                         SEQUENCE LISTING

<110>  BioNTech RNA Pharmaceuticals GmbH et al.
 
<120>  METHODS FOR CHARACTERIZING LOSS OF ANTIGEN PRESENTATION

<130>  674-214 PCT

<160>  26    

<170>  PatentIn version 3.5

<210>  1
<211>  701
<212>  DNA
<213>  Homo sapiens

<400>  1
ccctaaggaa ctgatatctc accttctcaa tccggtataa tacccgaagc ctctgactgc       60

ttgcagcttc tatatcctag gagaagggag tcaccagcta tcagctacac tgccactgcc      120

acagccctag cccaggcccc caactagcta gagattgagc tggaaaggct agaaacaaag      180

tctgatcaca cttcttcctc cttcttcggt cacagtctta aacacaagaa tgttctagac      240

ccttcttcca aaggggagag aaaaatgtct gggaagatag tgctcccacc tgctcttgag      300

ttccatgggg taccgcatca atagctcggc gagggctgaa gcatgtcgac acagctacct      360

ggcccaggga accctcgatt cggaccactg catgagaaga gaggcacatt tccttccccc      420

tcccacactc tgtccaccca gatgcccagc ccaagtcagc aggtcagccc tgaccctacc      480

ggactcataa gcctctgcct tcggaatgta aggcgttacc agcttgaggg actcaacccg      540

gtttcttcgt ccaagtagct cttcgtctgc ctgcttcttc tctagcttct ggtaatattc      600

ctgagaatgc acggaatagg aaacaaaaaa acaaaacacc ttatattcat cttttgaatt      660

tagaattaag tttctcaagt gcagcctctt aagtttagtt t                          701


<210>  2
<211>  601
<212>  DNA
<213>  Homo sapiens

<400>  2
tctccaagtg aggtcgaagt tttgccctag accctgtagg acatctatat acctatcagg       60

atcatctgaa aacttcccca gatctacctt gatctgcttt aaatcagaga gggagaaggg      120

gacatgtacc caggttgggc caaattcccc tccccctaca gcttgaaaag aacataacca      180

atagcccaga ggtttttgtg gccccttgga gatttctttg cttgtttcct tctgggtggg      240

ggagattaga ggaggctcat cattaatagg aagaggagct gtagggaggc taggatatgg      300

gggtaagctg agaggtcctc ctgtggaatg taggttgcaa gctttgcata gttgtggatt      360

gtccttcagt gaaaagaaag cttggacata aggtatttca ctccatttgc cttccatctt      420

acagaaaaag tcaagctgca ggataatact gtaatttata ctttccacag gtggccattt      480

ttccctatca gagagagaat attgggacca ggccacagtg cagaaaaaaa taagcctctt      540

ctttttcagg gcttgcaggt caaattcatc ccaatggctt aggatgcatt tcaagtgtga      600

g                                                                      601


<210>  3
<211>  601
<212>  DNA
<213>  Homo sapiens

<400>  3
ccacctgagg gacgtataaa ttacaatagt atcctgcagc ttgaactttt ctgtaagaag       60

gaaggcaagt ggagtgaaat accttatgtc caagctttct tttcactgaa ggacaatcca      120

caactatgca aagcttgcaa tctacattcc acaggaggac ctctcagctt acccccatat      180

cctagcctcc ttacagctcc tcttccttcc tattaatgat gagcctcctc taatctcccc      240

cacccagaag gaaacaagca aagaaatctc caagggacca caaaaaaccc gctataggtt      300

atgtcctctt caagctgtag ggggagggga atttggccca acccgggtac aagtcccctt      360

ctccctctct gatttaaagc agatcaagtt agatctgggg aagttttcag gtgatcctga      420

taggtatata gatatcctat ggggtctagg gcaaaccttc gacctcactt ggagagatgt      480

catgctattg ttttgttgct gttgttgttg ttttgagatg gagtttcact ctgttgccca      540

ggctggagtg cagtggcaca atctcagctc actgcaagct ccacttcccg ggttcacacc      600

a                                                                      601


<210>  4
<211>  700
<212>  DNA
<213>  Homo sapiens

<400>  4
ccctaaggaa ctgatatctc accttctcaa tccggtataa tacccgaagc ctctgactgc       60

