SEQUENCE LISTING

<110> PathogenDx, Inc.

<120> Microarray Based Multiplex Pathogen Analysis and Uses
      Thereof

<130> D7550PCT

<141> 2019-03-08

<150> US 16/158,276
<151> 2018-10-11

<150> US 15/916,036
<151> 2018-03-08

<150> US 15/916,036
<151> 2018-03-08

<160> 157

<210> 1
<211> 23
<212> DNA
<213> Artificial Sequence

<220> 
<223> Forward primer for amplification of the 16S rDNA HV3 locus
      in all bacteria

<400> 1
tttcacaytg gractgagac acg  23

<210> 2
<211> 27
<212> DNA
<213> Artificial Sequence

<220> 
<223> Reverse primer for amplification of the 16S rDNA HV3 locus
      in all bacteria  

<400> 2
tttgactacc agggtatcta atcctgt  27 

<210> 3
<211> 28
<212> DNA
<213> Artificial Sequence

<220> 
<223> Forward primer for amplification of the Stx1 locus in 
      pathogenic Escherichia coli  

<400> 3
tttataatct acggcttatt gttgaacg  28

<210> 4
<211> 29
<212> DNA
<213> Artificial Sequence

<220> 
<223> Reverse primer for amplification of the Stx1 locus in 
      pathogenic Escherichia coli

<400> 4
tttggtatag ctactgtcac cagacaatg  29

<210> 5
<211> 26
<212> DNA
<213> Artificial Sequence

<220> 
<223> Forward primer for amplification of the Stx2 locus in 
      pathogenic Escherichia coli

<400> 5
tttgatgcat ccagagcagt tctgcg  26

<210> 6
<211> 27
<212> DNA
<213> Artificial Sequence

<220> 
<223> Reverse primer for amplification of the Stx2 locus in 
      pathogenic Escherichia coli

<400> 6
tttgtgaggt ccacgtctcc cggcgtc  27

<210> 7
<211> 28
<212> DNA
<213> Artificial Sequence

<220> 
<223> Forward primer for amplification of the InvA locus in all
      Salmonella

<400> 7
tttattatcg ccacgttcgg gcaattcg  28

<210> 8
<211> 28
<212> DNA
<213> Artificial Sequence

<220> 
<223> Reverse primer for amplification of the InvA locus in all
      Salmonella

<400> 8
tttcttcatc gcaccgtcaa aggaaccg  28

<210> 9
<211> 26
<212> DNA
<213> Artificial Sequence

<220> 
<223> Forward primer for amplification of the tuf locus in 
      all Escherichia coli

<400> 9
tttcagagtg ggaagcgaaa atcctg  26

<210> 10
<211> 26
<212> DNA
<213> Artificial Sequence

<220> 
<223> Reverse primer for amplification of the tuf locus in 
      all Escherichia coli

<400> 10
tttacgccag tacaggtaga cttctg  26

<210> 11
<211> 30
<212> DNA
<213> Artificial Sequence

<220> 
<223> Forward primer for amplification of the 16S rDNA HV3 locus
      in Enterobacteriaceae

<400> 11
ttaccttcgg gcctcttgcc atcrgatgtg  30

<210> 12
<211> 33
<212> DNA
<213> Artificial Sequence

<220> 
<223> Reverse primer for amplification of the 16S rDNA HV3 locus  
      in Enterobacteriaceae

<400> 12
ttggaattct acccccctct acragactca agc  33

<210> 13
<211> 26
<212> DNA
<213> Artificial Sequence

<220> 
<223> Forward primer for amplification of the ITS2 locus in all 
      yeast and mold/fungi

<400> 13
tttactttya acaayggatc tcttgg  26

<210> 14
<211> 26
<212> DNA
<213> Artificial Sequence

<220> 
<223> Reverse primer for amplification of the ITS2 locus in all
      yeast and mold/fungi

<400> 14
tttcttttcc tccgcttatt gatatg  26

<210> 15
<211> 28
<212> DNA
<213> Artificial Sequence

<220> 
<223> Forward primer for amplification of the ITS2 locus in
      Aspergillus spp

