                               SEQUENCE LISTING

<110> PRESIDENT AND FELLOWS OF HARVARD COLLEGE
 
<120> TARGETING LYTIC AND LATENT HERPES SIMPLEX VIRUS 1 INFECTION WITH 
      CRISPR/CAS9

<130> 002806-087551-PCT

<140>
<141>

<150> 62/365,826
<151> 2016-07-22

<160> 72    

<170> PatentIn version 3.5

<210> 1
<211> 1368
<212> PRT
<213> Streptococcus pyogenes

<400> 1
Met Asp Lys Lys Tyr Ser Ile Gly Leu Asp Ile Gly Thr Asn Ser Val 
1               5                   10                  15      


Gly Trp Ala Val Ile Thr Asp Glu Tyr Lys Val Pro Ser Lys Lys Phe 
            20                  25                  30          


Lys Val Leu Gly Asn Thr Asp Arg His Ser Ile Lys Lys Asn Leu Ile 
        35                  40                  45              


Gly Ala Leu Leu Phe Asp Ser Gly Glu Thr Ala Glu Ala Thr Arg Leu 
    50                  55                  60                  


Lys Arg Thr Ala Arg Arg Arg Tyr Thr Arg Arg Lys Asn Arg Ile Cys 
65                  70                  75                  80  


Tyr Leu Gln Glu Ile Phe Ser Asn Glu Met Ala Lys Val Asp Asp Ser 
                85                  90                  95      


Phe Phe His Arg Leu Glu Glu Ser Phe Leu Val Glu Glu Asp Lys Lys 
            100                 105                 110         


His Glu Arg His Pro Ile Phe Gly Asn Ile Val Asp Glu Val Ala Tyr 
        115                 120                 125             


His Glu Lys Tyr Pro Thr Ile Tyr His Leu Arg Lys Lys Leu Val Asp 
    130                 135                 140                 


Ser Thr Asp Lys Ala Asp Leu Arg Leu Ile Tyr Leu Ala Leu Ala His 
145                 150                 155                 160 


Met Ile Lys Phe Arg Gly His Phe Leu Ile Glu Gly Asp Leu Asn Pro 
                165                 170                 175     


Asp Asn Ser Asp Val Asp Lys Leu Phe Ile Gln Leu Val Gln Thr Tyr 
            180                 185                 190         


Asn Gln Leu Phe Glu Glu Asn Pro Ile Asn Ala Ser Gly Val Asp Ala 
        195                 200                 205             


Lys Ala Ile Leu Ser Ala Arg Leu Ser Lys Ser Arg Arg Leu Glu Asn 
    210                 215                 220                 


Leu Ile Ala Gln Leu Pro Gly Glu Lys Lys Asn Gly Leu Phe Gly Asn 
225                 230                 235                 240 


Leu Ile Ala Leu Ser Leu Gly Leu Thr Pro Asn Phe Lys Ser Asn Phe 
                245                 250                 255     


Asp Leu Ala Glu Asp Ala Lys Leu Gln Leu Ser Lys Asp Thr Tyr Asp 
            260                 265                 270         


Asp Asp Leu Asp Asn Leu Leu Ala Gln Ile Gly Asp Gln Tyr Ala Asp 
        275                 280                 285             


Leu Phe Leu Ala Ala Lys Asn Leu Ser Asp Ala Ile Leu Leu Ser Asp 
    290                 295                 300                 


Ile Leu Arg Val Asn Thr Glu Ile Thr Lys Ala Pro Leu Ser Ala Ser 
305                 310                 315                 320 


Met Ile Lys Arg Tyr Asp Glu His His Gln Asp Leu Thr Leu Leu Lys 
                325                 330                 335     


Ala Leu Val Arg Gln Gln Leu Pro Glu Lys Tyr Lys Glu Ile Phe Phe 
            340                 345                 350         


Asp Gln Ser Lys Asn Gly Tyr Ala Gly Tyr Ile Asp Gly Gly Ala Ser 
        355                 360                 365             


Gln Glu Glu Phe Tyr Lys Phe Ile Lys Pro Ile Leu Glu Lys Met Asp 
    370                 375                 380                 


Gly Thr Glu Glu Leu Leu Val Lys Leu Asn Arg Glu Asp Leu Leu Arg 
385                 390                 395                 400 


Lys Gln Arg Thr Phe Asp Asn Gly Ser Ile Pro His Gln Ile His Leu 
                405                 410                 415     


Gly Glu Leu His Ala Ile Leu Arg Arg Gln Glu Asp Phe Tyr Pro Phe 
            420                 425                 430         


Leu Lys Asp Asn Arg Glu Lys Ile Glu Lys Ile Leu Thr Phe Arg Ile 
        435                 440                 445             


Pro Tyr Tyr Val Gly Pro Leu Ala Arg Gly Asn Ser Arg Phe Ala Trp 
    450                 455                 460                 


Met Thr Arg Lys Ser Glu Glu Thr Ile Thr Pro Trp Asn Phe Glu Glu 
465                 470                 475                 480 


Val Val Asp Lys Gly Ala Ser Ala Gln Ser Phe Ile Glu Arg Met Thr 
                485                 490                 495     


Asn Phe Asp Lys Asn Leu Pro Asn Glu Lys Val Leu Pro Lys His Ser 
            500                 505                 510         


Leu Leu Tyr Glu Tyr Phe Thr Val Tyr Asn Glu Leu Thr Lys Val Lys 
        515                 520                 525             


Tyr Val Thr Glu Gly Met Arg Lys Pro Ala Phe Leu Ser Gly Glu Gln 
    530                 535                 540                 


Lys Lys Ala Ile Val Asp Leu Leu Phe Lys Thr Asn Arg Lys Val Thr 
545                 550                 555                 560 


Val Lys Gln Leu Lys Glu Asp Tyr Phe Lys Lys Ile Glu Cys Phe Asp 
                565                 570                 575     


Ser Val Glu Ile Ser Gly Val Glu Asp Arg Phe Asn Ala Ser Leu Gly 
            580                 585                 590         


Thr Tyr His Asp Leu Leu Lys Ile Ile Lys Asp Lys Asp Phe Leu Asp 
        595                 600                 605             


Asn Glu Glu Asn Glu Asp Ile Leu Glu Asp Ile Val Leu Thr Leu Thr 
    610                 615                 620                 


Leu Phe Glu Asp Arg Glu Met Ile Glu Glu Arg Leu Lys Thr Tyr Ala 
625                 630                 635                 640 


His Leu Phe Asp Asp Lys Val Met Lys Gln Leu Lys Arg Arg Arg Tyr 
                645                 650                 655     


Thr Gly Trp Gly Arg Leu Ser Arg Lys Leu Ile Asn Gly Ile Arg Asp 
            660                 665                 670         


Lys Gln Ser Gly Lys Thr Ile Leu Asp Phe Leu Lys Ser Asp Gly Phe 
        675                 680                 685             


Ala Asn Arg Asn Phe Met Gln Leu Ile His Asp Asp Ser Leu Thr Phe 
    690                 695                 700                 


Lys Glu Asp Ile Gln Lys Ala Gln Val Ser Gly Gln Gly Asp Ser Leu 
705                 710                 715                 720 


