                         SEQUENCE LISTING

<110>  MIBMIK
 
<120>  RNazy MiniIII, sposoby zmiany specyficznoci cicia sekwencji RNA
        przez RNazy MiniIII oraz ich zastosowania

<130>  PZ/3534/AGR/PCT

<160>  103   

<170>  PatentIn version 3.5

<210>  1
<211>  143
<212>  PRT
<213>  Bacillus subtilis

<400>  1

Met Leu Glu Phe Asp Thr Ile Lys Asp Ser Lys Gln Leu Asn Gly Leu 
1               5                   10                  15      


Ala Leu Ala Tyr Ile Gly Asp Ala Ile Phe Glu Val Tyr Val Arg His 
            20                  25                  30          


His Leu Leu Lys Gln Gly Phe Thr Lys Pro Asn Asp Leu His Lys Lys 
        35                  40                  45              


Ser Ser Arg Ile Val Ser Ala Lys Ser Gln Ala Glu Ile Leu Phe Phe 
    50                  55                  60                  


Leu Gln Asn Gln Ser Phe Phe Thr Glu Glu Glu Glu Ala Val Leu Lys 
65                  70                  75                  80  


Arg Gly Arg Asn Ala Lys Ser Gly Thr Thr Pro Lys Asn Thr Asp Val 
                85                  90                  95      


Gln Thr Tyr Arg Tyr Ser Thr Ala Phe Glu Ala Leu Leu Gly Tyr Leu 
            100                 105                 110         


Phe Leu Glu Lys Lys Glu Glu Arg Leu Ser Gln Leu Val Ala Glu Ala 
        115                 120                 125             


Ile Gln Phe Gly Thr Ser Gly Arg Lys Thr Asn Glu Ser Ala Thr 
    130                 135                 140             


<210>  2
<211>  132
<212>  PRT
<213>  Caldicellulosiruptor kristjanssonii

<400>  2

Met Leu Ser Pro Leu Val Tyr Ala Tyr Ile Gly Asp Ala Val Tyr Glu 
1               5                   10                  15      


Leu Phe Val Arg Asn Lys Ile Ile Ala Glu Asn Pro Asp Leu Thr Pro 
            20                  25                  30          


Tyr Leu Tyr Tyr Leu Arg Thr Thr Met Tyr Val Lys Ala Ser Ser Gln 
        35                  40                  45              


Ala Met Ala Ile Lys Lys Leu Tyr Glu Glu Leu Asp Glu Asp Glu Lys 
    50                  55                  60                  


Arg Ile Val Lys Arg Gly Arg Asn Ala Lys Pro Lys Thr Ile Pro Arg 
65                  70                  75                  80  


Asn Ala Lys Leu Ser Asp Tyr Lys Tyr Ala Thr Ala Leu Glu Ala Leu 
                85                  90                  95      


Ile Gly Tyr Leu Tyr Leu Ala Asn Asn Ile Glu Arg Leu Asn Tyr Ile 
            100                 105                 110         


Leu Ser Gln Thr Tyr Asp Ile Ile Thr Glu Glu Tyr Ser Asn Ala Lys 
        115                 120                 125             


Asn Ser Cys Gln 
    130         


<210>  3
<211>  399
<212>  DNA
<213>  Caldicellulosiruptor kristjanssonii

<400>  3
atgcttagtc ctttagtata tgcttatatt ggagatgcag tatatgagtt gtttgtaaga       60

aacaaaataa tagctgaaaa tccagatttg accccctacc tatactatct tagaactact      120

atgtatgtaa aagcttcgag tcaagcaatg gctataaaaa aattatatga agagcttgat      180

gaagatgaaa aaagaattgt aaagagaggc agaaatgcaa aaccaaaaac cattcccaga      240

aatgccaagt tgagtgatta taaatatgcc acggcccttg aggcactaat tggttatctt      300

tatttagcaa ataacattga gagattaaat tatattcttt cacaaacgta tgatataata      360

actgaagaat acagcaatgc caagaatagc tgtcaataa                             399


<210>  4
<211>  125
<212>  PRT
<213>  Clostridium ramosum

<400>  4

Met Gly Pro Glu Leu Ile Asn Ala Ser Val Leu Ala Tyr Leu Gly Asp 
1               5                   10                  15      


Ser Ile Phe Glu Val Leu Val Arg Asp Tyr Leu Val Lys Glu Ser Gly 
            20                  25                  30          


Phe Val Lys Pro Asn Asp Leu Gln Arg Glu Ala Val Lys Tyr Val Ser 
        35                  40                  45              


Ala Ser Ser His Ala Ala Phe Met His Asp Met Leu Asp Glu Glu Phe 
    50                  55                  60                  


Phe Ser Ala Asp Glu Val Gly Thr Tyr Lys Arg Gly Arg Asn Thr Lys 
65                  70                  75                  80  


Gly Ser Lys Asn Glu Ser Leu Asp His Met His Ser Thr Gly Phe Glu 
                85                  90                  95      


Ala Val Ile Gly Thr Leu Tyr Leu Glu Glu Asn Phe Asp Arg Ile Lys 
            100                 105                 110         


Val Ile Phe Glu Arg Tyr Lys Gln Tyr Ile Asn Asn Lys 
        115                 120                 125 


<210>  5
<211>  378
<212>  DNA
<213>  Clostridium ramosum

<400>  5
atgggccctg aactgattaa tgcaagcgtt ctggcatatc tgggtgatag catttttgaa       60

gttctggtgc gtgattatct ggtgaaagaa agcggttttg tgaaaccgaa tgatctgcag      120

cgtgaagccg ttaaatatgt tagcgcaagc agccatgcag catttatgca tgatatgctg      180

gatgaagaat ttttcagcgc agatgaagtt ggcacctata aacgtggtcg taataccaaa      240

ggtagcaaaa atgaaagcct ggatcatatg catagcaccg gttttgaagc agttattggc      300

accctgtatc tggaagaaaa tttcgatcgc atcaaagtga tcttcgagcg ctataaacag      360

tacatcaaca acaaataa                                                    378


<210>  6
<211>  140
<212>  PRT
<213>  Clostridium thermocellum

<400>  6

Met Val Trp Glu Phe Phe Asp Lys Ile Thr Gly Glu Phe Asn Tyr Lys 
1               5                   10                  15      


