
                                SEQUENCE LISTING

<110> Yan, Ziying
      Engelhardt, John F.
      Qiu, Jianming
      Wang, Zekun
      University of Iowa Research Foundation

<120> BOCAPARVOVIRUS SMALL NONCODING RNA AND USES THEREOF

<130> 875.176WO1

<150> US 62/445,987       
<151> 2017-01-13  

<160> 30

<170> FastSEQ for Windows Version 4.0

<210> 1
<211> 141
<212> DNA
<213> Bocaparvo virus

<400> 1
aagttcctcc tcaatggaca agcggaaagt gaagggtgac tgtagtcctg agctcatggg      60
ttcaagacca cagcccgatg gtagtggtgt taccgtctcg aacctagccg acagcccttg     120
tacattgtgg ggggagctgt t                                               141

<210> 2
<211> 58
<212> DNA
<213> Artificial Sequence

<220> 
<223> A synthetic nucleotide sequence

<400> 2
ccgggctgaa cttcttcatg tatgtctcga gacatacatg aagaagttca gctttttg        58

<210> 3
<211> 57
<212> DNA
<213> Artificial Sequence

<220> 
<223> A synthetic nucleotide sequence

<400> 3
ccggcctaag gttaagtcgc cctcgctcga gcgagggcga cttaacctta ggttttt         57

<210> 4
<211> 20
<212> DNA
<213> Artificial Sequence

<220> 
<223> A synthetic nucleotide sequence

<400> 4
taatacgact cactataggg                                                  20

<210> 5
<211> 19
<212> DNA
<213> Artificial Sequence

<220> 
<223> A synthetic nucleotide sequence

<400> 5
tacagtcacc cttcacttt                                                   19

<210> 6
<211> 19
<212> DNA
<213> Artificial Sequence

<220> 
<223> A synthetic nucleotide sequence

<400> 6
taacaccact accatcggg                                                   19

<210> 7
<211> 19
<212> DNA
<213> Artificial Sequence

<220> 
<223> A synthetic nucleotide sequence

<400> 7
tgtcggctag gttcgagac                                                   19

<210> 8
<211> 19
<212> DNA
<213> Artificial Sequence

<220> 
<223> A synthetic nucleotide sequence

<400> 8
tccccccaca atgtacaag                                                   19

<210> 9
<211> 25
<212> DNA
<213> Artificial Sequence

<220> 
<223> A synthetic nucleotide sequence

<400> 9
caagggctgt cggctaggtt cgaga                                            25

<210> 10
<211> 38
<212> DNA
<213> Artificial Sequence

<220> 
<223> A synthetic nucleotide sequence

<400> 10
ggccacgcgt cgactagtac tttttttttt tttttttv                              38

<210> 11
<211> 25
<212> DNA
<213> Artificial Sequence

<220> 
<223> A synthetic nucleotide sequence

<400> 11
cgagacggta acaccactac catcg                                            25

<210> 12
<211> 20
<212> DNA
<213> Artificial Sequence

<220> 
<223> A synthetic nucleotide sequence

<400> 12
ggccacgcgt cgactagtac                                                  20

<210> 13
<211> 25
<212> DNA
<213> Artificial Sequence

<220> 
<223> A synthetic nucleotide sequence

<400> 13
catcgggctg tggtcttgaa cccat                                            25

<210> 14
<211> 17
<212> DNA
<213> Artificial Sequence

<220> 
<223> A synthetic nucleotide sequence

<400> 14
ctgtaggcac catcaat                                                     17

<210> 15
<211> 17
<212> DNA
<213> Artificial Sequence

<220> 
<223> A synthetic nucleotide sequence

<400> 15
attgatggtg cctacag                                                     17

<210> 16
<211> 25
<212> DNA
<213> Artificial Sequence

<220> 
<223> A synthetic nucleotide sequence

<400> 16
gtgaagggtg actgtagtcc tgagc                                            25

<210> 17
<211> 162
<212> DNA
<213> Adeno virus

<400> 17
gggcactctt ccgtggtctg gtggataaat tcgcaagggt atcatggcgg acgaccgggg      60
ttcgagcccc gtatccggcc gtccgccgtg atccatgcgg ttaccgcccg cgtgtcgaac     120
ccaggtgtgc gacgtcagac aacgggggag agtgctcctt tt                        162

<210> 18
<211> 131
<212> DNA
<213> Bocaparvo virus

<400> 18
aagttcctct ccaatggaca agaggaaaga aaagggtgac tgtaatcccg agctcatgag      60
ttcgaggcta cagtccgatg gcagtggtgt tgccgtctcg aacctagccg ttacaccctt     120
gtgcattgtg g                                                          131