ttgcagcttc tatatcctag gagaagggag tcaccagcta tcagctacac tgccactgcc      120

acagccctag cccaggcccc caactagcta gagattgagc tggaaaggct agaaacaaag      180

tctgatcaca cttcttcctc cttcttcggt cacagtctta aacacaagaa tgttctagac      240

ccttcttcca aaggggagag aaaaatgtct gggaagatag tgctcccacc tgctcttgag      300

ttccatgggg taccgcatca atagctcggc gagggctgaa gcatgtcgac acagctacct      360

ggcccaggga accctcgatt cggaccactg catgagaaga aacctatagc gggttttttg      420

tggtcccttg gagatttctt tgcttgtttc cttctgggtg ggggagatta gaggaggctc      480

atcattaata ggaaggaaga ggagctgtaa ggaggctagg atatgggggt aagctgagag      540

gtcctcctgt ggaatgtaga ttgcaagctt tgcatagttg tggattgtcc ttcagtgaaa      600

agaaagcttg gacataaggt atttcactcc acttgccttc cttcttacag aaaagttcaa      660

gctgcaggat actattgtaa tttatacgtc cctcaggtgg                            700


<210>  5
<211>  603
<212>  DNA
<213>  Homo sapiens

<400>  5
ctcacacttg aaatgcatcc taagccattg ggatgaattt gacctgcaag ccctgaaaaa       60

gaagaggctt atttttttct gcactgtggc ctggtcccaa tattctctct ctgataggga      120

aaaatggcca cctgtggaaa gtataaatta cagtattatc ctgcagcttg actttttctg      180

taagatggaa ggcaaatgga gtgaaatacc ttatgtccaa gctttctttt cactgaagga      240

caatccacaa ctatgcaaag cttgcaacct acattccaca ggaggacctc tcagcttacc      300

ccatgtcctc ttcaagctgt agggggaggg gaatttggcc caacccgggt acaagtcccc      360

ttctccctct ctgatttaaa gcagatcaag ttagatctgg ggaagttttc aggtgatcct      420

gataggtata tagatatcct atggggtcta gggcaaacct tcgacctcac ttggagagat      480

gtcatgctat tgttttgttg ctgttgttgt tgttttgaga tggagtttca ctctgttgcc      540

caggctggag tgcagtggca caatctcagc tcactgcaag ctccacttcc cgggttcaca      600

cca                                                                    603


<210>  6
<211>  701
<212>  DNA
<213>  Homo sapiens


<220>
<221>  repeat_unit
<222>  (401)..(401)
<223>  Nucleotide repeated n times, wherein n is an integer from 0 to 5,
       preferably 0 or 1

<400>  6
ccctaaggaa ctgatatctc accttctcaa tccggtataa tacccgaagc ctctgactgc       60

ttgcagcttc tatatcctag gagaagggag tcaccagcta tcagctacac tgccactgcc      120

acagccctag cccaggcccc caactagcta gagattgagc tggaaaggct agaaacaaag      180

tctgatcaca cttcttcctc cttcttcggt cacagtctta aacacaagaa tgttctagac      240

ccttcttcca aaggggagag aaaaatgtct gggaagatag tgctcccacc tgctcttgag      300

ttccatgggg taccgcatca atagctcggc gagggctgaa gcatgtcgac acagctacct      360

ggcccaggga accctcgatt cggaccactg catgagaaga aaacctatag cgggtttttt      420

gtggtccctt ggagatttct ttgcttgttt ccttctgggt gggggagatt agaggaggct      480

catcattaat aggaaggaag aggagctgta aggaggctag gatatggggg taagctgaga      540

ggtcctcctg tggaatgtag attgcaagct ttgcatagtt gtggattgtc cttcagtgaa      600

aagaaagctt ggacataagg tatttcactc cacttgcctt ccttcttaca gaaaagttca      660

agctgcagga tactattgta atttatacgt ccctcaggtg g                          701


<210>  7
<211>  177
<212>  DNA
<213>  Homo sapiens

<400>  7
tacagcatgt cgacacagct acctggccca gggaaccctc gattcggacc actgcatgag       60