His Glu His Ile Ala Asn Leu Ala Gly Ser Pro Ala Ile Lys Lys Gly 
                725                 730                 735     


Ile Leu Gln Thr Val Lys Val Val Asp Glu Leu Val Lys Val Met Gly 
            740                 745                 750         


Arg His Lys Pro Glu Asn Ile Val Ile Glu Met Ala Arg Glu Asn Gln 
        755                 760                 765             


Thr Thr Gln Lys Gly Gln Lys Asn Ser Arg Glu Arg Met Lys Arg Ile 
    770                 775                 780                 


Glu Glu Gly Ile Lys Glu Leu Gly Ser Gln Ile Leu Lys Glu His Pro 
785                 790                 795                 800 


Val Glu Asn Thr Gln Leu Gln Asn Glu Lys Leu Tyr Leu Tyr Tyr Leu 
                805                 810                 815     


Gln Asn Gly Arg Asp Met Tyr Val Asp Gln Glu Leu Asp Ile Asn Arg 
            820                 825                 830         


Leu Ser Asp Tyr Asp Val Asp His Ile Val Pro Gln Ser Phe Leu Lys 
        835                 840                 845             


Asp Asp Ser Ile Asp Asn Lys Val Leu Thr Arg Ser Asp Lys Asn Arg 
    850                 855                 860                 


Gly Lys Ser Asp Asn Val Pro Ser Glu Glu Val Val Lys Lys Met Lys 
865                 870                 875                 880 


Asn Tyr Trp Arg Gln Leu Leu Asn Ala Lys Leu Ile Thr Gln Arg Lys 
                885                 890                 895     


Phe Asp Asn Leu Thr Lys Ala Glu Arg Gly Gly Leu Ser Glu Leu Asp 
            900                 905                 910         


Lys Ala Gly Phe Ile Lys Arg Gln Leu Val Glu Thr Arg Gln Ile Thr 
        915                 920                 925             


Lys His Val Ala Gln Ile Leu Asp Ser Arg Met Asn Thr Lys Tyr Asp 
    930                 935                 940                 


Glu Asn Asp Lys Leu Ile Arg Glu Val Lys Val Ile Thr Leu Lys Ser 
945                 950                 955                 960 


Lys Leu Val Ser Asp Phe Arg Lys Asp Phe Gln Phe Tyr Lys Val Arg 
                965                 970                 975     


Glu Ile Asn Asn Tyr His His Ala His Asp Ala Tyr Leu Asn Ala Val 
            980                 985                 990         


Val Gly Thr Ala Leu Ile Lys Lys  Tyr Pro Lys Leu Glu  Ser Glu Phe 
        995                 1000                 1005             


Val Tyr  Gly Asp Tyr Lys Val  Tyr Asp Val Arg Lys  Met Ile Ala 
    1010                 1015                 1020             


Lys Ser  Glu Gln Glu Ile Gly  Lys Ala Thr Ala Lys  Tyr Phe Phe 
    1025                 1030                 1035             


Tyr Ser  Asn Ile Met Asn Phe  Phe Lys Thr Glu Ile  Thr Leu Ala 
    1040                 1045                 1050             


Asn Gly  Glu Ile Arg Lys Arg  Pro Leu Ile Glu Thr  Asn Gly Glu 
    1055                 1060                 1065             


Thr Gly  Glu Ile Val Trp Asp  Lys Gly Arg Asp Phe  Ala Thr Val 
    1070                 1075                 1080             


Arg Lys  Val Leu Ser Met Pro  Gln Val Asn Ile Val  Lys Lys Thr 
    1085                 1090                 1095             


Glu Val  Gln Thr Gly Gly Phe  Ser Lys Glu Ser Ile  Leu Pro Lys 
    1100                 1105                 1110             


Arg Asn  Ser Asp Lys Leu Ile  Ala Arg Lys Lys Asp  Trp Asp Pro 
    1115                 1120                 1125             


Lys Lys  Tyr Gly Gly Phe Asp  Ser Pro Thr Val Ala  Tyr Ser Val 
    1130                 1135                 1140             


Leu Val  Val Ala Lys Val Glu  Lys Gly Lys Ser Lys  Lys Leu Lys 
    1145                 1150                 1155             


Ser Val  Lys Glu Leu Leu Gly  Ile Thr Ile Met Glu  Arg Ser Ser 
    1160                 1165                 1170             


Phe Glu  Lys Asn Pro Ile Asp  Phe Leu Glu Ala Lys  Gly Tyr Lys 
    1175                 1180                 1185             


Glu Val  Lys Lys Asp Leu Ile  Ile Lys Leu Pro Lys  Tyr Ser Leu 
    1190                 1195                 1200             


Phe Glu  Leu Glu Asn Gly Arg  Lys Arg Met Leu Ala  Ser Ala Gly 
    1205                 1210                 1215             


Glu Leu  Gln Lys Gly Asn Glu  Leu Ala Leu Pro Ser  Lys Tyr Val 
    1220                 1225                 1230             


Asn Phe  Leu Tyr Leu Ala Ser  His Tyr Glu Lys Leu  Lys Gly Ser 
    1235                 1240                 1245             


Pro Glu  Asp Asn Glu Gln Lys  Gln Leu Phe Val Glu  Gln His Lys 
    1250                 1255                 1260             


His Tyr  Leu Asp Glu Ile Ile  Glu Gln Ile Ser Glu  Phe Ser Lys 
    1265                 1270                 1275             


Arg Val  Ile Leu Ala Asp Ala  Asn Leu Asp Lys Val  Leu Ser Ala 
    1280                 1285                 1290             


Tyr Asn  Lys His Arg Asp Lys  Pro Ile Arg Glu Gln  Ala Glu Asn 
    1295                 1300                 1305             


Ile Ile  His Leu Phe Thr Leu  Thr Asn Leu Gly Ala  Pro Ala Ala 
    1310                 1315                 1320             


Phe Lys  Tyr Phe Asp Thr Thr  Ile Asp Arg Lys Arg  Tyr Thr Ser 
    1325                 1330                 1335             


Thr Lys  Glu Val Leu Asp Ala  Thr Leu Ile His Gln  Ser Ile Thr 
    1340                 1345                 1350             


Gly Leu  Tyr Glu Thr Arg Ile  Asp Leu Ser Gln Leu  Gly Gly Asp 
    1355                 1360                 1365             


<210> 2
<211> 1053
<212> PRT
<213> Staphylococcus aureus

<400> 2
Met Lys Arg Asn Tyr Ile Leu Gly Leu Asp Ile Gly Ile Thr Ser Val 
1               5                   10                  15      


Gly Tyr Gly Ile Ile Asp Tyr Glu Thr Arg Asp Val Ile Asp Ala Gly 
            20                  25                  30          


Val Arg Leu Phe Lys Glu Ala Asn Val Glu Asn Asn Glu Gly Arg Arg 
        35                  40                  45              


Ser Lys Arg Gly Ala Arg Arg Leu Lys Arg Arg Arg Arg His Arg Ile 
    50                  55                  60                  


