                         SEQUENCE LISTING

<110>  Intervet, Inc.
       Intervet International, BV
       Mogler, Mark A.
       Kitikoon, Pravina
       Puttamreddy, Supraja
       Strait, Erin
       Segers, Ruud A.M.
       Nagaraj, Basav
 
<120>  SWINE INFLUENZA A VIRUS VACCINE

<130>  24554WO

<150>  US 62/607,101
<151>  2017-12-18

<160>  27    

<170>  PatentIn version 3.5

<210>  1
<211>  1407
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Codon optimized swine influenza virus sequence

<400>  1
atgaatacta atcaaaggat cattaccatt gggacagtct gcatgattgt cggtatcatc       60

tctcttttgc ttcagattgg aaacattgtc tcactttgga ttagccattc aattcagacc      120

ggatgggaga atcacactga gatgtgcaat caaagtgtca ttacttatgt caataacact      180

tgggtgaacc ggacttatgt gaacattagc aatatcaaga ttgcaactat tcaagatgtg      240

actagtatca ttttggccgg aaattctagt ctttgcccgg tgtcagggtg ggctgtctac      300

agcaaagaca atagcattag gattggatca aaaggggaca ttttcgtcat tagagagcct      360

ttcatctcat gctcacaatt ggagtgccgg accttctttc tgacccaagg ggcattgctg      420

aatgacaaac attcaaatgg taccgtcaag gacaggagtc cttatagaac cctgatgagc      480

tgccctatcg gtgaggcccc ttcgccatac aactcacggt tcgaatctgt cgcatggtca      540

gcatctgctt gtcatgatgg aatgggatgg cttacaatcg ggatcagtgg accggataat      600

ggtgctgtcg cagtcttgaa atacaacgga atcattacag atacaatcaa atcttggagg      660

aacaagattc ttagaactca agaatcagag tgtgtctgta tgaacggatc atgttttaca      720

gtcttgacag atggcccaag caatggacaa gcctcttaca aaatctttaa ggtggaaaaa      780

ggaaagatta tcaagtcgat tgagctggat gcccccaatt accactatga agaatgctct      840

tgttatccag atactggcaa agtcatgtgt gtctgccggg acaattggca cgcctcaaac      900

cggccatggg tgtcgttcaa tcagaatctt gactatcaaa ttggatacat ttgctctgga      960

gtctttggtg ataaccctag atccaatgat gggaagggca attgtggccc ggtcctttct     1020

aatggagcaa atggagtgaa aggtttctca tatcggtatg gaaatggtgt gtggattggt     1080

cggaccaagt caatcaactc tcggtcgggt tttgagatga tttgggatcc gaatggatgg     1140

actgagacag attcatcatt ctcgatgaag caggacatta tcgctcttaa tgattggtct     1200

ggatactcgg gatcttttgt ccaacatccg gagcttactg gtatgaattg cattaggcct     1260

tgtttctggg tggaattgat cagagggcaa cccaaggaaa gcactatctg ggctagcggt     1320

tccagcatct cattctgtgg cgtcaattcg gaaaccgctt cctggtcttg gccagacgga     1380

gctgatctgc cattcaccat tgacaag                                         1407


<210>  2
<211>  469
<212>  PRT
<213>  swine influenza virus

<400>  2

Met Asn Thr Asn Gln Arg Ile Ile Thr Ile Gly Thr Val Cys Met Ile 
1               5                   10                  15      


Val Gly Ile Ile Ser Leu Leu Leu Gln Ile Gly Asn Ile Val Ser Leu 
            20                  25                  30          


Trp Ile Ser His Ser Ile Gln Thr Gly Trp Glu Asn His Thr Glu Met 
        35                  40                  45              


Cys Asn Gln Ser Val Ile Thr Tyr Val Asn Asn Thr Trp Val Asn Arg 
    50                  55                  60                  


Thr Tyr Val Asn Ile Ser Asn Ile Lys Ile Ala Thr Ile Gln Asp Val 
65                  70                  75                  80  


Thr Ser Ile Ile Leu Ala Gly Asn Ser Ser Leu Cys Pro Val Ser Gly 
                85                  90                  95      


Trp Ala Val Tyr Ser Lys Asp Asn Ser Ile Arg Ile Gly Ser Lys Gly 
            100                 105                 110         


Asp Ile Phe Val Ile Arg Glu Pro Phe Ile Ser Cys Ser Gln Leu Glu 
        115                 120                 125             


Cys Arg Thr Phe Phe Leu Thr Gln Gly Ala Leu Leu Asn Asp Lys His 
    130                 135                 140                 


Ser Asn Gly Thr Val Lys Asp Arg Ser Pro Tyr Arg Thr Leu Met Ser 
145                 150                 155                 160 


Cys Pro Ile Gly Glu Ala Pro Ser Pro Tyr Asn Ser Arg Phe Glu Ser 
                165                 170                 175     


Val Ala Trp Ser Ala Ser Ala Cys His Asp Gly Met Gly Trp Leu Thr 
            180                 185                 190         


Ile Gly Ile Ser Gly Pro Asp Asn Gly Ala Val Ala Val Leu Lys Tyr 
        195                 200                 205             


Asn Gly Ile Ile Thr Asp Thr Ile Lys Ser Trp Arg Asn Lys Ile Leu 
    210                 215                 220                 


Arg Thr Gln Glu Ser Glu Cys Val Cys Met Asn Gly Ser Cys Phe Thr 
225                 230                 235                 240 


Val Leu Thr Asp Gly Pro Ser Asn Gly Gln Ala Ser Tyr Lys Ile Phe 
                245                 250                 255     


Lys Val Glu Lys Gly Lys Ile Ile Lys Ser Ile Glu Leu Asp Ala Pro 
            260                 265                 270         


Asn Tyr His Tyr Glu Glu Cys Ser Cys Tyr Pro Asp Thr Gly Lys Val 
        275                 280                 285             


Met Cys Val Cys Arg Asp Asn Trp His Ala Ser Asn Arg Pro Trp Val 
    290                 295                 300                 


Ser Phe Asn Gln Asn Leu Asp Tyr Gln Ile Gly Tyr Ile Cys Ser Gly 
305                 310                 315                 320 


Val Phe Gly Asp Asn Pro Arg Ser Asn Asp Gly Lys Gly Asn Cys Gly 
                325                 330                 335     


Pro Val Leu Ser Asn Gly Ala Asn Gly Val Lys Gly Phe Ser Tyr Arg 
            340                 345                 350         


Tyr Gly Asn Gly Val Trp Ile Gly Arg Thr Lys Ser Ile Asn Ser Arg 
        355                 360                 365             


Ser Gly Phe Glu Met Ile Trp Asp Pro Asn Gly Trp Thr Glu Thr Asp 
    370                 375                 380                 


Ser Ser Phe Ser Met Lys Gln Asp Ile Ile Ala Leu Asn Asp Trp Ser 
385                 390                 395                 400 


Gly Tyr Ser Gly Ser Phe Val Gln His Pro Glu Leu Thr Gly Met Asn 
                405                 410                 415     


Cys Ile Arg Pro Cys Phe Trp Val Glu Leu Ile Arg Gly Gln Pro Lys 
            420                 425                 430         


Glu Ser Thr Ile Trp Ala Ser Gly Ser Ser Ile Ser Phe Cys Gly Val 
        435                 440                 445             


Asn Ser Glu Thr Ala Ser Trp Ser Trp Pro Asp Gly Ala Asp Leu Pro 
    450                 455                 460                 


Phe Thr Ile Asp Lys 
465                 


<210>  3
<211>  1407
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Codon optimized swine influenza virus sequence

<400>  3
atgaatccta accaaaagat cattaccatt ggttcggtct gtatgacaat tggaatggct       60

aacctgatcc ttcaaattgg aaacattatc tcaatctggg tcagccactc aattcaaatt      120

ggaaatcaat cgcagattga aacatgcaac caaagcgtca ttacttacga aaacaacact      180

tgggtgaacc agacctacgt gaacatcagc aacaccaact tcgctgctgg acagtccgtg      240

gtttccgtga aactggcggg caactcctct ctctgccctg tgagcggatg ggctatctac      300

tccaaagaca actcagtcag aatcggttcc aagggggatg tgtttgtcat aagggaacca      360

ttcatctcat gctctcccct tgaatgcaga accttcttct tgactcaagg ggccttgcta      420

aatgacaaac attccaacgg aaccattaaa gacaggagcc catatcggac cctgatgagc      480

tgtcctatcg gtgaagtccc ctcgccatac aactcaagat ttgagtcagt cgcttggtca      540

gcatccgctt gtcatgatgg catcaattgg ctcaccattg gaatttctgg cccagacagt      600

ggggcagtgg ctgtgctgaa gtacaatggc attataacag acactatcaa gtcgtggagg      660

aacaacatat tgagaactca agagtctgaa tgtgcatgtg tgaatggttc ttgctttacc      720

atcatgaccg atggaccatc cgatggacag gcctcctaca agatcttcag aatcgaaaag      780

ggaaagatcg tcaaatcagt cgaaatgaat gcccctaact accactatga ggaatgctcc      840

tgttatcctg attcctccga aatcacgtgc gtgtgcaggg ataactggca tggctccaat      900

cggccgtggg tgtctttcaa ccagaatctg gaatatcaga tcggatacat ttgctccggg      960

gtgttcggag acaatccgcg ccctaatgat aagacaggct cgtgtggtcc agtctcgtct     1020

aacggagcca acggagtcaa aggattttca ttcaaatacg gcaatggagt gtggataggg     1080

agaactaaga gcatttcctc aagaaaaggt ttcgagatga tttgggatcc gaatggatgg     1140

actgggactg acaacaagtt ctcaatcaag caagacatcg tgggaatcag cgagtggtca     1200

ggatatagcg ggtcctttgt gcagcacccc gaactgaccg ggctggattg tattagacct     1260

tgcttctggg tcgaactcat cagagggcga cccgaagaga acacaatctg gactagcggg     1320

agcagcatct ccttttgtgg tgtgaactcg gacactgtgg gttggtcttg gccagacggt     1380

gctgagttgc cttttaccat tgacaag                                         1407


<210>  4
<211>  469
<212>  PRT
<213>  swine influenza virus

<400>  4

Met Asn Pro Asn Gln Lys Ile Ile Thr Ile Gly Ser Val Cys Met Thr 
1               5                   10                  15      


Ile Gly Met Ala Asn Leu Ile Leu Gln Ile Gly Asn Ile Ile Ser Ile 
            20                  25                  30          