<210> 19
<211> 117
<212> DNA
<213> Bocaparvo virus

<400> 19
aagttcctct ccaatggaca agtggaaaga aaagggtgac tgtaatcccg agctcataag      60
ttcgaggcta cagtccgatg gcagtggtgt tgccgtctcg aacctagccg ttacacc        117

<210> 20
<211> 141
<212> DNA
<213> Bocaparvo virus

<400> 20
aagttcctct ccaatggaca agaggaaaga aaagggtgac tgtaatcccg agctcatgag      60
ttcgaggcta cagtccgatg gcagtggtgt tgccgtctcg aacctagccg gtacaccctt     120
gtgcattgtg ggggagctgt t                                               141

<210> 21
<211> 117
<212> DNA
<213> Bocaparvo virus

<400> 21
aagttcctct ccaatggaca agtggaaaga aaagggtgac tgtaatcccg agctcatgag      60
ttcgaggcta cagtccgatg gcagtggtgt tgccgtctcg aacctagccg ttacacc        117

<210> 22
<211> 83
<212> DNA
<213> Bocaparvo virus

<400> 22
aagttccctt ccaatggaca agtggataga aaagggtgac tgtaatcccg agctcatgag      60
ttcgaggcta cagtccgata gca                                              83

<210> 23
<211> 141
<212> DNA
<213> Bocaparvo virus

<400> 23
aagttcctct ccaatggaca agtggaaaga aaagggtgac tgtaatcccg agctcatgag      60
ttcgaggcta cagtccgatg gcagtggcgt tgccgtctcg aacctagccg atacaccctt     120
gtgcattgtg ggggagctgt t                                               141

<210> 24
<211> 143
<212> DNA
<213> Bocaparvo virus

<400> 24
aagttcctcc tcaatggaca agcggaaagt gaagggtgac tgtagtcctg agctcatggg      60
ttcaagacca cagcccgatg gtagtggtgt taccgtctcg aacctagccg acagcccttg     120
tacattgtgg ggggagctgt ttt                                             143