Pro Asp Glu Val Ser Gln Leu Ser Pro Leu Val Leu Ala Tyr Ile Gly 
            20                  25                  30          


Asp Ala Val Tyr Glu Val Phe Ile Arg Thr Met Leu Val Ser Gly Gly 
        35                  40                  45              


Asn Val Pro Val His Val Leu His Lys Arg Ser Ile Ala Tyr Val Lys 
    50                  55                  60                  


Ala Lys Ala Gln Ser Asp Ile Val His Arg Ile Met Pro Leu Leu Thr 
65                  70                  75                  80  


Glu Glu Glu Leu Asn Ile Val Arg Arg Gly Arg Asn Ala Lys Ser Ala 
                85                  90                  95      


Thr Val Pro Lys Asn Ala Asp Ile Thr Asp Tyr Arg Tyr Ala Thr Gly 
            100                 105                 110         


Phe Glu Ser Leu Leu Gly Phe Leu Tyr Leu Lys Lys Asp Tyr Asp Arg 
        115                 120                 125             


Leu Met Asp Ile Leu Arg Met Ala Val Ser Gln Asn 
    130                 135                 140 


<210>  7
<211>  423
<212>  DNA
<213>  Clostridium thermocellum

<400>  7
atggtttggg aattttttga caaaattaca ggtgagttta attacaaacc ggatgaagta       60

agccaactgt cgcctttagt gcttgcatac ataggtgacg ccgtgtatga ggttttcatc      120

cgtacaatgc ttgtgtccgg aggaaacgta ccggtacatg ttctccataa gcgctccatt      180

gcttatgtca aagcaaaggc acagtcggat attgtccaca ggataatgcc tttgctgacg      240

gaggaggagc ttaatattgt ccgcagggga aggaacgcca aatcggccac ggttccgaaa      300

aatgcggata ttacggatta caggtatgct accggttttg agtctttgtt gggttttctt      360

tatttgaaaa aagattatga ccgattgatg gatatattgc gaatggctgt ttcacagaat      420

tga                                                                    423


<210>  8
<211>  134
<212>  PRT
<213>  Faecalibacterium prausnitzii

<400>  8

Met Asn Glu Ser Glu Lys Ile Asp Pro Arg Glu Leu Ser Pro Leu Ala 
1               5                   10                  15      


Leu Ala Phe Val Gly Asp Ser Val Leu Glu Leu Leu Val Arg Gln Arg 
            20                  25                  30          


Leu Val Glu His His Arg Leu Ser Ala Gly Lys Leu Asn Ala Glu Lys 
        35                  40                  45              


Val Lys Tyr Val Ser Ala Lys Ala Gln Phe Arg Glu Glu Gln Leu Leu 
    50                  55                  60                  


Glu Pro Leu Phe Thr Glu Asp Glu Leu Ala Val Phe Lys Arg Gly Arg 
65                  70                  75                  80  


Asn Ala Ser Lys Ala Ser Val Ala Lys His Ala Ser Pro Glu Glu Tyr 
                85                  90                  95      


Arg Ala Ser Thr Gly Phe Glu Cys Leu Leu Gly Trp Leu Tyr Leu Asn 
            100                 105                 110         


Gly Gln Leu Glu Arg Val His Gln Leu Phe Glu Val Leu Trp Gln Gln 
        115                 120                 125             


Phe Asp Pro Asp Gln Lys 
    130                 


<210>  9
<211>  405
<212>  DNA
<213>  Faecalibacterium prausnitzii

<400>  9
atgaatgaaa gcgaaaaaat tgatccgcgt gaactgagtc cgctggcact ggcatttgtt       60

ggtgatagcg ttctggaact gctggttcgt cagcgtctgg ttgaacatca tcgtctgagc      120

gcaggtaaac tgaatgcaga aaaagttaaa tacgttagcg ccaaagcaca gtttcgtgaa      180

gaacagctgc tggaaccgct gtttaccgaa gatgaactgg cagtttttaa acgtggtcgt      240

aatgcaagca aagcaagcgt tgcaaaacat gcaagtccgg aagaatatcg tgcaagcacc      300

ggttttgaat gtctgctggg ttggctgtat ctgaatggtc agctggaacg tgttcatcag      360

ctgtttgaag ttctgtggca gcagtttgat cctgatcaga aataa                      405


<210>  10
<211>  129
<212>  PRT
<213>  Fusobacterium nucleatum subsp. nucleatum

<400>  10

Met Asp Asn Val Asp Phe Ser Lys Asp Ile Arg Asp Tyr Ser Gly Leu 
1               5                   10                  15      


Glu Leu Ala Phe Leu Gly Asp Ala Ile Trp Glu Leu Glu Ile Arg Lys 
            20                  25                  30          


Tyr Tyr Leu Gln Phe Gly Tyr Asn Ile Pro Thr Leu Asn Lys Tyr Val 
        35                  40                  45              


Lys Ala Lys Val Asn Ala Lys Tyr Gln Ser Leu Ile Tyr Lys Lys Ile 
    50                  55                  60                  


Ile Asn Asp Leu Asp Glu Glu Phe Lys Val Ile Gly Lys Arg Ala Lys 
65                  70                  75                  80  


Asn Ser Asn Ile Lys Thr Phe Pro Arg Ser Cys Thr Val Met Glu Tyr 
                85                  90                  95      


Lys Glu Ala Thr Ala Leu Glu Ala Ile Ile Gly Ala Met Tyr Leu Leu 
            100                 105                 110         


Lys Lys Glu Glu Glu Ile Lys Lys Ile Ile Asn Ile Val Ile Lys Gly 
        115                 120                 125             