Gln Arg Val Lys Lys Leu Leu Phe Asp Tyr Asn Leu Leu Thr Asp His 
65                  70                  75                  80  


Ser Glu Leu Ser Gly Ile Asn Pro Tyr Glu Ala Arg Val Lys Gly Leu 
                85                  90                  95      


Ser Gln Lys Leu Ser Glu Glu Glu Phe Ser Ala Ala Leu Leu His Leu 
            100                 105                 110         


Ala Lys Arg Arg Gly Val His Asn Val Asn Glu Val Glu Glu Asp Thr 
        115                 120                 125             


Gly Asn Glu Leu Ser Thr Lys Glu Gln Ile Ser Arg Asn Ser Lys Ala 
    130                 135                 140                 


Leu Glu Glu Lys Tyr Val Ala Glu Leu Gln Leu Glu Arg Leu Lys Lys 
145                 150                 155                 160 


Asp Gly Glu Val Arg Gly Ser Ile Asn Arg Phe Lys Thr Ser Asp Tyr 
                165                 170                 175     


Val Lys Glu Ala Lys Gln Leu Leu Lys Val Gln Lys Ala Tyr His Gln 
            180                 185                 190         


Leu Asp Gln Ser Phe Ile Asp Thr Tyr Ile Asp Leu Leu Glu Thr Arg 
        195                 200                 205             


Arg Thr Tyr Tyr Glu Gly Pro Gly Glu Gly Ser Pro Phe Gly Trp Lys 
    210                 215                 220                 


Asp Ile Lys Glu Trp Tyr Glu Met Leu Met Gly His Cys Thr Tyr Phe 
225                 230                 235                 240 


Pro Glu Glu Leu Arg Ser Val Lys Tyr Ala Tyr Asn Ala Asp Leu Tyr 
                245                 250                 255     


Asn Ala Leu Asn Asp Leu Asn Asn Leu Val Ile Thr Arg Asp Glu Asn 
            260                 265                 270         


Glu Lys Leu Glu Tyr Tyr Glu Lys Phe Gln Ile Ile Glu Asn Val Phe 
        275                 280                 285             


Lys Gln Lys Lys Lys Pro Thr Leu Lys Gln Ile Ala Lys Glu Ile Leu 
    290                 295                 300                 


Val Asn Glu Glu Asp Ile Lys Gly Tyr Arg Val Thr Ser Thr Gly Lys 
305                 310                 315                 320 


Pro Glu Phe Thr Asn Leu Lys Val Tyr His Asp Ile Lys Asp Ile Thr 
                325                 330                 335     


Ala Arg Lys Glu Ile Ile Glu Asn Ala Glu Leu Leu Asp Gln Ile Ala 
            340                 345                 350         


Lys Ile Leu Thr Ile Tyr Gln Ser Ser Glu Asp Ile Gln Glu Glu Leu 
        355                 360                 365             


Thr Asn Leu Asn Ser Glu Leu Thr Gln Glu Glu Ile Glu Gln Ile Ser 
    370                 375                 380                 


Asn Leu Lys Gly Tyr Thr Gly Thr His Asn Leu Ser Leu Lys Ala Ile 
385                 390                 395                 400 


Asn Leu Ile Leu Asp Glu Leu Trp His Thr Asn Asp Asn Gln Ile Ala 
                405                 410                 415     


Ile Phe Asn Arg Leu Lys Leu Val Pro Lys Lys Val Asp Leu Ser Gln 
            420                 425                 430         


Gln Lys Glu Ile Pro Thr Thr Leu Val Asp Asp Phe Ile Leu Ser Pro 
        435                 440                 445             


Val Val Lys Arg Ser Phe Ile Gln Ser Ile Lys Val Ile Asn Ala Ile 
    450                 455                 460                 


Ile Lys Lys Tyr Gly Leu Pro Asn Asp Ile Ile Ile Glu Leu Ala Arg 
465                 470                 475                 480 


Glu Lys Asn Ser Lys Asp Ala Gln Lys Met Ile Asn Glu Met Gln Lys 
                485                 490                 495     


Arg Asn Arg Gln Thr Asn Glu Arg Ile Glu Glu Ile Ile Arg Thr Thr 
            500                 505                 510         


Gly Lys Glu Asn Ala Lys Tyr Leu Ile Glu Lys Ile Lys Leu His Asp 
        515                 520                 525             


Met Gln Glu Gly Lys Cys Leu Tyr Ser Leu Glu Ala Ile Pro Leu Glu 
    530                 535                 540                 


Asp Leu Leu Asn Asn Pro Phe Asn Tyr Glu Val Asp His Ile Ile Pro 
545                 550                 555                 560 


Arg Ser Val Ser Phe Asp Asn Ser Phe Asn Asn Lys Val Leu Val Lys 
                565                 570                 575     


Gln Glu Glu Asn Ser Lys Lys Gly Asn Arg Thr Pro Phe Gln Tyr Leu 
            580                 585                 590         


Ser Ser Ser Asp Ser Lys Ile Ser Tyr Glu Thr Phe Lys Lys His Ile 
        595                 600                 605             


Leu Asn Leu Ala Lys Gly Lys Gly Arg Ile Ser Lys Thr Lys Lys Glu 
    610                 615                 620                 


Tyr Leu Leu Glu Glu Arg Asp Ile Asn Arg Phe Ser Val Gln Lys Asp 
625                 630                 635                 640 


Phe Ile Asn Arg Asn Leu Val Asp Thr Arg Tyr Ala Thr Arg Gly Leu 
                645                 650                 655     


Met Asn Leu Leu Arg Ser Tyr Phe Arg Val Asn Asn Leu Asp Val Lys 
            660                 665                 670         


Val Lys Ser Ile Asn Gly Gly Phe Thr Ser Phe Leu Arg Arg Lys Trp 
        675                 680                 685             


Lys Phe Lys Lys Glu Arg Asn Lys Gly Tyr Lys His His Ala Glu Asp 
    690                 695                 700                 


Ala Leu Ile Ile Ala Asn Ala Asp Phe Ile Phe Lys Glu Trp Lys Lys 
705                 710                 715                 720 


Leu Asp Lys Ala Lys Lys Val Met Glu Asn Gln Met Phe Glu Glu Lys 
                725                 730                 735     


Gln Ala Glu Ser Met Pro Glu Ile Glu Thr Glu Gln Glu Tyr Lys Glu 
            740                 745                 750         


Ile Phe Ile Thr Pro His Gln Ile Lys His Ile Lys Asp Phe Lys Asp 
        755                 760                 765             


Tyr Lys Tyr Ser His Arg Val Asp Lys Lys Pro Asn Arg Glu Leu Ile 
    770                 775                 780                 


Asn Asp Thr Leu Tyr Ser Thr Arg Lys Asp Asp Lys Gly Asn Thr Leu 
785                 790                 795                 800 


Ile Val Asn Asn Leu Asn Gly Leu Tyr Asp Lys Asp Asn Asp Lys Leu 
                805                 810                 815     


Lys Lys Leu Ile Asn Lys Ser Pro Glu Lys Leu Leu Met Tyr His His 
            820                 825                 830         