<210> 25
<211> 5543
<212> DNA
<213> Bocaparvo virus

<400> 25
gtggttgtac agacgccatc ttggaatcca atatgtctgc cggctcagtc atgcctgcgc      60
tgcgcgcagc gcgctgcgcg cgcgcatgat ctaatcgccg gcagacatat tggattccaa     120
gatggcgtct gtacaaccac gtcacatata aaataataaa tattcacaag gaggagtggt     180
tatatgatgt aatccataac cactcccagg aaatgacgta tgatagccaa tcagaattga     240
gtattaaacc tatataagct gctgcacttc ctgattcaat cagactgcat ccggtctccg     300
gcgagtgaac atctctggaa aaagctccac gcttgtggtg agtctactat ggctttcaat     360
cctcctgtga ttagagcttt ttctcaacct gcttttactt atgtcttcaa atttccatat     420
ccacaatgga aagaaaaaga atggctgctt catgcacttt tagctcatgg aactgaacaa     480
tctatgatac aattaagaaa ctgcgctcct catccggatg aagacataat ccgtgatgac     540
ttgcttattt ctttagaaga tcgccatttt ggggctgttc tctgcaaggc tgtttacatg     600
gcaacaacta ctctcatgtc acacaaacaa aggaatatgt ttcctcgttg tgacatcata     660
gttcagtctg agctaggaga gaaaaactta cactgccata ttatagttgg gggagaagga     720
ctaagcaaga ggaatgctaa atcatcctgt gctcagttct atggtttaat actagctgaa     780
ataattcaac gctgcaaatc tcttctggct acacgtcctt ttgaacctga agaggctgac     840
atatttcaca ctttaaaaaa ggctgagcga gaggcatggg gtggagttac tggcggcaac     900
atgcaaatcc ttcaatatag agatcgcaga ggagaccttc atgcacaaac agtggatcct     960
cttcgcttct tcaaaaacta ccttttacct aaaaatagat gtatttcatc ttacagcaaa    1020
cctgatgttt gtacttctcc tgacaactgg ttcattttag ctgaaaaaac ttactctcac    1080
actcttatta acgggctgcc gcttccagaa cattacagaa aaaactacca cgcaacccta    1140
gataacgaag tcattccagg gcctcaaaca atggcctatg gaggacgtgg tccgtgggaa    1200
catcttcctg aggtaggaga tcagcgccta gctgcgtctt ctgttagcac tacttataaa    1260
cctaacaaaa aagaaaaact tatgctaaac ttgctagaca aatgtaaaga gctaaatcta    1320
ttagtttatg aagacttagt agctaattgt cctgaactac tccttatgct tgaaggtcaa    1380
ccaggagggg cacgccttat agaacaagtc ttgggcatgc accatattaa tgtttgttct    1440
aactttacag ctctcacata tctttttcat ctacatcctg ttacttcgct tgactcagac    1500
aataaagctt tacagctttt gttgattcaa ggctataatc ctctagccgt tggtcacgcc    1560
ctatgctgtg tcctgaacaa acaattcggg aaacaaaaca ctgtttgctt ttacgggcct    1620
gcctcaacag gtaaaacaaa tatggccaag gcaatcgtcc aagggattag actttatggg    1680
tgtgttaatc atttgaacaa aggatttgta tttaatgact gcagacaacg cctagttgtt    1740
tggtgggagg agtgcttaat gcaccaggat tgggtggaac ctgcaaagtg tatcttgggc    1800
gggacagaat gcagaattga cgtcaagcat agagacagtg tacttttaac tcaaacacct    1860
gtaattatat ccactaacca cgatatctac gcggttgttg gtggcaattc tgtttctcat    1920
gttcacgcgg ctccattaaa agaaagagtg attcagctaa attttatgaa acaacttcct    1980
caaacatttg gagaaatcac tgctactgag attgcagctc ttctacagtg gtgtttcaat    2040
gagtacgact gtactctgac aggatttaaa caaaaatgga atttagataa aattccaaac    2100
tcatttcctc ttggggtcct ttgtcctact cattcacagg actttacact tcacgaaaac    2160
ggatactgca ctgattgcgg tggttacctt cctcatagtg ctgacaattc tatgtacact    2220
gatcgcgcaa gcgaaactag cacaggagac atcacaccaa gtaagtaaat acgcatgcgc    2280
aagtaattct tttactttca cttcgctatt tttaccaatt tttactttta ggtgacttgg    2340
gggattcgga cggagaagac accaagcctg agacatcgca agtggactat tgtccaccca    2400
agaaacgtcg tctaactgct ccagcaagtc ctccaaactc acctgcgagc tctgtaagta    2460
ctattacttt ctttaacact tggcacgcac agccacgtga cgaagatgag ctcagggaat    2520
atgaaagaca agcatcgctc ctacaaaaga aaagggagtc cagaaagagg ggagaggaag    2580
agacactggc agacaactca tcacaggagc aggagccgca gcccgatccg acacagtggg    2640
gagagaggct cgggctcata tcatcaggaa cacccaatca gccacctatc gtcttgcact    2700
gcttcgaaga cctcagacca agtgatgaag acgagggaga gtacatcggg gaaaaaagac    2760
aatagaacaa atccatacac tgtattcagt caacacagag cttccaatcc tgaagctcca    2820
gggtggtgtg ggttctactg gcactctact cgcattgcta gagatggtac taattcaatc    2880
tttaatgaaa tgaaacaaca gtttcaacag ctacaaattg ataataaaat aggatgggat    2940
aacactagag aactattgtt taatcaaaag aaaacactag atcaaaaata cagaaatatg    3000
ttctggcact ttagaaataa ctctgattgt gaaagatgta attactggga tgatgtgtac    3060
cgtagacact tagctaatgt ttcctcacag acagaagcag acgagataac tgacgaggaa    3120
atgctttctg ctgctgaaag catggaagca gatgcctcca attaagagac agcctagagg    3180
