                         SEQUENCE LISTING

<110>  St. Jude Children's Research Hospital
 
<120>  GENOTYPING ASSAYS TO IDENTIFY MUTATIONS IN XAF1

<130>  S88435 1180WO (0050.2)

<150>  62/659,427
<151>  2018-04-18

<160>  6     

<170>  PatentIn version 3.5

<210>  1
<211>  1325
<212>  DNA
<213>  Homo sapiens


<220>
<221>  misc_feature
<223>  XAF1 polynucleotide sequence

<400>  1
atggaaggag acttctcggt gtgcaggaac tgtaaaagac atgtagtctc tgccaacttc       60

ccctccatga ggcttactgc ctgcggttcc tggtcctgtg tccggagtgt gaggagcctg      120

tccccaagga aaccatggag gagcactgca agcttgagca ccagcaggtt gggtgtacga      180

tgtgtcagca gagcatgcag aagtcctcgc tggagtttca taaggccaat gagtgccagg      240

agcgccctgt tgagtgtaag ttctgcaaac tggacatgca gctcagcaag ctggagctcc      300

acgagtccta ctgtggcagc cggacagagc tctgccaagg ctgtggccag ttcatcatgc      360

accgcatgct cgcccagcac agagatgtct gtcggagtga acaggcccag ctcgggaaag      420

gggaaagaat ttcagctcct gaaagggaaa tctactgtca ttattgcaac caaatgattc      480

cagaaaataa gtatttccac catatgggta aatgttgtcc agactcagag tttaagaaac      540

actttcctgt tggaaatcca gaaattcttc cttcatctct tccaagtcaa gctgctgaaa      600

atcaaacttc cacgatggag aaagatgttc gtccaaagac aagaagtata aacagatttc      660

ctcttcattc tgaaagttca tcaaagaaag caccaagaag caaaaacaaa accttggatc      720

cacttttgat gtcagagccc aagcccagga ccagctcccc tagaggagat aaagcagcct      780

atgacattct gaggagatgt tctcagtgtg gcatcctgct tcccctgccg atcctaaatc      840

aacatcagga gaaatgccgg tggttagctt catcaaaaag gaaaacaagt gagaaatttc      900

agctagattt ggaaaaggaa aggtactaca aattcaaaag atttcacttt taacactggc      960

attcctgcct acttgctgtg gtggtcttgt gaaaggtgat gggttttatt cgttgggctt     1020

taaaagaaaa ggtttggcag aactaaaaac aaaactcacg tatcatctca atagatacag     1080

aaaaggcttt tgataaaatt caacttgact tcatgttaaa aaccctcaac aaaccaggcg     1140

tcgaaggaac atacctcaaa ataataagag ccatctatga caaaaccaca gccaacatca     1200

tactgaatga gcaaaagctg gagcattact cttgagaagt agaacaaggc acttcagtcc     1260

tattcaacat agtactggaa gtctcgccac agcaatcagg caagagaaag aagtaaaagg     1320

caccc                                                                 1325


<210>  2
<211>  316
<212>  PRT
<213>  Homo sapiens


<220>
<221>  MISC_FEATURE
<222>  (1)..(316)
<223>  XAF1 protein sequence

<400>  2

Met Glu Gly Asp Phe Ser Val Cys Arg Asn Cys Lys Arg His Val Val 
1               5                   10                  15      


Ser Ala Asn Phe Thr Leu His Glu Ala Tyr Cys Leu Arg Phe Leu Val 
            20                  25                  30          


Leu Cys Pro Glu Cys Glu Glu Pro Val Pro Lys Glu Thr Met Glu Glu 
        35                  40                  45              


His Cys Lys Leu Glu His Gln Gln Val Gly Cys Thr Met Cys Gln Gln 
    50                  55                  60                  


Ser Met Gln Lys Ser Ser Leu Glu Phe His Lys Ala Asn Glu Cys Gln 
65                  70                  75                  80  


Glu Arg Pro Val Glu Cys Lys Phe Cys Lys Leu Asp Met Gln Leu Ser 
                85                  90                  95      


Lys Leu Glu Leu His Glu Ser Tyr Cys Gly Ser Arg Thr Glu Leu Cys 
            100                 105                 110         


Gln Gly Cys Gly Gln Phe Ile Met His Arg Met Leu Ala Gln His Arg 
        115                 120                 125             


Asp Val Cys Arg Ser Glu Gln Ala Gln Leu Gly Lys Gly Glu Arg Ile 
    130                 135                 140                 


Ser Ala Pro Glu Arg Glu Ile Tyr Cys His Tyr Cys Asn Gln Met Ile 
145                 150                 155                 160 


Pro Glu Asn Lys Tyr Phe His His Met Gly Lys Cys Cys Pro Asp Ser 
                165                 170                 175     


Glu Phe Lys Lys His Phe Pro Val Gly Asn Pro Glu Ile Leu Pro Ser 
            180                 185                 190         


Ser Leu Pro Ser Gln Ala Ala Glu Asn Gln Thr Ser Thr Met Glu Lys 
        195                 200                 205             


Asp Val Arg Pro Lys Thr Arg Ser Ile Asn Arg Phe Pro Leu His Ser 
    210                 215                 220                 


Glu Ser Ser Ser Lys Lys Ala Pro Arg Ser Lys Asn Lys Thr Leu Asp 
225                 230                 235                 240 


Pro Leu Leu Met Ser Glu Pro Lys Pro Arg Thr Ser Ser Pro Arg Gly 
                245                 250                 255     


Asp Lys Ala Ala Tyr Asp Ile Leu Arg Arg Cys Ser Gln Cys Gly Ile 
            260                 265                 270         


Leu Leu Pro Leu Pro Ile Leu Asn Gln His Gln Glu Lys Cys Arg Trp 
        275                 280                 285             


Leu Ala Ser Ser Lys Arg Lys Thr Ser Glu Lys Phe Gln Leu Asp Leu 
    290                 295                 300                 


Glu Lys Glu Arg Tyr Tyr Lys Phe Lys Arg Phe His 
305                 310                 315     


<210>  3
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic sequence


<220>
<221>  misc_feature
<222>  (1)..(20)
<223>  XAF1 forward primer

<400>  3
ccagtgatca tgcccttcct                                                   20


<210>  4
<211>  21
<212>  DNA
<213>  Artificial

<220>
<223>  Synthetic sequence

<400>  4
ccactctgag gcatggttta g                                                 21


<210>  5
<211>  62
<212>  DNA
<213>  Artificial

<220>
<223>  Synthetic sequence


<220>
<221>  misc_feature
<222>  (1)..(62)
<223>  primer with forward sequence containing an EcoRI site plus a FLAG
       tag sequence for amplification of E134*-XAF1 cDNA

<400>  5
tggaattcgc caccatggac tacaaagacg atgacgacaa ggaaggagac ttctcggtgt       60

gc                                                                      62


<210>  6
<211>  19
<212>  DNA
<213>  Artificial

<220>
<223>  Synthetic sequence


<220>
<221>  misc_feature
<222>  (1)..(19)
<223>  reverse primer for amplification of E134*-XAF1 cDNA

<400>  6
gggccaagat catggggtt                                                    19