Glu 
    


<210>  11
<211>  390
<212>  DNA
<213>  Fusobacterium nucleatum subsp. nucleatum

<400>  11
atggacaatg tagatttttc aaaggatata agagattaca gtggactgga attagcattt       60

ttaggagatg ctatttggga actggaaata agaaaatatt acttacaatt tggctataat      120

attcctactt taaataaata tgttaaagct aaggtaaatg caaaatatca aagtctgatt      180

tataagaaaa ttataaatga tttagatgaa gaatttaaag ttataggaaa aagagctaaa      240

aatagtaaca taaaaacttt tccaaggagt tgtacagtga tggaatataa ggaagcgaca      300

gccttagaag ctattatcgg agcaatgtat ttgttaaaaa aagaagaaga aataaaaaaa      360

attataaata tagttataaa gggagaatga                                       390


<210>  12
<211>  132
<212>  PRT
<213>  Staphylococcus epidermidis

<400>  12

Met Ala Lys His Met Asn Val Lys Leu Leu Asn Pro Leu Thr Leu Ala 
1               5                   10                  15      


Tyr Met Gly Asp Ala Val Leu Asp Gln His Val Arg Glu Tyr Ile Val 
            20                  25                  30          


Leu Lys Leu Gln Ser Lys Pro His Arg Leu His Gln Val Ser Lys Ser 
        35                  40                  45              


Tyr Val Ser Ala Lys Ser Gln Ala Lys Thr Leu Glu Tyr Leu Leu Asp 
    50                  55                  60                  


Ile Asp Trp Phe Thr Glu Glu Glu Leu Ser Val Leu Lys Arg Gly Arg 
65                  70                  75                  80  


Asn Ala Lys Ser Tyr Thr Lys Ala Lys Asn Thr Asp Ile Gln Thr Tyr 
                85                  90                  95      


Arg Lys Ser Ser Ala Leu Glu Ala Val Ile Gly Phe Leu Tyr Leu Asp 
            100                 105                 110         


His Gln Ser Glu Arg Leu Glu Asn Leu Leu Glu Thr Ile Val Arg Ile 
        115                 120                 125             


Val Asp Glu Arg 
    130         


<210>  13
<211>  399
<212>  DNA
<213>  Staphylococcus epidermidis

<400>  13
atggctaaac atatgaacgt aaaacttctt aatcctttaa cattggcata tatgggtgat       60

gcagtacttg atcaacatgt gcgtgaatat atcgtgctaa aattacaaag taaacctcat      120

cgtttgcacc aagtatcgaa aagttacgtt tcagcgaaaa gtcaagctaa gactttagag      180

tatttgttag atattgactg gtttacagag gaagagctaa gtgttttaaa acgaggacgt      240

aacgctaaaa gttatacaaa agctaaaaat actgacattc aaacttatcg taaaagttca      300

gcgttagaag ctgttatcgg atttttatat ttagaccatc aatcagaacg attagaaaac      360

ttattagaaa caattgttag gatagtggat gaaaggtaa                             399


<210>  14
<211>  140
<212>  PRT
<213>  Thermotoga maritima

<400>  14

Met Glu Lys Leu Phe Arg Phe Glu Ala Glu Pro Glu Lys Leu Pro Pro 
1               5                   10                  15      


Ala Val Leu Ala Tyr Leu Gly Asp Ala Val Leu Glu Leu Ile Phe Arg 
            20                  25                  30          


Ser Arg Phe Thr Gly Asp Tyr Arg Met Ser Val Ile His Glu Arg Val 
        35                  40                  45              


Lys Glu His Thr Ser Lys His Gly Gln Ala Trp Met Leu Glu Asn Ile 
    50                  55                  60                  


Trp Asn Leu Leu Asp Glu Arg Glu Gln Glu Ile Val Lys Arg Ala Met 
65                  70                  75                  80  


Asn Ser Lys Ala Ala Lys Arg His Gly Asn Asp Pro Thr Tyr Arg Lys 
                85                  90                  95      


Ser Thr Gly Phe Glu Ala Leu Ile Gly Tyr Leu Phe Leu Lys Arg Glu 
            100                 105                 110         


Phe Asp Arg Ile Glu Glu Leu Leu Arg Val Val Met Asp Leu Glu Ser 
        115                 120                 125             


Leu Arg Lys Lys Asn Pro Gly Gly Ser Ala Gln Glu 
    130                 135                 140 


<210>  15
<211>  423
<212>  DNA
<213>  Thermotoga maritima

<400>  15
atggaaaaac tcttcagatt cgaagcagaa ccggagaaac tgccaccggc cgttctagcg       60

tatctgggag atgccgttct ggagctcatc ttcagatcga gattcacagg agattacaga      120

atgtccgtca tacacgagag ggtcaaggaa cacacctcga aacacggtca ggcatggatg      180

ctggagaata tatggaatct cctcgacgaa agagagcaag aaatagttaa aagagcgatg      240

aattcgaagg cagcgaaaag acacgggaac gaccctacat acagaaagag caccggtttc      300

gaagctttga tcgggtatct attcttgaaa agagaattcg acagaattga agaactgctt      360

cgggtggtga tggatcttga gagtctacgg aagaaaaatc ctggaggaag cgctcaggaa      420

taa                                                                    423


<210>  16
<211>  136
<212>  PRT
<213>  Thermoanaerobacter tengcongensis

<400>  16

Met Glu Lys Asp Lys Met Ile Leu Val Lys Glu Lys Gly Val Leu Asp 
1               5                   10                  15      


Leu Ser Pro Leu Val Leu Ala Phe Ile Gly Asp Ala Val Tyr Ser Leu 
            20                  25                  30          


Tyr Val Arg Thr Lys Ile Val Glu Lys Gly Asn Met Lys Leu Ala His 
        35                  40                  45              


Leu Asn Glu Gln Thr Val Lys Tyr Val Lys Ala Ser Ser Gln Ala Arg 
    50                  55                  60                  


Ser Leu Glu Arg Ile Tyr Asp Leu Leu Thr Glu Glu Glu Lys Glu Ile 
65                  70                  75                  80  


