                               SEQUENCE LISTING

<110> THE HENRY M. JACKSON FOUNDATION FOR THE ADVANCEMENT OF 
      MILITARY MEDICINE, INC.
 
<120> COMPOSITIONS AND METHODS FOR TREATING AUTOIMMUNE DISEASE

<130> 103783-0253

<140> PCT/US2018/067832
<141> 2018-12-28

<150> 62/612,096
<151> 2017-12-29

<160> 56    

<170> PatentIn version 3.5

<210> 1
<211> 21
<212> PRT
<213> Mus musculus

<400> 1
Met Glu Val Gly Trp Tyr Arg Ser Pro Phe Ser Arg Val Val His Leu 
1               5                   10                  15      


Tyr Arg Asn Gly Lys 
            20      


<210> 2
<211> 21
<212> PRT
<213> Homo sapiens

<400> 2
Met Glu Val Gly Trp Tyr Arg Pro Pro Phe Ser Arg Val Val His Leu 
1               5                   10                  15      


Tyr Arg Asn Gly Lys 
            20      


<210> 3
<211> 9
<212> PRT
<213> Homo sapiens

<400> 3
Ser Leu Leu Leu Glu Leu Glu Glu Val 
1               5                   


<210> 4
<211> 9
<212> PRT
<213> Mus musculus

<400> 4
Ser Leu Tyr Leu Asp Leu Glu Glu Val 
1               5                   


<210> 5
<211> 9
<212> PRT
<213> Unknown

<220>
<221> source
<223> /note="Description of Unknown: 
      Mouse or human MAG509-517 sequence"

<400> 5
Leu Met Trp Ala Lys Ile Gly Pro Val 
1               5                   


<210> 6
<211> 9
<212> PRT
<213> Homo sapiens

<400> 6
Val Leu Phe Ser Ser Asp Phe Arg Ile 
1               5                   


<210> 7
<211> 9
<212> PRT
<213> Mus musculus

<400> 7
Val Leu Tyr Ser Pro Glu Phe Arg Ile 
1               5                   


<210> 8
<211> 9
<212> PRT
<213> Homo sapiens

<400> 8
Ser Leu Ser Arg Phe Ser Trp Gly Ala 
1               5                   


<210> 9
<211> 9
<212> PRT
<213> Mus musculus

<400> 9
Ser Leu Ser Arg Phe Ser Trp Gly Gly 
1               5                   


<210> 10
<211> 9
<212> PRT
<213> Unknown

<220>
<221> source
<223> /note="Description of Unknown: 
      mouse or human MOG sequence"

<400> 10
Lys Val Glu Asp Pro Phe Tyr Trp Val 
1               5                   


<210> 11
<211> 9
<212> PRT
<213> Unknown

<220>
<221> source
<223> /note="Description of Unknown: 
      mouse or human MOG sequence"

<400> 11
Arg Thr Phe Asp Pro His Phe Leu Arg 
1               5                   


<210> 12
<211> 9
<212> PRT
<213> Unknown

<220>
<221> source
<223> /note="Description of Unknown: 
      mouse or human MOG sequence"

<400> 12
Phe Leu Arg Val Pro Cys Trp Lys Ile 
1               5                   


<210> 13
<211> 10
<212> PRT
<213> Unknown

<220>
<221> source
<223> /note="Description of Unknown: 
      mouse or human MOG sequence"

<400> 13
Lys Ile Thr Leu Phe Val Ile Val Pro Val 
1               5                   10  


<210> 14
<211> 9
<212> PRT
<213> Unknown

<220>
<221> source
<223> /note="Description of Unknown: 
      mouse or human MOG sequence"

<400> 14
Val Leu Gly Pro Leu Val Ala Leu Ile 
1               5                   


<210> 15
<211> 9
<212> PRT
<213> Unknown

<220>
<221> source
<223> /note="Description of Unknown: 
      mouse or human MOG sequence"

