                         SEQUENCE LISTING

<110>  Griffith University
 
<120>  Arthrogenic Alphavirus Vaccine

<130>  160758PC/GS

<160>  24    

<170>  PatentIn version 3.5

<210>  1
<211>  261
<212>  PRT
<213>  Chikungunya virus

<400>  1

Met Glu Phe Ile Pro Thr Gln Thr Phe Tyr Asn Arg Arg Tyr Gln Pro 
1               5                   10                  15      


Arg Pro Trp Thr Pro Arg Pro Thr Ile Gln Val Ile Arg Pro Arg Pro 
            20                  25                  30          


Arg Pro Gln Arg Gln Ala Gly Gln Leu Ala Gln Leu Ile Ser Ala Val 
        35                  40                  45              


Asn Lys Leu Thr Met Arg Ala Val Pro Gln Gln Lys Pro Arg Arg Asn 
    50                  55                  60                  


Arg Lys Asn Lys Lys Gln Lys Gln Lys Gln Gln Ala Pro Gln Asn Asn 
65                  70                  75                  80  


Thr Asn Gln Lys Lys Gln Pro Pro Lys Lys Lys Pro Ala Gln Lys Lys 
                85                  90                  95      


Lys Lys Pro Gly Arg Arg Glu Arg Met Cys Met Lys Ile Glu Asn Asp 
            100                 105                 110         


Cys Ile Phe Glu Val Lys His Glu Gly Lys Val Thr Gly Tyr Ala Cys 
        115                 120                 125             


Leu Val Gly Asp Lys Val Met Lys Pro Ala His Val Lys Gly Thr Ile 
    130                 135                 140                 


Asp Asn Ala Asp Leu Ala Lys Leu Ala Phe Lys Arg Ser Ser Lys Tyr 
145                 150                 155                 160 


Asp Leu Glu Cys Ala Gln Ile Pro Val His Met Lys Ser Asp Ala Ser 
                165                 170                 175     


Lys Phe Thr His Glu Lys Pro Glu Gly Tyr Tyr Asn Trp His His Gly 
            180                 185                 190         


Ala Val Gln Tyr Ser Gly Gly Arg Phe Thr Ile Pro Thr Gly Ala Gly 
        195                 200                 205             


Lys Pro Gly Asp Ser Gly Arg Pro Ile Phe Asp Asn Lys Gly Arg Val 
    210                 215                 220                 


Val Ala Ile Val Leu Gly Gly Ala Asn Glu Gly Ala Arg Thr Ala Leu 
225                 230                 235                 240 


Ser Val Val Thr Trp Asn Lys Asp Ile Val Thr Lys Ile Thr Pro Glu 
                245                 250                 255     


Gly Ala Glu Glu Trp 
            260     


<210>  2
<211>  267
<212>  PRT
<213>  Semliki Forest virus

<400>  2

Met Asn Tyr Ile Pro Thr Gln Thr Phe Tyr Gly Arg Arg Trp Arg Pro 
1               5                   10                  15      


Arg Pro Ala Ala Arg Pro Trp Pro Leu Gln Ala Thr Pro Val Ala Pro 
            20                  25                  30          


Val Val Pro Asp Phe Gln Ala Gln Gln Met Gln Gln Leu Ile Ser Ala 
        35                  40                  45              


Val Asn Ala Leu Thr Met Arg Gln Asn Ala Ile Ala Pro Ala Arg Pro 
    50                  55                  60                  


Pro Lys Pro Lys Lys Lys Lys Thr Thr Lys Pro Lys Pro Lys Thr Gln 
65                  70                  75                  80  


Pro Lys Lys Ile Asn Gly Lys Thr Gln Gln Gln Lys Lys Lys Asp Lys 
                85                  90                  95      


Gln Ala Asp Lys Lys Lys Lys Lys Pro Gly Lys Arg Glu Arg Met Cys 
            100                 105                 110         


Met Lys Ile Glu Asn Asp Cys Ile Phe Glu Val Lys His Glu Gly Lys 
        115                 120                 125             


Val Thr Gly Tyr Ala Cys Leu Val Gly Asp Lys Val Met Lys Pro Ala 
    130                 135                 140                 


His Val Lys Gly Val Ile Asp Asn Ala Asp Leu Ala Lys Leu Ala Phe 
145                 150                 155                 160 


Lys Lys Ser Ser Lys Tyr Asp Leu Glu Cys Ala Gln Ile Pro Val His 
                165                 170                 175     


Met Arg Ser Asp Ala Ser Lys Tyr Thr His Glu Lys Pro Glu Gly His 
            180                 185                 190         


Tyr Asn Trp His His Gly Ala Val Gln Tyr Ser Gly Gly Arg Phe Thr 
        195                 200                 205             


Ile Pro Thr Gly Ala Gly Lys Pro Gly Asp Ser Gly Arg Pro Ile Phe 
    210                 215                 220                 


Asp Asn Lys Gly Arg Val Val Ala Ile Val Leu Gly Gly Ala Asn Glu 
225                 230                 235                 240 


Gly Ser Arg Thr Ala Leu Ser Val Val Thr Trp Asn Lys Asp Met Val 
                245                 250                 255     


Thr Arg Val Thr Pro Glu Gly Ser Glu Glu Trp 
            260                 265         


<210>  3
<211>  53
<212>  PRT
<213>  Chikungunya virus

<400>  3

Gln Gln Lys Pro Arg Arg Asn Arg Lys Asn Lys Lys Gln Lys Gln Lys 
1               5                   10                  15      


