                         SEQUENCE LISTING

<110>  New England Biolabs, Inc.
 
<120>  ANALYSIS OF CHROMATIN USING A NICKING ENZYME

<130>  NEB-393-PCT

<150>  62/383,151
<151>  2016-09-02

<160>  4     

<170>  PatentIn version 3.5

<210>  1
<211>  399
<212>  PRT
<213>  Legionella pneumophila

<400>  1

Met Lys Ile Tyr Ser Phe Asp Thr Leu Ala Asn Ala Asp Leu Ile Ile 
1               5                   10                  15      


Asp Ala Val Tyr Glu Gly Gly Ser Ser Gly Asn Ala Ser Asp Asp Pro 
            20                  25                  30          


Ile Ser Lys Ile Ile Lys Gly Ile Gly Asn Met Gly Gly Phe Arg Ser 
        35                  40                  45              


Ala Gly Gln Gly Ile Phe Lys Lys Leu Ile Val Leu Tyr Thr Asn Met 
    50                  55                  60                  


Glu Asp Gly Asp Trp Pro Asp Ser Ile Asp Thr Ser Lys Gly Gln Phe 
65                  70                  75                  80  


Ile Tyr Tyr Gly Asp Asn Lys His Pro Gly His Asp Ile His Asp Thr 
                85                  90                  95      


Pro Arg Gln Gly Asn Ala Thr Leu Lys Met Leu Phe Asp Ser Thr His 
            100                 105                 110         


Asn Glu Lys Asp Ala Arg Arg Ile Val Pro Pro Ile Phe Ile Phe Val 
        115                 120                 125             


Lys Tyr Pro Thr Ala Ser Ser Ser Arg Ser Val Gln Phe Lys Gly Val 
    130                 135                 140                 


Ala Val Pro Gly Tyr Pro Gly Leu Ser Ala Thr Asp Asp Leu Ile Ala 
145                 150                 155                 160 


Val Trp Lys Thr Thr Asn Gly Gln Arg Phe Gln Asn Tyr Arg Ala Ile 
                165                 170                 175     


Phe Thr Ile Leu Asn Ile Pro Met Val Ser Arg Lys Trp Ile Asn Ser 
            180                 185                 190         


Leu Phe Asp Pro Phe Gly Gln Asp Asn Ser Leu Asn Pro Phe Tyr Gln 
        195                 200                 205             


Trp Lys Ile Ser Gly Lys Ala Asp Val Leu Ile Ala Pro Ser Thr Lys 
    210                 215                 220                 


Thr Ile Arg Thr Gln Ile Glu Gln Met Pro Arg Thr Lys Leu Glu Arg 
225                 230                 235                 240 


Glu Ile Leu Gln Ala Val Phe Asp Tyr Phe Cys Glu Ala Pro Ile Lys 
                245                 250                 255     


Phe Glu Ala Cys Ala Ala Lys Ile Phe Gln Leu Tyr Asp Glu Asn Val 
            260                 265                 270         


Leu Ile Asp Glu Ile Thr Arg Ser Ala Val Asp Gly Gly Lys Asp Ala 
        275                 280                 285             


Ile Gly Arg Tyr Val Leu Gly Ile Lys Glu Asp Pro Val Tyr Ala Glu 
    290                 295                 300                 


Phe Phe Leu Glu Ala Lys Cys Tyr Gln Pro Gly Leu Asn Gly Gln Asn 
305                 310                 315                 320 


Ile Asn Ser Val Gly Val Lys Glu Val Ser Arg Leu Ile Ser Arg Ile 
                325                 330                 335     


Lys Asn Arg Gln Phe Gly Val Leu Val Thr Thr Ser Phe Ile Ala Lys 
            340                 345                 350         


Gln Ala Tyr Gly Glu Val Arg Glu Asp Gly His Pro Ile Val Phe Leu 
        355                 360                 365             


Ser Gly Gly Asp Ile Ser Arg Ile Leu Ile Lys Lys Gly Ile Asn Ser 
    370                 375                 380                 


Thr Asp Ala Val Leu Ala Trp Leu Asn Ser Glu Phe Ser Lys Ser 
385                 390                 395                 


<210>  2
<211>  159
<212>  PRT
<213>  Nitrolancea hollandica

<400>  2

Met Asn Leu Glu Asn Leu Thr Thr Arg Glu Leu Leu Ala Val Ser Arg 
1               5                   10                  15      


Ala Ser Leu Arg Glu Leu Lys Arg Arg Gly Val Ile Arg Ser Gly Asn 
            20                  25                  30          


