcagcagaa ggaaagaccg tgatggacgt gatatcaaga gaagatcaaa     9480

gggggagtgg acaggtggtc acttatgctc ttaacacttt cacgaacatc gctgtccagc     9540

tcgtcaggct gatggaggct gagggggtca ttggaccaca acacttggaa catctaccta     9600

ggaaaaacaa gatagctgtc aggacctggc tctttgagaa tggagaggag agagtgacca     9660

ggatggcgat cagcggagac gactgtgccg tcaaaccgct ggacgacaga ttcgccacag     9720

ccctccactt cctcaacgca atgtcaaagg tcagaaaaga catccaggaa tggaagcctt     9780

cgcatggctg gcacgattgg cagcaagttc ccttctgttc taaccatttt caggagattg     9840

tgatgaaaga tggaaggagt atagttgtcc cgtgcagagg acaggatgag ctgataggca     9900

gggctcgcat ctctccagga gctggatgga atgtgaagga cacagcttgc ctggccaaag     9960

catatgcaca gatgtggcta ctcctatact tccatcgcag ggacttgcgt ctcatggcaa    10020

atgcgatttg ctcagcagtg ccagtagatt gggtgcccac aggcaggaca tcctggtcaa    10080

tacactcgaa aggagagtgg atgaccacgg aagacatgct gcaggtctgg aacagagttt    10140

ggattgaaga aaatgaatgg atgatggaca agactccaat cacaagctgg acagacgttc    10200

cgtatgtggg aaagcgcgag gacatctggt gtggcagcct catcggaacg cgatccagag    10260

caacctgggc tgagaacatc tatgcggcga taaaccaggt tagagctgtc attgggaaag    10320

aaaattatgt tgactacatg acctcactca ggagatacga agacgtcttg atccaggaag    10380

acagggtcat ctagtgtgat ttaaggtaga aaagtagact atgtaaacaa tgtaaatgag    10440

aaaatgcatg catatggagt caggccagca aaagctgcca ccggatactg ggtagacggt    10500

gctgcctgcg tctcagtccc aggaggactg ggttaacaaa tctgacaaca gaaagtgaga    10560

aagccctcag aaccgtctcg gaagtaggtc cctgctcact ggaagttgaa agaccaacgt    10620

caggccacaa atttgtgcca ctccgctagg gagtgcggcc tgcgcagccc caggaggact    10680

gggttaccaa agccgttgag gcccccacgg cccaagcctc gtctaggatg caatagacga    10740

ggtgtaagga ctagaggtta gaggagaccc cgtggaaaca acaacatgcg gcccaagccc    10800

cctcgaagct gtagaggagg tggaaggact agaggttaga ggagaccccg catttgcatc    10860

aaacagcata ttgacacctg ggaatagact gggagatctt ctgctctatc tcaacatcag    10920

ctactaggca cagagcgccg aagtatgtag ctggtggtga ggaagaacac aggatct       10977