<400> 15
Thr Leu Phe Val Ile Val Pro Val Leu 
1               5                   


<210> 16
<211> 10
<212> PRT
<213> Unknown

<220>
<221> source
<223> /note="Description of Unknown: 
      mouse or human MOG sequence"

<400> 16
Arg Leu Ala Gly Gln Phe Leu Glu Glu Leu 
1               5                   10  


<210> 17
<211> 9
<212> PRT
<213> Unknown

<220>
<221> source
<223> /note="Description of Unknown: 
      mouse or human MOG sequence"

<400> 17
Phe Leu Tyr Gly Ala Leu Leu Leu Ala 
1               5                   


<210> 18
<211> 14
<212> PRT
<213> Unknown

<220>
<221> source
<223> /note="Description of Unknown: 
      MOG sequence"

<400> 18
His Pro Ile Arg Ala Leu Val Gly Asp Glu Val Glu Leu Pro 
1               5                   10                  


<210> 19
<211> 20
<212> PRT
<213> Unknown

<220>
<221> source
<223> /note="Description of Unknown: 
      MOG sequence"

<400> 19
Val Gly Trp Tyr Arg Pro Pro Phe Ser Arg Val Val His Leu Tyr Arg 
1               5                   10                  15      


Asn Gly Lys Asp 
            20  


<210> 20
<211> 26
<212> PRT
<213> Unknown

<220>
<221> source
<223> /note="Description of Unknown: 
      MOG sequence"

<400> 20
Leu Lys Val Glu Asp Pro Phe Tyr Trp Val Ser Pro Gly Val Leu Val 
1               5                   10                  15      


Leu Leu Ala Val Leu Pro Val Leu Leu Leu 
            20                  25      


<210> 21
<211> 110
<212> PRT
<213> Homo sapiens

<400> 21
Met Ala Leu Trp Met Arg Leu Leu Pro Leu Leu Ala Leu Leu Ala Leu 
1               5                   10                  15      


Trp Gly Pro Asp Pro Ala Ala Ala Phe Val Asn Gln His Leu Cys Gly 
            20                  25                  30          


Ser His Leu Val Glu Ala Leu Tyr Leu Val Cys Gly Glu Arg Gly Phe 
        35                  40                  45              


Phe Tyr Thr Pro Lys Thr Arg Arg Glu Ala Glu Asp Leu Gln Val Gly 
    50                  55                  60                  


Gln Val Glu Leu Gly Gly Gly Pro Gly Ala Gly Ser Leu Gln Pro Leu 
65                  70                  75                  80  


Ala Leu Glu Gly Ser Leu Gln Lys Arg Gly Ile Val Glu Gln Cys Cys 
                85                  90                  95      


Thr Ser Ile Cys Ser Leu Tyr Gln Leu Glu Asn Tyr Cys Asn 
            100                 105                 110 


<210> 22
<211> 11
<212> PRT
<213> Homo sapiens

<400> 22
Met Arg Leu Leu Pro Leu Leu Ala Leu Leu Ala 
1               5                   10      


<210> 23
<211> 15
<212> PRT
<213> Homo sapiens

<400> 23
Ser His Leu Val Glu Ala Leu Tyr Leu Val Cys Gly Glu Arg Gly 
1               5                   10                  15  


<210> 24
<211> 9
<212> PRT
<213> Homo sapiens

<400> 24
Leu Tyr Leu Val Cys Gly Glu Arg Gly 
1               5                   


<210> 25
<211> 15
<212> PRT
<213> Homo sapiens

<400> 25
Gly Ile Val Glu Gln Cys Cys Thr Ser Ile Cys Ser Leu Tyr Gln 
1               5                   10                  15  


<210> 26
<211> 5
<212> PRT
<213> Homo sapiens


<220>
<221> VARIANT
<222> (1)..(1)
<223> /replace="Arg"

<220>
<221> VARIANT
<222> (2)..(2)
<223> /replace="Arg"

<220>
<221> SITE
<222> (1)..(5)
<223> /note="Variant residues given in the sequence have no 
      preference with respect to those in the annotations
      for variant positions"