Trp Val Ser His Ser Ile Gln Ile Gly Asn Gln Ser Gln Ile Glu Thr 
        35                  40                  45              


Cys Asn Gln Ser Val Ile Thr Tyr Glu Asn Asn Thr Trp Val Asn Gln 
    50                  55                  60                  


Thr Tyr Val Asn Ile Ser Asn Thr Asn Phe Ala Ala Gly Gln Ser Val 
65                  70                  75                  80  


Val Ser Val Lys Leu Ala Gly Asn Ser Ser Leu Cys Pro Val Ser Gly 
                85                  90                  95      


Trp Ala Ile Tyr Ser Lys Asp Asn Ser Val Arg Ile Gly Ser Lys Gly 
            100                 105                 110         


Asp Val Phe Val Ile Arg Glu Pro Phe Ile Ser Cys Ser Pro Leu Glu 
        115                 120                 125             


Cys Arg Thr Phe Phe Leu Thr Gln Gly Ala Leu Leu Asn Asp Lys His 
    130                 135                 140                 


Ser Asn Gly Thr Ile Lys Asp Arg Ser Pro Tyr Arg Thr Leu Met Ser 
145                 150                 155                 160 


Cys Pro Ile Gly Glu Val Pro Ser Pro Tyr Asn Ser Arg Phe Glu Ser 
                165                 170                 175     


Val Ala Trp Ser Ala Ser Ala Cys His Asp Gly Ile Asn Trp Leu Thr 
            180                 185                 190         


Ile Gly Ile Ser Gly Pro Asp Ser Gly Ala Val Ala Val Leu Lys Tyr 
        195                 200                 205             


Asn Gly Ile Ile Thr Asp Thr Ile Lys Ser Trp Arg Asn Asn Ile Leu 
    210                 215                 220                 


Arg Thr Gln Glu Ser Glu Cys Ala Cys Val Asn Gly Ser Cys Phe Thr 
225                 230                 235                 240 


Ile Met Thr Asp Gly Pro Ser Asp Gly Gln Ala Ser Tyr Lys Ile Phe 
                245                 250                 255     


Arg Ile Glu Lys Gly Lys Ile Val Lys Ser Val Glu Met Asn Ala Pro 
            260                 265                 270         


Asn Tyr His Tyr Glu Glu Cys Ser Cys Tyr Pro Asp Ser Ser Glu Ile 
        275                 280                 285             


Thr Cys Val Cys Arg Asp Asn Trp His Gly Ser Asn Arg Pro Trp Val 
    290                 295                 300                 


Ser Phe Asn Gln Asn Leu Glu Tyr Gln Ile Gly Tyr Ile Cys Ser Gly 
305                 310                 315                 320 


Val Phe Gly Asp Asn Pro Arg Pro Asn Asp Lys Thr Gly Ser Cys Gly 
                325                 330                 335     


Pro Val Ser Ser Asn Gly Ala Asn Gly Val Lys Gly Phe Ser Phe Lys 
            340                 345                 350         


Tyr Gly Asn Gly Val Trp Ile Gly Arg Thr Lys Ser Ile Ser Ser Arg 
        355                 360                 365             


Lys Gly Phe Glu Met Ile Trp Asp Pro Asn Gly Trp Thr Gly Thr Asp 
    370                 375                 380                 


Asn Lys Phe Ser Ile Lys Gln Asp Ile Val Gly Ile Ser Glu Trp Ser 
385                 390                 395                 400 


Gly Tyr Ser Gly Ser Phe Val Gln His Pro Glu Leu Thr Gly Leu Asp 
                405                 410                 415     


Cys Ile Arg Pro Cys Phe Trp Val Glu Leu Ile Arg Gly Arg Pro Glu 
            420                 425                 430         


Glu Asn Thr Ile Trp Thr Ser Gly Ser Ser Ile Ser Phe Cys Gly Val 
        435                 440                 445             


Asn Ser Asp Thr Val Gly Trp Ser Trp Pro Asp Gly Ala Glu Leu Pro 
    450                 455                 460                 


Phe Thr Ile Asp Lys 
465                 


<210>  5
<211>  1407
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Codon optimized swine influenza virus sequence

<400>  5
atgaatccaa accaaaagat aatcacaatt ggctctgttt ctctcactat tgccacaatg       60

tgcctcctta tgcaaattgc catcctgatt actaatgtca cattgcactc caatcagtac      120

gaatgcaact accccccaaa caaccaagtg atactgtgtg aaccaactat catcaaaaga      180

aacattactg agattgtgta tctggccaac accaccatag agaaggaaat ctgccccaag      240

ctggcagaat acagaaactg gtcgaagccg caatgtaaaa ttacagggtt tgcacctttt      300

tccaaggaca attcgattag gctttctgcg ggtggcgaca tttgggtaac gagagaacct      360

tatgtgtcat gcgatcctga taagtgttac cagtttgccc ttggacaagg aacaacgctc      420

aacaacagac attcaaacga caccgtgcat gataggaccc cttatcgaac cctattgatg      480

aatgagttgg gtattccatt ccatttgggg accaaacaag tgtgcatcgc atggtccagc      540

tcatcctgcc atgatggacg ggcttggctt catgtctgta ttactgggca tgacaacaat      600

gcaactgcca gcatcattta caatggacgc cttgtcgata gtattggttc atggtccaaa      660

agaatcctca ggacccagga gtcggaatgc gtgtgcatca atggaacttg taccgtggtc      720

atgactgatg ggtccgcttc aggaatagct gacactaaaa tcctgttcat tgaagagggg      780

aaaatcgtgc acattagccc actgctgggg tccgctcagc acgtggagga gtgctcctgc      840

tatccccgat acccaggtgt cagatgcatc tgtagagaca actggaaagg ctccaacaga      900

cctgtcgtgg atattaatgt gaaggattat agcattgtgt cctcctacgt gtgctccgga      960

ctggtgggag acacccccag aaaagacgac agatccagct ccagcaattg tctgaatcct     1020

aacaacgaga aaggggagca tggagtgaaa ggctgggcct ttgatgatgg aaatgacgtg     1080

tggatgggga ggacaatcaa cgagacatta cgctcaggtt atgaaacctt caaagtcatt     1140

gaaggctggt ccaaacctaa ttccaaattg cagataaatc gccaagtcat tgttgaaaga     1200

gatgataggt ccggttattc tggaattttc tctgtcgaag gaaagagctg tatcaatcgg     1260

tgtttttacg tggagctgat cagaggaagg aaacaggaaa ctgcagtgtg gtggacgtca     1320

aattccattg tggtgttttg tggcacctca ggtacctatg gaaccggctc atggcctgat     1380

ggggcggaca tcaatctcat gcctgtg                                         1407


<210>  6
<211>  469
<212>  PRT
<213>  swine influenza virus

<400>  6

Met Asn Pro Asn Gln Lys Ile Ile Thr Ile Gly Ser Val Ser Leu Thr 
1               5                   10                  15      


Ile Ala Thr Met Cys Leu Leu Met Gln Ile Ala Ile Leu Ile Thr Asn 
            20                  25                  30          


Val Thr Leu His Ser Asn Gln Tyr Glu Cys Asn Tyr Pro Pro Asn Asn 
        35                  40                  45              


Gln Val Ile Leu Cys Glu Pro Thr Ile Ile Lys Arg Asn Ile Thr Glu 
    50                  55                  60                  


Ile Val Tyr Leu Ala Asn Thr Thr Ile Glu Lys Glu Ile Cys Pro Lys 
65                  70                  75                  80  


Leu Ala Glu Tyr Arg Asn Trp Ser Lys Pro Gln Cys Lys Ile Thr Gly 
                85                  90                  95      


Phe Ala Pro Phe Ser Lys Asp Asn Ser Ile Arg Leu Ser Ala Gly Gly 
            100                 105                 110         


Asp Ile Trp Val Thr Arg Glu Pro Tyr Val Ser Cys Asp Pro Asp Lys 
        115                 120                 125             


Cys Tyr Gln Phe Ala Leu Gly Gln Gly Thr Thr Leu Asn Asn Arg His 
    130                 135                 140                 


Ser Asn Asp Thr Val His Asp Arg Thr Pro Tyr Arg Thr Leu Leu Met 
145                 150                 155                 160 


Asn Glu Leu Gly Ile Pro Phe His Leu Gly Thr Lys Gln Val Cys Ile 
                165                 170                 175     


Ala Trp Ser Ser Ser Ser Cys His Asp Gly Arg Ala Trp Leu His Val 
            180                 185                 190         


Cys Ile Thr Gly His Asp Asn Asn Ala Thr Ala Ser Ile Ile Tyr Asn 
        195                 200                 205             


Gly Arg Leu Val Asp Ser Ile Gly Ser Trp Ser Lys Arg Ile Leu Arg 
    210                 215                 220                 


Thr Gln Glu Ser Glu Cys Val Cys Ile Asn Gly Thr Cys Thr Val Val 
225                 230                 235                 240 


Met Thr Asp Gly Ser Ala Ser Gly Ile Ala Asp Thr Lys Ile Leu Phe 
                245                 250                 255     


Ile Glu Glu Gly Lys Ile Val His Ile Ser Pro Leu Leu Gly Ser Ala 
            260                 265                 270         


Gln His Val Glu Glu Cys Ser Cys Tyr Pro Arg Tyr Pro Gly Val Arg 
        275                 280                 285             


Cys Ile Cys Arg Asp Asn Trp Lys Gly Ser Asn Arg Pro Val Val Asp 
    290                 295                 300                 


Ile Asn Val Lys Asp Tyr Ser Ile Val Ser Ser Tyr Val Cys Ser Gly 
305                 310                 315                 320 


Leu Val Gly Asp Thr Pro Arg Lys Asp Asp Arg Ser Ser Ser Ser Asn 
                325                 330                 335     


Cys Leu Asn Pro Asn Asn Glu Lys Gly Glu His Gly Val Lys Gly Trp 
            340                 345                 350         


Ala Phe Asp Asp Gly Asn Asp Val Trp Met Gly Arg Thr Ile Asn Glu 
        355                 360                 365             


Thr Leu Arg Ser Gly Tyr Glu Thr Phe Lys Val Ile Glu Gly Trp Ser 
    370                 375                 380                 


Lys Pro Asn Ser Lys Leu Gln Ile Asn Arg Gln Val Ile Val Glu Arg 
385                 390                 395                 400 


Asp Asp Arg Ser Gly Tyr Ser Gly Ile Phe Ser Val Glu Gly Lys Ser 
                405                 410                 415     