Val Arg Arg Gly Arg Asn Ala Lys Ala Ser Thr Val Pro Lys Gly Ala 
                85                  90                  95      


Ser Val Lys Glu Tyr Lys Tyr Ala Thr Ala Phe Glu Ala Leu Val Gly 
            100                 105                 110         


Tyr Leu Tyr Leu Leu Glu Arg Phe Asp Arg Leu Tyr Phe Leu Leu Ser 
        115                 120                 125             


Leu Ser Met Glu Tyr Thr Glu Glu 
    130                 135     


<210>  17
<211>  477
<212>  DNA
<213>  Thermoanaerobacter tengcongensis

<400>  17
atgggcagca gccatcatca tcatcatcac agcagcggcc tggaagttct gttccagggg       60

ccccatatgg aaaaggataa gatgattctt gtaaaggaaa agggggtttt agacttatcc      120

ccccttgttt tggctttcat tggagatgcg gtttacagcc tttatgtcag aactaagatt      180

gtggagaaag ggaatatgaa attggctcat ttaaatgagc aaactgtgaa gtacgttaag      240

gcatcttcac aggctaggtc tcttgagcga atttacgacc ttctcactga agaagaaaag      300

gaaattgtga gaaggggaag aaatgccaaa gcttctacag ttccaaaagg agcaagtgtt      360

aaagagtata agtatgccac tgcctttgaa gcattagtgg gatatttgta ccttttagaa      420

agatttgata ggctttactt tcttttgagc ctttctatgg aatacacgga agaatga         477


<210>  18
<211>  140
<212>  PRT
<213>  artificial

<220>
<223>  AA sequence of chimeric protein Ct(FpH)

<400>  18

Met Val Trp Glu Phe Phe Asp Lys Ile Thr Gly Glu Phe Asn Tyr Lys 
1               5                   10                  15      


Pro Asp Glu Val Ser Gln Leu Ser Pro Leu Val Leu Ala Tyr Ile Gly 
            20                  25                  30          


Asp Ala Val Tyr Glu Val Phe Ile Arg Thr Met Leu Val Ser Gly Gly 
        35                  40                  45              


Asn Val Pro Val His Val Leu Asn Ala Glu Lys Val Lys Tyr Val Lys 
    50                  55                  60                  


Ala Lys Ala Gln Ser Asp Ile Val His Arg Ile Met Pro Leu Leu Thr 
65                  70                  75                  80  


Glu Glu Glu Leu Asn Ile Val Arg Arg Gly Arg Asn Ala Lys Ser Ala 
                85                  90                  95      


Thr Val Pro Lys Asn Ala Asp Ile Thr Asp Tyr Arg Tyr Ala Thr Gly 
            100                 105                 110         


Phe Glu Ser Leu Leu Gly Phe Leu Tyr Leu Lys Lys Asp Tyr Asp Arg 
        115                 120                 125             


Leu Met Asp Ile Leu Arg Met Ala Val Ser Gln Asn 
    130                 135                 140 


<210>  19
<211>  423
<212>  DNA
<213>  artificial

<220>
<223>  NA sequence of chimeric protein Ct(FpH)

<400>  19
atggtttggg aattttttga caaaattaca ggtgagttta attacaaacc ggatgaagta       60

agccaactgt cgcctttagt gcttgcatac ataggtgacg ccgtgtatga ggttttcatc      120

cgtacaatgc ttgtgtccgg aggaaacgta ccggtacatg ttctgaatgc agaaaaagtt      180

aaatatgtca aagcaaaggc acagtcggat attgtccaca ggataatgcc tttgctgacg      240

gaggaggagc ttaatattgt ccgcagggga aggaacgcca aatcggccac ggttccgaaa      300

aatgcggata ttacggatta caggtatgct accggttttg agtctttgtt gggttttctt      360

tatttgaaaa aagattatga ccgattgatg gatatattgc gaatggctgt ttcacagaat      420

taa                                                                    423


<210>  20
<211>  140
<212>  PRT
<213>  artificial

<220>
<223>  AA sequence of chimeric protein Ct(FpL)

<400>  20

Met Val Trp Glu Phe Phe Asp Lys Ile Thr Gly Glu Phe Asn Tyr Lys 
1               5                   10                  15      


Pro Asp Glu Val Ser Gln Leu Ser Pro Leu Val Leu Ala Tyr Ile Gly 
            20                  25                  30          


Asp Ala Val Tyr Glu Val Phe Ile Arg Thr Met Leu Val Ser Gly Gly 
        35                  40                  45              


Asn Val Pro Val His Val Leu His Lys Arg Ser Ile Ala Tyr Val Lys 
    50                  55                  60                  


Ala Lys Ala Gln Ser Asp Ile Val His Arg Ile Met Pro Leu Leu Thr 
65                  70                  75                  80  


Glu Glu Glu Leu Asn Ile Val Arg Arg Gly Arg Asn Ala Ser Lys Ala 
                85                  90                  95      


Ser Val Ala Lys His Ala Ser Pro Glu Glu Tyr Arg Tyr Ala Thr Gly 
            100                 105                 110         


Phe Glu Ser Leu Leu Gly Phe Leu Tyr Leu Lys Lys Asp Tyr Asp Arg 
        115                 120                 125             


Leu Met Asp Ile Leu Arg Met Ala Val Ser Gln Asn 
    130                 135                 140 


<210>  21
<211>  423
<212>  DNA
<213>  artificial

<220>
<223>  NA sequence of chimeric protein Ct(FpL)