<400> 26
Gln Lys Arg Ala Ala 
1               5   


<210> 27
<211> 8
<212> PRT
<213> Homo sapiens

<400> 27
Ala Gly Glu Arg Gly Pro Pro Gly 
1               5               


<210> 28
<211> 15
<212> PRT
<213> Homo sapiens

<400> 28
Ala Gly Gly Phe Asp Glu Lys Ala Gly Gly Ala Gln Leu Gly Val 
1               5                   10                  15  


<210> 29
<211> 11
<212> PRT
<213> Homo sapiens

<400> 29
Val Gly Pro Ala Gly Gly Pro Gly Phe Pro Gly 
1               5                   10      


<210> 30
<211> 30
<212> PRT
<213> Homo sapiens

<400> 30
Ser Leu Lys Leu Met Ala Thr Leu Phe Ser Thr Tyr Ala Ser Ala Asp 
1               5                   10                  15      


Thr Gly Asp Ser Gly Lys Gly Lys Gly Gly Lys Lys Lys Gly 
            20                  25                  30  


<210> 31
<211> 14
<212> PRT
<213> Homo sapiens

<400> 31
Gly Gln Phe Ile Asp Ser Gly Lys Ala Gly Ala Glu Lys Leu 
1               5                   10                  


<210> 32
<211> 14
<212> PRT
<213> Homo sapiens

<400> 32
Asp Glu Cys Ser Glu Leu Lys Lys Asp Ile Asp Asp Leu Glu 
1               5                   10                  


<210> 33
<211> 12
<212> PRT
<213> Homo sapiens


<220>
<221> MOD_RES
<222> (5)..(5)
<223> 3,5,3',5'-tetraiodothyronine 

<400> 33
Asn Ile Phe Glu Xaa Gln Val Asp Ala Gln Pro Leu 
1               5                   10          


<210> 34
<211> 22
<212> PRT
<213> Homo sapiens


<220>
<221> MOD_RES
<222> (10)..(10)
<223> 3,5,3',5'-tetraiodothyronine 

<400> 34
Tyr Ser Leu Glu His Ser Thr Asp Asp Xaa Ala Ser Phe Ser Arg Ala 
1               5                   10                  15      


Leu Glu Asn Ala Thr Arg 
            20          


<210> 35
<211> 20
<212> PRT
<213> Homo sapiens


<220>
<221> MOD_RES
<222> (10)..(10)
<223> 3,5,3',5'-tetraiodothyronine 

<400> 35
Arg Ala Leu Glu Asn Ala Thr Arg Asp Xaa Phe Ile Ile Cys Pro Ile 
1               5                   10                  15      


Ile Asp Met Ala 
            20  


<210> 36
<211> 14
<212> PRT
<213> Homo sapiens


<220>
<221> MOD_RES
<222> (12)..(12)
<223> 3,5,3',5'-tetraiodothyronine 

<400> 36
Leu Leu Ser Leu Gln Glu Pro Gly Ser Lys Thr Xaa Ser Lys 
1               5                   10                  


<210> 37
<211> 16
<212> PRT
<213> Homo sapiens


<220>
<221> MOD_RES
<222> (7)..(7)
<223> 3,5,3',5'-tetraiodothyronine 

<400> 37
Glu His Ser Thr Asp Asp Xaa Ala Ser Phe Ser Arg Ala Leu Glu Asn 
1               5                   10                  15      


<210> 38
<211> 14
<212> PRT
<213> Homo sapiens

<400> 38
Leu Lys Lys Arg Gly Ile Leu Ser Pro Ala Gln Leu Leu Ser 
1               5                   10                  


<210> 39
<211> 16
<212> PRT
<213> Homo sapiens

<400> 39
Ser Gly Val Ile Ala Arg Ala Ala Glu Ile Met Glu Thr Ser Ile Gln 
1               5                   10                  15      


<210> 40
<211> 14
<212> PRT
<213> Homo sapiens

<400> 40
Pro Pro Val Arg Glu Val Thr Arg His Val Ile Gln Val Ser 
1               5                   10                  