aagaaaatct atagcgggtt ttttgtggtc ccttggagat ttctttgctt gtttccttct      120

gggtggggga gattcgagga ggctcatcta ttcatagcaa gaacagagcg taatact         177


<210>  8
<211>  107
<212>  DNA
<213>  Homo sapiens

<400>  8
ccacccagaa ggaaacaagc aaagaaatct ccaagggacc acaaaaaacc cgctataggt       60

tttcttctca tgcagtggtc cgaatcgagg gttccctggg ccaggta                    107


<210>  9
<211>  11
<212>  DNA
<213>  Homo sapiens


<220>
<221>  repeat_unit
<222>  (6)..(6)
<223>  Nucleotide repeated n times, wherein n is an integer from 0 to 5,
       preferably 0 or 1

<400>  9
aggttttctt c                                                            11


<210>  10
<211>  11
<212>  DNA
<213>  Homo sapiens

<400>  10
aggttttctt c                                                            11


<210>  11
<211>  21
<212>  DNA
<213>  Homo sapiens


<220>
<221>  repeat_unit
<222>  (11)..(11)
<223>  Nucleotide repeated n times, wherein n is an integer from 0 to 5,
       preferably 0 or 1

<400>  11
gctataggtt ttcttctcat g                                                 21


<210>  12
<211>  21
<212>  DNA
<213>  Homo sapiens

<400>  12
gctataggtt ttcttctcat g                                                 21


<210>  13
<211>  41
<212>  DNA
<213>  Homo sapiens


<220>
<221>  repeat_unit
<222>  (21)..(21)
<223>  Nucleotide repeated n times, wherein n is an integer from 0 to 5,
       preferably 0 or 1

<400>  13
caaaaaaccc gctataggtt ttcttctcat gcagtggtcc g                           41


<210>  14
<211>  41
<212>  DNA
<213>  Homo sapiens

<400>  14
caaaaaaccc gctataggtt ttcttctcat gcagtggtcc g                           41


<210>  15
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Oligonucleotide

<400>  15
agcatgtcga cacagctacc                                                   20


<210>  16
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Oligonucleotide

<400>  16
acctctcagc ttacccccat                                                   20


<210>  17
<211>  94
<212>  DNA
<213>  Homo sapiens

<400>  17
ccacccagaa ggaaacaagc aaagaaatct ccaagggacc acaaaaaacc cgctataggt       60

tttcttctca tgcagtggtc cgaatcgagg gttc                                   94


<210>  18
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Oligonucleotide

<400>  18
gaaccctcga ttcggaccac                                                   20


<210>  19
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Oligonucleotide

<400>  19
ccacccagaa ggaaacaagc                                                   20


<210>  20
<211>  36
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Oligonucleotide

<400>  20
caagggacca caaaaaaccc gctataggtt ttcttc                                 36


<210>  21
<211>  88
<212>  DNA
<213>  Homo sapiens

<400>  21
caagcaaaga aatctccaag ggaccacaaa aaacccgcta taggttttct tctcatgcag       60

tggtccgaat cgagggttcc ctgggcca                                          88


<210>  22
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Oligonucleotide

<400>  22
caagcaaaga aatctccaag gga                                               23


<210>  23
<211>  17
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Oligonucleotide

<400>  23
tggcccaggg aaccctc                                                      17


<210>  24
<211>  37
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Oligonucleotide

<400>  24
cacaaaaaac ccgctatagg ttttcttctc atgcagt                                37


<210>  25
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Oligonucleotide

<400>  25
atgcagcgat accagttgct                                                   20


<210>  26
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Oligonucleotide

<400>  26
ggaaagcacc aaatgccgag                                                   20


