							

							PCT/GB2019/050658 - 07-08-2019


                         SEQUENCE LISTING

<110>  Oxford University Innovation Limited
 
<120>  Control of Plastid Associated Protein Degradation II

<130>  P254450WO

<150>  GB 1803834.9
<151>  2018-03-09

<150>  GB 1815206.6
<151>  2018-09-18

<160>  72    

<170>  PatentIn version 3.5

<210>  1
<211>  3149
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Full length genomic sequence of SP2 At3g44160

<400>  1
aaaaatatcc aaagcatcaa atccttaacc tctctgctaa ttcattcact cctgaagaag       60

aagaaagaag aaataagtaa ataaaaattc ctcctttttc tggtcattgc ttgtctaatg      120

ccaattccta aattgggttc tcttcatggt tgattcttct ctcattccat cgccatggga      180

gctcagaaga gtatccacgc tggtagaggt catcactctt atcttagatt ctcgattttt      240

cgaattttgt gttgttgctg gatcagtagg taatgtgata ctgtgctgga aatggtacga      300

ttctggaatt tgattgtgga tttaacctta accaatggag ggctttgctt tgtttccatt      360

tttcttctat tatcttacat tcattttcaa tgtataagat atgattcatt tcatttgtat      420

agttatgatg atgtttatgt ttgtggtaat tgatgaatta gaatgtttta ggcatgagta      480

cacattgttt tttttggtaa aagaaacatt tttctaagac ttttgttacc aaccattatg      540

tgtgatacgt cttgcttttg ggttttgtga aagattggtt ttgatatgtg gatttcctaa      600

atgtcttttt ggggaaaagt atcgattttg atctgaatgt tgtaactttt tctgtatctt      660

tttgttacta actcatcatg tcgaatatgt ctttctgttg aatatagtga aagattaaga      720

tcggactggt ttgcaattgc aatgtagttt tctagcagcg gcattgattt tgatattctt      780

gtgttgttga ttgcagccaa gattgatgtt aatgtggact tcactcacaa gctttgtact      840

tctttaatgt ttcctgcttt caggtttgct ctcatcatcc atactttgac gtcacttaca      900

ttttagctaa tactcatgaa actgtaccgc ctttagcttt ctcgacgtat taaagctcag      960

tttgttactt tttgaacagg gacactagca gtcctctttc tctagtgatt ggcaggcaag     1020

tttcgagact taatgctaca gcttacagaa atattgttgg tgttcatata atctgcagaa     1080

ctaaattttc atatctttct tttcgattca agtgttcatt tggatctgtt tgttgcagcc     1140

tctgtatcaa acatccaaat ttgtttggag gaagcgagaa gcttgatgta tcatgggata     1200

aaggattgta tgattccaat gtacttgtgg cttttaggag acctagacct gaatggcgtc     1260

cacaacagtg tttcttcata caggtactca atgcttattt gttattgtac tgatctgtga     1320

agctatctta gaaagtgaat tttaaagcta tgttacattt aaatttgtta atctggcgca     1380

gcattctctc tcacccgaga taggggtcca cggcacccca gtcgacaact tttctcggtc     1440

aggaagtgga ggtgtaaatc tgtctaaatt ggctcttggt ttagacttga gtgagccagc     1500

gagttcaaaa tggagcagca caaccagcat aaagtttgag gtgcccgcac attaccttct     1560

tcagacattg tagaacaata tttttctctt tgctgttttg ctttggtata aaagagtaat     1620

attttccatt ggtgcagcat gtgcgtccga ttaacgatga tggacgcgcg ataaccagag     1680

atctggacgg atttcctata acatgcaggt gatattagat ctcgattccc ttaatttgtt     1740

tctttaagta ctagcataaa actgatattt acatgtgtag aattctctgc tatgcagtgg     1800

aaatacccat gacagtatgg tagttttaaa gcaagaatcc cggtttgcaa aggctaccga     1860

ccaaggtctt tctcatgtaa gagactcttc atttctgttt tatagcctag gcaaaccaca     1920

cagccatttt tgcagtaact ttgtcaacgt ttcttttctt tcatactggt ttcttgcttt     1980

ttcagtttag catgcaaata gaacaaggta ttccggttgt gtccaagtgg cttatcttca     2040

accgtttcaa atttgttgca tcaaaaggtg tcaggtttgg accggctttt ctcttagcaa     2100

ggtactgaca gaatcgtaca cacttgatct agaaaactac acgtagaaga tgctttgtaa     2160

agatgtccta gttttgccgt ggttcttacc tcttctgtga cagcttgaca ggtggttcaa     2220

ttgtaggaga catggcacct tatcaagcat ttgccattgg tgggctaggc agtgttcgcg     2280

gatatggtga gggtgctgtt ggatccggtc ggtcatgcct tgttgccaat acagaattgg     2340

cgttaccttt ggtacgtgga gctgttgcat gatttggtca tcagaaccat taaatggttt     2400

cccctgttaa gctttcattg agctttggtg tctttttgtg tacagaacaa gatgacagaa     2460

gggaccatct tcttggattg tggaacagac ctaggctcaa gccgccttgt ccccggtaag     2520

ttcactttac cttctccgaa caagaatcat aaagaagttg agacacaaaa atgataaagc     2580

tgttgcggaa ttggtttcag gaaacccttc aatgagacaa gggaagccag ggtttgggta     2640

tggattcgga tatgggctac ggttcaagtc tccattgggt caccttcagg ttgactatgc     2700

cataaatgct ttcaaccaga agactcttta cttcggtgtc accaatcttg cttcatcaac     2760

atagtcaaat agaataaagc aatcaagaaa agcacatatt caatgtcttg attcaaagat     2820

atatttgtgt ttgcgttgga accagaaacg ccacaagatg aggcaaacac agtccaagga     2880

gaagctgtat atgacagaga tcttgagaag ataaatgtag tgttgtcatt agaaatcatg     2940

taatattaca cgggtataag ttttcattgt tttggtatat acagctacca gagttttgtc     3000

tgaaaagctg caggtttcat agagaagaga acacacattt gatttgatgg tgttgcactg     3060

ttgcgaatta gtatctattg cttttacatt tgtacgtata tctatggctc gactctcgac     3120

taactctgaa tacaagtagt ggttgaacc                                       3149


<210>  2
<211>  1648
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Full-length cDNA sequence of SP2

<400>  2
aaaaatatcc aaagcatcaa atccttaacc tctctgctaa ttcattcact cctgaagaag       60