<400> 15
tttaaaggca gcggcggcac cgcgtccg  28

<210> 16
<211> 27
<212> DNA
<213> Artificial Sequence

<220> 
<223> Reverse primer for amplification of the ITS2 locus in
      Aspergillus spp

<400> 16
ttttcttttc ctccgcttat tgatatg  27

<210> 17
<211> 25
<212> DNA
<213> Artificial Sequence

<220> 
<223> Forward primer for amplification of the ITS1 locus in 
      Cannabis/plant

<400> 17
tttgcaacag cagaacgacc cgtga  25

<210> 18
<211> 25
<212> DNA
<213> Artificial Sequence

<220> 
<223> Reverse primer for amplification of the ITS1 locus in 
      Cannabis/plant

<400> 18
tttcgataaa cacgcatctc gattg  25

<210> 19
<211> 24
<212> DNA
<213> Artificial Sequence

<220> 
<223> Forward primer for amplification of the 16S rDNA HV3 locus
      in all bacteria

<400> 19
tttactgaga cacggyccar actc  24

<210> 20
<211> 24
<212> DNA
<213> Artificial Sequence

<220> 
<223> Reverse primer for amplification of the 16S rDNA HV3 Locus
      in all bacteria

<400> 20
tttgtattac cgcggctgct ggca  24

<210> 21
<211> 28
<212> DNA
<213> Artificial Sequence

<220> 
<223> Forward primer for amplification of the Stx1 locus in 
      pathogenic Escherichia coli

<400> 21
tttatgtgac aggatttgtt aacaggac  28

<210> 22
<211> 28
<212> DNA
<213> Artificial Sequence

<220> 
<223> Reverse primer for amplification of the Stx1 locus in 
      pathogenic Escherichia coli

<400> 22
tttctgtcac cagacaatgt aaccgctg  28
<210> 23
<211> 24
<212> DNA
<213> Artificial Sequence

<220> 
<223> Forward primer for amplification of the Stx2 locus in 
      pathogenic Escherichia coli

<400> 23
tttttgtcact gtcacagcag aag  24

<210> 24
<211> 25
<212> DNA
<213> Artificial Sequence

<220> 
<223> Reverse primer for amplification of the Stx2 locus in 
      pathogenic Escherichia coli

<400> 24
tttgcgtcat cgtatacaca ggagc  25

<210> 25
<211> 26
<212> DNA
<213> Artificial Sequence

<220> 
<223> Forward primer for amplification of the InvA locus in all
      Salmonella us

<400> 25
ttttatcgtt attaccaaag gttcag  26

<210> 26
<211> 28
<212> DNA
<213> Artificial Sequence

<220> 
<223> Reverse primer for amplification of the InvA locus in all
      Salmonella

<400> 26
tttcctttcc agtacgcttc gccgttcg  28

<210> 27
<211> 25
<212> DNA
<213> Artificial Sequence

<220> 
<223> Forward primer for amplification of the tuf locus in 
      all Escherichia coli

<400> 27
tttgttgtta ccggtcgtgt agaac  25

<210> 28
<211> 28
<212> DNA
<213> Artificial Sequence

<220> 
<223> Reverse primer for amplification of the tuf locus in 
      all Escherichia coli

<400> 28
tttcttctga gtctctttga taccaacg  28

<210> 29
<211> 30
<212> DNA
<213> Artificial Sequence

<220> 
<223> Forward primer for amplification of the 16S rDNA HV3 locus
      in Enterobacteriaceae

<400> 29
ttatattgca caatgggcgc aagcctgatg  30

<210> 30
<211> 25
<212> DNA
<213> Artificial Sequence

<220> 
<223> Reverse primer for amplification of the 16S rDNA HV3 locus
      in Enterobacteriaceae

<400> 30
ttttgtatta ccgcggctgc tggca  25

<210> 31
<211> 23
<212> DNA
<213> Artificial Sequence

<220> 
<223> Forward primer for amplification of the ITS2 locus in all
      yeast and mold/fungi

<400> 31
tttgcatcga tgaagarcgy agc  23

<210> 32
<211> 22
<212> DNA
<213> Artificial Sequence

<220> 
<223> Reverse primer for amplification of the ITS2 locus in all
      yeast and mold/fungi