Gln Gln Ala Pro Gln Asn Asn Thr Asn Gln Lys Lys Gln Pro Pro Lys 
            20                  25                  30          


Lys Lys Pro Ala Gln Lys Lys Lys Lys Pro Gly Arg Arg Glu Arg Met 
        35                  40                  45              


Cys Met Lys Ile Glu 
    50              


<210>  4
<211>  53
<212>  PRT
<213>  Chikungunya virus

<400>  4

Gln Gln Lys Pro Ala Ala Asn Ala Ala Asn Ala Ala Gln Lys Gln Lys 
1               5                   10                  15      


Gln Gln Ala Pro Gln Asn Asn Thr Asn Gln Lys Lys Gln Pro Pro Lys 
            20                  25                  30          


Lys Lys Pro Ala Gln Lys Lys Lys Lys Pro Gly Arg Arg Glu Arg Met 
        35                  40                  45              


Cys Met Lys Ile Glu 
    50              


<210>  5
<211>  53
<212>  PRT
<213>  Chikungunya virus

<400>  5

Gln Gln Lys Pro Arg Arg Asn Arg Lys Asn Lys Lys Gln Lys Gln Lys 
1               5                   10                  15      


Gln Gln Ala Pro Gln Asn Asn Thr Asn Gln Ala Ala Gln Pro Pro Lys 
            20                  25                  30          


Lys Lys Pro Ala Gln Ala Ala Lys Lys Pro Gly Ala Ala Glu Arg Met 
        35                  40                  45              


Cys Met Lys Ile Glu 
    50              


<210>  6
<211>  53
<212>  PRT
<213>  Chikungunya virus

<400>  6

Gln Gln Lys Pro Ala Ala Asn Ala Ala Asn Ala Ala Gln Lys Gln Lys 
1               5                   10                  15      


Gln Gln Ala Pro Gln Asn Asn Thr Asn Gln Lys Lys Gln Pro Pro Lys 
            20                  25                  30          


Lys Lys Pro Ala Gln Lys Lys Lys Lys Pro Gly Ala Ala Glu Arg Met 
        35                  40                  45              


Cys Met Lys Ile Glu 
    50              


<210>  7
<211>  53
<212>  PRT
<213>  Chikungunya virus

<400>  7

Gln Gln Lys Pro Ala Ala Asn Ala Ala Asn Ala Ala Gln Lys Gln Lys 
1               5                   10                  15      


Gln Gln Ala Pro Gln Asn Asn Thr Asn Gln Lys Lys Gln Pro Pro Lys 
            20                  25                  30          


Lys Lys Pro Ala Gln Ala Ala Lys Lys Pro Gly Ala Ala Glu Arg Met 
        35                  40                  45              


Cys Met Lys Ile Glu 
    50              


<210>  8
<211>  32
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Oligonucleotide

<400>  8
gcggcgcaag cttatggagt tcatcccaac cc                                     32


<210>  9
<211>  27
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Based on CHIKV Capsid Protein sequence

<400>  9
cgcggatccg actcttcggc cccctcg                                           27


<210>  10
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Based on CHIKV Capsid Protein sequence

<400>  10
cgcggatccg accactcttc ggcc                                              24


<210>  11
<211>  43
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Oligonucleotide

<400>  11
caaaacaaca caaatcaagc ggcgcagcca cctaaaaaga aac                         43


<210>  12
<211>  43
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Oligonucleotide

<400>  12
gttttgttgt gtttagttcg ccgcgtcggt ggatttttct ttg                         43


<210>  13
<211>  31
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Oligonucleotide

<400>  13
gaaaccggct caagcggcaa agaagccggg c                                      31


<210>  14
<211>  31
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Oligonucleotide

<400>  14
ctttggccga gttcgccgtt tcttcggccc g                                      31


<210>  15
<211>  38
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Oligonucleotide

<400>  15
gaagccgggc gccgcagaga ggatgtgcat gaaaatcg                               38


<210>  16
<211>  38
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Oligonucleotide

<400>  16
cttcggcccg cggcgtctct cctacacgta cttttagc                               38


<210>  17
<211>  42
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Oligonucleotide

<400>  17
gcggtacccc aacagaagcc agccgcgaat cggaagaata ag                          42


<210>  18
<211>  42
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Oligonucleotide

<400>  18
cgccatgggg ttgtcttcgg tcggcgctta gccttcttat tc                          42


<210>  19
<211>  42
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Oligonucleotide

<400>  19
gaatcggaag aatgcggcgc aaaagcaaaa acaacaggcg cc                          42


<210>  20
<211>  42
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Oligonucleotide

<400>  20
cttagccttc ttacgccgcg ttttcgtttt tgttgtccgc gg                          42


<210>  21
<211>  32
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Oligonucleotide

<400>  21
cagccgcgaa tgcggcgaat gcggcgcaaa ag                                     32


<210>  22
<211>  32
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Oligonucleotide

<400>  22
gtcggcgctt acgccgctta cgccgcgttt tc                                     32


<210>  23
<211>  18
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Oligonucleotide

<400>  23
cccggtaaga gcggtgaa                                                     18


<210>  24
<211>  17
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Oligonucleotide

<400>  24
cttccggtat gtcgatg                                                      17