aagaaagaag aaataagtaa ataaaaattc ctcctttttc tggtcattgc ttgtctaatg      120

ccaattccta aattgggttc tcttcatggt tgattcttct ctcattccat cgccatggga      180

gctcagaaga gtatccacgc tggtagagcc aagattgatg ttaatgtgga cttcactcac      240

aagctttgta cttctttaat gtttcctgct ttcagggaca ctagcagtcc tctttctcta      300

gtgattggca gcctctgtat caaacatcca aatttgtttg gaggaagcga gaagcttgat      360

gtatcatggg ataaaggatt gtatgattcc aatgtacttg tggcttttag gagacctaga      420

cctgaatggc gtccacaaca gtgtttcttc atacagcatt ctctctcacc cgagataggg      480

gtccacggca ccccagtcga caacttttct cggtcaggaa gtggaggtgt aaatctgtct      540

aaattggctc ttggtttaga cttgagtgag ccagcgagtt caaaatggag cagcacaacc      600

agcataaagt ttgagcatgt gcgtccgatt aacgatgatg gacgcgcgat aaccagagat      660

ctggacggat ttcctataac atgcagtgga aatacccatg acagtatggt agttttaaag      720

caagaatccc ggtttgcaaa ggctaccgac caaggtcttt ctcattttag catgcaaata      780

gaacaaggta ttccggttgt gtccaagtgg cttatcttca accgtttcaa atttgttgca      840

tcaaaaggtg tcaggtttgg accggctttt ctcttagcaa gcttgacagg tggttcaatt      900

gtaggagaca tggcacctta tcaagcattt gccattggtg ggctaggcag tgttcgcgga      960

tatggtgagg gtgctgttgg atccggtcgg tcatgccttg ttgccaatac agaattggcg     1020

ttacctttga acaagatgac agaagggacc atcttcttgg attgtggaac agacctaggc     1080

tcaagccgcc ttgtccccgg aaacccttca atgagacaag ggaagccagg gtttgggtat     1140

ggattcggat atgggctacg gttcaagtct ccattgggtc accttcaggt tgactatgcc     1200

ataaatgctt tcaaccagaa gactctttac ttcggtgtca ccaatcttgc ttcatcaaca     1260

tagtcaaata gaataaagca atcaagaaaa gcacatattc aatgtcttga ttcaaagata     1320

tatttgtgtt tgcgttggaa ccagaaacgc cacaagatga ggcaaacaca gtccaaggag     1380

aagctgtata tgacagagat cttgagaaga taaatgtagt gttgtcatta gaaatcatgt     1440

aatattacac gggtataagt tttcattgtt ttggtatata cagctaccag agttttgtct     1500

gaaaagctgc aggtttcata gagaagagaa cacacatttg atttgatggt gttgcactgt     1560

tgcgaattag tatctattgc ttttacattt gtacgtatat ctatggctcg actctcgact     1620

aactctgaat acaagtagtg gttgaacc                                        1648


<210>  3
<211>  362
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  SP2 protein

<400>  3

Met Gly Ala Gln Lys Ser Ile His Ala Gly Arg Ala Lys Ile Asp Val 
1               5                   10                  15      


Asn Val Asp Phe Thr His Lys Leu Cys Thr Ser Leu Met Phe Pro Ala 
            20                  25                  30          


Phe Arg Asp Thr Ser Ser Pro Leu Ser Leu Val Ile Gly Ser Leu Cys 
        35                  40                  45              


Ile Lys His Pro Asn Leu Phe Gly Gly Ser Glu Lys Leu Asp Val Ser 
    50                  55                  60                  


Trp Asp Lys Gly Leu Tyr Asp Ser Asn Val Leu Val Ala Phe Arg Arg 
65                  70                  75                  80  


Pro Arg Pro Glu Trp Arg Pro Gln Gln Cys Phe Phe Ile Gln His Ser 
                85                  90                  95      


Leu Ser Pro Glu Ile Gly Val His Gly Thr Pro Val Asp Asn Phe Ser 
            100                 105                 110         


Arg Ser Gly Ser Gly Gly Val Asn Leu Ser Lys Leu Ala Leu Gly Leu 
        115                 120                 125             


Asp Leu Ser Glu Pro Ala Ser Ser Lys Trp Ser Ser Thr Thr Ser Ile 
    130                 135                 140                 


Lys Phe Glu His Val Arg Pro Ile Asn Asp Asp Gly Arg Ala Ile Thr 
145                 150                 155                 160 


Arg Asp Leu Asp Gly Phe Pro Ile Thr Cys Ser Gly Asn Thr His Asp 
                165                 170                 175     


Ser Met Val Val Leu Lys Gln Glu Ser Arg Phe Ala Lys Ala Thr Asp 
            180                 185                 190         


Gln Gly Leu Ser His Phe Ser Met Gln Ile Glu Gln Gly Ile Pro Val 
        195                 200                 205             


Val Ser Lys Trp Leu Ile Phe Asn Arg Phe Lys Phe Val Ala Ser Lys 
    210                 215                 220                 


Gly Val Arg Phe Gly Pro Ala Phe Leu Leu Ala Ser Leu Thr Gly Gly 
225                 230                 235                 240 


Ser Ile Val Gly Asp Met Ala Pro Tyr Gln Ala Phe Ala Ile Gly Gly 
                245                 250                 255     


Leu Gly Ser Val Arg Gly Tyr Gly Glu Gly Ala Val Gly Ser Gly Arg 
            260                 265                 270         


Ser Cys Leu Val Ala Asn Thr Glu Leu Ala Leu Pro Leu Asn Lys Met 
        275                 280                 285             


Thr Glu Gly Thr Ile Phe Leu Asp Cys Gly Thr Asp Leu Gly Ser Ser 
    290                 295                 300                 


Arg Leu Val Pro Gly Asn Pro Ser Met Arg Gln Gly Lys Pro Gly Phe 
305                 310                 315                 320 


Gly Tyr Gly Phe Gly Tyr Gly Leu Arg Phe Lys Ser Pro Leu Gly His 
                325                 330                 335     


Leu Gln Val Asp Tyr Ala Ile Asn Ala Phe Asn Gln Lys Thr Leu Tyr 
            340                 345                 350         


Phe Gly Val Thr Asn Leu Ala Ser Ser Thr 
        355                 360         


<210>  4
<211>  2031
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Full length genomic sequence of SP1 At1g63900

<400>  4
atgattcctt ggggtggagt tacttgctgc ctcagcgccg ctgctcttta tcttctcggc       60

cggagtagtg gcaggtttgt ctgatctctt ttatatttca tcttcccaaa gagattatca      120

atcaatcaaa tcctttctta tccttttgag tgcagggatg ctgaagtact cgaaacagtc      180

actagggtta atcagctcaa ggagttaggt aatcttcttc tcccctgatt gcttcatcta      240

ctctcaggat gaagttttga tcatgttttc tgattgttct gtatgtgtag ctcaattgct      300

agaattagat agcaagattc tgcctttcat tgttgcggta tcaggaagag tcggctctga      360

gacacctatc aaatgcgagc atagtggcat acgcggtgtt attgttgaag aaacggtatg      420

ttgtagactg atgattagcg catggaactt agtttgtttt ctggtttaat cgattaggtt      480

ttatgtgaaa ctctagtaat tgcatgatct tttcaggcgg aacaacattt cctgaaacat      540

aatgagacgg gttcttgggt acaagatagt gcgttgatgc tatcaatgag caaagaggtt      600

ccttggtttc tggtaagtct agtctagtag catagtgttt gaaacaactg tgattggatg      660

ttttcttaat accatttcca aaactgtttg ggataggacg atgggacaag ccgtgtccat      720

gtaatgggag ctcgtggtgc gacgggtttt gccttgactg ttggtagtga agtttttgaa      780

gagtcaggac gctcgcttgt acgaggaaca cttgattatc ttcaaggact taaggttttt      840

acttttcttt ccggttcttt gtttgttggc ttctctattt gcttaagcgg ccattgtttt      900

gtttcagatg cttggagtta agcgcattga gcgtgttctt ccaactggaa taccgctaac      960

aattgttggt gaggtatgtc gtattctcag tgttttcggg tcctctcttt tgcttaagtt     1020

gtaactgttg atagagatac atagcacact aactccttca tcagtctggt atttgcctct     1080

tgaaattttc tcaaagttcc tttaatagca atatttgtag gaagtgggat tgatctatgt     1140

atagaggctt accgatgagt ttaaatctaa tttgtgttgc tgccatgtat aacaggctgt     1200

caaggacgat attggagaat tcaggattca aaaacctgac aggggccctt tctacgtctc     1260

ttctaaatca ctcgatcagc tcatttctaa tttgggaaaa tggtcaaggt cgtgtctctc     1320

tcctctctcg gttcttctcc tatactcttg tagaaaaacg gcaatgagcc aaactgattg     1380

agaagagtat aatttacagg ttgtacaaat atgcctccat gggttttact gttcttggtg     1440

tgttcctaat tacgaagcat gtcattgact ctgttctaga gagaagacgg cggagacagt     1500

tacaaaaaag gtatgtcaca gatttgtctg tctaaaagtg aataaccgtt ctcaagcatg     1560

agtactagat cggcttgttt ctctcgaaac tatgtacaca caaaattaag tagtcagctg     1620

tttttgcaga gtgcttgacg cagcagcaaa gagagctgag ctagagagtg aaggtatcca     1680

ttggtgaatc tctttattct acatataggt tgcactggct ctgactacaa tctcttctga     1740

ccaggttcaa acgggacacg tgagagcatt tcagattcta ccaagaaaga agacgctgtt     1800

cctgatctct gtgtgatatg cctagagcag gagtacaacg ctgtgtttgt cccgtaagca     1860

ttcttccgcc atttttggtt gattctgcat ttgcaacttg ctaaaatgct tgtggttggt     1920

actcgcaggt gtggtcatat gtgctgctgc accgcatgct cctcccactt gaccagctgt     1980

ccactttgtc ggagacgaat agatctggcg gttaagacat atcgtcactg a              2031


<210>  5
<211>  1584
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Full-length cDNA sequence of SP1