<400> 32
tttcctccgc ttattgatat gc  22

<210> 33
<211> 26
<212> DNA
<213> Artificial Sequence

<220> 
<223> Forward primer for amplification of the ITS2 locus in
      Aspergillus spp

<400> 33
tttcctcgag cgtatggggc tttgtc  26

<210> 34
<211> 24
<212> DNA
<213> Artificial Sequence

<220> 
<223> Reverse primer for amplification of the ITS2 locus in
  Aspergillus spp

<400> 34
tttttcctcc gcttattgat atgc  24

<210> 35
<211> 27
<212> DNA
<213> Artificial Sequence

<220> 
<223> Forward primer for amplification of the ITS1 locus in 
      Cannabis plant

<400> 35
tttcgtgaac acgttttaaa cagcttg  27

<210> 36
<211> 24
<212> DNA
<213> Artificial Sequence

<220> 
<223> Reverse primer for amplification of the ITS1 locus in 
      Cannabis/plant

<400> 36
tttccaccgc acgagccacg cgat  24

<210> 37
<211> 30
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the 16S locus for total aerobic
      bacteria with high sensitivity

<400> 37
tttttttttc ctacgggagg cagttttttt  30

<210> 38
<211> 30
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the 16S locus for total aerobic 
      bacteria with medium sensitivity

<400> 38
ttttttttcc ctacgggagg catttttttt  30

<210> 39
<211> 30
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the 16S locus for total aerobic
      bacteria with low sensitivity

<400> 39
tttattttcc ctacgggagg cttttatttt  30

<210> 40
<211> 30
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the 16S locus in Enterobacteriaceae
      with low sensitivity

<400> 40
tttattctat tgacgttacc catttatttt  30

<210> 41
<211> 30
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the 16S locus in Enterobacteriaceae
      with medium sensitivity

<400> 41
ttttttctat tgacgttacc cgtttttttt  30

<210> 42
<211> 30
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the 16S locus in Escherichia coli and
      Shigella  

<400> 42
ttttctaata cctttgctca ttgactcttt  30

<210> 43
<211> 30
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the 16S locus in Escherichia
      coli and Shigella

<400> 43
ttttttaagg gagtaaagtt aatatttttt  30

<210> 44
<211> 30
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the 16S locus in Escherichia coli and
      Shigella 

<400> 44
ttttctcctt tgctcattga cgttattttt  30

<210> 45
<211> 30
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the 16S locus in Bacillus spp. Group 1

<400> 45
tttttcagtt gaataagctg gcactctttt  30

<210> 46
<211> 30
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the 16S locus in Bacillus spp. Group 2

<400> 46
ttttttcaag taccgttcga atagtttttt  30

<210> 47
<211> 36
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the 16S locus in bile-tolerant gram
      negative bacteria with high sensitivity

<400> 47
tttttctatg cagtcatgct gtgtgtrtgt cttttt  36

<210> 48
<211> 34
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the 16S locus in bile-tolerant gram
      negative bacteria with medium sensitivity

<400> 48
tttttctatg cagccatgct gtgtgtrttt tttt  34

<210> 49
<211> 34
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the 16S locus in bile-tolerant gram
      negative bacteria with low sensitivity

<400> 49
tttttctatg cagtcatgct gcgtgtrttt tttt  34

<210> 50
<211> 30
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the 16S locus in Campylobacter spp.
 
<400> 50
ttttttatga cacttttcgg agctcttttt  30

<210> 51
<211> 34
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the 16S locus in Chromobacterium spp.

<400> 51
ttttattttc ccgctggtta atacccttta tttt  34

<210> 52
<211> 30
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the 16S locus in Citrobacter spp.

<400> 52
ttttttcctt agccattgac gttatttttt  30

<210> 53
<211> 30
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the 16S locus in Clostridium spp.

<400> 53
ttttctggam gataatgacg gtacagtttt  30

<210> 54
<211> 30
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the 16S locus in Coliform and
      Enterobacteriaceae  

<400> 54
ttttttctat tgacgttacc cgcttttttt  30

<210> 55
<211> 30
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the 16S locus in Aeromonas salmonicida
      Aeromonas hydrophilia

<400> 55
tttttgccta atacgtrtca actgcttttt  30

<210> 56
<211> 30
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the 16S locus in Aeromonas spp.