<400>  21
atggtttggg aattttttga caaaattaca ggtgagttta attacaaacc ggatgaagta       60

agccaactgt cgcctttagt gcttgcatac ataggtgacg ccgtgtatga ggttttcatc      120

cgtacaatgc ttgtgtccgg aggaaacgta ccggtacatg ttctccataa gcgctccatt      180

gcttatgtca aagcaaaggc acagtcggat attgtccaca ggataatgcc tttgctgacg      240

gaggaggagc ttaatattgt ccgcagggga aggaacgcgt caaaagcaag cgttgcaaaa      300

catgcaagtc cggaagaata caggtatgct accggttttg agtctttgtt gggttttctt      360

tatttgaaaa aagattatga ccgattgatg gatatattgc gaatggctgt ttcacagaat      420

taa                                                                    423


<210>  22
<211>  140
<212>  PRT
<213>  artificial

<220>
<223>  AA sequence of chimeric protein Ct(FpHL)

<400>  22

Met Val Trp Glu Phe Phe Asp Lys Ile Thr Gly Glu Phe Asn Tyr Lys 
1               5                   10                  15      


Pro Asp Glu Val Ser Gln Leu Ser Pro Leu Val Leu Ala Tyr Ile Gly 
            20                  25                  30          


Asp Ala Val Tyr Glu Val Phe Ile Arg Thr Met Leu Val Ser Gly Gly 
        35                  40                  45              


Asn Val Pro Val His Val Leu Asn Ala Glu Lys Val Lys Tyr Val Lys 
    50                  55                  60                  


Ala Lys Ala Gln Ser Asp Ile Val His Arg Ile Met Pro Leu Leu Thr 
65                  70                  75                  80  


Glu Glu Glu Leu Asn Ile Val Arg Arg Gly Arg Asn Ala Ser Lys Ala 
                85                  90                  95      


Ser Val Ala Lys His Ala Ser Pro Glu Glu Tyr Arg Tyr Ala Thr Gly 
            100                 105                 110         


Phe Glu Ser Leu Leu Gly Phe Leu Tyr Leu Lys Lys Asp Tyr Asp Arg 
        115                 120                 125             


Leu Met Asp Ile Leu Arg Met Ala Val Ser Gln Asn 
    130                 135                 140 


<210>  23
<211>  422
<212>  DNA
<213>  artificial

<220>
<223>  NA sequence of chimeric protein

<400>  23
atggtttggg aattttttga caaaattaca ggtgagttta attacaaacc ggatgaagta       60

agccaactgt cgcctttagt gcttgcatac ataggtgacg ccgtgtatga ggttttcatc      120

cgtacaatgc ttgtgtccgg aggaaacgta ccggtacatg ttctgaatgc agaaaaagtt      180

aaatatgtca aagcaaaggc acagtcggat attgtccaca ggataatgcc tttgctgacg      240

gaggaggagc ttaatattgt ccgcagggga aggaacgcgt caaaagcaag cgttgcaaaa      300

catgcaagtc cggaagaata caggtatgct accggttttg agtctttgtt gggttttctt      360

tatttgaaaa aagattatga ccgattgatg gatatattgc gaatggctgt ttcacagaat      420

ta                                                                     422


<210>  24
<211>  141
<212>  PRT
<213>  artificial

<220>
<223>  AA sequence of chimeric protein Bs(FpH)

<400>  24

Met Val Glu Phe Asp Thr Ile Lys Asp Ser Lys Gln Leu Asn Gly Leu 
1               5                   10                  15      


Ala Leu Ala Tyr Ile Gly Asp Ala Ile Phe Glu Val Tyr Val Arg His 
            20                  25                  30          


His Leu Leu Lys Gln Gly Phe Thr Lys Pro Asn Asp Leu Asn Ala Glu 
        35                  40                  45              


Lys Tyr Val Ser Ala Lys Ser Gln Ala Glu Ile Leu Phe Phe Leu Gln 
    50                  55                  60                  


Asn Gln Ser Phe Phe Thr Glu Glu Glu Glu Ala Val Leu Lys Arg Gly 
65                  70                  75                  80  


Arg Asn Ala Lys Ser Gly Thr Thr Pro Lys Asn Thr Asp Val Gln Thr 
                85                  90                  95      


Tyr Arg Tyr Ser Thr Ala Phe Glu Ala Leu Leu Gly Tyr Leu Phe Leu 
            100                 105                 110         


Glu Lys Lys Glu Glu Arg Leu Ser Gln Leu Val Ala Glu Ala Ile Gln 
        115                 120                 125             


Phe Gly Thr Ser Gly Arg Lys Thr Asn Glu Ser Ala Thr 
    130                 135                 140     


<210>  25
<211>  426
<212>  DNA
<213>  artificial

<220>
<223>  NA sequence of chimeric protein Bs(FpH)

<400>  25
atggttgaat ttgatacgat aaaagattct aagcagctta acggtcttgc gcttgcttat       60

ataggtgatg ccatttttga agtgtatgtc aggcatcacc tgcttaagca gggctttacc      120

aaaccaaatg atctgaatgc agaaaaatat gtttcagcaa agtcacaggc tgagatccta      180

ttttttctgc agaatcaatc attttttacg gaagaagagg aagcggtgct gaaaagaggc      240

agaaatgcca agtcagggac aacacctaaa aatacagatg ttcagacgta ccgctacagt      300

acagcatttg aagcgcttct gggctacctt tttctagaga aaaaagagga acgacttagt      360

cagctcgtag ccgaagctat acaattcggg acgtcaggga ggaaaacaaa tgagtcagca      420

acataa                                                                 426


<210>  26
<211>  143
<212>  PRT
<213>  artificial

<220>
<223>  AA sequence of chimeric protein Bs(FpL)

<400>  26

Met Val Glu Phe Asp Thr Ile Lys Asp Ser Lys Gln Leu Asn Gly Leu 
1               5                   10                  15      


Ala Leu Ala Tyr Ile Gly Asp Ala Ile Phe Glu Val Tyr Val Arg His 
            20                  25                  30          


His Leu Leu Lys Gln Gly Phe Thr Lys Pro Asn Asp Leu His Lys Lys 
        35                  40                  45              


Ser Ser Arg Ile Val Ser Ala Lys Ser Gln Ala Glu Ile Leu Phe Phe 
    50                  55                  60                  


Leu Gln Asn Gln Ser Phe Phe Thr Glu Glu Glu Glu Ala Val Leu Lys 
65                  70                  75                  80  