Cys Ile Asn Arg Cys Phe Tyr Val Glu Leu Ile Arg Gly Arg Lys Gln 
            420                 425                 430         


Glu Thr Ala Val Trp Trp Thr Ser Asn Ser Ile Val Val Phe Cys Gly 
        435                 440                 445             


Thr Ser Gly Thr Tyr Gly Thr Gly Ser Trp Pro Asp Gly Ala Asp Ile 
    450                 455                 460                 


Asn Leu Met Pro Val 
465                 


<210>  7
<211>  1407
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Codon optimized swine influenza virus sequence

<400>  7
atgaatccaa atcaaaagat cattactatt ggatcagtct cactcatcat tgccacaatt       60

tgtttcctta tgcaaattgc aatccttgtc actactgtca cattgcattt caagcagcat      120

gactacaact cccccccaaa caaccaagct actctgtgtg aaccaacaat cattgaacgg      180

aaaacaactg aaattgtgta tcttactaac accaccattg agaaagaagt ctgccccaaa      240

cttgcagagt accggaactg gtcaaagcct caatgtaaca ttactggatt tgcaccattt      300

tcgaaagaca attctattcg gttgtctgct ggtggggaca tctgggtgac tagggaacct      360

tatgtgtcat gcgatcctga caagtgttac caatttgccc ttggacaggg tacaactctt      420

aacaacggac attcgaataa cacagtccat gataggaccc cgtatcggac ccttcttatg      480

aatgagcttg gtgtcccttt tcatcttgga accagacaag tgtgcatggc ttggtctagc      540

tcatcttgtc acgatgggaa agcatggctg catgtctgtg tcactggaaa tgataacaat      600

gctactgcta gcttcatcta caatggtagg cttgtggatt ctattggttc gtggtcgaaa      660

aacattctcc ggacccaaga gtcagaatgc gtctgtatca atggaacatg tactgtcgtc      720

atgactgatg gatccgctag tggaaaagca gataccaaaa tcttgttcgt cgaagagggg      780

aagatcgtcc atatcagcac tctgttggga tctgcacagc acgtcgagga atgctcctgt      840

tatcctaggt ttccgggagt ccggtgtgtc tgccgggaca actggaaagg atctaataga      900

cccatcgtcg acatcaatgt caagaattac agcattgtct cttcgtatgt ctgcagtgga      960

cttgtcggtg atactcccag agagagcgac tcagtctcct catcttattg cttggatccg     1020

aacaatgaga agggtggtca tggggtgaaa gggtgggcct ttgatgatgg taatgacgtg     1080

tggatgggaa gaacaatcaa cgagactttg cgcttgggat atgaaacctt caaagtcatt     1140

gaaggctggt ccacagctaa ctccaagtca cagacaaata gacaagtgat tgtcgaaaaa     1200

ggagacaggt caggatattc tgggattttc tcagtcgagg gaaagaactg catcaatagg     1260

tgcttctatg tggagttgat tagaggacgg aaagaggaga caaaagtctg gtggaccagt     1320

aactcaattg tcgtgttttg tggcacctca gggacttatg gtactggctc ttggccggat     1380

ggtgctgaca tcaatctcat gccaatt                                         1407


<210>  8
<211>  469
<212>  PRT
<213>  swine influenza virus

<400>  8

Met Asn Pro Asn Gln Lys Ile Ile Thr Ile Gly Ser Val Ser Leu Ile 
1               5                   10                  15      


Ile Ala Thr Ile Cys Phe Leu Met Gln Ile Ala Ile Leu Val Thr Thr 
            20                  25                  30          


Val Thr Leu His Phe Lys Gln His Asp Tyr Asn Ser Pro Pro Asn Asn 
        35                  40                  45              


Gln Ala Thr Leu Cys Glu Pro Thr Ile Ile Glu Arg Lys Thr Thr Glu 
    50                  55                  60                  


Ile Val Tyr Leu Thr Asn Thr Thr Ile Glu Lys Glu Val Cys Pro Lys 
65                  70                  75                  80  


Leu Ala Glu Tyr Arg Asn Trp Ser Lys Pro Gln Cys Asn Ile Thr Gly 
                85                  90                  95      


Phe Ala Pro Phe Ser Lys Asp Asn Ser Ile Arg Leu Ser Ala Gly Gly 
            100                 105                 110         


Asp Ile Trp Val Thr Arg Glu Pro Tyr Val Ser Cys Asp Pro Asp Lys 
        115                 120                 125             


Cys Tyr Gln Phe Ala Leu Gly Gln Gly Thr Thr Leu Asn Asn Gly His 
    130                 135                 140                 


Ser Asn Asn Thr Val His Asp Arg Thr Pro Tyr Arg Thr Leu Leu Met 
145                 150                 155                 160 


Asn Glu Leu Gly Val Pro Phe His Leu Gly Thr Arg Gln Val Cys Met 
                165                 170                 175     


Ala Trp Ser Ser Ser Ser Cys His Asp Gly Lys Ala Trp Leu His Val 
            180                 185                 190         


Cys Val Thr Gly Asn Asp Asn Asn Ala Thr Ala Ser Phe Ile Tyr Asn 
        195                 200                 205             


Gly Arg Leu Val Asp Ser Ile Gly Ser Trp Ser Lys Asn Ile Leu Arg 
    210                 215                 220                 


Thr Gln Glu Ser Glu Cys Val Cys Ile Asn Gly Thr Cys Thr Val Val 
225                 230                 235                 240 


Met Thr Asp Gly Ser Ala Ser Gly Lys Ala Asp Thr Lys Ile Leu Phe 
                245                 250                 255     


Val Glu Glu Gly Lys Ile Val His Ile Ser Thr Leu Leu Gly Ser Ala 
            260                 265                 270         


Gln His Val Glu Glu Cys Ser Cys Tyr Pro Arg Phe Pro Gly Val Arg 
        275                 280                 285             


Cys Val Cys Arg Asp Asn Trp Lys Gly Ser Asn Arg Pro Ile Val Asp 
    290                 295                 300                 


Ile Asn Val Lys Asn Tyr Ser Ile Val Ser Ser Tyr Val Cys Ser Gly 
305                 310                 315                 320 


Leu Val Gly Asp Thr Pro Arg Glu Ser Asp Ser Val Ser Ser Ser Tyr 
                325                 330                 335     


Cys Leu Asp Pro Asn Asn Glu Lys Gly Gly His Gly Val Lys Gly Trp 
            340                 345                 350         


Ala Phe Asp Asp Gly Asn Asp Val Trp Met Gly Arg Thr Ile Asn Glu 
        355                 360                 365             


Thr Leu Arg Leu Gly Tyr Glu Thr Phe Lys Val Ile Glu Gly Trp Ser 
    370                 375                 380                 


Thr Ala Asn Ser Lys Ser Gln Thr Asn Arg Gln Val Ile Val Glu Lys 
385                 390                 395                 400 


Gly Asp Arg Ser Gly Tyr Ser Gly Ile Phe Ser Val Glu Gly Lys Asn 
                405                 410                 415     


Cys Ile Asn Arg Cys Phe Tyr Val Glu Leu Ile Arg Gly Arg Lys Glu 
            420                 425                 430         


Glu Thr Lys Val Trp Trp Thr Ser Asn Ser Ile Val Val Phe Cys Gly 
        435                 440                 445             


Thr Ser Gly Thr Tyr Gly Thr Gly Ser Trp Pro Asp Gly Ala Asp Ile 
    450                 455                 460                 


Asn Leu Met Pro Ile 
465                 


<210>  9
<211>  13
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  5' flanking sequence

<400>  9
ggcgcgccgc acc                                                          13


<210>  10
<211>  8
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  3' flanking sequence

<400>  10
ttaattaa                                                                 8


<210>  11
<211>  1410
<212>  DNA
<213>  swine influenza virus

<400>  11
atgaatccaa accaaaagat aataaccatt ggttcggtct gtatgacaat tggaatggct       60

aacttaatat tacaaattgg aaacataatc tcaatatgga ttagccactc aattcaactt      120

gggaatcaaa gtcagattga aacatgcaat caaagcgtca ttacttatga aaacaacact      180

tgggtaaatc agacatatgt taacatcagc aacaccaact ttgctgctgg acagtcagtg      240

gtttccgcga aattagcggg caattcctcc ctctgccctg ttagtggatg ggctatatac      300

agtaaagaca acagtgtaag aatcggttcc aagggggatg tgtttgtcat aagggaacca      360

ttcatatcat gctccccctt agaatgcaga accttcttct tgactcaagg ggccttgcta      420

aatgacaaac attccaatgg aaccattaaa gataggagcc catatcgaac cctgatgagc      480

tgtcctattg gtgaagttcc ctctccatac aactcaagat ttgagtcggt cgcttggtca      540

gcaagtgctt gtcacgatgg catcaattgg ctaacaatcg gaatttctgg cccagacagt      600

ggggcagtgg ctgtattaaa gtacaatggc ataataacag acactatcaa gagttggaaa      660

aacaatatat tgagaacaca agagtctgaa tgtgcatgtg taaatggttc ttgctttacc      720

ataatgaccg atggaccaag tgatggacag gcctcataca agatcttcag aatagaaaag      780

ggaaagatag tcaaatcagt cgaaatgaat gcccctaatt atcactatga ggaatgctcc      840

tgttatcctg attctagtga aatcacatgt gtgtgcaggg ataactggca tggctcgaat      900

cgaccgtggg tgtctttcaa ccagaatctg gaatatcaga taggatacat atgcagtggg      960

attttcggag acaatccacg ccctaatgat aagacaggca gttgtggtcc agtatcgtct     1020

aatggagcaa atggagtaaa aggattttca ttcaaatatg gcaatggtgt ttggataggg     1080

agaactaaaa gcattagttc aagaaaaggt tttgagatga tttgggatcc aaatggatgg     1140

actgggacag acaaaaactt ctcaataaag caagatatca taggaataaa tgagtggtca     1200

ggatacagcg ggagttttgt tcagcatcca gaactaacag ggctgaattg tataagacct     1260

tgcttctggg ttgaactaat cagagggcga cccaaagaga acacaatctg gactagcggg     1320

agcagcatat ccttttgtgg tgtaaacagt gacactgtgg gttggtcttg gccagacggt     1380

gctgagttgc catttaccat tgacaagtaa                                      1410


<210>  12
<211>  469
<212>  PRT
<213>  swine influenza virus

<400>  12

Met Asn Pro Asn Gln Lys Ile Ile Thr Ile Gly Ser Val Cys Met Thr 
1               5                   10                  15      