<400> 56
ttattttctg tgacgttact cgcttttatt  30

<210> 57
<211> 30
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the 16S locus in Alkanindiges spp.

<400> 57
tttttaggct actgrtacta atatcttttt  30

<210> 58
<211> 34
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the 16S locus in Bacillus pumilus

<400> 58
tttatttaag tgcragagta actgctattt tatt  34

<210> 59
<211> 34
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for bacterial etuf gene

<400> 59
ttttttccat caaagttggt gaagaatctt tttt  34

<210> 60
<211> 30
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the 16S locus in Hafnia spp.

<400> 60
ttttttctaa ccgcagtgat tgatcttttt  30

<210> 61
<211> 34
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for bacterial InvA gene

<400> 61
tttttttatt gatgccgatt tgaaggcctt tttt  34

<210> 62
<211> 30
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the 16S locus in Klebsiella oxytoca

<400> 62
ttttttctaa ccttattcat tgatcttttt  30

<210> 63
<211> 30
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the 16S locus in Klebsiella pneumoniae

<400> 63
ttttttctaa ccttggcgat tgatcttttt  30

<210> 64
<211> 34
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the 16S locus in Legionella spp.

<400> 64
tttattctga taggttaaga gctgatcttt attt  34

<210> 65
<211> 30
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the 16S locus in Listeria spp.

<400> 65
ttttctaagt actgttgtta gagaattttt  30

<210> 66
<211> 30
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the 16S locus in Panteoa agglomerans

<400> 66
ttttttaacc ctgtcgattg acgccttttt  30

<210> 67
<211> 30
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the 16S locus in Panteoa stewartii

<400> 67
ttttttaacc tcatcaattg acgccttttt  30

<210> 68
<211> 30
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the 16S locus in Pseudomonas aeruginosa

<400> 68
tttttgcagt aagttaatac cttgtctttt  30

<210> 69
<211> 30
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the 16S locus in Pseudomonas cannabina

<400> 69
tttttttacg tatctgtttt gactcttttt  30

<210> 70
<211> 30
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the 16S locus in Pseudomonas spp.

<400> 70
ttttttgttac cracagaata agcattttt  30

<210> 71
<211> 30
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the 16S locus in Pseudomonas spp.

<400> 71
ttttttaagc actttaagtt gggatttttt  30

<210> 72
<211> 34
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the 16S locus in Pseudomonas spp.

<400> 72
tttattttaa gcactttaag ttgggatttt attt  34

<210> 73
<211> 30
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the 16S locus in Salmonella bongori

<400> 73
tttttttaat aaccttgttg attgtttttt  30

<210> 74
<211> 30
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the 16S locus in Salmonella enterica

<400> 74
tttttttgtt gtggttaata accgattttt  30

<210> 75
<211> 30
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the 16S locus in Salmonella enterica

<400> 75
tttttttaac cgcagcaatt gactcttttt  30

<210> 76
<211> 30
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the 16S locus in Salmonella enterica

<400> 76
ttttttctgt taataaccgc agcttttttt  30

<210> 77
<211> 34
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the 16S locus in Serratia spp.

<400> 77
tttattctgt gaacttaata cgttcatttt tatt  34

<210> 78
<211> 34
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the 16S locus in Staphylococcus aureus

<400> 78
tttattttca tatgtgtaag taactgtttt attt  34

<210> 79
<211> 30
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the 16S locus in Staphylococcus aureus

<400> 79
ttttttcata tgtgtaagta actgtttttt  30

<210> 80
<211> 34
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the 16S locus in Streptomyces spp.

<400> 80
ttttatttta agaagcgaga gtgactttta tttt  34

<210> 81
<211> 30
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for bacterial stx1 gene

<400> 81
ttttttcttt ccaggtacaa cagctttttt  30

<210> 82
<211> 30
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for bacterial stx2 gene

<400> 82
ttttttgcac tgtctgaaac tgcctttttt  30

<210> 83
<211> 30
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the 16S locus in Vibrio spp.