<210> 41
<211> 15
<212> PRT
<213> Homo sapiens

<400> 41
Pro Arg Gln Gln Met Asn Gly Leu Thr Ser Phe Leu Asp Ala Ser 
1               5                   10                  15  


<210> 42
<211> 15
<212> PRT
<213> Homo sapiens

<400> 42
Leu Thr Ala Leu His Thr Leu Trp Leu Arg Glu His Asn Arg Leu 
1               5                   10                  15  


<210> 43
<211> 15
<212> PRT
<213> Homo sapiens

<400> 43
His Asn Arg Leu Ala Ala Ala Leu Lys Ala Leu Asn Ala His Trp 
1               5                   10                  15  


<210> 44
<211> 14
<212> PRT
<213> Homo sapiens

<400> 44
Ala Arg Lys Val Val Gly Ala Leu His Gln Ile Ile Thr Leu 
1               5                   10                  


<210> 45
<211> 16
<212> PRT
<213> Homo sapiens

<400> 45
Leu Pro Gly Leu Trp Leu His Gln Ala Phe Phe Ser Pro Trp Thr Leu 
1               5                   10                  15      


<210> 46
<211> 17
<212> PRT
<213> Homo sapiens

<400> 46
Met Asn Glu Glu Leu Thr Glu Arg Leu Phe Val Leu Ser Asn Ser Ser 
1               5                   10                  15      


Thr 
    


<210> 47
<211> 11
<212> PRT
<213> Homo sapiens

<400> 47
Leu Asp Leu Ala Ser Ile Asn Leu Gln Arg Gly 
1               5                   10      


<210> 48
<211> 16
<212> PRT
<213> Homo sapiens

<400> 48
Arg Ser Val Ala Asp Lys Ile Leu Asp Leu Tyr Lys His Pro Asp Asn 
1               5                   10                  15      


<210> 49
<211> 14
<212> PRT
<213> Homo sapiens

<400> 49
Ile Asp Val Trp Leu Gly Gly Leu Ala Glu Asn Phe Leu Pro 
1               5                   10                  


<210> 50
<211> 12
<212> PRT
<213> Homo sapiens

<400> 50
Gln Gln Gln His Glu Arg Arg Lys Gln Glu Arg Lys 
1               5                   10          


<210> 51
<211> 14
<212> PRT
<213> Homo sapiens

<400> 51
Pro Thr Lys Glu Ile Glu Ile Gln Val Asp Trp Asn Ser Glu 
1               5                   10                  


<210> 52
<211> 6
<212> PRT
<213> Artificial Sequence

<220>
<221> source
<223> /note="Description of Artificial Sequence: Synthetic
      6xHis tag"

<400> 52
His His His His His His 
1               5       


<210> 53
<211> 12
<212> PRT
<213> Artificial Sequence

<220>
<221> source
<223> /note="Description of Artificial Sequence: Synthetic
      peptide"

<400> 53
Val Tyr Phe Cys Ala Val Arg Ser Tyr Asn Gln Gly 
1               5                   10          


<210> 54
<211> 11
<212> PRT
<213> Artificial Sequence

<220>
<221> source
<223> /note="Description of Artificial Sequence: Synthetic
      peptide"

<400> 54
Cys Ala Ser Ser Leu Asp Pro Gly Ala Asn Thr 
1               5                   10      


<210> 55
<211> 12
<212> PRT
<213> Artificial Sequence

<220>
<221> source
<223> /note="Description of Artificial Sequence: Synthetic
      peptide"

<400> 55
Val Tyr Phe Cys Ala Leu Arg Ser Tyr Asn Phe Gly 
1               5                   10          


<210> 56
<211> 11
<212> PRT
<213> Artificial Sequence

<220>
<221> source
<223> /note="Description of Artificial Sequence: Synthetic
      peptide"

<400> 56
Cys Ala Ser Ser Leu Asp Cys Gly Ala Asn Pro 
1               5                   10      