Arg Gly Arg Asn Ala Ser Lys Ala Ser Val Ala Lys His Ala Ser Pro 
                85                  90                  95      


Glu Glu Tyr Arg Tyr Ser Thr Ala Phe Glu Ala Leu Leu Gly Tyr Leu 
            100                 105                 110         


Phe Leu Glu Lys Lys Glu Glu Arg Leu Ser Gln Leu Val Ala Glu Ala 
        115                 120                 125             


Ile Gln Phe Gly Thr Ser Gly Arg Lys Thr Asn Glu Ser Ala Thr 
    130                 135                 140             


<210>  27
<211>  432
<212>  DNA
<213>  artificial

<220>
<223>  NA sequence of chimeric protein Bs(FpL)

<400>  27
atggttgaat ttgatacgat aaaagattct aagcagctta acggtcttgc gcttgcttat       60

ataggtgatg ccatttttga agtgtatgtc aggcatcacc tgcttaagca gggctttacc      120

aaaccaaatg atcttcataa gaaatcaagc cggattgttt cagcaaagtc acaggctgag      180

atcctatttt ttctgcagaa tcaatcattt tttacggaag aagaggaagc ggtgctgaaa      240

agaggcagaa acgcgtcaaa agcaagcgtt gcaaaacatg caagtccgga agaataccgc      300

tacagtacag catttgaagc gcttctgggc tacctttttc tagagaaaaa agaggaacga      360

cttagtcagc tcgtagccga agctatacaa ttcgggacgt cagggaggaa aacaaatgag      420

tcagcaacat aa                                                          432


<210>  28
<211>  131
<212>  PRT
<213>  artificial

<220>
<223>  AA sequence of chimeric protein Se(FpH)

<400>  28

Met Val Ala Lys His Met Asn Val Lys Leu Leu Asn Pro Leu Thr Leu 
1               5                   10                  15      


Ala Tyr Met Gly Asp Ala Val Leu Asp Gln His Val Arg Glu Tyr Ile 
            20                  25                  30          


Val Leu Lys Leu Gln Ser Lys Pro His Arg Leu Asn Ala Glu Lys Tyr 
        35                  40                  45              


Val Ser Ala Lys Ser Gln Ala Lys Thr Leu Glu Tyr Leu Leu Asp Ile 
    50                  55                  60                  


Asp Trp Phe Thr Glu Glu Glu Leu Ser Val Leu Lys Arg Gly Arg Asn 
65                  70                  75                  80  


Ala Lys Ser Tyr Thr Lys Ala Lys Asn Thr Asp Ile Gln Thr Tyr Arg 
                85                  90                  95      


Lys Ser Ser Ala Leu Glu Ala Val Ile Gly Phe Leu Tyr Leu Asp His 
            100                 105                 110         


Gln Ser Glu Arg Leu Glu Asn Leu Leu Glu Thr Ile Val Arg Ile Val 
        115                 120                 125             


Asp Glu Arg 
    130     


<210>  29
<211>  394
<212>  DNA
<213>  artificial

<220>
<223>  NA sequence of chimeric protein Se(FpH)

<400>  29
atggtggcta aacatatgaa cgtaaaactt cttaatcctt taacattggc atatatgggt       60

gatgcagtac ttgatcaaca tgtgcgtgaa tatatcgtgc taaaattaca aagtaaacct      120

catcgtctga atgcagaaaa atacgtttca gcgaaaagtc aagctaagac tttagagtat      180

ttgttagata ttgactggtt tacagaggaa gagctaagtg ttttaaaacg aggacgtaac      240

gctaaaagtt atacaaaagc taaaaatact gacattcaaa cttatcgtaa aagttcagcg      300

ttagaagctg ttatcggatt tttatattta gaccatcaat cagaacgatt agaaaactta      360

ttagaaacaa ttgttaggat agtggatgaa ataa                                  394


<210>  30
<211>  27
<212>  DNA
<213>  artificial

<220>
<223>  Starter FckminiIII

<400>  30
cctccatggt cagtccttta gtatatg                                           27


<210>  31
<211>  30
<212>  DNA
<213>  artificial

<220>
<223>  Starter RckminiIII

<400>  31
cctctcgagt tattgacagc tattcttggc                                        30


<210>  32
<211>  28
<212>  DNA
<213>  artificial

<220>
<223>  Starter FcrminiIII

<400>  32
ggaccatggg ccctgaactg attaatgc                                          28


<210>  33
<211>  30
<212>  DNA
<213>  artificial

<220>
<223>  Starter RcrminiIII

<400>  33
ggcctcgagt tatttgttgt tgatgtactg                                        30


<210>  34
<211>  28
<212>  DNA
<213>  artificial

<220>
<223>  Starter FctminiIII

<400>  34
caggcatatg gtttgggaat tttttgac                                          28


<210>  35
<211>  28
<212>  DNA
<213>  artificial

<220>
<223>  Starter RctminiIII

<400>  35
gacctcgagt caattctgtg aaacagcc                                          28


<210>  36
<211>  27
<212>  DNA
<213>  Artificial

<220>
<223>  Starter FfpminiIII

<400>  36
ggaccatgga cgaaagcgaa aaaattg                                           27


<210>  37
<211>  31
<212>  DNA
<213>  Artificial

<220>
<223>  Starter RfpminiIII

<400>  37
gcgctcgagt tatttctgat caggatcaaa c                                      31


<210>  38
<211>  30
<212>  DNA
<213>  artificial

<220>
<223>  Starter FfnminiIII

<400>  38
ccgcatatgg acaatgtaga tttttcaaag                                        30


<210>  39
<211>  54
<212>  DNA
<213>  artificial

<220>
<223>  Starter RfnminiIII

<400>  39
gtgctcgagt catcattctc cctttataac tatatttata atttttttta tttc             54


<210>  40
<211>  31
<212>  DNA
<213>  artificial

<220>
<223>  Starter FseminiIII

<400>  40
tagacatatg gcagtggcta aacatatgaa c                                      31