<400> 83
ttttttgaag gtggttaagc taattttttt  30

<210> 84
<211> 30
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the 16S locus in Xanthamonas spp.

<400> 84
ttttttgtta atacccgatt gttctttttt  30

<210> 85
<211> 30
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the 16S locus in Ysernia pestis
 
<400> 85
tttttttgag tttaatacgc tcaacttttt  30

<210> 86
<211> 38
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the ITS2 locus in total yeast and mold 
      with high sensitivity

<400> 86
ttttttttga atcatcgart ctttgaacgc attttttt  38

<210> 87
<211> 31
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the ITS2 locus in total yeast and mold
      with low sensitivity

<400> 87
ttttttttga atcatcgart ctcctttttt t  31

<210> 88
<211> 36
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the ITS2 locus in total yeast and mold 
      with medium sensitivity

<400> 88
ttttttttga atcatcgart ctttgaacgt tttttt  36

<210> 89
<211> 34
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the ITS2 locus in Alternaria spp.

<400> 89
ttttttcaaa ggtctagcat ccattaagtt tttt  34

<210> 90
<211> 34
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the ITS2 locus in Aspergillus flavus

<400> 90
ttttttcgca aatcaatctt tttccagtct tttt  34

<210> 91
<211> 40
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the ITS2 locus in Aspergillus flavus

<400> 91
tttttttctt gccgaacgca aatcaatctt tttttttttt  40

<210> 92
<211> 34
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the ITS2 locus in Aspergillus fumigatus

<400> 92
tttcttttcg acacccaact ttatttcctt attt  34

<210> 93
<211> 30
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the ITS2 locus in Aspergillus fumigatus

<400> 93
tttttttgcc agccgacacc cattcttttt  30

<210> 94
<211> 30
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the ITS2 locus in Aspergillus nidulans

<400> 94
ttttttggcg tctccaacct tacccttttt  30

<210> 95
<211> 30
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the ITS2 locus in Aspergillus niger

<400> 95
ttttttcgac gttttccaac catttctttt  30

<210> 96
<211> 34
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the ITS2 locus in Aspergillus niger

<400> 96
ttttttttcg acgttttcca accatttctt tttt  34

<210> 97
<211> 30
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the ITS2 locus in Aspergillus niger

<400> 97
tttttttcgc cgacgttttc caattttttt  30

<210> 98
<211> 30
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the ITS2 locus in Aspergillus terreus

<400> 98
tttttcgacg catttatttg caaccctttt  30

<210> 99
<211> 34
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the ITS2 locus in Blumeria spp.

<400> 99
tttatttgcc aaaamtcctt aattgctctt tttt  34

<210> 100
<211> 40
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the ITS2 locus in Botrytis spp.

<400> 100
tttttttcat ctctcgttac aggttctcgg ttcttttttt  40

<210> 101
<211> 34
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the ITS2 locus in Candida albicans

<400> 101
tttttttttg aaagacggta gtggtaagtt tttt  34

<210> 102
<211> 34
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the ITS2 locus in Candida spp. Group 1

<400> 102
tttttttgtt tggtgttgag cratacgtat tttt  34

<210> 103
<211> 35
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the ITS2 locus in Candida spp. Group 2

<400> 103
ttttactgtt tggtaatgag tgatactctc atttt  35

<210> 104
<211> 34
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the ITS2 locus in Chaetomium spp.

<400> 104
tttcttttgg ttccggccgt taaaccattt tttt  34

<210> 105
<211> 34
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the ITS2 locus in Cladosporium spp.

<400> 105
ttttttttgt ggaaactatt cgctaaagtt tttt  34

<210> 106
<211> 34
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the ITS2 locus in Erysiphe spp.

<400> 106
tttcttttta cgattctcgc gacagagttt tttt  34

<210> 107
<211> 34
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the ITS2 locus in Fusarum oxysporum

<400> 107
tttttttctc gttactggta atcgtcgttt tttt  34

<210> 108
<211> 34
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the ITS2 locus in Fusarium spp.

<400> 108
ttttttttaa cacctcgcra ctggagattt tttt  34

<210> 109
<211> 34
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the ITS2 locus in Golovinomyces spp.