Asp Pro Gln Thr Tyr Gln Lys Leu Lys Leu Ile Met Glu Gln Tyr Gly 
        835                 840                 845             


Asp Glu Lys Asn Pro Leu Tyr Lys Tyr Tyr Glu Glu Thr Gly Asn Tyr 
    850                 855                 860                 


Leu Thr Lys Tyr Ser Lys Lys Asp Asn Gly Pro Val Ile Lys Lys Ile 
865                 870                 875                 880 


Lys Tyr Tyr Gly Asn Lys Leu Asn Ala His Leu Asp Ile Thr Asp Asp 
                885                 890                 895     


Tyr Pro Asn Ser Arg Asn Lys Val Val Lys Leu Ser Leu Lys Pro Tyr 
            900                 905                 910         


Arg Phe Asp Val Tyr Leu Asp Asn Gly Val Tyr Lys Phe Val Thr Val 
        915                 920                 925             


Lys Asn Leu Asp Val Ile Lys Lys Glu Asn Tyr Tyr Glu Val Asn Ser 
    930                 935                 940                 


Lys Cys Tyr Glu Glu Ala Lys Lys Leu Lys Lys Ile Ser Asn Gln Ala 
945                 950                 955                 960 


Glu Phe Ile Ala Ser Phe Tyr Asn Asn Asp Leu Ile Lys Ile Asn Gly 
                965                 970                 975     


Glu Leu Tyr Arg Val Ile Gly Val Asn Asn Asp Leu Leu Asn Arg Ile 
            980                 985                 990         


Glu Val Asn Met Ile Asp Ile Thr  Tyr Arg Glu Tyr Leu  Glu Asn Met 
        995                 1000                 1005             


Asn Asp  Lys Arg Pro Pro Arg  Ile Ile Lys Thr Ile  Ala Ser Lys 
    1010                 1015                 1020             


Thr Gln  Ser Ile Lys Lys Tyr  Ser Thr Asp Ile Leu  Gly Asn Leu 
    1025                 1030                 1035             


Tyr Glu  Val Lys Ser Lys Lys  His Pro Gln Ile Ile  Lys Lys Gly 
    1040                 1045                 1050             


<210> 3
<211> 4288
<212> DNA
<213> Herpes simplex virus 1 

<400> 3
tatatgagcc cgaggacgcc ccgatcgtcc acacggagcg cggctgccga cacggatcca       60