<210>  41
<211>  25
<212>  DNA
<213>  artificial

<220>
<223>  Starter RseminiIII

<400>  41
atctcgagct acctttcatc cacta                                             25


<210>  42
<211>  29
<212>  DNA
<213>  artificial

<220>
<223>  Starter FtmminiIII

<400>  42
gcttcatatg gaaaaactct tcagattcg                                         29


<210>  43
<211>  27
<212>  DNA
<213>  artificial

<220>
<223>  Starter RtmminiIII

<400>  43
cttctcgagt tattcctgag cgcttcc                                           27


<210>  44
<211>  32
<212>  DNA
<213>  artificial

<220>
<223>  Starter FttminiIII

<400>  44
cgcacatatg gaaaaggata agatgattct tg                                     32


<210>  45
<211>  32
<212>  DNA
<213>  artificial

<220>
<223>  Starter RttminiIII

<400>  45
gctctcgagt cattcttccg tgtattccat ag                                     32


<210>  46
<211>  36
<212>  DNA
<213>  artificial

<220>
<223>  Starter UniShPreA

<400>  46
agatcggaag agcgtcgtgt agggaaagag tgtaga                                 36


<210>  47
<211>  23
<212>  DNA
<213>  artificial

<220>
<223>  Starter UniShRT

<400>  47
tctacactct ttccctacac gac                                               23


<210>  48
<211>  33
<212>  DNA
<213>  artificial

<220>
<223>  Starter PreA3Univ

<400>  48
gatcggaaga gcacacgtct gaactccagt cac                                    33


<210>  49
<211>  34
<212>  DNA
<213>  artificial

<220>
<223>  Starter 910fT7

<400>  49
taatacgact cactataggg ctgctcgcgc gttg                                   34


<210>  50
<211>  31
<212>  DNA
<213>  artificial

<220>
<223>  Starter 910rP6

<400>  50
ggaaaaaaat cagacacaac tgacgcgatc g                                      31


<210>  51
<211>  41
<212>  DNA
<213>  artificial

<220>
<223>  Starter 949fT7

<400>  51
taatacgact cactataggg cctctctctc tggccacgat c                           41


<210>  52
<211>  31
<212>  DNA
<213>  artificial

<220>
<223>  Starter 949rP6

<400>  52
ggaaaaaaat gccctgtaca gcaggcataa g                                      31


<210>  53
<211>  39
<212>  DNA
<213>  artificial

<220>
<223>  Starter 2021fT7

<400>  53
taatacgact cactataggg ctcctatcat ggccgttgc                              39


<210>  54
<211>  30
<212>  DNA
<213>  artificial

<220>
<223>  Starter 2021rP6

<400>  54
ggaaaaaaac ttcgagatca gggttggacg                                        30


<210>  55
<211>  42
<212>  DNA
<213>  artificial

<220>
<223>  Starter 3292fT7

<400>  55
taatacgact cactataggg taccgcgatc aacactgtcg tc                          42


<210>  56
<211>  29
<212>  DNA
<213>  artificial

<220>
<223>  Starter 3292rP6

<400>  56
ggaaaaaaac gaatcaggac gtctggacg                                         29


<210>  57
<211>  41
<212>  DNA
<213>  artificial

<220>
<223>  Starter 4486fT7

<400>  57
taatacgact cactataggg ctgtctcccc tcggtttcat c                           41


<210>  58
<211>  28
<212>  DNA
<213>  artificial

<220>
<223>  Starter 4486rP6

<400>  58
ggaaaaaaat cgacagacga cagcgctg                                          28


<210>  59
<211>  42
<212>  DNA
<213>  artificial

<220>
<223>  Starter 4754fT7

<400>  59
taatacgact cactataggg ctcatcgcct cgatgaacca ag                          42


<210>  60
<211>  29
<212>  DNA
<213>  artificial

<220>
<223>  Starter 4754rP6

<400>  60
ggaaaaaaac tactgctttc gagcggtcg                                         29


<210>  61
<211>  21
<212>  DNA
<213>  artificial

<220>
<223>  Starter WSSWf

<400>  61
sswctctctc tggccacgat c                                                 21


<210>  62
<211>  16
<212>  DNA
<213>  artificial

<220>
<223>  Starter WSSWr

<400>  62
wttccctccc agcacg                                                       16


<210>  63
<211>  21
<212>  DNA
<213>  artificial

<220>
<223>  Starter ANNTf


<220>
<221>  misc_feature
<222>  (1)..(2)
<223>  n is a, c, g, or t

<400>  63
nntctctctc tggccacgat c                                                 21


<210>  64
<211>  16
<212>  DNA
<213>  artificial

<220>
<223>  Starter ANNTr

<400>  64
tttccctccc agcacg                                                       16


<210>  65
<211>  21
<212>  DNA
<213>  artificial

<220>
<223>  Starter NCCNf


<220>
<221>  misc_feature
<222>  (3)..(3)
<223>  n is a, c, g, or t

<400>  65
ccnctctctc tggccacgat c                                                 21


<210>  66
<211>  16
<212>  DNA
<213>  artificial

<220>
<223>  Starter NCCNr


<220>
<221>  misc_feature
<222>  (1)..(1)
<223>  n is a, c, g, or t

<400>  66
nttccctccc agcacg                                                       16


<210>  67
<211>  24
<212>  DNA
<213>  artificial

<220>
<223>  Starter 3T-r

<400>  67
tttacctccc agcacgaccg cgac                                              24


<210>  68
<211>  26
<212>  DNA
<213>  artificial

<220>
<223>  Starter 3T-f

<400>  68
cctctctctc tggccacgat cgcgtc                                            26


<210>  69
<211>  21
<212>  DNA
<213>  artificial

<220>
<223>  Starter 4C-r

<400>  69
gccctcccag cacgaccgcg a                                                 21


<210>  70
<211>  22
<212>  DNA
<213>  artificial

<220>
<223>  Starter 4G-r

<400>  70
cccctcccag cacgaccgcg ac                                                22