<400> 109
ttttttccgc ttgccaatca atccatctct tttt  34

<210> 110
<211> 34
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the ITS2 locus in Histoplasma 
      capsulatum

<400> 110
tttatttttg tcgagttccg gtgccctttt attt  34

<210> 111
<211> 34
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the ITS2 locus in Isaria spp.

<400> 111
tttatttttc cgcggcgacc tctgctcttt attt  34

<210> 112
<211> 34
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the ITS2 locus in Monocillium spp.

<400> 112
tttcttttga gcgacgacgg gcccaatttt cttt  34

<210> 113
<211> 30
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the ITS2 locus in Mucor spp.

<400> 113
ttttctccaw tgagyacgcc tgtttctttt  30

<210> 114
<211> 34
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the ITS2 locus in Myrothecium spp.

<400> 114
tttattttcg gtggccatgc cgttaaattt tatt  34

<210> 115
<211> 34
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the ITS2 locus in Oidiodendron spp.

<400> 115
tttttttgcg tagtacatct ctcgctcatt tttt  34

<210> 116
<211> 34
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the ITS2 locus in Penicillium oxalicum

<400> 116
ttttttacac catcaatctt aaccaggcct tttt  34

<210> 117
<211> 34
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the ITS2 locus in Penicillium paxilli

<400> 117
ttttttcccc tcaatcttta accaggcctt tttt  34

<210> 118
<211> 34
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the ITS2 locus in Penicillium spp.

<400> 118
ttttttcaac ccaaattttt atccaggcct tttt  34

<210> 119
<211> 34
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the ITS2 locus in Phoma/Epicoccum ssp.

<400> 119
tttttttgca gtacatctcg cgctttgatt tttt  34

<210> 120
<211> 34
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the ITS2 locus in Podosphaera spp.

<400> 120
ttttttgacc tgccaaaacc cacataccat tttt  34

<210> 121
<211> 34
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the ITS2 locus in Podosphaera spp.

<400> 121
ttttttttag tcaygtatct cgcgacagtt tttt  34

<210> 122
<211> 34
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the ITS2 locus in Phythium oligandrum

<400> 122
ttttatttaa aggagacaac accaattttt attt  34

<210> 123
<211> 34
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the ITS2 locus in Rhodoturula spp.

<400> 123
ttttttctcg ttcgtaatgc attagcactt tttt  34

<210> 124
<211> 34
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the ITS2 locus in Stachybotrys spp.

<400> 124
tttcttctgc atcggagctc agcgcgtttt attt  34

<210> 125
<211> 34
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for the ITS2 locus in Trichoderma spp.

<400> 125
tttttcctcc tgcgcagtag tttgcacatc tttt  34

<210> 126
<211> 34
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for ITS1 locus in Cannabis species

<400> 126
ttttttaatc tgcgccaagg aacaatattt tttt  34

<210> 127
<211> 34
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for ITS1 locus in Cannabis species

<400> 127
tttttgcaat ctgcgccaag gaacaatatt tttt  34

<210> 128
<211> 34
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for ITS1 locus in Cannabis species

<400> 128
tttatttctt gcgccaagga acaatatttt attt  34

<210> 129
<211> 32
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for image calibration with high sensitivity

<400> 129
ttttctatgt atcgatgttg agaaattttt tt  32

<210> 130
<211> 32
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for image calibration with low sensitivity

<400> 130
ttttctagat acttgtgtaa gtgaattttt tt  32

<210> 131
<211> 32
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for image calibration with medium
      sensitivity

<400> 131
ttttctaagt catgttgttg aagaattttt tt  32

<210> 132
<211> 34
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for negative control

<400> 132
ttttttctac tacctatgct gattcactct tttt  34

<210> 133
<211> 24
<212> DNA
<213> Artificial Sequence

<220> 
<223> Forward universal preamplification primer for fungus and
      bacteria

<400> 133
ttcagcctct gtacgtgctt catg  24

<210> 134
<211> 24
<212> DNA
<213> Artificial Sequence

<220> 
<223> Reverse universal preamplification primer for fungus and 
      bacteria