Ile Gly Met Ala Asn Leu Ile Leu Gln Ile Gly Asn Ile Ile Ser Ile 
            20                  25                  30          


Trp Ile Ser His Ser Ile Gln Leu Gly Asn Gln Ser Gln Ile Glu Thr 
        35                  40                  45              


Cys Asn Gln Ser Val Ile Thr Tyr Glu Asn Asn Thr Trp Val Asn Gln 
    50                  55                  60                  


Thr Tyr Val Asn Ile Ser Asn Thr Asn Phe Ala Ala Gly Gln Ser Val 
65                  70                  75                  80  


Val Ser Ala Lys Leu Ala Gly Asn Ser Ser Leu Cys Pro Val Ser Gly 
                85                  90                  95      


Trp Ala Ile Tyr Ser Lys Asp Asn Ser Val Arg Ile Gly Ser Lys Gly 
            100                 105                 110         


Asp Val Phe Val Ile Arg Glu Pro Phe Ile Ser Cys Ser Pro Leu Glu 
        115                 120                 125             


Cys Arg Thr Phe Phe Leu Thr Gln Gly Ala Leu Leu Asn Asp Lys His 
    130                 135                 140                 


Ser Asn Gly Thr Ile Lys Asp Arg Ser Pro Tyr Arg Thr Leu Met Ser 
145                 150                 155                 160 


Cys Pro Ile Gly Glu Val Pro Ser Pro Tyr Asn Ser Arg Phe Glu Ser 
                165                 170                 175     


Val Ala Trp Ser Ala Ser Ala Cys His Asp Gly Ile Asn Trp Leu Thr 
            180                 185                 190         


Ile Gly Ile Ser Gly Pro Asp Ser Gly Ala Val Ala Val Leu Lys Tyr 
        195                 200                 205             


Asn Gly Ile Ile Thr Asp Thr Ile Lys Ser Trp Lys Asn Asn Ile Leu 
    210                 215                 220                 


Arg Thr Gln Glu Ser Glu Cys Ala Cys Val Asn Gly Ser Cys Phe Thr 
225                 230                 235                 240 


Ile Met Thr Asp Gly Pro Ser Asp Gly Gln Ala Ser Tyr Lys Ile Phe 
                245                 250                 255     


Arg Ile Glu Lys Gly Lys Ile Val Lys Ser Val Glu Met Asn Ala Pro 
            260                 265                 270         


Asn Tyr His Tyr Glu Glu Cys Ser Cys Tyr Pro Asp Ser Ser Glu Ile 
        275                 280                 285             


Thr Cys Val Cys Arg Asp Asn Trp His Gly Ser Asn Arg Pro Trp Val 
    290                 295                 300                 


Ser Phe Asn Gln Asn Leu Glu Tyr Gln Ile Gly Tyr Ile Cys Ser Gly 
305                 310                 315                 320 


Ile Phe Gly Asp Asn Pro Arg Pro Asn Asp Lys Thr Gly Ser Cys Gly 
                325                 330                 335     


Pro Val Ser Ser Asn Gly Ala Asn Gly Val Lys Gly Phe Ser Phe Lys 
            340                 345                 350         


Tyr Gly Asn Gly Val Trp Ile Gly Arg Thr Lys Ser Ile Ser Ser Arg 
        355                 360                 365             


Lys Gly Phe Glu Met Ile Trp Asp Pro Asn Gly Trp Thr Gly Thr Asp 
    370                 375                 380                 


Lys Asn Phe Ser Ile Lys Gln Asp Ile Ile Gly Ile Asn Glu Trp Ser 
385                 390                 395                 400 


Gly Tyr Ser Gly Ser Phe Val Gln His Pro Glu Leu Thr Gly Leu Asn 
                405                 410                 415     


Cys Ile Arg Pro Cys Phe Trp Val Glu Leu Ile Arg Gly Arg Pro Lys 
            420                 425                 430         


Glu Asn Thr Ile Trp Thr Ser Gly Ser Ser Ile Ser Phe Cys Gly Val 
        435                 440                 445             


Asn Ser Asp Thr Val Gly Trp Ser Trp Pro Asp Gly Ala Glu Leu Pro 
    450                 455                 460                 


Phe Thr Ile Asp Lys 
465                 


<210>  13
<211>  1408
<212>  DNA
<213>  swine influenza virus

<400>  13
atgaacccaa atcagaagat aataatcatt agttcaatct gtatgacaaa tggaattgct       60

agcttgatat tacaaattgg gaacataata tcaatatgga ttagccattc aattcaaatt      120

gagaacccaa accagaccga ccatgcaatc aaagcgttat tatttacgaa aacaacacat      180

gggtaaatca aacgtatgtt aacatcagca acaataattt tgttgttgaa cagacagtgg      240

tttcaatgaa attagcgggc agttcttctc tctgccctgt tagtggatgg gctatataca      300

gtaaagataa cagtgtaaga atcggttcca aaggggatgt gtttgtcata agagagccat      360

tcatctcatg ctcccatttg gaatgtagaa ccttcttctt aactcaaggg gccctactga      420

atgataaaca ttctaatgga accgttaaag acagaagccc ctatcgaacc ctgatgagct      480

gtcctattgg tgaagtcccc tctccataca actcaaaatt tgagtcagtt gcttggtcag      540

caagtgcttg ccatgatggc accagttggt tgacaattgg gatttctggt ccagacaatg      600

gagcagtggc tgtgttgaaa tacaatgaca taataacaga cactatcaag agttggaaaa      660

acaacatatt gagaacacaa gaatctgaat gtgcatgttt gaatggttct tgctttactg      720

taatgaccga tggaccaagt aatgggcagg cctcatacaa gatcttcaaa atagaaaagg      780

ggaaagtagt caaatcagtc gagttgaatg ctcctaatta tcactatgag gaatgttcct      840

gttatcctga ttctggtgaa atcatatgtg tatgcaggga caattggcat ggctcgaatc      900

gaccatgggt gtctttcaat cagaatctgg agtatcagat aggatacata tgcagtgggg      960

ttctcggaga caatccgcgc cctaatgata gaacaggcag ttgtggtcca gtatcatctc     1020

atggagcaaa tggggtaaaa gggttttcgt ttaaatacgg caatggaatt tggataggga     1080

gaactaaaag cactattaca aggagtggtt ttgagatgat ttgggaccca aacggatgga     1140

ctggaacaga caataatttc tcagtgaagc aagatatcgt aggaataact aactggtcag     1200

gatacgcggg agttttgtcc aacatccaga attaaccgga ttggattgta ttagaccttg     1260

cttctgggtt gaactaatca gagggagacc caaagagaac acaatctgga ctagcggaag     1320

cagcatatcc ttttgtggtg taaatagtga cactgtgggt tggtcttggc cagacggtgc     1380

tgagttgcca tttaccattg acaagtaa                                        1408


<210>  14
<211>  469
<212>  PRT
<213>  swine influenza virus

<400>  14

Met Asn Pro Asn Gln Lys Ile Ile Ile Ile Ser Ser Ile Cys Met Thr 
1               5                   10                  15      


Asn Gly Ile Ala Ser Leu Ile Leu Gln Ile Gly Asn Ile Ile Ser Ile 
            20                  25                  30          


Trp Ile Ser His Ser Ile Gln Ile Glu Asn Pro Asn Gln Thr Glu Pro 
        35                  40                  45              


Cys Asn Gln Ser Val Ile Ile Tyr Glu Asn Asn Thr Trp Val Asn Gln 
    50                  55                  60                  


Thr Tyr Val Asn Ile Ser Asn Asn Asn Phe Val Val Glu Gln Thr Val 
65                  70                  75                  80  


Val Ser Met Lys Leu Ala Gly Ser Ser Ser Leu Cys Pro Val Ser Gly 
                85                  90                  95      


Trp Ala Ile Tyr Ser Lys Asp Asn Ser Val Arg Ile Gly Ser Lys Gly 
            100                 105                 110         


Asp Val Phe Val Ile Arg Glu Pro Phe Ile Ser Cys Ser His Leu Glu 
        115                 120                 125             


Cys Arg Thr Phe Phe Leu Thr Gln Gly Ala Leu Leu Asn Asp Lys His 
    130                 135                 140                 


Ser Asn Gly Thr Val Lys Asp Arg Ser Pro Tyr Arg Thr Leu Met Ser 
145                 150                 155                 160 


Cys Pro Ile Gly Glu Val Pro Ser Pro Tyr Asn Ser Lys Phe Glu Ser 
                165                 170                 175     


Val Ala Trp Ser Ala Ser Ala Cys His Asp Gly Thr Ser Trp Leu Thr 
            180                 185                 190         


Ile Gly Ile Ser Gly Pro Asp Asn Gly Ala Val Ala Val Leu Lys Tyr 
        195                 200                 205             


Asn Asp Ile Ile Thr Asp Thr Ile Lys Ser Trp Lys Asn Asn Ile Leu 
    210                 215                 220                 


Arg Thr Gln Glu Ser Glu Cys Ala Cys Leu Asn Gly Ser Cys Phe Thr 
225                 230                 235                 240 


Val Met Thr Asp Gly Pro Ser Asn Gly Gln Ala Ser Tyr Lys Ile Phe 
                245                 250                 255     


Lys Ile Glu Lys Gly Lys Val Val Lys Ser Val Glu Leu Asn Ala Pro 
            260                 265                 270         


Asn Tyr His Tyr Glu Glu Cys Ser Cys Tyr Pro Asp Ser Gly Glu Ile 
        275                 280                 285             


Ile Cys Val Cys Arg Asp Asn Trp His Gly Ser Asn Arg Pro Trp Val 
    290                 295                 300                 


Ser Phe Asn Gln Asn Leu Glu Tyr Gln Ile Gly Tyr Ile Cys Ser Gly 
305                 310                 315                 320 


Val Leu Gly Asp Asn Pro Arg Pro Asn Asp Arg Thr Gly Ser Cys Gly 
                325                 330                 335     


Pro Val Ser Ser His Gly Ala Asn Gly Val Lys Gly Phe Ser Phe Lys 
            340                 345                 350         


Tyr Gly Asn Gly Ile Trp Ile Gly Arg Thr Lys Ser Thr Ile Thr Arg 
        355                 360                 365             


Ser Gly Phe Glu Met Ile Trp Asp Pro Asn Gly Trp Thr Gly Thr Asp 
    370                 375                 380                 