<210>  71
<211>  19
<212>  DNA
<213>  artificial

<220>
<223>  Starter 4T-r

<400>  71
accctcccag cacgaccgc                                                    19


<210>  72
<211>  28
<212>  DNA
<213>  artificial

<220>
<223>  Starter 4-f

<400>  72
aacctctctc tctggccacg atcgcgtc                                          28


<210>  73
<211>  28
<212>  DNA
<213>  artificial

<220>
<223>  Starter 11C-r

<400>  73
cctccctctc tggccacgat cgcgtcag                                          28


<210>  74
<211>  28
<212>  DNA
<213>  artificial

<220>
<223>  Starter 11G-r

<400>  74
cctcgctctc tggccacgat cgcgtcag                                          28


<210>  75
<211>  28
<212>  DNA
<213>  artificial

<220>
<223>  Starter 12A-r

<400>  75
cctctatctc tggccacgat cgcgtcag                                          28


<210>  76
<211>  24
<212>  DNA
<213>  artificial

<220>
<223>  Starter 11/12-f

<400>  76
tttccctccc agcacgaccg cgac                                              24


<210>  77
<211>  22
<212>  DNA
<213>  artificial

<220>
<223>  Starer CtR1Up

<400>  77
gcttcataag cgctccattg ct                                                22


<210>  78
<211>  22
<212>  DNA
<213>  artificial

<220>
<223>  Starter CtR1Dw

<400>  78
agcaatggag cgcttatgaa gc                                                22


<210>  79
<211>  32
<212>  DNA
<213>  artificial

<220>
<223>  Starter CtR2Up

<400>  79
caatgccaaa tcggccacgg ttccgaaaaa tg                                     32


<210>  80
<211>  27
<212>  DNA
<213>  artificial

<220>
<223>  Starter CtR2Dw

<400>  80
atccgtaata tccgcatttt tcggaac                                           27


<210>  81
<211>  17
<212>  DNA
<213>  artificial

<220>
<223>  Starter FpR1Up

<400>  81
atgcagaaaa agttaaa                                                      17


<210>  82
<211>  17
<212>  DNA
<213>  artificial

<220>
<223>  Starter FpR1Dw

<400>  82
tttaactttt tctgcat                                                      17


<210>  83
<211>  27
<212>  DNA
<213>  artificial

<220>
<223>  Starter FpR2Up

<400>  83
cgtcaaaagc aagcgttgca aaacatg                                           27


<210>  84
<211>  27
<212>  DNA
<213>  artificial

<220>
<223>  Starter FpR2Dw

<400>  84
ttcttccgga cttgcatgtt ttgcaac                                           27


<210>  85
<211>  19
<212>  DNA
<213>  artificial

<220>
<223>  Starter CpR1f

<400>  85
tatgtcaaag caaaggcac                                                    19


<210>  86
<211>  20
<212>  DNA
<213>  artificial

<220>
<223>  Starter CpR1r

<400>  86
tcagaacatg taccggtacg                                                   20


<210>  87
<211>  30
<212>  DNA
<213>  artificial

<220>
<223>  Starter CpR2f

<400>  87
tacaggtatg ctaccggttt tgagtctttg                                        30


<210>  88
<211>  19
<212>  DNA
<213>  artificial

<220>
<223>  Starter

<400>  88
cgttccttcc cctgcggac                                                    19


<210>  89
<211>  16
<212>  DNA
<213>  artificial

<220>
<223>  Starter FpR1f

<400>  89
tacgttagcg ccaaag                                                       16


<210>  90
<211>  16
<212>  DNA
<213>  artificial

<220>
<223>  Starer FpR1r

<400>  90
ttacctgcgc tcagac                                                       16


<210>  91
<211>  22
<212>  DNA
<213>  artificial

<220>
<223>  Starter FpR2f

<400>  91
tatcgtgcaa gcaccggttt tg                                                22


<210>  92
<211>  26
<212>  DNA
<213>  artificial

<220>
<223>  Starter FpR2r

<400>  92
cgaccacgtt taaaaactgc cagttc                                            26


<210>  93
<211>  20
<212>  DNA
<213>  artificial

<220>
<223>  Starter BsR1f

<400>  93
tatgtttcag caaagtcaca                                                   20


<210>  94
<211>  23
<212>  DNA
<213>  artificial

<220>
<223>  Starter BsR1r

<400>  94
tcagatcatt tggtttggta aag                                               23


<210>  95
<211>  17
<212>  DNA
<213>  artificial

<220>
<223>  Starter BsR2f

<400>  95
taccgctaca gtacagc                                                      17


<210>  96
<211>  20
<212>  DNA
<213>  artificial

<220>
<223>  Starter BsR2r

<400>  96
cgtttctgcc tcttttcagc                                                   20


<210>  97
<211>  19
<212>  DNA
<213>  artificial

<220>
<223>  Starter SeR1f

<400>  97
tacgtttcag cgaaaagtc                                                    19


<210>  98
<211>  31
<212>  DNA
<213>  artificial

<220>
<223>  Starter SeR1rf

<400>  98
tcagacgatg aggtttactt tgtaatttta g                                      31


<210>  99
<211>  22
<212>  DNA
<213>  artificial

<220>
<223>  Starter SeR2f

<400>  99
tatcgtaaaa gttcagcgtt ag                                                22


<210>  100
<211>  22
<212>  DNA
<213>  artificial

<220>
<223>  Starter SeR2r

<400>  100
cgttacgtcc tcgttttaaa ac                                                22


<210>  101
<211>  18
<212>  DNA
<213>  artificial

<220>
<223>  Starter ET-long

<400>  101
gtccggcgta gaggatcg                                                     18


<210>  102
<211>  16
<212>  DNA
<213>  artificial

<220>
<223>  Starter ET-reverse

<400>  102
tcccattcgc caatcc                                                       16


<210>  103
<211>  14
<212>  RNA
<213>  phi6 bacteriophage

<400>  103
gggaaaccuc ucuc                                                         14