<400> 134
ttcagcctct gatcgtgctt ctag  24

<210> 135
<211> 26
<212> DNA
<213> Artificial Sequence

<220> 
<223> Forward RSG Primer for amplification all fungus

<400> 135
tttactttca acaayggatc tcttgg  26

<210> 136
<211> 23
<212> DNA
<213> Artificial Sequence

<220> 
<223> Reverse RSG Primer for amplification of all fungus

<400> 136
cttttcctcc gcttattgat atg  23

<210> 137
<211> 23
<212> DNA
<213> Artificial Sequence

<220> 
<223> Forward RSG Primer for amplification of all bacteria

<400> 137
tttcacactg gractgagac acg  23

<210> 138
<211> 24
<212> DNA
<213> Artificial Sequence

<220> 
<223> Reverse RSG Primer for amplification of all bacteria

<400> 138
ttttgtatta ccgcggctgc tggc  24

<210> 139
<211> 23
<212> DNA
<213> Artificial Sequence

<220> 
<223> Forward Primer for amplification of all fungus

<400> 139
tttgcatcga tgaagaacgc agc  23

<210> 140
<211> 23
<212> DNA
<213> Artificial Sequence

<220> 
<223> Reverse Primer for amplification of all fungus

<400> 140
ttttcctccg cttattgata tgc  23

<210> 141
<211> 24
<212> DNA
<213> Artificial Sequence

<220> 
<223> Forward Primer for amplification of all bacteria

<400> 141
tttcacactg gractgagac acgg  24

<210> 142
<211> 30
<212> DNA
<213> Artificial Sequence

<220> 
<223> Internal reference probe sequence for total aerobic
      bacteria

<400> 142
tttttttttc catcgggagc gagttttttt  30

<210> 143
<211> 36
<212> DNA
<213> Artificial Sequence

<220> 
<223> Internal reference probe sequence for bile-tolerant gram-
      negative bacteria

<400> 143
tttttctatg tattcctgat gtagatrtgt cttttt  36

<210> 144
<211> 30
<212> DNA
<213> Artificial Sequence

<220> 
<223> Internal reference probe sequence for Enterobacteriaceae
      and Coliform bacteria

<400> 144
ttttttctct tgagcttacc ccgttttttt  30

<210> 145
<211> 38
<212> DNA
<213> Artificial Sequence

<220> 
<223> Internal reference probe sequence for total yeast and mold

<400> 145
ttttttttgc atcatagaaa ctttgtacgc attttttt  38

<210> 146
<211> 34
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for Golovinomyces spp.

<400> 146
tttatttaat caatccatca tctcaagtct tttt  34

<210> 147
<211> 34
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for Listeria spp.

<400> 147
tttattttga taagagtaac tgcttgcttt attt  34

<210> 148
<211> 40
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for Mucor spp.

<400> 148
ttttttctcc awtgagyacg cctgtttcag tatctttttt  40

<210> 149
<211> 34
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for Saccharomyces spp.

<400> 149
tttatcttag gcgaacaatg ttcttaaatc tttt  34

<210> 150
<211> 34
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for Aspergillus terreus

<400> 150
ttttttacgc atttatttgc aacttgcctt tttt  34

<210> 151
<211> 30
<212> DNA
<213> Artificial Sequence

<220> 
<223> Probe sequence for Podosphaera spp.

<400> 151
tttttcgtcc cctaaacata gtggcttttt  30

<210> 152
<211> 440
<212> DNA
<213> Artificial Sequence

<220> 
<223> Consensus sequence of ITS2 domain in eukaryotes

<220>
<221> misc_feature
<222> 1..37, 86..120, 146..379, 403..440
<223> n is any of a, c, t, or g

<400> 152
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnact tycaacaayg   50
gatctcttgg ttctggcatc gatgaagaac gcagcnnnnn nnnnnnnnnn  100
nnnnnnnnnn nnnnnnnnnn gtgaatcatc gartctttga acgcannnnn  150
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn  200
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn  250
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn  300
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn  350
nnnnnnnnnn nnnnnnnnnn nnnnnnnnng catatcaata agcggaggaa  400
aannnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn             440