<400>  5
atgagaatat tgagagagat cgaagcaaag gatcattcaa ttccaaccct ctgaatcttt       60

taatttcccc tttcgaaatt ctcctcttct ttcactgctt ctagtttcta attcttcaaa      120

ctcttcctcg attcatactc ataactctca ttagctaatt tcgcatgatc ttcttccatc      180

tctctgtgtt ctaaatccag attcgtttca ctcccatctc tatttcattc aattcgctgc      240

atccagattc aaaacctacc tctatctctc tgctcatcaa taacttcaaa ggtattgttg      300

ttcttctgca aacaagtaag agtgacttca gagtctgatg attccttggg gtggagttac      360

ttgctgcctc agcgccgctg ctctttatct tctcggccgg agtagtggca gggatgctga      420

agtactcgaa acagtcacta gggttaatca gctcaaggag ttagctcaat tgctagaatt      480

agatagcaag attctgcctt tcattgttgc ggtatcagga agagtcggct ctgagacacc      540

tatcaaatgc gagcatagtg gcatacgcgg tgttattgtt gaagaaacgg cggaacaaca      600

tttcctgaaa cataatgaga cgggttcttg ggtacaagat agtgcgttga tgctatcaat      660

gagcaaagag gttccttggt ttctggacga tgggacaagc cgtgtccatg taatgggagc      720

tcgtggtgcg acgggttttg ccttgactgt tggtagtgaa gtttttgaag agtcaggacg      780

ctcgcttgta cgaggaacac ttgattatct tcaaggactt aagatgcttg gagttaagcg      840

cattgagcgt gttcttccaa ctggaatacc gctaacaatt gttggtgagg ctgtcaagga      900

cgatattgga gaattcagga ttcaaaaacc tgacaggggc cctttctacg tctcttctaa      960

atcactcgat cagctcattt ctaatttggg aaaatggtca aggttgtaca aatatgcctc     1020

catgggtttt actgttcttg gtgtgttcct aattacgaag catgtcattg actctgttct     1080

agagagaaga cggcggagac agttacaaaa aagagtgctt gacgcagcag caaagagagc     1140

tgagctagag agtgaaggtt caaacgggac acgtgagagc atttcagatt ctaccaagaa     1200

agaagacgct gttcctgatc tctgtgtgat atgcctagag caggagtaca acgctgtgtt     1260

tgtcccgtgt ggtcatatgt gctgctgcac cgcatgctcc tcccacttga ccagctgtcc     1320

actttgtcgg agacgaatag atctggcggt taagacatat cgtcactgaa caacaactca     1380

ggcctcagaa acattctcta cttgagtctt gtctgtaaat accgcaaaat caaaacatta     1440

cacagtttag cgttcgatat tccctttggt ttgatttcga caacaaaaca ttttgaatta     1500

tatagaaaca taaggtgttt actcgatttg caaaacagta cattcgtgtt tacttattcg     1560

tgttgttgcc aatgccatga ggtg                                            1584


<210>  6
<211>  343
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  SP1 protein

<400>  6

Met Ile Pro Trp Gly Gly Val Thr Cys Cys Leu Ser Ala Ala Ala Leu 
1               5                   10                  15      


Tyr Leu Leu Gly Arg Ser Ser Gly Arg Asp Ala Glu Val Leu Glu Thr 
            20                  25                  30          


Val Thr Arg Val Asn Gln Leu Lys Glu Leu Ala Gln Leu Leu Glu Leu 
        35                  40                  45              


Asp Ser Lys Ile Leu Pro Phe Ile Val Ala Val Ser Gly Arg Val Gly 
    50                  55                  60                  


Ser Glu Thr Pro Ile Lys Cys Glu His Ser Gly Ile Arg Gly Val Ile 
65                  70                  75                  80  


Val Glu Glu Thr Ala Glu Gln His Phe Leu Lys His Asn Glu Thr Gly 
                85                  90                  95      


Ser Trp Val Gln Asp Ser Ala Leu Met Leu Ser Met Ser Lys Glu Val 
            100                 105                 110         


Pro Trp Phe Leu Asp Asp Gly Thr Ser Arg Val His Val Met Gly Ala 
        115                 120                 125             


Arg Gly Ala Thr Gly Phe Ala Leu Thr Val Gly Ser Glu Val Phe Glu 
    130                 135                 140                 


Glu Ser Gly Arg Ser Leu Val Arg Gly Thr Leu Asp Tyr Leu Gln Gly 
145                 150                 155                 160 


Leu Lys Met Leu Gly Val Lys Arg Ile Glu Arg Val Leu Pro Thr Gly 
                165                 170                 175     


Ile Pro Leu Thr Ile Val Gly Glu Ala Val Lys Asp Asp Ile Gly Glu 
            180                 185                 190         


Phe Arg Ile Gln Lys Pro Asp Arg Gly Pro Phe Tyr Val Ser Ser Lys 
        195                 200                 205             


Ser Leu Asp Gln Leu Ile Ser Asn Leu Gly Lys Trp Ser Arg Leu Tyr 
    210                 215                 220                 


Lys Tyr Ala Ser Met Gly Phe Thr Val Leu Gly Val Phe Leu Ile Thr 
225                 230                 235                 240 


Lys His Val Ile Asp Ser Val Leu Glu Arg Arg Arg Arg Arg Gln Leu 
                245                 250                 255     


Gln Lys Arg Val Leu Asp Ala Ala Ala Lys Arg Ala Glu Leu Glu Ser 
            260                 265                 270         


Glu Gly Ser Asn Gly Thr Arg Glu Ser Ile Ser Asp Ser Thr Lys Lys 
        275                 280                 285             


Glu Asp Ala Val Pro Asp Leu Cys Val Ile Cys Leu Glu Gln Glu Tyr 
    290                 295                 300                 


Asn Ala Val Phe Val Pro Cys Gly His Met Cys Cys Cys Thr Ala Cys 
305                 310                 315                 320 


Ser Ser His Leu Thr Ser Cys Pro Leu Cys Arg Arg Arg Ile Asp Leu 
                325                 330                 335     


Ala Val Lys Thr Tyr Arg His 
            340             


<210>  7
<211>  3804
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  full length genomic sequence of CDC48 At3g09840