Ala Pro Ala Gly Asp Tyr Ala Glu Leu Leu Val Gln Arg Ala Thr Asp 
        35                  40                  45              


Gly Glu Leu Ala Asn Ala Ser Gln Lys Ser Trp Asp Ile Arg Thr Thr 
    50                  55                  60                  


Glu Gly Asp Arg Leu Gln Val Lys Ala Arg Val Ile Thr Asp Glu His 
65                  70                  75                  80  


Ala Asn Gly Glu Arg Gln Leu Ser Thr Ile Arg Ser Trp Asp Phe Asp 
                85                  90                  95      


Ala Ala Val Ile Val Leu Phe Asp Asp Asn Phe Arg Val Trp Arg Ala 
            100                 105                 110         


Ala Arg Val Pro Ala Ala Ile Met Lys Glu Ala Ala Tyr Tyr Ser Gln 
        115                 120                 125             


His Val Arg Gly Tyr Thr Val Tyr Ala Lys Asp Ala Leu Leu Asn His 
    130                 135                 140                 


Ser Glu Val Glu Asp Trp Thr Glu Gln Leu Arg Ser Val Glu Gln 
145                 150                 155                 


<210>  3
<211>  168
<212>  PRT
<213>  Bacillus subtilis

<400>  3

Met Thr Val Ser Leu Lys Lys Leu Asp Asp Leu Glu Leu Thr Leu Leu 
1               5                   10                  15      


Tyr Ser Ser Leu Leu Lys Glu Leu Lys Gln Arg Gly Ile Ile Arg Thr 
            20                  25                  30          


Asn Asn Val Val Gly Glu Leu Gly Glu Tyr Leu Ala Ile Asn Phe Tyr 
        35                  40                  45              


Asn Lys Thr Lys Gly Leu Pro Lys Leu Gln Ala Ala Pro Thr Gly Thr 
    50                  55                  60                  


Gln Asn Ile Asp Ala Leu Ser Ile Lys Gly Asp Arg Tyr Ser Ile Lys 
65                  70                  75                  80  


Thr Thr Thr Gly Ser Val Thr Gly Val Phe Tyr Gly Met Asn Asp Pro 
                85                  90                  95      


Glu Ile Arg Glu Pro Asp Ile Gln Lys Phe Glu Tyr Val Ile Ile Val 
            100                 105                 110         


Leu Phe Asp Lys Glu Tyr Ser Leu Lys Gly Ile Tyr Glu Leu Ser Trp 
        115                 120                 125             


Glu Ser Phe Ile Lys His Lys Arg Trp His Lys Arg Met Arg Ala Trp 
    130                 135                 140                 


Asn Leu Thr Ile Thr Lys Ala Leu Leu Ser Asp Ser Glu Ile Ile Phe 
145                 150                 155                 160 


Glu Lys Glu Ser Lys Leu Leu Asn 
                165             


<210>  4
<211>  162
<212>  PRT
<213>  Pseudomonas amygdali

<400>  4

Met Asn Met Glu Val Gln Asp Asp Val Tyr Glu Ile Leu Arg Glu Ala 
1               5                   10                  15      


Lys Ile Leu Ala Arg Arg Tyr Tyr His Leu Thr Gly Lys Pro Leu Gly 
            20                  25                  30          


Val Thr Gly Glu Val Ala Glu Tyr Glu Val Cys Arg Ile Leu Gly Leu 
        35                  40                  45              


Glu Leu Glu Gln Ala Arg Thr Ala Gly Phe Asp Ala Ile Glu Thr Arg 
    50                  55                  60                  


Asp Gly Val Asp Leu Lys Val Gln Ile Lys Gly Arg Tyr Phe Pro Asn 
65                  70                  75                  80  


Ser Arg Met Arg Gly Gly Arg Leu Gly Ser Ile Asp Leu Lys Gln Pro 
                85                  90                  95      


Phe Asp Ile Val Met Leu Val Leu Leu Asp Gly Asp Tyr Asn Ala Phe 
            100                 105                 110         


Gln Ile Phe Glu Ala Gln Arg Pro Asp Val Glu Ala Ile Leu Thr Arg 
        115                 120                 125             


Pro Gly Ser Lys Ser Arg Asn Glu Arg Gly Ala Val Gly Ile Ser Gln 
    130                 135                 140                 


Phe Lys Ala Ile Ser Ile Leu Arg Trp Glu Arg Glu Gly Val Asp Gln 
145                 150                 155                 160 


Pro Ala 
        