<210> 153
<211> 333
<212> DNA
<213> Artificial Sequence

<220> 
<223> Consensus sequence of rDNA domain in prokaryotes

<220>
<221> misc_feature
<222> 1..37, 59..64, 85..114, 137..203, 218..241, 263..333
<223> n is any of a, c, t, or g

<400> 153
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnncac aytggractg   50
agacacggnn nnnnctccta cgggaggcag cagtnnnnnn nnnnnnnnnn  100
nnnnnnnnnn nnnnayssag cmaygccgcg tgdrbgnnnn nnnnnnnnnn  150
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn  200
nnnattgacg ttacccgcnn nnnnnnnnnn nnnnnnnnnn ntgccagcag  250
ccgcggtaat acnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn  300
nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnn                    333

<210> 154
<211> 439
<212> DNA
<213> Artificial Sequence

<220> 
<223> Internal reference sequence for use with the ITS2 domain
      in eukaryotes

<400> 154
tactattcag cctctgtacg tgcttcatgt aaattgaact ttcaacaacg   50
gatctcttgg ttctggcatc gatgaagaac gcagcgactt gcgataagta  100
atgtgaattg cagaattcag tgcatcatag aaactatgta cgcaaattgc  150
gccccttggt attccggggg gcatgcctgt tcgagcgtca tttcaaccct  200
caagcttagc ttggtattga gtctatgtca gtaatggcag gctctaaaat  250
cagtggcggc gccgctgggt cctgaacgta gtaatatttc ttgtcaccgt  300
ttctaggtgt gcttctgtct atacccaaat tcttctatgg ttgacctcgg  350
atcaggtagg gatacccgct gaacttaagc atatcaataa gcggaggaaa  400
agcacgccgt ctagaagcac gatcagaggc tgaatacta              439

<210> 155
<211> 333
<212> DNA
<213> Artificial Sequence

<220> 
<223> Internal reference sequence for use with the rDNA domain
      in prokaryotes

<400> 155
tactattcag cctctgtacg tgcttcatgt aaattgacac actggaactg   50
agacacggtc cagactccat cgggagcgag catgggggaa tattgcacaa  100
tgggcgcaag cctgatggac cctagccgcc actatgaaga aggccttcgg  150
gttgtaaagt actttcagcg gggaggaggg aatgaaagta tatacctttc  200
gtcatgtacg ttactcgcag aagaagcacc ggctaactcc gtgccagcag  250
ccgcggtaat acggagggtg caagcgttaa tcggaattac tgggcgcacg  300
ccgtctagaa gcacgatcag aggctgaata cta                    333

<210> 156
<211> 333
<212> DNA
<213> Artificial Sequence

<220> 
<223> Internal reference sequence for use with the rDNA domain
      in prokaryotes.

<400> 156
tactattcag cctctgtacg tgcttcatgt aaattgacac actggaactg   50
agacacggtc cagactcctg caggagacgg cagtggggaa tattgcacaa  100
tgggcgcaag cctgatgtat ccctgacgca gatatgaaga aggccttcgg  150
gttgtaaagt actttcagcg gggaggaagg tcgtaaaact aatacacttg  200
ctgtttgaac ttacccagag aagaagcacc ggctaactcc gtgccagcag  250
ccgcggtaat acggagggtg caagcgttaa tcggaattac tgggcgcacg  300
ccgtctagaa gcacgatcag aggctgaata cta                    333

<210> 157
<211> 333
<212> DNA
<213> Artificial Sequence

<220> 
<223> Internal reference sequence for use with the rDNA domain
      in prokaryotes

<400> 157
tactattcag cctctgtacg tgcttcatgt aaattgacac actggaactg   50
agacacggtc cagactccta gcggagcgag cagtggggaa tattgcacaa  100
tgggcgcaag cctgatgacg ccagtccgct ggtatgaaga aggccttcgg  150
gttgtaaagt actttcagcg gggaggaagg aggtaaatgt aatactcttg  200
ctacttgagc ttaccccgag aagaagcacc ggctaactcc gtgccagcag  250
ccgcggtaat acggagggtg caagcgttaa tcggaattac tgggcgcacg  300
ccgtctagaa gcacgatcag aggctgaata cta                    333