<400>  7
gtcggtttga tattactaga agataagaaa caaaaaggaa aataagaata aaggaaaaaa       60

aaagagctct cttttccaac aagaaacgta gagagatata attagagaaa atctgtgctc      120

tttcagatcc cattatcaca aatccatctc tctctctctc tcagagaaga aaccaaagaa      180

gaagaaaaag ctctcaactt tcttcgattt ctcagggaac tctttcgtta atctcaaact      240

caatcatgtc taccccagct gaatcttcag actcgtaagt acccagatct ctgattttgg      300

ttttccgatc gggatttttt tcggatcttc ttaaagtctg ggtttttcga ttttggggat      360

tagggttttg gttgatcttg tgtttctata gttgaatctt aatcttcttt gttgttgtta      420

caggaaatcg aagaaagatt tcagtactgc tattctcgag aggaagaagt ctccgaaccg      480

tctcgtcgtc gatgaggcta tcaacgatga taactccgtc gtctctcttc accctgcaac      540

catggagaag cttcagctct tccgtggtga taccattctc atcaaggttt gggtttgctt      600

ttgtttgttt ggattctctt ttgattgaga tattgaatgg ttggtttctg tctctatgaa      660

gagacataat ttagggtttt ttctccttgc ttgattaatg gattcttatg tggttctaca      720

taaactaggg tttgtggtct tttgaaacaa gtgatttatg atcttaggta ttatacaaaa      780

taaaaagact tgcttttgta ctgatcctgt cttggtgaat gattcgtatt agtagtcttt      840

atgagttctt atttggtttg gattttggct ttcagggtaa gaagaggaag gacactgtct      900

gcattgctct tgctgatgag acatgtgagg agccaaagat cagaatgaat aaagtagtca      960

gatctaactt gagggttaga ctgggagatg ttatatctgt tcaccaatgc ccagacgtca     1020

agtacggaaa gcgtgttcac atcctgcctg ttgatgatac tgttgaagga gtgactggaa     1080

acctatttga tgcttacctg aaacgtaagt tgcctttttg ttttagatcc ttatccagtt     1140

atgcaatttt gatttttctt tggatgttct tgtttggttt gagatattat tagagtgatt     1200

tcttaacaaa gattgaattc ttttcaacag cttatttcct tgaggcatac cgtccagtga     1260

ggaagggtga tctcttccta gtcagaggag gaatgaggag tgtggagttc aaagttatag     1320

agacagatcc tgctgagtac tgcgtggttg ctccagacac agagattttc tgtgagggtg     1380

agcctgtgaa gagagaggat gaagaaaggc tagatgatgt aggttatgat gatgttggtg     1440

gtgtcaggaa acagatggct cagattaggg aacttgttga acttcccttg aggcatccac     1500

agctattcaa gtcgattggt gttaagccac cgaagggaat tcttctttat ggaccacctg     1560

ggtctggaaa gactttgatc gctcgtgctg tggctaatga aacgggtgcc tttttcttct     1620

gtatcaacgg acctgagatc atgtccaaat tggctggtga gagtgagagc aacctcagga     1680

aagcattcga ggaggctgag aaaaatgcgc cttcaatcat attcattgat gagatcgact     1740

ctattgcacc gaaaagagag aagactaatg gagaggttga gaggaggatt gtctctcagc     1800

tccttacgct aatggatgga ctgaaatctc gtgctcatgt tatcgtcatg ggagcaacca     1860

atcgccccaa cagtatcgac ccagctttga gaaggtttgg aagatttgac agggagatcg     1920

atattggagt tcctgacgaa attggacgtc ttgaagttct gaggatccat acaaagaaca     1980

tgaagctggc tgaagatgta attttctagt catagctttt tctgtgtttg ttgagtgtaa     2040

tgtttattga atgctaaatt cttcttgtgg ttgttttcca ggtggatctc gaaaggatct     2100

caaaggacac acacggttac gtcggtgctg atcttgcagc tttgtgcaca gaggccgccc     2160

tgcaatgcat cagggagaag atggatgtga ttgatctgga agatgactcc atagacgctg     2220

aaatcctcaa ttccatggca gtcactaatg aacatttcca cactgctctc gggaacagca     2280

acccatctgc acttcgtgaa actgtgagta ttgacagtac tctgcttaga acgagatcaa     2340

agattgtatc tttgcgtaaa tctcattcca aattttcttc tttgctttgc aggttgtgga     2400

ggttcccaac gtctcttgga atgatattgg aggtcttgag aatgtcaaga gagagctcca     2460

ggaggtaaat tgctaatatt tacttttgct tgggtctgtc tattaattgt aatttgtaac     2520

ctgagccgtg tgattgttca aatgcagact gttcaatacc cagtcgagca cccagagaag     2580

tttgagaaat tcgggatgtc tccatcaaag ggagtccttt tctacggtcc tcctggatgt     2640

gggaaaaccc ttttggccaa agctattgcc aacgagtgcc aagctaattt catcagtgtc     2700

aagggtcccg agcttctgac aatgtggttt ggagagagtg aagcaaatgt tcgtgaaatc     2760

ttcgacaagg cccgtcaatc cgctccatgt gttcttttct ttgatgagct cgactccatt     2820

gcaactcaga gaggaggtgg aagtggtggc gatggaggtg gtgctgcgga cagagtcttg     2880

aaccagcttt tgactgagat ggacggaatg aatgccaaga aaaccgtctt catcatcgga     2940

gctaccaaca gacctgacat tatcgattca gctcttctcc gtcctggaag gcttgaccag     3000

ctcatttaca ttccactacc agatgaggat tcccgtctca atatcttcaa ggccgccttg     3060

aggaaatctc ctattgctaa agatgtagac atcggtgcac ttgctaaata cactcagggt     3120

ttcagtggtg ctgatatcac tgagatttgc cagagagctt gcaagtacgc catcagagaa     3180

aacattgaga aggttagaga tcccatcgcc aagctcttta tccaaagatt gttatactct     3240

ccaatcgttg aactgaagct catgtttttt ttttgtttca ggacattgaa aaggagaaga     3300

ggaggagcga gaacccagag gcaatggagg aagatggagt ggatgaagta tcagagatca     3360

aagctgcaca ctttgaggag tcgatgaagt atgcgcgtag gagtgtgagt gatgcagaca     3420

tcaggaagta ccaagccttt gctcagacgt tgcagcagtc tagagggttc ggttctgagt     3480

tcaggttcga gaattctgct ggttcaggtg ccaccactgg agtcgcagat ccgtttgcca     3540

cgtctgcagc cgctgctggg gacgatgatg atctctacaa ttagtgataa cttctttatc     3600

cttttttttt ttaagtttta aaactcgaat tctctacttt tggattactg gggaaagtga     3660

tactgattct ttcctcgtgt ttttaagtta tccgaatctc ttgtgtttgg gttttaatca     3720

atgttcttaa ttttcgtttc aatacttgtt tggtcgttca ttacaaatgg aaaaaataaa     3780

ggattataaa gtaagttaaa aaga                                            3804


<210>  8
<211>  2895
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  full-length cDNA sequence of CDC48

<400>  8
gtcggtttga tattactaga agataagaaa caaaaaggaa aataagaata aaggaaaaaa       60