cgacccgacg cgggaccgcc agagacagac cgtcagacgc tcgccgcgcc gggacgccga      120

tacgcggacg aagcgcggga gggggatcgg ccgtccctgt cctttttccc acccaagcat      180

cgaccggtcc gcgctagttc cgcgtcgacg gcgggggtcg tcggggtccg tgggtctcgc      240

cccctccccc catcgagagt ccgtaggtga cctaccgtgc tacgtccgcc gtcgcagccg      300

tatccccgga ggatcgcccc gcatcggcga tggcgtcgga gaacaagcag cgccccggct      360

ccccgggccc caccgacggg ccgccgccca ccccgagccc agaccgcgac gagcgggggg      420

ccctcgggtg gggcgcggag acggaggagg gcggggacga ccccgaccac gaccccgacc      480

acccccacga cctcgacgac gcccggcggg acgggagggc ccccgcggcg ggcaccgacg      540

ccggcgagga cgccggggac gccgtctcgc cgcgacagct ggctctgctg gcctccatgg      600

tagaggaggc cgtccggacg atcccgacgc ccgaccccgc ggcctcgccg ccccggaccc      660

ccgcctttcg agccgacgac gatgacgggg acgagtacga cgacgcagcc gacgccgccg      720

gcgaccgggc cccggcccgg ggccgcgaac gggaggcccc gctacgcggc gcgtatccgg      780

accccacgga ccgcctgtcg ccgcgcccgc cggcccagcc gccgcggaga cgtcgtcacg      840

gccggtggcg gccatcggcg tcatcgacct cgtcggactc cgggtcctcg tcctcgtcgt      900

ccgcatcctc ttcgtcctcg tcgtccgacg aggacgagga cgacgacggc aacgacgcgg      960

ccgaccacgc acgcgaggcg cgggccgtcg ggcggggtcc gtcgagcgcg gcgccggcag     1020

cccccgggcg gacgccgccc ccgcccgggc caccccccct ctccgaggcc gcgcccaagc     1080

cccgggcggc ggcgaggacc cccgcggcct ccgcgggccg catcgagcgc cgccgggccc     1140

gcgcggcggt ggccggccgc gacgccacgg gccgcttcac ggccgggcag ccccggcggg     1200

tcgagctgga cgccgacgcg gcctccggcg ccttctacgc gcgctatcgc gacgggtacg     1260

tcagcgggga gccgtggccc ggcgccgggc ccccgccccc ggggcgggtg ctgtacggcg     1320

gcctgggcga cagccgcccg ggcctctggg gggcgcccga ggcggaggag gcgcgacgcc     1380

ggttcgaggc ctcgggcgcc ccggcggccg tgtgggcgcc cgagctgggc gacgccgcgc     1440

agcagtacgc cctgatcacg cggctgctgt acaccccgga cgcggaggcc atggggtggc     1500

tccagaaccc gcgcgtggtc cccggggacg tggcgctgga ccaggcctgc ttccggatct     1560

cgggcgccgc gcgcaacagc agctccttca tcaccggcag cgtggcgcgg gccgtgcccc     1620

acctgggcta cgccatggcg gccggccgct tcggctgggg cctggcgcac gcggcggccg     1680

ccgtggccat gagccgccga tacgaccgcg cgcagaaggg cttcctgctg accagcctgc     1740

gccgcgccta cgcgcccctg ttggcgcgcg agaacgcggc gctgacgggg gccgcgggga     1800

gccccggcgc cggcgcagat gacgaggggg tcgccgccgt cgccgccgcc gcaccgggcg     1860

agcgcgcggt gcccgccggg tacggcgccg cggggatcct cgccgccctg gggcggctgt     1920

ccgccgcgcc cgcctccccc gcggggggcg acgaccccga cgccgcccgc cacgccgacg     1980

ccgacgacga cgccgggcgc cgcgcccagg ccggccgcgt ggccgtcgag tgcctggccg     2040

cctgccgcgg gatcctggag gcgctggccg agggcttcga cggcgacctg gcggccgtcc     2100

cggggctggc cggggcccgg cccgccagcc ccccgcggcc ggagggaccc gcgggccccg     2160

cttccccgcc gccgccgcac gccgacgcgc cccgcctgcg cgcgtggctg cgcgagctgc     2220

ggttcgtgcg cgacgcgctg gtgctcatgc gcctgcgcgg ggacctgcgc gtggccggcg     2280

gcagcgaggc cgccgtggcc gccgtgcgcg ccgtgagcct ggtcgccggg gccctgggcc     2340

ccgcgctgcc gcgggacccg cgcctgccga gctccgcggc cgccgccgcc gcggacctgc     2400

tgtttgacaa ccagagcctg cgccccctgc tggcggcggc ggccagcgca ccggacgccg     2460

ccgacgcgct ggcggccgcc gccgcctccg ccgcgccgcg ggaggggcgc aagcgcaaga     2520

gtcccggccc ggcccggccg cccggaggcg gcggcccgcg acccccgaag acgaagaaga     2580

gcggcgcgga cgcccccggc tcggacgccc gcgcccccct ccccgcgccc gcgcccccct     2640

ccacgccccc ggggcccgag cccgcccccg cccagcccgc ggcgccccgg gccgccgcgg     2700

cgcaggcccg cccgcgcccc gtggcgctgt cgcgccggcc cgccgagggc cccgaccccc     2760

tgggcggctg gcggcggcag cccccggggc ccagccacac ggcggcgccc gcggccgccg     2820

ccctggaggc ctactgctcc ccgcgcgccg tggccgagct cacggaccac ccgctgttcc     2880

ccgtcccctg gcgaccggcc ctcatgtttg acccgcgggc cctggcctcg atcgccgcgc     2940

ggtgcgccgg gcccgccccc gccgcccagg ccgcgtgcgg cggcggcgac gacgacgata     3000

acccccaccc ccacggggcc gccgggggcc gcctctttgg ccccctgcgc gcctcgggcc     3060

cgctgcgccg catggcggcc tggatgcgcc agatccccga ccccgaggac gtgcgcgtgg     3120

tggtgctgta ctcgccgctg ccgggcgagg acctggccgg cggcggggcc tcgggggggc     3180

cgccggagtg gtccgccgag cgcggcgggc tgtcctgcct gctggcggcc ctggccaacc     3240

ggctgtgcgg gccggacacg gccgcctggg cgggcaactg gaccggcgcc cccgacgtgt     3300

cggcgctggg cgcacagggc gtgctgctgc tgtccacgcg ggacctggcc ttcgccgggg     3360

ccgtggagtt tctggggctg ctcgccagcg ccggcgaccg gcggctcatc gtggtcaaca     3420

ccgtgcgcgc ctgcgactgg cccgccgacg ggcccgcggt gtcgcggcag cacgcctacc     3480

tggcgtgcga gctgctgccc gccgtgcagt gcgccgtgcg ctggccggcg gcgcgggacc     3540

tgcgccgcac ggtgctggcc tcgggccgcg tgttcggccc gggggtcttc gcgcgcgtgg     3600

aggccgcgca cgcgcgcctg taccccgacg cgccgccgct gcgcctgtgc cgcggcggca     3660

acgtgcgcta ccgcgtgcgc acgcgcttcg gcccggacac gccggtgccc atgtccccgc     3720

gcgagtaccg ccgggccgtg ctgccggcgc tggacggccg ggcggcggcc tcggggacca     3780

ccgacgccat ggcgcccggc gcgccggact tctgcgagga ggaggcccac tcgcaccgcg     3840

cctgcgcgcg ctggggcctg ggcgcgccgc tgcggcccgt gtacgtggcg ctggggcgcg     3900

aggcggtgcg cgccggcccg gcccggtggc gcgggccgcg gagggacttt tgcgcccgcg     3960

ccctgctgga gcccgacgac gacgcccccc cgctggtgct gcgcggcgac gacgacggcc     4020

cgggggccct gccgccggcg ccgcccggga ttcgctgggc ctcggccacg ggccgcagcg     4080

gcaccgtgct ggcggcggcg ggggccgtgg aggtgctggg ggcggaggcg ggcttggcca     4140

cgcccccgcg gcgggaagtt gtggactggg aaggcgcctg ggacgaagac gacggcggcg     4200

cgttcgaggg ggacggggtg ctgtaacggg ccgggacggg gcggggcgct tgtgagaccc     4260

gaagacgcaa taaacggcaa caacctga                                        4288


<210> 4
<211> 1549
<212> DNA
<213> Herpes simplex virus 1 

<400> 4
atggcgactg acattgatat gctaattgac ctcggcctgg acctctccga cagcgatctg       60

gacgaggacc cccccgagcc ggcggagagc cgccgcgacg acctggaatc ggacagcagc      120

ggggagtgtt cctcgtcgga cgaggacatg gaagaccccc acggagagga cggaccggag      180

ccgatactcg acgccgctcg cccggcggtc cgcccgtctc gtccagaaga ccccggcgta      240

cccagcaccc agacgcctcg tccgacggag cggcagggcc ccaacgatcc tcaaccagcg      300

ccccacagtg tgtggtcgcg cctcggggcc cggcgaccgt cttgctcccc cgagcagcac      360

gggggcaagg tggcccgcct ccaaccccca ccgaccaaag cccagcctgc ccgcggcgga      420

cgccgtgggc gtcgcagggg tcggggtcgc ggtggtcccg gggctgccga tggtttgtcg      480

gacccccgcc ggcgtgcccc cagaaccaat cgcaaccctg ggggaccccg ccccggggcg      540

gggtggacgg acggccccgg cgccccccat ggcgaggcgt ggcgcggcag tgagcagccc      600

gacccacccg gaggccagcg gacacggggc gtgcgccaag cacccccccc gctaatgacg      660

ctggcgattg cccccccgcc cgcggacccc cgcgccccgg ccccggagcg aaaggcgccc      720

gccgccgaca ccatcgacgc caccacgcgg ttggtcctgc gctccatctc cgagcgcgcg      780

gcggtcgacc gcatcagcga gagctttggc cgcagcgcac aggtcatgca cgaccccttt      840

ggggggcagc cgtttcccgc cgcgaatagc ccctgggccc cggtgctggc gggccaagga      900

gggccctttg acgccgagac cagacgggtc tcctgggaaa ccttggtcgc ccacggcccg      960

agcctctatc gcacttttgc cggcaatcct cgggccgcat cgaccgccaa ggccatgcgc     1020

gactgcgtgc tgcgccaaga aaatttcatc gaggcgctgg cctccgccga cgagacgctg     1080

gcgtggtgca agatgtgcat ccaccacaac ctgccgctgc gcccccagga ccccattatc     1140

gggacggccg cggctgtgct ggataacctc gccacgcgcc tgcggccctt tctccagtgc     1200

tacctgaagg cgcgaggcct gtgcggcctg gacgaactgt gttcgcggcg gcgtctggcg     1260

gacattaagg acattgcatc cttcgtgttt gtcattctgg ccaggctcgc caaccgcgtc     1320

gagcgtggcg tcgcggagat cgactacgcg acccttggtg tcggggtcgg agagaagatg     1380

catttctacc tccccggggc ctgcatggcg ggcctgatcg aaatcctaga cacgcaccgc     1440

caggagtgtt cgagtcgtgt ctgcgagttg acggccagtc acatcgtcgc ccccccgtac     1500

gtgcacggca aatattttta ttgcaactcc ctgttttagg tacaataaa                 1549


<210> 5
<211> 3645
<212> DNA
<213> Herpes simplex virus 1 

<400> 5
atggagacaa agcccaagac ggcaaccacc atcaaggtcc cccccgggcc cctgggatac       60