Asn Asn Phe Ser Val Lys Gln Asp Ile Val Gly Ile Thr Asn Trp Ser 
385                 390                 395                 400 


Gly Tyr Ser Gly Ser Phe Val Gln His Pro Glu Leu Thr Gly Leu Asp 
                405                 410                 415     


Cys Ile Arg Pro Cys Phe Trp Val Glu Leu Ile Arg Gly Arg Pro Lys 
            420                 425                 430         


Glu Asn Thr Ile Trp Thr Ser Gly Ser Ser Ile Ser Phe Cys Gly Val 
        435                 440                 445             


Asn Ser Asp Thr Val Gly Trp Ser Trp Pro Asp Gly Ala Glu Leu Pro 
    450                 455                 460                 


Phe Thr Ile Asp Lys 
465                 


<210>  15
<211>  1410
<212>  DNA
<213>  swine influenza virus

<400>  15
atgaatccaa atcaaaagat aataacaatt ggttctgttt ctctcactat tacaacaatg       60

tgcctcttct tgcagattgc catcctagta actactataa cattgcattt caagcaatat      120

gaatgcgatt cccctgcaaa caaccaagta ataccgtgtg aaccaataat aatagaaaaa      180

aacataacaa aaatagtgta tttgaccaat accaccatag agaaagaggt atgcccaaaa      240

ttaggggaat acaggaattg gtcaaaacca caatgcaaga tcacaggatt tgcacctttt      300

tctaaggaca attcaattcg gctctctgcg ggtggggcca tttgggtcac gagagaacct      360

tatgtgtcat gcgaccctaa caagtgttat caatttgcat taggacaggg aaccacatta      420

gataacagac attcaaatga cacaatacat gatagaaccc cttttagaac cctgttgatg      480

agtgaattag gtgttccatt tcatttggga accagacaag tatgcatagc atggtccagt      540

tcaagttgtc acgatgggaa agcttggttg catgtttgtg tcactgggca tgataaaaat      600

gcaactgcta gtttcattta tgacggaaag cttgtagaca gcatcagttc atggtccaaa      660

aacatactcc ggactcagga atcagaatgt gtttgtatcg atggaatctg tacagtggtg      720

atgactgatg gaagtgcttc agggaaagct gatactaaga tactatttat tgaaaaaggg      780

aagatcattc atattagtcc attgttggga agtgctcagc atgtagaaga atgttcctgt      840

taccctagat accctgatgt caggtgtatt tgcagggata actggaaagg ttcaaatagg      900

cccatcgtag acataagaat gaaaaattat agcattggtt ccagttatat gtgctcagga      960

cttgttggcg acacacccag gaacaatgat gggtctagta atagcaattg tcggaatccc     1020

aataatgaaa gaggaaatca tggagtgaaa ggttgggcct ttgatgatgg aaatgacaca     1080

tggatgggaa gaactatcag caaggactca cgcttaggtt acgaaacctt caaagttgtt     1140

ggtggttggt cccaacccaa ttccaaatcc cagataaata gacaagttat tgttgacagc     1200

gataatagat caggttactc tggtattttc tctgttgagg ggaaagattg cattaatagg     1260

tgtttttatg tggaactaat aagaggaagg agacaggaaa ctagagtgtg gtggacttcg     1320

aacagtattg ttgtgttctg tggcacttct ggcacctatg ggtcaggctc atggcccgat     1380

ggagcaaaca tcaatttcat gcctgtataa                                      1410


<210>  16
<211>  469
<212>  PRT
<213>  swine influenza virus

<400>  16

Met Asn Pro Asn Gln Lys Ile Ile Thr Ile Gly Ser Val Ser Leu Thr 
1               5                   10                  15      


Ile Thr Thr Met Cys Leu Phe Leu Gln Ile Ala Ile Leu Val Thr Thr 
            20                  25                  30          


Ile Thr Leu His Phe Lys Gln Tyr Glu Cys Asp Ser Pro Ala Asn Asn 
        35                  40                  45              


Gln Val Ile Pro Cys Glu Pro Ile Ile Ile Glu Lys Asn Ile Thr Lys 
    50                  55                  60                  


Ile Val Tyr Leu Thr Asn Thr Thr Ile Glu Lys Glu Val Cys Pro Lys 
65                  70                  75                  80  


Leu Gly Glu Tyr Arg Asn Trp Ser Lys Pro Gln Cys Lys Ile Thr Gly 
                85                  90                  95      


Phe Ala Pro Phe Ser Lys Asp Asn Ser Ile Arg Leu Ser Ala Gly Gly 
            100                 105                 110         


Ala Ile Trp Val Thr Arg Glu Pro Tyr Val Ser Cys Asp Pro Asn Lys 
        115                 120                 125             


Cys Tyr Gln Phe Ala Leu Gly Gln Gly Thr Thr Leu Asp Asn Arg His 
    130                 135                 140                 


Ser Asn Asp Thr Ile His Asp Arg Thr Pro Phe Arg Thr Leu Leu Met 
145                 150                 155                 160 


Ser Glu Leu Gly Val Pro Phe His Leu Gly Thr Arg Gln Val Cys Ile 
                165                 170                 175     


Ala Trp Ser Ser Ser Ser Cys His Asp Gly Lys Ala Trp Leu His Val 
            180                 185                 190         


Cys Val Thr Gly His Asp Lys Asn Ala Thr Ala Ser Phe Ile Tyr Asp 
        195                 200                 205             


Gly Lys Leu Val Asp Ser Ile Ser Ser Trp Ser Lys Asn Ile Leu Arg 
    210                 215                 220                 


Thr Gln Glu Ser Glu Cys Val Cys Ile Asp Gly Ile Cys Thr Val Val 
225                 230                 235                 240 


Met Thr Asp Gly Ser Ala Ser Gly Lys Ala Asp Thr Lys Ile Leu Phe 
                245                 250                 255     


Ile Glu Lys Gly Lys Ile Ile His Ile Ser Pro Leu Leu Gly Ser Ala 
            260                 265                 270         


Gln His Val Glu Glu Cys Ser Cys Tyr Pro Arg Tyr Pro Asp Val Arg 
        275                 280                 285             


Cys Ile Cys Arg Asp Asn Trp Lys Gly Ser Asn Arg Pro Ile Val Asp 
    290                 295                 300                 


Ile Arg Met Lys Asn Tyr Ser Ile Gly Ser Ser Tyr Met Cys Ser Gly 
305                 310                 315                 320 


Leu Val Gly Asp Thr Pro Arg Asn Asn Asp Gly Ser Ser Asn Ser Asn 
                325                 330                 335     


Cys Arg Asn Pro Asn Asn Glu Arg Gly Asn His Gly Val Lys Gly Trp 
            340                 345                 350         


Ala Phe Asp Asp Gly Asn Asp Thr Trp Met Gly Arg Thr Ile Ser Lys 
        355                 360                 365             


Asp Ser Arg Leu Gly Tyr Glu Thr Phe Lys Val Val Gly Gly Trp Ser 
    370                 375                 380                 


Gln Pro Asn Ser Lys Ser Gln Ile Asn Arg Gln Val Ile Val Asp Ser 
385                 390                 395                 400 


Asp Asn Arg Ser Gly Tyr Ser Gly Ile Phe Ser Val Glu Gly Lys Asp 
                405                 410                 415     


Cys Ile Asn Arg Cys Phe Tyr Val Glu Leu Ile Arg Gly Arg Arg Gln 
            420                 425                 430         


Glu Thr Arg Val Trp Trp Thr Ser Asn Ser Ile Val Val Phe Cys Gly 
        435                 440                 445             


Thr Ser Gly Thr Tyr Gly Ser Gly Ser Trp Pro Asp Gly Ala Asn Ile 
    450                 455                 460                 


Asn Phe Met Pro Val 
465                 


<210>  17
<211>  1410
<212>  DNA
<213>  swine influenza virus

<400>  17
atgaattcaa atcaaaagat aataacaatt ggctctgttt ctctcactat tgccacacta       60

tgcctcctta tgcaaattgc tatcatggta actactgtaa catttcattt caagcagtat      120

gaatacaact cccccccgaa caaccaagta atgttgtgtg aaccaacgat aattgaaaga      180

aacataacag agacagtgta catgaccaac accaccatag tgaaagaaat atgccccaaa      240

ctagcggaat acagaaattg gtcaaaaccg caatgcaaaa ttacaggatt tgcacctttt      300

tcaaaggaca actcaattcg gctttccgct ggtggggaca tctgggtgac aagagaacct      360

tatgtgtcat gcgatcctaa caagtgttat caatttgccc ttgggcaggg aacaacgtta      420

aacaacaggc attcaaatga cacagtacat gatagaaccc cttaccgaac cctgttgatg      480

aatgaattgg gtgttccatt tcatttagga accaagcagg tttgcatagc ttggtccagt      540

tcaagttgtc atgatggaaa agcatggttg catgtttgtg taactgggca tgatgaaaat      600

gcaactgcca gtttcattta caacgagaga cttgtagata gtattggttc atggtccaag      660

aaaatcctca gaacccagga gtcggaatgc gtttgcataa atgggacttg tacagtggtg      720

atgacagatg ggagtgcttc aggtagagct gatactaaaa tactattcat tgaggagggg      780

aaaatcgttc atgttagcca actgacagga agtgctcagc atgtagagga gtgctcctgt      840

tatccccggt atcctggtgt cagatgtgtt tgcagagata attggaaagg ctccaatagg      900

cccattgtag atataaatgt aaaggatcat agcattgttt ccagttatgt gtgctcagga      960

cttgtcggag acacacccag aaaaaacgac agctctagca gtagtaactg cctgaatcct     1020

aacaatgaag aagggggtca tggggtgaaa ggctgggcct ttgatgatga aaatgacttg     1080

tggatgggaa gaacgatcag cgaaaagtta cgattaggtt atgaaacctt caaggtcatt     1140

gaaggctggt ccaagcctaa ttccaaattg cagataaata ggcaagtaat agttgacaaa     1200

gataatagat ccggttattc tggtattttc tctgttgaaa gtaaaagttg catcaatcgg     1260

tgcttttatg tggagttgat aagaggaagg aaacaggaaa atgaagtatg gtggacctca     1320

aacagcattg ttgtattttg tggcacctca ggtacatatg gaacaggctc atggcctgat     1380

ggggcagaca tcaatctcat gcctatatga                                      1410


<210>  18
<211>  469
<212>  PRT
<213>  swine influenza virus

<400>  18

Met Asn Ser Asn Gln Lys Ile Ile Thr Ile Gly Ser Val Ser Leu Thr 
1               5                   10                  15      