aaagagctct cttttccaac aagaaacgta gagagatata attagagaaa atctgtgctc      120

tttcagatcc cattatcaca aatccatctc tctctctctc tcagagaaga aaccaaagaa      180

gaagaaaaag ctctcaactt tcttcgattt ctcagggaac tctttcgtta atctcaaact      240

caatcatgtc taccccagct gaatcttcag actcgaaatc gaagaaagat ttcagtactg      300

ctattctcga gaggaagaag tctccgaacc gtctcgtcgt cgatgaggct atcaacgatg      360

ataactccgt cgtctctctt caccctgcaa ccatggagaa gcttcagctc ttccgtggtg      420

ataccattct catcaagggt aagaagagga aggacactgt ctgcattgct cttgctgatg      480

agacatgtga ggagccaaag atcagaatga ataaagtagt cagatctaac ttgagggtta      540

gactgggaga tgttatatct gttcaccaat gcccagacgt caagtacgga aagcgtgttc      600

acatcctgcc tgttgatgat actgttgaag gagtgactgg aaacctattt gatgcttacc      660

tgaaacctta tttccttgag gcataccgtc cagtgaggaa gggtgatctc ttcctagtca      720

gaggaggaat gaggagtgtg gagttcaaag ttatagagac agatcctgct gagtactgcg      780

tggttgctcc agacacagag attttctgtg agggtgagcc tgtgaagaga gaggatgaag      840

aaaggctaga tgatgtaggt tatgatgatg ttggtggtgt caggaaacag atggctcaga      900

ttagggaact tgttgaactt cccttgaggc atccacagct attcaagtcg attggtgtta      960

agccaccgaa gggaattctt ctttatggac cacctgggtc tggaaagact ttgatcgctc     1020

gtgctgtggc taatgaaacg ggtgcctttt tcttctgtat caacggacct gagatcatgt     1080

ccaaattggc tggtgagagt gagagcaacc tcaggaaagc attcgaggag gctgagaaaa     1140

atgcgccttc aatcatattc attgatgaga tcgactctat tgcaccgaaa agagagaaga     1200

ctaatggaga ggttgagagg aggattgtct ctcagctcct tacgctaatg gatggactga     1260

aatctcgtgc tcatgttatc gtcatgggag caaccaatcg ccccaacagt atcgacccag     1320

ctttgagaag gtttggaaga tttgacaggg agatcgatat tggagttcct gacgaaattg     1380

gacgtcttga agttctgagg atccatacaa agaacatgaa gctggctgaa gatgtggatc     1440

tcgaaaggat ctcaaaggac acacacggtt acgtcggtgc tgatcttgca gctttgtgca     1500

cagaggccgc cctgcaatgc atcagggaga agatggatgt gattgatctg gaagatgact     1560

ccatagacgc tgaaatcctc aattccatgg cagtcactaa tgaacatttc cacactgctc     1620

tcgggaacag caacccatct gcacttcgtg aaactgttgt ggaggttccc aacgtctctt     1680

ggaatgatat tggaggtctt gagaatgtca agagagagct ccaggagact gttcaatacc     1740

cagtcgagca cccagagaag tttgagaaat tcgggatgtc tccatcaaag ggagtccttt     1800

tctacggtcc tcctggatgt gggaaaaccc ttttggccaa agctattgcc aacgagtgcc     1860

aagctaattt catcagtgtc aagggtcccg agcttctgac aatgtggttt ggagagagtg     1920

aagcaaatgt tcgtgaaatc ttcgacaagg cccgtcaatc cgctccatgt gttcttttct     1980

ttgatgagct cgactccatt gcaactcaga gaggaggtgg aagtggtggc gatggaggtg     2040

gtgctgcgga cagagtcttg aaccagcttt tgactgagat ggacggaatg aatgccaaga     2100

aaaccgtctt catcatcgga gctaccaaca gacctgacat tatcgattca gctcttctcc     2160

gtcctggaag gcttgaccag ctcatttaca ttccactacc agatgaggat tcccgtctca     2220

atatcttcaa ggccgccttg aggaaatctc ctattgctaa agatgtagac atcggtgcac     2280

ttgctaaata cactcagggt ttcagtggtg ctgatatcac tgagatttgc cagagagctt     2340

gcaagtacgc catcagagaa aacattgaga aggacattga aaaggagaag aggaggagcg     2400

agaacccaga ggcaatggag gaagatggag tggatgaagt atcagagatc aaagctgcac     2460

actttgagga gtcgatgaag tatgcgcgta ggagtgtgag tgatgcagac atcaggaagt     2520

accaagcctt tgctcagacg ttgcagcagt ctagagggtt cggttctgag ttcaggttcg     2580

agaattctgc tggttcaggt gccaccactg gagtcgcaga tccgtttgcc acgtctgcag     2640

ccgctgctgg ggacgatgat gatctctaca attagtgata acttctttat cctttttttt     2700

tttaagtttt aaaactcgaa ttctctactt ttggattact ggggaaagtg atactgattc     2760

tttcctcgtg tttttaagtt atccgaatct cttgtgtttg ggttttaatc aatgttctta     2820

attttcgttt caatacttgt ttggtcgttc attacaaatg gaaaaaataa aggattataa     2880

agtaagttaa aaaga                                                      2895


<210>  9
<211>  809
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  amino acid sequence of the CDC48 protein

<400>  9

Met Ser Thr Pro Ala Glu Ser Ser Asp Ser Lys Ser Lys Lys Asp Phe 
1               5                   10                  15      


Ser Thr Ala Ile Leu Glu Arg Lys Lys Ser Pro Asn Arg Leu Val Val 
            20                  25                  30          


Asp Glu Ala Ile Asn Asp Asp Asn Ser Val Val Ser Leu His Pro Ala 
        35                  40                  45              


Thr Met Glu Lys Leu Gln Leu Phe Arg Gly Asp Thr Ile Leu Ile Lys 
    50                  55                  60                  


Gly Lys Lys Arg Lys Asp Thr Val Cys Ile Ala Leu Ala Asp Glu Thr 
65                  70                  75                  80  


Cys Glu Glu Pro Lys Ile Arg Met Asn Lys Val Val Arg Ser Asn Leu 
                85                  90                  95      


Arg Val Arg Leu Gly Asp Val Ile Ser Val His Gln Cys Pro Asp Val 
            100                 105                 110         


Lys Tyr Gly Lys Arg Val His Ile Leu Pro Val Asp Asp Thr Val Glu 
        115                 120                 125             


Gly Val Thr Gly Asn Leu Phe Asp Ala Tyr Leu Lys Pro Tyr Phe Leu 
    130                 135                 140                 


Glu Ala Tyr Arg Pro Val Arg Lys Gly Asp Leu Phe Leu Val Arg Gly 
145                 150                 155                 160 


Gly Met Arg Ser Val Glu Phe Lys Val Ile Glu Thr Asp Pro Ala Glu 
                165                 170                 175     


Tyr Cys Val Val Ala Pro Asp Thr Glu Ile Phe Cys Glu Gly Glu Pro 
            180                 185                 190         


Val Lys Arg Glu Asp Glu Glu Arg Leu Asp Asp Val Gly Tyr Asp Asp 
        195                 200                 205             


Val Gly Gly Val Arg Lys Gln Met Ala Gln Ile Arg Glu Leu Val Glu 
    210                 215                 220                 


Leu Pro Leu Arg His Pro Gln Leu Phe Lys Ser Ile Gly Val Lys Pro 
225                 230                 235                 240 


Pro Lys Gly Ile Leu Leu Tyr Gly Pro Pro Gly Ser Gly Lys Thr Leu 
                245                 250                 255     


Ile Ala Arg Ala Val Ala Asn Glu Thr Gly Ala Phe Phe Phe Cys Ile 
            260                 265                 270         


Asn Gly Pro Glu Ile Met Ser Lys Leu Ala Gly Glu Ser Glu Ser Asn 
        275                 280                 285             


Leu Arg Lys Ala Phe Glu Glu Ala Glu Lys Asn Ala Pro Ser Ile Ile 
    290                 295                 300                 


Phe Ile Asp Glu Ile Asp Ser Ile Ala Pro Lys Arg Glu Lys Thr Asn 
305                 310                 315                 320 


Gly Glu Val Glu Arg Arg Ile Val Ser Gln Leu Leu Thr Leu Met Asp 
                325                 330                 335     


Gly Leu Lys Ser Arg Ala His Val Ile Val Met Gly Ala Thr Asn Arg 
            340                 345                 350         


Pro Asn Ser Ile Asp Pro Ala Leu Arg Arg Phe Gly Arg Phe Asp Arg 
        355                 360                 365             


Glu Ile Asp Ile Gly Val Pro Asp Glu Ile Gly Arg Leu Glu Val Leu 
    370                 375                 380                 


Arg Ile His Thr Lys Asn Met Lys Leu Ala Glu Asp Val Asp Leu Glu 
385                 390                 395                 400 


Arg Ile Ser Lys Asp Thr His Gly Tyr Val Gly Ala Asp Leu Ala Ala 
                405                 410                 415     


Leu Cys Thr Glu Ala Ala Leu Gln Cys Ile Arg Glu Lys Met Asp Val 
            420                 425                 430         


Ile Asp Leu Glu Asp Asp Ser Ile Asp Ala Glu Ile Leu Asn Ser Met 
        435                 440                 445             