gtgtacgctc gcgcgtgtcc gtccgaaggc atcgagcttc tggcgttact gtcggcacgc      120

agcggcgatt ccgacgtcgc cgtggcgccc ctggtcgtgg gcctgaccgt ggagagcggc      180

tttgaggcca acgtggccgt ggtcgtgggt tctcgcacga cggggctcgg gggtaccgcg      240

gtgtccctga aactgacgcc ctcgcactac agctcgtccg tgtacgtctt tcacggcggc      300

cggcacctgg accccagcac ccaggccccg aacctgacgc gactttgcga gcgggcacgc      360

cgccattttg gcttttcgga ctacaccccc cggcccggcg acctcaaaca cgagacgacg      420

ggggaggcgc tgtgtgagcg cctcggcctg gacccggacc gcgccctcct gtatctggtc      480

gttaccgagg gcttcaagga ggccgtgtgc atcaacaaca cctttctgca cctgggaggc      540

tcggacaagg taaccatagg cggggcggag gtgcaccgca tacccgtgta cccgttgcag      600

ctgttcatgc cggattttag ccgtgtcatc gcagagccgt tcaacgccaa ccaccgatcg      660

atcggggaga attttaccta cccgcttccg ttttttaacc gccccctcaa ccgcctcctg      720

ttcgaggcgg tcgtgggacc cgccgccgtg gcactgcgat gccgaaacgt ggacgccgtg      780

gcccgcgcgg ccgcccacct ggcgtttgac gaaaaccacg agggcgccgc cctccccgcc      840

gacattacgt tcacggcctt cgaagccagc cagggtaaga ccccgcgggg cgggcgcgac      900

ggcggcggca agggcccggc gggcgggttc gaacagcgcc tggcctccgt catggccgga      960

gacgccgccc tggccctcga gtctatcgtg tcgatggccg tctttgacga gccgcccacc     1020

gacatctccg cgtggccgct gttcgagggc caggacacgg ccgcggcccg cgccaacgcc     1080

gtcggggcgt acctggcgcg cgccgcggga ctcgtggggg ccatggtatt tagcaccaac     1140

tcggccctcc atctcaccga ggtggacgac gccggcccgg cggacccaaa ggaccacagc     1200

aaaccctcct tttaccgctt cttcctcgtg cccgggaccc acgtggcggc caacccacag     1260

gtggaccgcg agggacacgt ggtgcccggg ttcgagggtc ggcccaccgc gcccctcgtc     1320

ggcggaaccc aggaatttgc cggcgagcac ctggccatgc tgtgtgggtt ttccccggcg     1380

ctgctggcca agatgctgtt ttacctggag cgctgcgacg gcggcgtgat cgtcgggcgc     1440

caggagatgg acgtgtttcg atacgtcgcg gactccaacc agaccgacgt gccctgtaac     1500

ctatgcacct tcgacacgcg ccacgcctgc gtacacacga cgctcatgcg cctccgggcg     1560

cgccatccaa agttcgccag cgccgcccgc ggagccatcg gcgtcttcgg gaccatgaac     1620

agcatgtaca gcgactgcga cgtgctggga aactacgccg ccttctcggc cctgaagcgc     1680

gcggacggat ccgagaccgc ccggaccatc atgcaggaga cgtaccgcgc ggcgaccgag     1740

cgcgtcatgg ccgaactcga gaccctgcag tacgtggacc aggcggtccc cacggccatg     1800

gggcggctgg agaccatcat caccaaccgc gaggccctgc atacggtggt gaacaacgtc     1860

aggcaggtcg tggaccgcga ggtggagcag ctgatgcgca acctggtgga ggggaggaac     1920

ttcaagtttc gcgacggtct gggcgaggcc aaccacgcca tgtccctgac gctggacccg     1980

tacgcgtgcg ggccgtgccc cctgcttcag cttctcgggc ggcgatccaa cctcgccgtg     2040

taccaggacc tggccctgag tcagtgccac ggggtgttcg ccgggcagtc ggtcgagggg     2100

cgcaactttc gcaatcaatt ccaaccggtg ctgcggcggc gcgtgatgga catgtttaac     2160

aacgggtttc tgtcggccaa aacgctgacg gtcgcgctct cggagggggc ggctatctgc     2220

gcccccagcc taacggccgg ccagacggcc cccgccgaga gcagcttcga gggcgacgtt     2280

gcccgcgtga ccctggggtt tcccaaggag ctgcgcgtca agagccgcgt gttgttcgcg     2340

ggcgcgagcg ccaacgcgtc cgaggccgcc aaggcgcggg tcgccagcct ccagagcgcc     2400

taccagaagc ccgacaagcg cgtggacatc ctcctcggac cgctgggctt tctgctgaag     2460

cagttccacg cggccatctt ccccaacggc aagcccccgg ggtccaacca gccgaacccg     2520

cagtggttct ggacggccct ccaacgcaac cagcttcccg cccggctcct gtcgcgcgag     2580

gacatcgaga ccatcgcgtt cattaaaaag ttttccctgg actacggcgc gataaacttt     2640

attaacctgg cccccaacaa cgtgagcgag ctggcgatgt actacatggc aaaccagatt     2700

ctgcggtact gcgatcactc gacatacttc atcaacaccc ttacggccat catcgcgggg     2760

tcccgccgtc cccccagcgt gcaggctgcg gccgcgtggt ccgcgcaggg cggggcgggc     2820

ctggaggccg gggcccgcgc gctgatggac gccgtggacg cgcatccggg cgcgtggacg     2880

tccatgttcg ccagctgcaa cctgctgcgg cccgtcatgg cggcgcgccc catggtcgtg     2940

ttggggttga gcatcagcaa gtactacggc atggccggca acgaccgtgt gtttcaggcc     3000

gggaactggg ccagcctgat gggcggcaaa aacgcgtgcc cgctccttat ttttgaccgc     3060

acccgcaagt tcgtcctggc ctgtccccgg gccgggtttg tgtgcgcggc ctcaagcctc     3120

ggcggcggag cgcacgaaag ctcgctgtgc gagcagctcc ggggcattat ctccgagggc     3180

ggggcggccg tcgccagtag cgtgttcgtg gcgaccgtga aaagcctggg gccccgcacc     3240

cagcagctgc agatcgagga ctggctggcg ctcctggagg acgagtacct aagcgaggag     3300

atgatggagc tgaccgcgcg tgccctggag cgcggcaacg gcgagtggtc gacggacgcg     3360

gccctggagg tggcgcacga ggccgaggcc ctagtcagcc aactcggcaa cgccggggag     3420

gtgtttaact ttggggattt tggctgcgag gacgacaacg cgacgccgtt cggcggcccg     3480

ggggccccgg gaccggcatt tgccggccgc aaacgggcgt tccacgggga tgacccgttt     3540

ggggaggggc cccccgacaa aaagggagac ctgacgttgg atatgctgtg aggggttggg     3600

gggtggggga acctagggcg gggcggggaa tgtgtgtaaa ataaa                     3645


<210> 6
<211> 3747
<212> DNA
<213> Herpes simplex virus 1 

<400> 6
atgttttccg gtggcggcgg cccgctgtcc cccggaggaa agtcggcggc cagggcggcg       60