Ile Ala Thr Leu Cys Leu Leu Met Gln Ile Ala Ile Met Val Thr Thr 
            20                  25                  30          


Val Thr Phe His Phe Lys Gln Tyr Glu Tyr Asn Ser Pro Pro Asn Asn 
        35                  40                  45              


Gln Val Met Leu Cys Glu Pro Thr Ile Ile Glu Arg Asn Ile Thr Glu 
    50                  55                  60                  


Thr Val Tyr Met Thr Asn Thr Thr Ile Val Lys Glu Ile Cys Pro Lys 
65                  70                  75                  80  


Leu Ala Glu Tyr Arg Asn Trp Ser Lys Pro Gln Cys Lys Ile Thr Gly 
                85                  90                  95      


Phe Ala Pro Phe Ser Lys Asp Asn Ser Ile Arg Leu Ser Ala Gly Gly 
            100                 105                 110         


Asp Ile Trp Val Thr Arg Glu Pro Tyr Val Ser Cys Asp Pro Asn Lys 
        115                 120                 125             


Cys Tyr Gln Phe Ala Leu Gly Gln Gly Thr Thr Leu Asn Asn Arg His 
    130                 135                 140                 


Ser Asn Asp Thr Val His Asp Arg Thr Pro Tyr Arg Thr Leu Leu Met 
145                 150                 155                 160 


Asn Glu Leu Gly Val Pro Phe His Leu Gly Thr Lys Gln Val Cys Ile 
                165                 170                 175     


Ala Trp Ser Ser Ser Ser Cys His Asp Gly Lys Ala Trp Leu His Val 
            180                 185                 190         


Cys Val Thr Gly His Asp Glu Asn Ala Thr Ala Ser Phe Ile Tyr Asn 
        195                 200                 205             


Glu Arg Leu Val Asp Ser Ile Gly Ser Trp Ser Lys Lys Ile Leu Arg 
    210                 215                 220                 


Thr Gln Glu Ser Glu Cys Val Cys Ile Asn Gly Thr Cys Thr Val Val 
225                 230                 235                 240 


Met Thr Asp Gly Ser Ala Ser Gly Arg Ala Asp Thr Lys Ile Leu Phe 
                245                 250                 255     


Ile Glu Glu Gly Lys Ile Val His Val Ser Gln Leu Thr Gly Ser Ala 
            260                 265                 270         


Gln His Val Glu Glu Cys Ser Cys Tyr Pro Arg Tyr Pro Gly Val Arg 
        275                 280                 285             


Cys Val Cys Arg Asp Asn Trp Lys Gly Ser Asn Arg Pro Ile Val Asp 
    290                 295                 300                 


Ile Asn Val Lys Asp His Ser Ile Val Ser Ser Tyr Val Cys Ser Gly 
305                 310                 315                 320 


Leu Val Gly Asp Thr Pro Arg Lys Asn Asp Ser Ser Ser Ser Ser Asn 
                325                 330                 335     


Cys Leu Asn Pro Asn Asn Glu Glu Gly Gly His Gly Val Lys Gly Trp 
            340                 345                 350         


Ala Phe Asp Asp Glu Asn Asp Leu Trp Met Gly Arg Thr Ile Ser Glu 
        355                 360                 365             


Lys Leu Arg Leu Gly Tyr Glu Thr Phe Lys Val Ile Glu Gly Trp Ser 
    370                 375                 380                 


Lys Pro Asn Ser Lys Leu Gln Ile Asn Arg Gln Val Ile Val Asp Lys 
385                 390                 395                 400 


Asp Asn Arg Ser Gly Tyr Ser Gly Ile Phe Ser Val Glu Ser Lys Ser 
                405                 410                 415     


Cys Ile Asn Arg Cys Phe Tyr Val Glu Leu Ile Arg Gly Arg Lys Gln 
            420                 425                 430         


Glu Asn Glu Val Trp Trp Thr Ser Asn Ser Ile Val Val Phe Cys Gly 
        435                 440                 445             


Thr Ser Gly Thr Tyr Gly Thr Gly Ser Trp Pro Asp Gly Ala Asp Ile 
    450                 455                 460                 


Asn Leu Met Pro Ile 
465                 


<210>  19
<211>  1410
<212>  DNA
<213>  swine influenza virus

<400>  19
atgaatccaa atcagaagat aataacaatt ggctctgttt ctctcgtcat tgcaacatta       60

tgcttcttaa tgcagatggc catcctaata actactgtaa aattacattt caaacaatat      120

gagtgcggct tccctgcgaa caaccaagta ataacatgtg agccaacagt aatagaaagg      180

aacacaacag agatagtgta cttaactaac accaccatag agaaagaaac atgccacaaa      240

acagtggaat acaggaattg gtcaaagcct caatgcaaaa taacaggctt tgcacctttt      300

tccaaggaca attcaattcg actttctgct ggtggggaca tatgggtgac gagggaacct      360

tacgtgtcat gcgagcctgg caaatgttat cagtttgcac tcgggcaagg gaccacacta      420

gacaataaac attcaaacga tacaatacat gacagaaccc cctatcgaac tctattgatg      480

aatgaattgg gtgtcccatt tcatttaggg acaagacaag tgtgtattgc atggtccagc      540

tcaagttgtt atgatgggaa agcatggttg catgtctgta tcactggaca tgataaaaat      600

gcaactgcca gtttcattta cgatggtaga cttgtagata gcattggttc atggtctaaa      660

aatatactta gaacccagga atcagaatgc gtttgcatca atggggtctg tacagtagta      720

atgactgatg gaagtgcttc gggaagagct gatactaaaa tactattcat tgaagaaggg      780

aaaattgttc atattagccc attagcgggg agtgcacagc atgtggagga gtgctcctgt      840

tatccccgat atcctggcgt aaggtgtatc tgcagagaca actggaaagg ctctaacaga      900

cccgttgtgg atataaatat agaagattat agcattgatt ccagttatgt gtgttcaggg      960

cttgttggcg acacacccag aatcaatgac ggatccagta gtagctactg ccgtgatcct     1020

aacaacgaaa aaggaaatca cggagtgaag ggctgggctt ttgacgatgg aaatgatgtg     1080

tggatgggaa gaacgatcaa cgaagattca cgctcaggtt atgaaacatt caaagtcatt     1140

ggtggttggt ccactcctaa ttccaaattg cagataaata ggcaagtaat agttgatagc     1200

aacaataggt caggttattc tggtgttttc tccgttgaag gcaaaagctg catcaataga     1260

tgtttctacg tggagttgat aagaggaaga aggtcagaag cgcgagtatg gtggacctca     1320

aacagtattg ttgtattttg tggcacttca ggtacctatg gaacaggctc atggcctgat     1380

ggagcagaca tcaacctcat gcctatatga                                      1410


<210>  20
<211>  469
<212>  PRT
<213>  swine influenza virus

<400>  20

Met Asn Pro Asn Gln Lys Ile Ile Thr Ile Gly Ser Val Ser Leu Val 
1               5                   10                  15      


Ile Ala Thr Leu Cys Phe Leu Met Gln Met Ala Ile Leu Ile Thr Thr 
            20                  25                  30          


Val Lys Leu His Phe Lys Gln Tyr Glu Cys Gly Phe Pro Ala Asn Asn 
        35                  40                  45              


Gln Val Ile Thr Cys Glu Pro Thr Val Ile Glu Arg Asn Thr Thr Glu 
    50                  55                  60                  


Ile Val Tyr Leu Thr Asn Thr Thr Ile Glu Lys Glu Thr Cys His Lys 
65                  70                  75                  80  


Thr Val Glu Tyr Arg Asn Trp Ser Lys Pro Gln Cys Lys Ile Thr Gly 
                85                  90                  95      


Phe Ala Pro Phe Ser Lys Asp Asn Ser Ile Arg Leu Ser Ala Gly Gly 
            100                 105                 110         


Asp Ile Trp Val Thr Arg Glu Pro Tyr Val Ser Cys Glu Pro Gly Lys 
        115                 120                 125             


Cys Tyr Gln Phe Ala Leu Gly Gln Gly Thr Thr Leu Asp Asn Lys His 
    130                 135                 140                 


Ser Asn Asp Thr Ile His Asp Arg Thr Pro Tyr Arg Thr Leu Leu Met 
145                 150                 155                 160 


Asn Glu Leu Gly Val Pro Phe His Leu Gly Thr Arg Gln Val Cys Ile 
                165                 170                 175     


Ala Trp Ser Ser Ser Ser Cys Tyr Asp Gly Lys Ala Trp Leu His Val 
            180                 185                 190         


Cys Ile Thr Gly His Asp Lys Asn Ala Thr Ala Ser Phe Ile Tyr Asp 
        195                 200                 205             


Gly Arg Leu Val Asp Ser Ile Gly Ser Trp Ser Lys Asn Ile Leu Arg 
    210                 215                 220                 


Thr Gln Glu Ser Glu Cys Val Cys Ile Asn Gly Val Cys Thr Val Val 
225                 230                 235                 240 


Met Thr Asp Gly Ser Ala Ser Gly Arg Ala Asp Thr Lys Ile Leu Phe 
                245                 250                 255     


Ile Glu Glu Gly Lys Ile Val His Ile Ser Pro Leu Ala Gly Ser Ala 
            260                 265                 270         


Gln His Val Glu Glu Cys Ser Cys Tyr Pro Arg Tyr Pro Gly Val Arg 
        275                 280                 285             


Cys Ile Cys Arg Asp Asn Trp Lys Gly Ser Asn Arg Pro Val Val Asp 
    290                 295                 300                 


Ile Asn Ile Glu Asp Tyr Ser Ile Asp Ser Ser Tyr Val Cys Ser Gly 
305                 310                 315                 320 


Leu Val Gly Asp Thr Pro Arg Ile Asn Asp Gly Ser Ser Ser Ser Tyr 
                325                 330                 335     


Cys Arg Asp Pro Asn Asn Glu Lys Gly Asn His Gly Val Lys Gly Trp 
            340                 345                 350         


Ala Phe Asp Asp Gly Asn Asp Val Trp Met Gly Arg Thr Ile Asn Glu 
        355                 360                 365             


Asp Ser Arg Ser Gly Tyr Glu Thr Phe Lys Val Ile Gly Gly Trp Ser 
    370                 375                 380                 


Thr Pro Asn Ser Lys Leu Gln Ile Asn Arg Gln Val Ile Val Asp Ser 
385                 390                 395                 400 