Ala Val Thr Asn Glu His Phe His Thr Ala Leu Gly Asn Ser Asn Pro 
    450                 455                 460                 


Ser Ala Leu Arg Glu Thr Val Val Glu Val Pro Asn Val Ser Trp Asn 
465                 470                 475                 480 


Asp Ile Gly Gly Leu Glu Asn Val Lys Arg Glu Leu Gln Glu Thr Val 
                485                 490                 495     


Gln Tyr Pro Val Glu His Pro Glu Lys Phe Glu Lys Phe Gly Met Ser 
            500                 505                 510         


Pro Ser Lys Gly Val Leu Phe Tyr Gly Pro Pro Gly Cys Gly Lys Thr 
        515                 520                 525             


Leu Leu Ala Lys Ala Ile Ala Asn Glu Cys Gln Ala Asn Phe Ile Ser 
    530                 535                 540                 


Val Lys Gly Pro Glu Leu Leu Thr Met Trp Phe Gly Glu Ser Glu Ala 
545                 550                 555                 560 


Asn Val Arg Glu Ile Phe Asp Lys Ala Arg Gln Ser Ala Pro Cys Val 
                565                 570                 575     


Leu Phe Phe Asp Glu Leu Asp Ser Ile Ala Thr Gln Arg Gly Gly Gly 
            580                 585                 590         


Ser Gly Gly Asp Gly Gly Gly Ala Ala Asp Arg Val Leu Asn Gln Leu 
        595                 600                 605             


Leu Thr Glu Met Asp Gly Met Asn Ala Lys Lys Thr Val Phe Ile Ile 
    610                 615                 620                 


Gly Ala Thr Asn Arg Pro Asp Ile Ile Asp Ser Ala Leu Leu Arg Pro 
625                 630                 635                 640 


Gly Arg Leu Asp Gln Leu Ile Tyr Ile Pro Leu Pro Asp Glu Asp Ser 
                645                 650                 655     


Arg Leu Asn Ile Phe Lys Ala Ala Leu Arg Lys Ser Pro Ile Ala Lys 
            660                 665                 670         


Asp Val Asp Ile Gly Ala Leu Ala Lys Tyr Thr Gln Gly Phe Ser Gly 
        675                 680                 685             


Ala Asp Ile Thr Glu Ile Cys Gln Arg Ala Cys Lys Tyr Ala Ile Arg 
    690                 695                 700                 


Glu Asn Ile Glu Lys Asp Ile Glu Lys Glu Lys Arg Arg Ser Glu Asn 
705                 710                 715                 720 


Pro Glu Ala Met Glu Glu Asp Gly Val Asp Glu Val Ser Glu Ile Lys 
                725                 730                 735     


Ala Ala His Phe Glu Glu Ser Met Lys Tyr Ala Arg Arg Ser Val Ser 
            740                 745                 750         


Asp Ala Asp Ile Arg Lys Tyr Gln Ala Phe Ala Gln Thr Leu Gln Gln 
        755                 760                 765             


Ser Arg Gly Phe Gly Ser Glu Phe Arg Phe Glu Asn Ser Ala Gly Ser 
    770                 775                 780                 


Gly Ala Thr Thr Gly Val Ala Asp Pro Phe Ala Thr Ser Ala Ala Ala 
785                 790                 795                 800 


Ala Gly Asp Asp Asp Asp Leu Tyr Asn 
                805                 


<210>  10
<211>  2604
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  full length genomic sequence of PUX10 At4g10790.1

<400>  10
atcaaaccat tttactaaag aacacagttt tctagattct ctagagagat aagagtgaga       60

gaagagaaga gaagatccaa aagcgtggga aaatcgaatt agggttttct gaaaatggtt      120

gatactgttg acaaattagg ttacttccaa gcgattacag gtctcgaaga tgctgatttg      180

tgtactgaga tccttcaagc tcatggttgg gacctagaac tagcaatctc ttcattcaca      240

tcttctgatc aagacgcttc gtcttccgcc gtcgatggtg gtggtaacaa tcgcgatcac      300

gatcacaata acgccaccgt gactcctgat tatccacctc gcgggatcgt tgacgataca      360

gagcttgtta tgcgtgatga tggaggagga aatcgaggtc caggagttgc gtggaggatt      420

attactttac cgatttcgat tgtttctggt agcttagggt tagtttctgg agcgatcggg      480

ttaggtattt gggccgctgg tggtgtttta tcgtattctc ttggtatgtt agggtttaga      540

tcagggagag gtggtggttc ggaatcggct cggcttgttt cggtttcttc tgctgttggt      600

gaagcgatgg agtttgttgc tttgtttgat agagattatg ggagtaataa tgcttttaag      660

attgattttg ttgtggaagg atttatggat gcgcttcagc gatctaggag ttcgtttaag      720

ctcttgtttg tttacttgca ttctccggat catcctgata cacctgtgtt ttgtggtgga      780

acgctttgta atgaagccgt tgtagcgttt gttaatgaga attttgtttc ttggggaggt      840

agtattcgat ctagtgaagg gtttaagatg agtaatagct tgaaggcatc gaggttcccg      900

ttttgcgctg tggttatgcc tgctgctaac cagagaattg ctcttcttca gcaggtaaag      960

atacagtctt agattcgaga ggcaatttat caactttagg tagacttggt tatgaatccg     1020

gtaattaaat tgttagtcct cttagggaac tgcattggaa ctgaatccat tctactacct     1080

tgttgttgaa gtggttagta gtaaaggggg aaaggatagt tgtttgattc tgctttcatc     1140

tgtgagccgt catttcatac atttggtgta aagttctgat ccagcttttg tgagtttagt     1200

agtgtgttgt gtggcaggag acgtagttct taagtttatc gttctttgtt ctgtttgttt     1260

gtgacaggtc gagggaccaa aatctccgga agagatgctt gccatactcc agagaattgt     1320

agaagatagc tcacctactt tggtaactgc tagggttgag gcggaggaaa gaagaaccaa     1380

tctgcgtctg agagaggaac aagatgctgc ttaccgtgct gctcttgaag ccgatcaagt     1440

atgttttctg ttctttgtag gcctgttcag aattgacaag actttatgat tagtctactg     1500

tctaaatttg tggcgtcatt tgttctgctg attaggcaag ggagcaacag agacaggagg     1560

agaaagagcg tttagagaga gaagctgctg aggcagagag gaaactcaaa gaagaagaag     1620

aggctcggga gagagcagcg cgtgaagctg aagagagaca agctgctaga gtgcgaatga     1680

gacaagagaa agctcttgct cttggagaag aacctgagaa aggccctgat gttacacaag     1740

taagttcgcc ttcttcctta gccatttatt acttatcttt tctcacacag tttcgtagcc     1800

tatgcaattg caaagaacat taattatctt tattgatatt catttatgag agatactaaa     1860

cttggtgcct cttgaaagtt taggttctat aattgatact ctttgatcaa acgtctgaaa     1920

atttaccttt cgacttggga cggtctgttt tatggtagtc cgtatccgtg aaccgtttat     1980

ctaccctcaa acgtagattt aagtacgggt tcccaaatct tagggcctct ttgatgattt     2040

gattctatgg ttgattctca ttgatcaaac gtcggaaaat ttgcgttatt ttgacttggg     2100

tttatgagaa tgtttgttaa tggtctgatt tattctattt ctgaaccgtt tggtttggcc     2160

tgcaatgtag gtgttagttc ggttcccgaa tggagaaaga aaagggagga tgtttaagag     2220

cgaaaccaag atccagacat tgtatgacta cgtggattca cttggactct tagatacaga     2280

agagtacagc ttaatcacaa acttcccaag gacagtgtat gggagagaca aagagtcaat     2340

gtcactgaaa gacgcaggtt tgcatcctca ggcaagtctc ttcatcgaga tcaactaaaa     2400

ttgctgattc ttctgtttct ttctccttta gcccctcgtt aattttcagt tttttctcta     2460

tttgaaatat atagtttgtt gcttcaatga tacattggac gagatattac atatataata     2520

tacgtacaca tatattcaga agttgcgtca catgtttata tgtttatttc tttaaaaaca     2580

tgaggtttcc aatggtactt cctc                                            2604


<210>  11
<211>  1763
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  full length cDNA sequence of PUX10

