                               SEQUENCE LISTING

<110> TROVAGENE, INC.
 
<120> OLIGONUCLEOTIDE SEQUENCES FOR DETECTION OF LOW ABUNDANCE TARGET 
      SEQUENCES AND KITS THEREOF

<130> 140195WO

<140> PCT/US2017/033401
<141> 2017-05-18

<150> 62/370,924
<151> 2016-08-04

<150> 62/339,537
<151> 2016-05-20

<160> 35    

<170> PatentIn version 3.5

<210> 1
<211> 22
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 1
acactgacga catggttcta ca                                                22


<210> 2
<211> 22
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 2
tacggtagca gagacttggt ct                                                22


<210> 3
<211> 35
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 3
acactgacga catggttcta caggtagttg gagct                                  35


<210> 4
<211> 35
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 4
tacggtagca gagacttggt ctactcttgc ctacg                                  35


<210> 5
<211> 13
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 5
tacgccacca gct                                                          13


<210> 6
<211> 41
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 6
acactgacga catggttcta cactccaccg tgcarctcat c                           41


<210> 7
<211> 38
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 7
tacggtagca gagacttggt ctggcagccg aagggcat                               38


<210> 8
<211> 14
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 8
ctcatcacgc agct                                                         14


<210> 9
<211> 42
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 9
acactgacga catggttcta caccctcctt ctggccacca tg                          42


<210> 10
<211> 41
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 10
acactgacga catggttcta caccacactg acgtgcctct c                           41


<210> 11
<211> 41
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 11
acactgacga catggttcta caaccatgcg aagccacact g                           41


<210> 12
<211> 42
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 12
tacggtagca gagacttggt ctatgtgagg atcctggctc ct                          42


<210> 13
<211> 45
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 13
tacggtagca gagacttggt ctccgtatct cccttccctg attac                       45


<210> 14
<211> 42
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 14
tacggtagca gagacttggt ctcccgtatc tcccttccct ga                          42


<210> 15
<211> 39
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 15
acactgacga catggttcta cagcatgtca agatcacag                              39


<210> 16
<211> 38
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 16
tacggtagca gagacttggt ctcgcaccca gcagtttg                               38


<210> 17
<211> 15
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 17
attttgggct ggcca                                                        15


<210> 18
<211> 38
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 18
acactgacga catggttcta caaattcccg tcgctatc                               38


<210> 19
<211> 39
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 19
tacggtagca gagacttggt ctttccttgt tggctttcg                              39


<210> 20
<211> 20
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 20
atgttgcttc tcttaattcc                                                   20


<210> 21
<211> 42
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 21
acactgacga catggttcta caggcaccat ctcacaattg cc                          42


<210> 22
<211> 42
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 22
acactgacga catggttcta cacagatcac tgggcagcat gt                          42


<210> 23
<211> 42
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 23
acactgacga catggttcta caagcatgtg gcaccatctc ac                          42


<210> 24
<211> 42
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 24
acactgacga catggttcta cagcatgtgg caccatctca ca                          42


<210> 25
<211> 42
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 25
tacggtagca gagacttggt ctagaaaagg tgggcctgag gt                          42


<210> 26
<211> 42
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 26
tacggtagca gagacttggt ctaaaaggtg ggcctgaggt tc                          42


<210> 27
<211> 41
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 27
tacggtagca gagacttggt ctgtgggcct gaggttcaga g                           41


<210> 28
<211> 42
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide

<400> 28
tacggtagca gagacttggt ctgcatgtgg caccatctca ca                          42


<210> 29
<211> 46
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide


<220>
<221> modified_base
<222> (25)..(25)
<223> a, c, t, g, unknown or other

<220>
<221> modified_base
<222> (40)..(40)
<223> a, c, t, g, unknown or other

<400> 29
acactgacga catggttcta caaantaggt gattttggtn ctagct                      46


<210> 30
<211> 38
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide


<220>
<221> modified_base
<222> (27)..(27)
<223> a, c, t, g, unknown or other

<220>
<221> modified_base
<222> (30)..(30)
<223> a, c, t, g, unknown or other

<400> 30
acactgacga catggttcta cattggntcn tagctaca                               38


<210> 31
<211> 41
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide


<220>
<221> modified_base
<222> (27)..(27)
<223> a, c, t, g, unknown or other

<220>
<221> modified_base
<222> (36)..(36)
<223> a, c, t, g, unknown or other

<400> 31
tacggtagca gagacttggt ctcccanctc catcgnagat t                           41


<210> 32
<211> 38
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide


<220>
<221> modified_base
<222> (31)..(31)
<223> a, c, t, g, unknown or other

<220>
<221> modified_base
<222> (33)..(33)
<223> a, c, t, g, unknown or other

<400> 32
tacggtagca gagacttggt ctactccatc ngnagatt                               38


<210> 33
<211> 29
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      oligonucleotide


<220>
<221> modified_base
<222> (3)..(3)
<223> a, c, t, g, unknown or other

<220>
<221> modified_base
<222> (7)..(7)
<223> a, c, t, g, unknown or other

<220>
<221> modified_base
<222> (9)..(9)
<223> a, c, t, g, unknown or other

<220>
<221> modified_base
<222> (12)..(12)
<223> a, c, t, g, unknown or other

<220>
<221> modified_base
<222> (14)..(14)
<223> a, c, t, g, unknown or other

<220>
<221> modified_base
<222> (16)..(16)
<223> a, c, t, g, unknown or other

<220>
<221> modified_base
<222> (20)..(20)
<223> a, c, t, g, unknown or other

<220>
<221> modified_base
<222> (22)..(22)
<223> a, c, t, g, unknown or other

<220>
<221> modified_base
<222> (25)..(25)
<223> a, c, t, g, unknown or other

<220>
<221> modified_base
<222> (27)..(27)
<223> a, c, t, g, unknown or other

<400> 33
ctnccantnc gnangnattn tncancntg                                         29


<210> 34
<211> 298
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      polynucleotide

<400> 34
cccctccttc tggccaccat gcgaagccac actgacgtgc ctctcccagg tagcaggaag       60

cctacgtgat ggccagcgtg gacaaccccc acgtgtgccg cctgctgggc atctgcctca      120

cctccaccgt gcaactcatc acgcagctca tgcccttcgg ctgcctcctg gactatgtcc      180

gggaacacaa agacaatatt ggctcccagt acctgctcaa ctggtgtgtg cagatcgcaa      240

aggtaatcag ggaagggaga tacggggagg ggagataagg agccaggatc ctcacatg        298


<210> 35
<211> 240
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      polynucleotide

<400> 35
ccacccagat cactgggcag catgtggcac catctcacaa ttgccagtag gtagcttcct       60

tctctctctg tcatagggac tctggatccc agaaggtgag aaagttaaaa ttcccgtcgc      120

tatcaaggaa ttaagagaag caacatctcc gaaagccaac aaggaaatcc tcgatgtgag      180

tttctgcttt gctgtgtggg ggtccatggc tctgaacctc aggcccacct tttctcatgt      240