gtgggtgctg cctggataca gatatcttgg gccatttaat ccacttgata acggtgaacc    3240
tgtaaataac gctgatcgcg ctgctcaatt acatgatcac gcctactctg aactaataaa    3300
gagtggtaaa aatccatacc tgtatttcaa taaagctgat gaaaaattca ttgatgatct    3360
aaaagacgat tggtcaattg gtggaattat tggatccagt ttttttaaaa taaagcgcgc    3420
cgtggctcct gctctgggaa ataaagagag agcccaaaaa agacactttt actttgctaa    3480
ctcaaataaa ggtgcaaaaa aaacaaaaaa aagtgaacct aaaccaggaa cctcaaaaat    3540
gtctgacact gacattcaag accaacaacc tgatactgta gacgcaccac agaacacctc    3600
agggggagga acaggaagta ttggaggagg aaaaggatct ggtgtgggga tttccactgg    3660
agggtgggtc ggaggttctc acttttcaga caaatatgtg gttactaaaa acacaagaca    3720
atttataacc acaattcaga atggtcacct ctacaaaaca gaggccattg aaacaacaaa    3780
ccaaagtgga aaatcacagc gctgcgtcac aactccatgg acatacttta actttaatca    3840
atacagctgt cacttctcac cacaggattg gcagcgcctt acaaatgaat ataagcgctt    3900
cagacctaaa gcaatgcaag taaagattta caacttgcaa ataaaacaaa tactttcaaa    3960
tggtgctgac acaacataca acaatgacct cacagctggc gttcacatct tttgtgatgg    4020
agagcatgct tacccaaatg catctcatcc atgggatgag gacgtcatgc ctgatcttcc    4080
atacaagacc tggaaacttt ttcaatatgg atatattcct attgaaaatg aactcgcaga    4140
tcttgatgga aatgcagctg gaggcaatgc tacagaaaaa gcacttctgt atcagatgcc    4200
tttttttcta cttgaaaaca gtgaccacca agtacttaga actggtgaga gcactgaatt    4260
tacttttaac tttgactgtg aatgggttaa caatgaaaga gcatacattc ctcctggact    4320
aatgtttaat ccaaaagttc caacaagaag agttcagtac ataagacaaa acggaagcac    4380
agcagccagc acaggcagaa ttcagccata ctcaaaacca acaagctgga tgacaggacc    4440
tggcctgctc agtgcacaga gagtaggacc acagtcatca gacactgctc cattcatggt    4500
ttgcactaac ccagaaggaa cacacataaa cacaggtgct gcaggatttg gatctggctt    4560
tgatcctcca agcggatgtc tggcaccaac taacctagaa tacaaacttc agtggtacca    4620
gacaccagaa ggaacaggaa ataatggaaa cataattgca aacccatcac tctcaatgct    4680
tagagaccaa ctcctataca aaggaaacca gaccacatac aatctagtgg gggacatatg    4740
gatgtttcca aatcaagtct gggacagatt tcctatcacc agagaaaatc caatctggtg    4800
caaaaaacca agagctgaca aacacacaat catggatcca tttgatggat caattgcaat    4860
ggatcatcct ccaggcacta tttttataaa aatggcaaaa attccagttc caactgcctc    4920
aaatgcagac tcatacctaa acatatactg tactggacaa gtcagctgtg agattgtatg    4980
ggaagtaaaa agatacgcaa caaagaactg gcgtccagaa agaagacata ctgcactcgg    5040
gatgtcactg ggaggagaaa gcaactacac gcctacatac cacgtggatc caacaggagc    5100
atacatccag cccacgtcat atgatcaatg tatgccagta aaaacaaaca tcaataaagt    5160
gttgtaatct tataagcctc ttttttgctt ctgcttacaa gttcctcctc aatggacaag    5220
cggaaagtga agggtgactg tagtcctgag ctcatgggtt caagaccaca gcccgatggt    5280
agtggtgtta ccgtctcgaa cctagccgac agcccttgta cattgtgggg ggagctgttt    5340
tgtttgctta tgcaatcgcg aaactctata tcttttaatg tgttgttgtt gtacatgcgc    5400
catcttagtt ttatatcagc tggcgcctta gttatataac atgcatgtta tataactaag    5460
gcgccagctg atataaaact aagatggcgc atgtacaaca acaacacatt aaaagatata    5520
gagtttcgcg attgcataag caa                                            5543

<210> 26
<211> 138
<212> RNA
<213> Bocaparvo virus

<400> 26
aaguuccucc ucaauggaca agcggaaagu gaagggugac uguaguccug agcucauggg      60
uucaagacca cagcccgaug guaguggugu uccgucucga acuagccgac agcccuugua     120
cauugugggg ggagcugu                                                   138

<210> 27
<211> 19
<212> DNA
<213> Artificial Sequence

<220> 
<223> A synthetic nucleotide sequence

<400> 27
tctgcagctc ccactcgat                                                   19

<210> 28
<211> 25
<212> DNA
<213> Artificial Sequence

<220> 
<223> A synthetic nucleotide sequence

<400> 28
tttgcttcct tcatcacaca gtact                                            25

<210> 29
<211> 11
<212> DNA
<213> Artificial Sequence

<220> 
<223> A synthetic nucleotide sequence

<400> 29
accgtgtccc g                                                           11

<210> 30
<211> 12
<212> DNA
<213> Artificial Sequence

<220> 
<223> A synthetic nucleotide sequence

<221> misc_feature   
<222> (1)...(12)
<223> n = T, C or G

<400> 30
nnnnnnnnnn nn                                                          12