tccgggtttt ttgcgcccgc cggccctcgc ggagccagcc ggggaccccc gccttgtttg      120

aggcaaaact tttacaaccc ctacctcgcc ccagtcggga cgcaacagaa gccgaccggg      180

ccaacccagc gccatacgta ctatagcgaa tgcgatgaat ttcgattcat cgccccgcgg      240

gtgctggacg aggatgcccc cccggagaag cgcgccgggg tgcacgacgg tcacctcaag      300

cgcgccccca aggtgtactg cgggggggac gagcgcgacg tcctccgcgt cgggtcgggc      360

ggcttctggc cgcggcgctc gcgcctgtgg ggcggcgtgg accacgcccc ggcggggttc      420

aaccccaccg tcaccgtctt tcacgtgtac gacatcctgg agaacgtgga gcacgcgtac      480

ggcatgcgcg cggcccagtt ccacgcgcgg tttatggacg ccatcacacc gacggggacc      540

gtcatcacgc tcctgggcct gactccggaa ggccaccggg tggccgttca cgtttacggc      600

acgcggcagt acttttacat gaacaaggag gaggtcgaca ggcacctaca atgccgcgcc      660

ccacgagatc tctgcgagcg catggccgcg gccctgcgcg agtccccggg cgcgtcgttc      720

cgcggcatct ccgcggacca cttcgaggcg gaggtggtgg agcgcaccga cgtgtactac      780

tacgagacgc gccccgctct gttttaccgc gtctacgtcc gaagcgggcg cgtgctgtcg      840

tacctgtgcg acaacttctg cccggccatc aagaagtacg agggtggggt cgacgccacc      900

acccggttca tcctggacaa ccccgggttc gtcaccttcg gctggtaccg tctcaaaccg      960

ggccggaaca acacgctagc ccagccgcgg gccccgatgg ccttcgggac atccagcgac     1020

gtcgagttta actgtacggc ggacaacctg gccatcgagg ggggcatgag cgacctaccg     1080

gcatacaagc tcatgtgctt cgatatcgaa tgcaaggcgg ggggggagga cgagctggcc     1140

tttccggtgg ccgggcaccc ggaggacctg gtcatccaga tatcctgtct gctctacgac     1200

ctgtccacca ccgccctgga gcacgtcctc ctgttttcgc tcggttcctg cgacctcccc     1260

gaatcccacc tgaacgagct ggcggccagg ggcctgccca cgcccgtggt tctggaattc     1320

gacagcgaat tcgagatgct gttggccttc atgacccttg tgaaacagta cggccccgag     1380

ttcgtgaccg ggtacaacat catcaacttc gactggccct tcttgctggc caagctgacg     1440

gacatttaca aggtccccct ggacgggtac ggccgcatga acggccgggg cgtgtttcgc     1500

gtgtgggaca taggccagag ccacttccag aagcgcagca agataaaggt gaacggcatg     1560

gtgaacatcg acatgtacgg gattataacc gacaagatca agctctcgag ctacaagctc     1620

aacgccgtgg ccgaagccgt cctgaaggac aagaagaagg acctgagcta tcgcgacatc     1680

cccgcctact acgccgccgg gcccgcgcaa cgcggggtga tcggcgagta ctgcatacag     1740

gattccctgc tggtgggcca gctgtttttt aagtttttgc cccatctgga gctctcggcc     1800

gtcgcgcgct tggcgggtat taacatcacc cgcaccatct acgacggcca gcagatccgc     1860

gtctttacgt gcctgctgcg cctggccgac cagaagggct ttattctgcc ggacacccag     1920

gggcgattta ggggcgccgg gggggaggcg cccaagcgtc cggccgcagc ccgggaggac     1980

gaggagcggc cagaggagga gggggaggac gaggacgaac gcgaggaggg cgggggcgag     2040

cgggagccgg agggcgcgcg ggagaccgcc ggcaggcacg tggggtacca gggggccagg     2100

gtccttgacc ccacttccgg gtttcacgtg aaccccgtgg tggtgttcga ctttgccagc     2160

ctgtacccca gcatcatcca ggcccacaac ctgtgcttca gcacgctctc cctgagggcc     2220

gacgcagtgg cgcacctgga ggcgggcaag gactacctgg agatcgaggt gggggggcga     2280

cggctgttct tcgtcaaggc tcacgtgcga gagagcctcc tcagcatcct cctgcgggac     2340

tggctcgcca tgcgaaagca gatccgctcg cggattcccc agagcagccc cgaggaggcc     2400

gtgctcctgg acaagcagca ggccgccatc aaggtcgtgt gtaactcggt gtacgggttc     2460

acgggagtgc agcacggact cctgccgtgc ctgcacgttg ccgcgacggt gacgaccatc     2520

ggccgcgaga tgctgctcgc gacccgcgag tacgtccacg cgcgctgggc ggccttcgaa     2580

cagctcctgg ccgatttccc ggaggcggcc gacatgcgcg cccccgggcc ctattccatg     2640

cgcatcatct acggggacac ggactccatc tttgtgctgt gccgcggcct cacggccgcc     2700

gggctgacgg ccgtgggcga caagatggcg agccacatct cgcgcgcgct gtttctgccc     2760

cccatcaaac tcgagtgcga aaagacgttc accaagctgc tgctgatcgc caagaaaaag     2820

tacatcggcg tcatctacgg gggtaagatg ctcatcaagg gcgtggatct ggtgcgcaaa     2880

aacaactgcg cgtttatcaa ccgcacctcc agggccctgg tcgacctgct gttttacgac     2940

gataccgtct ccggagcggc cgccgcgtta gccgagcgcc ccgcggagga gtggctggcg     3000

cgacccctgc ccgagggact gcaggcgttc ggggccgtcc tcgtagacgc ccatcggcgc     3060

atcaccgacc cggagaggga catccaggac tttgtcctca ccgccgaact gagcagacac     3120

ccgcgcgcgt acaccaacaa gcgcctggcc cacctgacgg tgtattacaa gctcatggcc     3180

cgccgcgcgc aggtcccgtc catcaaggac cggatcccgt acgtgatcgt ggcccagacc     3240

cgcgaggtag aggagacggt cgcgcggctg gccgccctcc gcgagctaga cgccgccgcc     3300

ccaggggacg agcccgcccc ccccgcggcc ctgccctccc cggccaagcg cccccgggag     3360

acgccgtcgc ctgccgaccc cccgggaggc gcgtccaagc cccgcaagct gctggtgtcc     3420

gagctggccg aggatcccgc atacgccatt gcccacggcg tcgccctgaa cacggactat     3480

tacttctccc acctgttggg ggcggcgtgc gtgacattca aggccctgtt tgggaataac     3540

gccaagatca ccgagagtct gttaaaaagg tttattcccg aagtgtggca ccccccggac     3600

gacgtggccg cgcggctccg gaccgcaggg ttcggggcgg tgggtgccgg cgctacggcg     3660

gaggaaactc gtcgaatgtt gcatagagcc tttgatactc tagcatgagc cccccgtcga     3720

agctgatgtc cctcatttta caataaa                                         3747


<210> 7
<211> 27
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 7
gccgggcgtc gtcgaggtcg tgggggt                                           27


<210> 8
<211> 27
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 8
atcgtcgtcg gctagaaagg cgggggt                                           27