Asn Asn Arg Ser Gly Tyr Ser Gly Val Phe Ser Val Glu Gly Lys Ser 
                405                 410                 415     


Cys Ile Asn Arg Cys Phe Tyr Val Glu Leu Ile Arg Gly Arg Arg Ser 
            420                 425                 430         


Glu Ala Arg Val Trp Trp Thr Ser Asn Ser Ile Val Val Phe Cys Gly 
        435                 440                 445             


Thr Ser Gly Thr Tyr Gly Thr Gly Ser Trp Pro Asp Gly Ala Asp Ile 
    450                 455                 460                 


Asn Leu Met Pro Ile 
465                 


<210>  21
<211>  1410
<212>  DNA
<213>  swine influenza virus

<400>  21
atgaatccaa accagaaaat aataacgatc ggttctgtct ccttgatcat tgcaacaatg       60

tgctttttca tgcaagttgc cattctggta actactgtaa cattgcattt caggcagtgc      120

gaatgcaact cctccgcaac caaccaaata atgccatgta aaccaacaaa aatagagaga      180

aacataactg aaattgtgta cttaaccaat accaccataa aaacagaggt atgccccaaa      240

ctagtgaaat acagggattg ggcaaaacca caatgtagaa tcacagggtt tgcacctttt      300

tccaaggaca attcgattcg gctttctgcc ggtggggcca tttgggtaac gagagaaccc      360

tatgtatcat gcgatcttag caagtgttac cagtttgcgc tcggacaggg gactacacta      420

gacaacagac attcaaatga cacaatacat gatagaactc cttatcggac cctattgatg      480

aatgaattgg gtgttccatt tcatttagga accaggcaag tgtgtatagc ttggtccagt      540

tcaagttgtc acgatggaaa agcatggctg catgtttgtg tcactgggta tgataaaaat      600

gctactgcta gcctcattta tgacggaagg cttgtggaca gcatcggttc atggtcccaa      660

aacatcctcc ggacccagga atcggaatgt gtttgtataa atggtacttg cacagtggta      720

atgactgatg ggagtgcttc aggaaaagct gataccagaa tactatttat tgaagaaggg      780

aagattattc acattagtcc attgacagga agtgcacagc atgttgaaga gtgttcttgt      840

tatcctcgat accccggtgt aagatgtgtt tgtagagaca actggaaggg ctctaacaga      900

cccgtcgtgg atataaatgt aaaagattat aaaattaact ccagttatgt atgctcaggc      960

cttgttggcg atacacccag aaacaacgat agatctagca atagcaactg ccaaaatcct     1020

aacaaccaga gagggaatca tggagtgaag ggctgggcct ttgacgatgg aaatgacata     1080

tggatgggaa gaaccatcag caatgattca cgtttaggtt atgaaacttt caaagttatt     1140

ggtggttggt ccaaacccaa ctccaaagtt cagacaaata ggcaagtcat agttgacagc     1200

gataatagat caggttattc tggcgttttc tctgttgaag gcaaaagctg catcaatagg     1260

tgcttttatg tagagctaat aagaggaagg agacaggaag ctagagtatg gtggacttcg     1320

aacagtattg ttgtgttttg tggtacttcg ggtacatatg gttcaggctc atggcctgat     1380

ggggctgaca tcaatcttat gcctatataa                                      1410


<210>  22
<211>  469
<212>  PRT
<213>  swine influenza virus

<400>  22

Met Asn Pro Asn Gln Lys Ile Ile Thr Ile Gly Ser Val Ser Leu Ile 
1               5                   10                  15      


Ile Ala Thr Met Cys Phe Phe Met Gln Val Ala Ile Leu Val Thr Thr 
            20                  25                  30          


Val Thr Leu His Phe Arg Gln Cys Glu Cys Asn Ser Ser Ala Thr Asn 
        35                  40                  45              


Gln Ile Met Pro Cys Lys Pro Thr Lys Ile Glu Arg Asn Ile Thr Glu 
    50                  55                  60                  


Ile Val Tyr Leu Thr Asn Thr Thr Ile Lys Thr Glu Val Cys Pro Lys 
65                  70                  75                  80  


Leu Val Lys Tyr Arg Asp Trp Ala Lys Pro Gln Cys Arg Ile Thr Gly 
                85                  90                  95      


Phe Ala Pro Phe Ser Lys Asp Asn Ser Ile Arg Leu Ser Ala Gly Gly 
            100                 105                 110         


Ala Ile Trp Val Thr Arg Glu Pro Tyr Val Ser Cys Asp Leu Ser Lys 
        115                 120                 125             


Cys Tyr Gln Phe Ala Leu Gly Gln Gly Thr Thr Leu Asp Asn Arg His 
    130                 135                 140                 


Ser Asn Asp Thr Ile His Asp Arg Thr Pro Tyr Arg Thr Leu Leu Met 
145                 150                 155                 160 


Asn Glu Leu Gly Val Pro Phe His Leu Gly Thr Arg Gln Val Cys Ile 
                165                 170                 175     


Ala Trp Ser Ser Ser Ser Cys His Asp Gly Lys Ala Trp Leu His Val 
            180                 185                 190         


Cys Val Thr Gly Tyr Asp Lys Asn Ala Thr Ala Ser Leu Ile Tyr Asp 
        195                 200                 205             


Gly Arg Leu Val Asp Ser Ile Gly Ser Trp Ser Gln Asn Ile Leu Arg 
    210                 215                 220                 


Thr Gln Glu Ser Glu Cys Val Cys Ile Asn Gly Thr Cys Thr Val Val 
225                 230                 235                 240 


Met Thr Asp Gly Ser Ala Ser Gly Lys Ala Asp Thr Arg Ile Leu Phe 
                245                 250                 255     


Ile Glu Glu Gly Lys Ile Ile His Ile Ser Pro Leu Thr Gly Ser Ala 
            260                 265                 270         


Gln His Val Glu Glu Cys Ser Cys Tyr Pro Arg Tyr Pro Gly Val Arg 
        275                 280                 285             


Cys Val Cys Arg Asp Asn Trp Lys Gly Ser Asn Arg Pro Val Val Asp 
    290                 295                 300                 


Ile Asn Val Lys Asp Tyr Lys Ile Asn Ser Ser Tyr Val Cys Ser Gly 
305                 310                 315                 320 


Leu Val Gly Asp Thr Pro Arg Asn Asn Asp Arg Ser Ser Asn Ser Asn 
                325                 330                 335     


Cys Gln Asn Pro Asn Asn Gln Arg Gly Asn His Gly Val Lys Gly Trp 
            340                 345                 350         


Ala Phe Asp Asp Gly Asn Asp Ile Trp Met Gly Arg Thr Ile Ser Asn 
        355                 360                 365             


Asp Ser Arg Leu Gly Tyr Glu Thr Phe Lys Val Ile Gly Gly Trp Ser 
    370                 375                 380                 


Lys Pro Asn Ser Lys Val Gln Thr Asn Arg Gln Val Ile Val Asp Ser 
385                 390                 395                 400 


Asp Asn Arg Ser Gly Tyr Ser Gly Val Phe Ser Val Glu Gly Lys Ser 
                405                 410                 415     


Cys Ile Asn Arg Cys Phe Tyr Val Glu Leu Ile Arg Gly Arg Arg Gln 
            420                 425                 430         


Glu Ala Arg Val Trp Trp Thr Ser Asn Ser Ile Val Val Phe Cys Gly 
        435                 440                 445             


Thr Ser Gly Thr Tyr Gly Ser Gly Ser Trp Pro Asp Gly Ala Asp Ile 
    450                 455                 460                 


Asn Leu Met Pro Ile 
465                 


<210>  23
<211>  1410
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Codon optimized swine influenza virus sequence

<400>  23
atgaacccta accagaagat tattaccatc ggatccgtgt gcatgaccat cggaatggcc       60

aacctgatcc tgcaaatcgg aaacatcatc tccatctgga ttagccatag cattcagctt      120

ggaaaccaga gccagatcga gacttgtaac cagtccgtga tcacctacga gaacaacacc      180

tgggtcaacc agacttacgt caatatcagc aacaccaact tcgctgcggg gcagtccgtg      240

gtgtccgcaa agctggccgg caacagctcc ctgtgccccg tgtccggatg ggcgatctac      300

tccaaggata acagcgtgcg catcgggtcc aaaggggacg tgttcgtcat ccgcgaacca      360

ttcatttctt gctccccctt ggaatgtcgg accttcttcc tgacccaagg ggcgttgctc      420

aacgacaagc acagcaacgg aaccatcaaa gatcggtcgc cctaccgcac tctgatgtcg      480

tgccctatcg gcgaagtgcc atccccctac aactcacgct tcgagtccgt ggcctggtcc      540

gcttccgcct gccacgatgg aatcaactgg ctcacaatcg gcatctccgg cccggactcg      600

ggagccgtgg ccgtgctgaa gtacaatggt attattactg acactatcaa gtcgtggaag      660

aacaatattc tccggactca agaatctgaa tgcgcctgcg tgaacggttc ctgcttcact      720

atcatgaccg acggcccttc cgatggacag gcctcataca agatcttccg gatcgagaag      780

ggaaagatcg tgaagtccgt cgagatgaac gcaccgaact accattatga ggaatgctcg      840

tgctacccgg actcctcgga aattacttgc gtgtgccgcg acaattggca cgggtccaac      900

aggccctggg tgtccttcaa ccaaaacctg gagtaccaga tcggttacat ctgctccggg      960

atttttggag acaaccctag acctaacgac aagaccggct catgcggacc tgtgtcctcc     1020

aacggagcca acggcgtgaa gggattctcg ttcaaatatg ggaacggcgt ctggataggt     1080

cggaccaagt ccatctcgtc acggaagggc tttgaaatga tttgggaccc gaacggttgg     1140

accggaaccg acaagaactt cagcatcaag caggacatta tcggcattaa cgagtggagc     1200

ggatactcgg gcagcttcgt ccagcacccg gaacttacgg gcctcaattg tattaggccc     1260

tgtttttggg tcgagctgat tagagggcgc cccaaggaaa acaccatctg gaccagcggc     1320

tccagcatct cattctgcgg agtgaactcc gacaccgtgg gctggtcgtg gcccgacggt     1380

gccgagctgc cgttcaccat cgataaatga                                      1410


<210>  24
<211>  1410
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Codon optimized swine influenza virus sequence