<400>  11
atcaaaccat tttactaaag aacacagttt tctagattct ctagagagat aagagtgaga       60

gaagagaaga gaagatccaa aagcgtggga aaatcgaatt agggttttct gaaaatggtt      120

gatactgttg acaaattagg ttacttccaa gcgattacag gtctcgaaga tgctgatttg      180

tgtactgaga tccttcaagc tcatggttgg gacctagaac tagcaatctc ttcattcaca      240

tcttctgatc aagacgcttc gtcttccgcc gtcgatggtg gtggtaacaa tcgcgatcac      300

gatcacaata acgccaccgt gactcctgat tatccacctc gcgggatcgt tgacgataca      360

gagcttgtta tgcgtgatga tggaggagga aatcgaggtc caggagttgc gtggaggatt      420

attactttac cgatttcgat tgtttctggt agcttagggt tagtttctgg agcgatcggg      480

ttaggtattt gggccgctgg tggtgtttta tcgtattctc ttggtatgtt agggtttaga      540

tcagggagag gtggtggttc ggaatcggct cggcttgttt cggtttcttc tgctgttggt      600

gaagcgatgg agtttgttgc tttgtttgat agagattatg ggagtaataa tgcttttaag      660

attgattttg ttgtggaagg atttatggat gcgcttcagc gatctaggag ttcgtttaag      720

ctcttgtttg tttacttgca ttctccggat catcctgata cacctgtgtt ttgtggtgga      780

acgctttgta atgaagccgt tgtagcgttt gttaatgaga attttgtttc ttggggaggt      840

agtattcgat ctagtgaagg gtttaagatg agtaatagct tgaaggcatc gaggttcccg      900

ttttgcgctg tggttatgcc tgctgctaac cagagaattg ctcttcttca gcaggtcgag      960

ggaccaaaat ctccggaaga gatgcttgcc atactccaga gaattgtaga agatagctca     1020

cctactttgg taactgctag ggttgaggcg gaggaaagaa gaaccaatct gcgtctgaga     1080

gaggaacaag atgctgctta ccgtgctgct cttgaagccg atcaagcaag ggagcaacag     1140

agacaggagg agaaagagcg tttagagaga gaagctgctg aggcagagag gaaactcaaa     1200

gaagaagaag aggctcggga gagagcagcg cgtgaagctg aagagagaca agctgctaga     1260

gtgcgaatga gacaagagaa agctcttgct cttggagaag aacctgagaa aggccctgat     1320

gttacacaag tgttagttcg gttcccgaat ggagaaagaa aagggaggat gtttaagagc     1380

gaaaccaaga tccagacatt gtatgactac gtggattcac ttggactctt agatacagaa     1440

gagtacagct taatcacaaa cttcccaagg acagtgtatg ggagagacaa agagtcaatg     1500

tcactgaaag acgcaggttt gcatcctcag gcaagtctct tcatcgagat caactaaaat     1560

tgctgattct tctgtttctt tctcctttag cccctcgtta attttcagtt ttttctctat     1620

ttgaaatata tagtttgttg cttcaatgat acattggacg agatattaca tatataatat     1680

acgtacacat atattcagaa gttgcgtcac atgtttatat gtttatttct ttaaaaacat     1740

gaggtttcca atggtacttc ctc                                             1763


<210>  12
<211>  480
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  amino acid sequence of PUX10

<400>  12

Met Val Asp Thr Val Asp Lys Leu Gly Tyr Phe Gln Ala Ile Thr Gly 
1               5                   10                  15      


Leu Glu Asp Ala Asp Leu Cys Thr Glu Ile Leu Gln Ala His Gly Trp 
            20                  25                  30          


Asp Leu Glu Leu Ala Ile Ser Ser Phe Thr Ser Ser Asp Gln Asp Ala 
        35                  40                  45              


Ser Ser Ser Ala Val Asp Gly Gly Gly Asn Asn Arg Asp His Asp His 
    50                  55                  60                  


Asn Asn Ala Thr Val Thr Pro Asp Tyr Pro Pro Arg Gly Ile Val Asp 
65                  70                  75                  80  


Asp Thr Glu Leu Val Met Arg Asp Asp Gly Gly Gly Asn Arg Gly Pro 
                85                  90                  95      


Gly Val Ala Trp Arg Ile Ile Thr Leu Pro Ile Ser Ile Val Ser Gly 
            100                 105                 110         


Ser Leu Gly Leu Val Ser Gly Ala Ile Gly Leu Gly Ile Trp Ala Ala 
        115                 120                 125             


Gly Gly Val Leu Ser Tyr Ser Leu Gly Met Leu Gly Phe Arg Ser Gly 
    130                 135                 140                 


Arg Gly Gly Gly Ser Glu Ser Ala Arg Leu Val Ser Val Ser Ser Ala 
145                 150                 155                 160 


Val Gly Glu Ala Met Glu Phe Val Ala Leu Phe Asp Arg Asp Tyr Gly 
                165                 170                 175     


Ser Asn Asn Ala Phe Lys Ile Asp Phe Val Val Glu Gly Phe Met Asp 
            180                 185                 190         


Ala Leu Gln Arg Ser Arg Ser Ser Phe Lys Leu Leu Phe Val Tyr Leu 
        195                 200                 205             


His Ser Pro Asp His Pro Asp Thr Pro Val Phe Cys Gly Gly Thr Leu 
    210                 215                 220                 


Cys Asn Glu Ala Val Val Ala Phe Val Asn Glu Asn Phe Val Ser Trp 
225                 230                 235                 240 


Gly Gly Ser Ile Arg Ser Ser Glu Gly Phe Lys Met Ser Asn Ser Leu 
                245                 250                 255     


Lys Ala Ser Arg Phe Pro Phe Cys Ala Val Val Met Pro Ala Ala Asn 
            260                 265                 270         


Gln Arg Ile Ala Leu Leu Gln Gln Val Glu Gly Pro Lys Ser Pro Glu 
        275                 280                 285             


Glu Met Leu Ala Ile Leu Gln Arg Ile Val Glu Asp Ser Ser Pro Thr 
    290                 295                 300                 


Leu Val Thr Ala Arg Val Glu Ala Glu Glu Arg Arg Thr Asn Leu Arg 
305                 310                 315                 320 


Leu Arg Glu Glu Gln Asp Ala Ala Tyr Arg Ala Ala Leu Glu Ala Asp 
                325                 330                 335     


Gln Ala Arg Glu Gln Gln Arg Gln Glu Glu Lys Glu Arg Leu Glu Arg 
            340                 345                 350         


Glu Ala Ala Glu Ala Glu Arg Lys Leu Lys Glu Glu Glu Glu Ala Arg 
        355                 360                 365             


Glu Arg Ala Ala Arg Glu Ala Glu Glu Arg Gln Ala Ala Arg Val Arg 
    370                 375                 380                 


Met Arg Gln Glu Lys Ala Leu Ala Leu Gly Glu Glu Pro Glu Lys Gly 
385                 390                 395                 400 


Pro Asp Val Thr Gln Val Leu Val Arg Phe Pro Asn Gly Glu Arg Lys 
                405                 410                 415     


Gly Arg Met Phe Lys Ser Glu Thr Lys Ile Gln Thr Leu Tyr Asp Tyr 
            420                 425                 430         


Val Asp Ser Leu Gly Leu Leu Asp Thr Glu Glu Tyr Ser Leu Ile Thr 
        435                 440                 445             


Asn Phe Pro Arg Thr Val Tyr Gly Arg Asp Lys Glu Ser Met Ser Leu 
    450                 455                 460                 