<210> 9
<211> 27
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 9
gctccggtcc gtcctctccg tgggggt                                           27


<210> 10
<211> 27
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 10
acctggaatc ggacagcaac ggggagt                                           27


<210> 11
<211> 27
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 11
gccagccagg gtaagacccc gcggggt                                           27


<210> 12
<211> 27
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 12
gccgccgtcg cgcccacccc gcggggt                                           27


<210> 13
<211> 27
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 13
aagttttgcc tcaaacaagg cgggggt                                           27


<210> 14
<211> 27
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 14
acacgtgaaa gacggtgacg gtggggt                                           27


<210> 15
<211> 27
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 15
gcgtcccgac tggggcgagg taggggt                                           27


<210> 16
<211> 28
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 16
gaagttttgc ctcaaacaag gcgggggt                                          28


<210> 17
<211> 27
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 17
gcggcgtgga ccacgccccg gcggggt                                           27


<210> 18
<211> 28
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 18
gtgccccccc ggagaagcgc gccggggt                                          28


<210> 19
<211> 28
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 19
gacacgtgaa agacggtgac ggtggggt                                          28


<210> 20
<211> 28
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 20
gaccagccga aggtgacgaa cccggggt                                          28


<210> 21
<211> 27
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 21
ggccatcaag aagtacgagg gtggggt                                           27


<210> 22
<211> 28
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 22
gaaaccccaa aagccgcttg ggtgggat                                          28


<210> 23
<211> 28
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 23
gccacccgaa cccctaaaga ggggggat                                          28


<210> 24
<211> 28
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 24
gcatgccggc ccgggcgagc ctgggggt                                          28


<210> 25
<211> 28
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 25
gccatcccac ccaagcggct tttggggt                                          28


<210> 26
<211> 28
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 26
gtcaaggtcc cccccgggcc cctgggat                                          28


<210> 27
<211> 27
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 27
gtgtttgagg tcgccgggcc ggggggt                                           27


<210> 28
<211> 27
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 28
gccagccagg gtaagacccc gcggggt                                           27


<210> 29
<211> 27
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 29
gccgccgtcg cgcccacccc gcggggt                                           27


<210> 30
<211> 27
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 30
gagggtggga gaccggggtt ggggaat                                           27


<210> 31
<211> 27
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 31
gtcgggcgtc cgtcgtcgtg ccgggat                                           27


<210> 32
<211> 28
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 32
gcgggggttg tctgtgaagg gtagggat                                          28


<210> 33
<211> 28
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 33
gatcggcacc ccgtggttac ccgggggt                                          28


<210> 34
<211> 28
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 34
gcagacaacc cccgggtaac cacggggt                                          28


<210> 35
<211> 27
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 35
ggaccccgcg ttgccagccg ccggggt                                           27


<210> 36
<211> 27
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 36
gaaccccggc ggctggcaac gcggggt                                           27


<210> 37
<211> 27
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 37
gctgtcggct gccgtcgggg ctggggt                                           27


<210> 38
<211> 28
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 38
gacctggaat cggacagcaa cggggagt                                          28


<210> 39
<211> 27
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 39
gctccggtcc gtcctctccg tgggggt                                           27


<210> 40
<211> 27
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 40
gcgtctgggt gctgggtacg ccggggt                                           27


<210> 41
<211> 27
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 41
ggcggacgcc gtgggcgtcg caggggt                                           27


<210> 42
<211> 28
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 42
gtggttctgg gggcacgccg gcgggggt                                          28


<210> 43
<211> 27
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 43
gcaggctggg ctttggtcgg tgggggt                                           27


<210> 44
<211> 28
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 44
gcgccgtggg cgtcgcaggg gtcggggt                                          28


<210> 45
<211> 28
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 45
gtccgtccac cccgccccgg ggcggggt                                          28


<210> 46
<211> 28
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 46
gcgcttccgc ggggacccgg gcgggggt                                          28


<210> 47
<211> 28
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 47
gcgcccgggg ggcggaacta ggaggggt                                          28


<210> 48
<211> 27
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 48
ggcggctctc cgccggctcg ggggggt                                           27


<210> 49
<211> 27
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 49
gccgggcgtc gtcgaggtcg tgggggt                                           27


<210> 50
<211> 28
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 50
gccgctcgtc gcggtctggg ctcggggt                                          28


<210> 51
<211> 27
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 51
gggggtggtc ggggtcgtgg tcggggt                                           27


<210> 52
<211> 28
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 52
gatcgtcgtc ggctagaaag gcgggggt                                          28


<210> 53
<211> 27
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 53
ggcgcggcga caggcggtcc gtggggt                                           27


<210> 54
<211> 28
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 54
gcgaggccgc ggggtcgggc gtcgggat                                          28


<210> 55
<211> 27
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 55
gggtccgggg cggcgaggcc gcggggt                                           27


<210> 56
<211> 28
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 56
gcgcgaggcg cgggccgtcg ggcggggt                                          28


<210> 57
<211> 28
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 57
gcggacgacg aggacgagga cccggagt                                          28


<210> 58
<211> 27
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 58
gccgatgcgg ggcgatcctc cggggat                                           27


<210> 59
<211> 28
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 59
gtacgcggac gaagcgcggg agggggat                                          28


<210> 60
<211> 28
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 60
gcgcgtcgac ggcgggggtc gtcggggt                                          28


<210> 61
<211> 28
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 61
gcgctagttc cgcgtcgacg gcgggggt                                          28


<210> 62
<211> 158
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      polynucleotide

<400> 62
ctttatatat cttgtggaaa ggacgaaaca ccggagacgt gatatcacgt ctcagtttta       60

gtactctgga aacagaatct actaaaacaa ggcaaaatgc cgtgtttatc tcgtcaactt      120

gttggcgaga tttttgaatt cgtagactcg aggcgttg                              158


<210> 63
<211> 24
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      primer

<400> 63
tgaattcgta gactcgaggc gttg                                              24


<210> 64
<211> 57
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      primer

<400> 64
tcagcagaga gaagtttgtt gcgccggaac cgctagcctt gtacagctcg tccatgc          57


<210> 65
<211> 49
<212> DNA
<213> Herpes simplex virus 1 

<400> 65
cacgttctcc aggatgtcgt acacgtgaaa gacggtgacg gtggggttg                   49


<210> 66
<211> 45
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 66
cacgttctcc aggatgtcgt acacgtgaaa gacgckgtkg ggttg                       45


<210> 67
<211> 34
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 67
cacgttctcc aggatgtcgt acacgtgaaa gacg                                   34


<210> 68
<211> 46
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 68
cacgttctcc aggatgtcgt acacgtgaaa gacggcggtg gggttg                      46


<210> 69
<211> 35
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 69
cacgttctcc aggatgtcgt acacgtgaaa gacgg                                  35


<210> 70
<211> 47
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 70
cacgttctcc aggatgtcgt acacgtgaaa gacggtcgkt ggggttg                     47


<210> 71
<211> 38
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 71
cacgttctcc aggatgtcgt acacgtgaaa gacggttg                               38


<210> 72
<211> 36
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 72
cacgttctcc aggatgtcgt acacgtgaaa gacggt                                 36