<400>  24
atgaatccta accaaaagat catcaccatc ggctccgtca gcctcactat taccaccatg       60

tgcctgttcc ttcaaattgc catcctcgtg accacgatca ccctgcactt caagcagtac      120

gagtgcgact ccccggccaa caaccaggtc atcccgtgtg aaccgattat cattgagaag      180

aacatcacaa agattgtgta cctgactaac accaccatcg agaaggaagt ctgcccaaaa      240

ttgggagagt accggaactg gtccaagcct caatgcaaaa tcactggatt tgctccgttc      300

agcaaggata actcaatcag actgagcgcg ggtggcgcca tctgggtcac cagggaacct      360

tatgtgtcgt gcgatcccaa caagtgctac cagtttgcgc tgggccaggg caccaccctc      420

gacaaccgcc actccaacga caccatccat gatcgcaccc ctttccgaac cctgctgatg      480

agcgagcttg gcgtgccctt ccacctcgga acgcgccaag tctgtattgc ctggagctcg      540

tcctcctgcc acgatggaaa ggcctggctg catgtctgtg tgactggtca cgacaagaac      600

gccaccgcta gcttcatcta tgacggaaaa ttggtggatt ccatctcctc ctggtctaag      660

aacattctgc ggacccagga atccgaatgc gtgtgcatcg atggcatctg cactgtggtc      720

atgactgacg gatccgcaag cggaaaggcg gacactaaga tcctgtttat cgaaaaggga      780

aagatcattc atatctcgcc gctgctgggg tccgcccagc acgtggaaga gtgcagctgt      840

tacccccggt accccgacgt gcggtgcatt tgtcgggaca actggaaggg tagcaacagg      900

cccatcgtgg acattcgcat gaagaattac tcaatcggat cctcctacat gtgctcaggg      960

ctcgtgggag acacccccag gaacaacgac ggttcctcaa actccaactg tcggaacccg     1020

aacaatgagc gcgggaatca cggagtgaag ggatgggcat tcgacgacgg aaacgacacc     1080

tggatgggtc ggactatcag caaggactcc cgcctgggtt acgaaacttt caaggtcgtg     1140

gggggctggt cgcagccaaa ctcgaagtcg cagattaaca gacaggtcat cgtggactcc     1200

gacaataggt ccggctactc cggaatcttc tcggtcgagg ggaaggattg cattaaccgg     1260

tgcttctacg tggagctgat cagaggcaga cgccaggaaa cccgcgtgtg gtggacctcc     1320

aactcaatcg tggtgttctg cggaacatcc ggcacttacg gcagcggatc ctggcctgat     1380

ggcgccaaca taaacttcat gcccgtgtga                                      1410


<210>  25
<211>  1410
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Codon optimized swine influenza virus sequence

<400>  25
atgaacccca accaaaagat cattacaatc ggatcagtgt cacttgtgat cgccaccttg       60

tgtttcctca tgcaaatggc cattctgatc accactgtga agctgcactt caaacagtat      120

gagtgcggat tcccggcgaa caatcaggtc atcacctgtg aacctaccgt gatcgagcgg      180

aacaccaccg agatagtgta cctgaccaat acgactatcg aaaaggaaac ttgccataag      240

accgtcgagt accgaaactg gtcgaagccg cagtgcaaga tcactgggtt cgcaccgttc      300

agcaaggata acagcatccg gctgtccgcc gggggagaca tttgggtcac ccgcgaaccg      360

tacgtgtcgt gcgagcccgg aaagtgctac cagttcgccc tgggccaggg taccaccctg      420

gataacaagc acagcaacga taccatccac gataggaccc cctaccggac tctgctgatg      480

aacgaactgg gcgtgccttt tcacctcggc acgagacaag tctgcattgc ctggtcctca      540

tcgtcctgct acgacggaaa ggcctggctg cacgtctgca tcaccggcca tgacaaaaac      600

gccaccgcgt ccttcatcta cgacggtcgc ctggtggact ccattggatc ctggagcaag      660

aacattctgc ggacccagga atcggaatgc gtgtgtatca acggagtgtg caccgtcgtg      720

atgactgatg gctctgcttc cggccgggcc gacaccaaga tcttgtttat cgaagaaggg      780

aagattgtcc acatttcccc gcttgctgga tccgcgcagc acgtggaaga gtgcagctgt      840

tacccccgct accctggcgt gcggtgcatt tgtcgggaca actggaaggg atccaatagg      900

cccgtggtgg acatcaacat cgaagattac tcgattgact ccagctacgt gtgctccggc      960

ctcgtcgggg acactccccg catcaacgac gggtcgagct cctcctattg ccgggatcca     1020

aacaacgaga aggggaacca cggcgtgaag ggctgggctt tcgacgacgg aaacgacgtc     1080

tggatgggta gaactatcaa cgaggattcc cggagcggat acgagacttt caaggtcatc     1140

ggtggttggt caacccctaa tagcaaactc cagattaaca gacaggtcat cgtggactcg     1200

aacaatcgga gcggctactc cggagtgttc tccgtggaag gaaagtcgtg catcaaccgg     1260

tgcttctacg tggagctgat taggggtcgc cgcagcgaag cccgcgtgtg gtggacttcc     1320

aactcaatcg tggtgttctg cggcacctcc gggacttacg gaaccggatc ctggccggat     1380

ggcgccgaca ttaacctgat gccaatttga                                      1410


<210>  26
<211>  1410
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Codon optimized swine influenza virus sequence

<400>  26
atgaacccca accaaaagat cattacaatc ggatcagtgt cacttgtgat cgccaccttg       60

tgtttcctca tgcaaatggc cattctgatc accactgtga agctgcactt caaacagtat      120

gagtgcggat tcccggcgaa caatcaggtc atcacctgtg aacctaccgt gatcgagcgg      180

aacaccaccg agatagtgta cctgaccaat acgactatcg aaaaggaaac ttgccataag      240

accgtcgagt accgaaactg gtcgaagccg cagtgcaaga tcactgggtt cgcaccgttc      300

agcaaggata acagcatccg gctgtccgcc gggggagaca tttgggtcac ccgcgaaccg      360

tacgtgtcgt gcgagcccgg aaagtgctac cagttcgccc tgggccaggg taccaccctg      420

gataacaagc acagcaacga taccatccac gataggaccc cctaccggac tctgctgatg      480

aacgaactgg gcgtgccttt tcacctcggc acgagacaag tctgcattgc ctggtcctca      540

tcgtcctgct acgacggaaa ggcctggctg cacgtctgca tcaccggcca tgacaaaaac      600

gccaccgcgt ccttcatcta cgacggtcgc ctggtggact ccattggatc ctggagcaag      660

aacattctgc ggacccagga atcggaatgc gtgtgtatca acggagtgtg caccgtcgtg      720

atgactgatg gctctgcttc cggccgggcc gacaccaaga tcttgtttat cgaagaaggg      780

aagattgtcc acatttcccc gcttgctgga tccgcgcagc acgtggaaga gtgcagctgt      840

tacccccgct accctggcgt gcggtgcatt tgtcgggaca actggaaggg atccaatagg      900

cccgtggtgg acatcaacat cgaagattac tcgattgact ccagctacgt gtgctccggc      960

ctcgtcgggg acactccccg catcaacgac gggtcgagct cctcctattg ccgggatcca     1020

aacaacgaga aggggaacca cggcgtgaag ggctgggctt tcgacgacgg aaacgacgtc     1080

tggatgggta gaactatcaa cgaggattcc cggagcggat acgagacttt caaggtcatc     1140

ggtggttggt caacccctaa tagcaaactc cagattaaca gacaggtcat cgtggactcg     1200

aacaatcgga gcggctactc cggagtgttc tccgtggaag gaaagtcgtg catcaaccgg     1260

tgcttctacg tggagctgat taggggtcgc cgcagcgaag cccgcgtgtg gtggacttcc     1320

aactcaatcg tggtgttctg cggcacctcc gggacttacg gaaccggatc ctggccggat     1380

ggcgccgaca ttaacctgat gccaatttga                                      1410


<210>  27
<211>  1410
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Codon optimized swine influenza virus sequence

<400>  27
atgaacccca accagaagat tatcaccatc ggatccgtgt ctctcatcat cgccaccatg       60

tgcttcttta tgcaagtggc cattctcgtc accactgtga ccctgcactt tcggcagtgc      120

gaatgcaact cctccgctac taaccaaatt atgccgtgca agcctactaa gatcgaacgg      180

aacatcaccg agatcgtgta cttgacgaac accaccatca agaccgaagt ctgcccgaag      240

cttgtgaaat atcgggactg ggcgaagcca caatgtcgca tcaccggttt cgccccgttc      300

agcaaagata acagcattcg gctgtccgcc gggggcgcga tctgggtcac cagggagccg      360

tacgtgtcgt gtgatctgtc caagtgctac caattcgcac tgggacaggg taccaccctc      420

gacaaccgcc actccaacga taccatacat gaccggaccc cttaccgcac tctcttgatg      480

aacgagctgg gagtgccctt ccacctgggt accagacaag tctgcattgc ctggtcctca      540

tcctcctgcc atgacgggaa ggcctggctg catgtctgcg tgactggcta cgataagaac      600

gcgacggcct ccctgatcta cgacggtcgc ctggtggact ccattgggtc gtggagccag      660

aatatcctgc ggactcagga gtcagaatgc gtgtgcatca acggcacttg caccgtggtc      720

atgactgacg gatccgcctc ggggaaggcc gacaccagga tcctgttcat tgaggaggga      780

aagattatcc acatctcgcc tctgactgga tccgcccagc acgtggaaga gtgttcctgc      840

taccctcgat accccggcgt gcgctgtgtg tgtcgggata actggaaggg aagcaaccgg      900

cccgtggtgg acattaacgt gaaggactac aagattaact catcatacgt gtgctccgga      960

ctcgtgggcg atacaccaag aaacaacgac cgcagcagca acagcaattg tcagaacccc     1020

aacaaccagc gcggcaacca cggcgtgaag ggctgggcat tcgacgacgg aaatgacatc     1080

tggatgggga ggactatctc caacgattca cgcctgggct acgaaacctt caaggtcatc     1140

ggcggctggt caaaaccgaa ctccaaggtc cagaccaaca gacaggtcat cgtggattcg     1200

gacaatagaa gcggatacag cggagtgttc agcgtggagg gaaagtcgtg catcaaccgc     1260

tgcttctacg tggaactgat caggggtcgg agacaggaag cgcgcgtgtg gtggacttcg     1320

aactcgattg tggtgttctg cggtacctcc ggaacctatg ggagcggatc ctggccggac     1380

ggcgctgaca ttaaccttat gccgatctga                                      1410