Lys Asp Ala Gly Leu His Pro Gln Ala Ser Leu Phe Ile Glu Ile Asn 
465                 470                 475                 480 


<210>  13
<211>  33
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer Toc33-CDS-F

<400>  13
aaaaagcagg ctccatgggg tctctcgttc gtg                                    33


<210>  14
<211>  33
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer Toc33-CDS-R

<400>  14
agaaagctgg gttttaaagt ggctttccac ttg                                    33


<210>  15
<211>  28
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer CDC48-KpnI-F

<400>  15
aaggtaccat gtctacccca gctgaatc                                          28


<210>  16
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer CDC48-ns-XmaI-R

<400>  16
aacccgggat tgtagagatc atcatcgtcc                                        30


<210>  17
<211>  27
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer Toc159-EcoRI-F

<400>  17
aagaattcaa tggactcaaa gtcggtt                                           27


<210>  18
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer Toc159-SalI-R

<400>  18
aagtcgactt agtacatgct gtactt                                            26


<210>  19
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer OEP7-EcoRI-F

<400>  19
aagaattcat gggaaaaact tcggga                                            26


<210>  20
<211>  27
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer OEP7-ns-SalI-F

<400>  20
ttgtcgacac aaaccctctt tggatgt                                           27


<210>  21
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer CDKA1-XhoI-F

<400>  21
ctcgagatgg atcagtacga gaaag                                             25


<210>  22
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer CDKA1-ns-EcoRI-R

<400>  22
gaattcaggc atgcctccaa gatc                                              24


<210>  23
<211>  34
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer SP2-KpnI-F

<400>  23
ggtaccatgt ctttaatgtt tcctgctttc aggg                                   34


<210>  24
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer SP2-R

<400>  24
ctatgttgat gaagcaagat tgg                                               23


<210>  25
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer OEP80-KpnI-F

<400>  25
ggtaccatgc attgtcacaa cgatg                                             25


<210>  26
<211>  18
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer OEP80-R

<400>  26
ttagttccgc agaccaac                                                     18


<210>  27
<211>  28
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer attB1

<400>  27
ggggacaagt ttgtacaaaa agcaggct                                          28


<210>  28
<211>  29
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer attB2

<400>  28
ggggaccact ttgtacaaga aagctgggt                                         29


<210>  29
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer SP2-RT1-F

<400>  29
ggttgtgtcc aagtggctta                                                   20


<210>  30
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer SP2-RT1-R

<400>  30
tacagcttct ccttggactg t                                                 21


<210>  31
<211>  28
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer SP2-RT2-F

<400>  31
gggttctctt catggttgat tcttctct                                          28


<210>  32
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer SP2-RT2-R

<400>  32
ccattcaggt ctaggtctcc taaaa                                             25


<210>  33
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer SP2-F2

<400>  33
ggttgtgtcc aagtggctta                                                   20


<210>  34
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer SP2-R2

<400>  34
ctatgttgat gaagcaagat tggtg                                             25


<210>  35
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer Toc159-QRT-F

<400>  35
aactcttgaa gtggctaata agt                                               23


<210>  36
<211>  18
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer Toc159-QRT-R

<400>  36
acaacctctg gctctaca                                                     18


<210>  37
<211>  18
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer Toc33-QRT-F

<400>  37
aatggtgaag cgtggatc                                                     18


<210>  38
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer Toc33-QRT-R

<400>  38
tgctccttga atcatcttaa cg                                                22


<210>  39
<211>  18
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer Toc75-III-QRT-F

<400>  39
tcgcatctcc actcaatc                                                     18


<210>  40
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer Toc75-III-QRT-R

<400>  40
gtctctgtat ctcggttagg                                                   20


<210>  41
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer GAPDH-F

<400>  41
gtggtggatt tggctcacct                                                   20


<210>  42
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer GAPDH-R

<400>  42
ctcatcagcc gggtttgtct                                                   20


<210>  43
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer SP1-F

<400>  43
ggtacaagat agtgcgttga tg                                                22


<210>  44
<211>  27
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer SP1-R

<400>  44
ctgcagtcag tgacgatatg tcttaac                                           27


<210>  45
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer ACTIN2-F

<400>  45
tcagatgccc agaagtcttg ttcc                                              24


<210>  46
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer ACTIN2-R

<400>  46
ccgtacagat ccttcctgat atcc                                              24


<210>  47
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer eIF4E1-F

<400>  47
aaacaatggc ggtagaagac actc                                              24


<210>  48
<211>  29
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer eIF4E1-R

<400>  48
aagatttgag aggtttcaag cggtgtaag                                         29


<210>  49
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer SP2-dC1-F

<400>  49
tgttgcggaa ttggtttcat                                                   20


<210>  50
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer SP2-dC1-R

<400>  50
ggttgtgtcc aagtggctta                                                   20


<210>  51
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer SP2-dC2-F

<400>  51
cattggtggg ctaggcagtg atc                                               23


<210>  52
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer SP2-dC2-R

<400>  52
catgcaacag ctccacgtac caa                                               23


<210>  53
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer SP2-dC3-F

<400>  53
ccacaatcca agaagatggt ac                                                22


<210>  54
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer SP2-dC3-R

<400>  54
gccttgttgc caatacagaa                                                   20


<210>  55
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer Toc75-III-3-dCAPS-F

<400>  55
gcaaatcaca ggtggatctg                                                   20


<210>  56
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer Toc75-III-3-dCAPS-R

<400>  56
tgcccatgga ggactagaac                                                   20


<210>  57
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer Lba1

<400>  57
tggttcacgt agtgggccat cg                                                22


<210>  58
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer SP2-R3

<400>  58
tacagcttct ccttggactg t                                                 21


<210>  59
<211>  19
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer SP2-F3

<400>  59
cgtggagctg ttgcatgat                                                    19


<210>  60
<211>  39
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  SP2 (At3g44160) gene

<400>  60
tgtctcattg aagggtttcc tgaaaccaat tccgcaaca                              39


<210>  61
<211>  33
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer CDC48-CDS-F

<400>  61
aaaaagcagg ctccatgtct accccagctg aat                                    33


<210>  62
<211>  60
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer CDC48-CDS-R-FLAG

<400>  62
agaaagctgg gttctatttg tcgtcatcgt ctttgtagtc attgtagaga tcatcatcgt       60


<210>  63
<211>  35
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  CDC48-nonstop-R

<400>  63
agaaagctgg gttattgtag agatcatcat cgtcc                                  35


<210>  64
<211>  33
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer CDC48-E581Q-F

<400>  64
ccatgtgttc ttttctttga tcagctcgac tcc                                    33


<210>  65
<211>  33
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer CDC48-E581Q-R

<400>  65
ggagtcgagc tgatcaaaga aaagaacaca tgg                                    33


<210>  66
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer SP1-BamHI-F

<400>  66
ggatccatga ttccttgggg tggag                                             25


<210>  67
<211>  27
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer SP1-ns-NotI-R

<400>  67
gcggccgcgt gacgatatgt cttaacc                                           27


<210>  68
<211>  39
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer SP2-BclI-F

<400>  68
gggttaactc tgatcaatgg gagctcagaa gagtatcca                              39


<210>  69
<211>  40
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer SP2-ns-NotI-R

<400>  69
aaaccggtct gcggccgctg ttgatgaagc aagattggtg                             40


<210>  70
<211>  37
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer SP2-CDS-F

<400>  70
aaaaagcagg ctccatggga gctcagaaga gtatcca                                37


<210>  71
<211>  35
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  primer SP2-CDS-R

<400>  71
agaaagctgg gtttgttgat gaagcaagat tggtg                                  35


<210>  72
<211>  13
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  amino acid sequence of a single representative CDC48 peptide

<400>  72

Ile Val Ser Gln Leu Leu Thr Leu Met Asp Gly Leu Lys 
1               5                   10              


