                               SEQUENCE LISTING



<110> GENIA TECHNOLOGIES, INC.

 

<120> NANOPORE SEQUENCING COMPLEXES



<130> P33378-WO



<140>

<141>



<150> 62/281,719

<151> 2016-01-21



<160> 7     



<170> PatentIn version 3.5



<210> 1

<211> 306

<212> PRT

<213> Artificial Sequence



<220>

<221> source

<223> /note="Description of Artificial Sequence: Synthetic

      polypeptide"



<400> 1

Met Ala Asp Ser Asp Ile Asn Ile Lys Thr Gly Thr Ile Asp Ile Gly 

1               5                   10                  15      





Ser Asn Thr Ile Val Lys Thr Gly Asp Leu Val Thr Tyr Asp Lys Glu 

            20                  25                  30          





Asn Gly Met His Lys Lys Val Phe Tyr Ser Phe Ile Asp Asp Lys Asn 

        35                  40                  45              





His Asn Lys Lys Leu Leu Val Ile Arg Thr Lys Gly Thr Ile Ala Gly 

    50                  55                  60                  





Gln Tyr Arg Val Tyr Ser Glu Glu Gly Ala Asn Lys Ser Gly Leu Ala 

65                  70                  75                  80  





Trp Pro Ser Ala Phe Lys Val Gln Leu Gln Leu Pro Asp Asn Glu Val 

                85                  90                  95      





Ala Gln Ile Ser Asp Tyr Tyr Pro Arg Asn Ser Ile Asp Thr Lys Glu 

            100                 105                 110         





Tyr Met Ser Thr Leu Thr Tyr Gly Phe Asn Gly Asn Val Thr Gly Asp 

        115                 120                 125             





Asp Thr Gly Lys Ile Gly Gly Leu Ile Gly Ala Asn Val Ser Ile Gly 

    130                 135                 140                 





Ala Thr Leu Lys Tyr Val Gln Pro Asp Phe Lys Thr Ile Leu Glu Ser 

145                 150                 155                 160 





Pro Thr Asp Lys Lys Val Gly Trp Lys Val Ile Phe Asn Asn Met Val 

                165                 170                 175     





Asn Gln Asn Trp Gly Pro Tyr Asp Arg Asp Ser Trp Asn Pro Val Tyr 

            180                 185                 190         





Gly Asn Gln Leu Phe Met Lys Thr Arg Asn Gly Ser Met Lys Ala Ala 

        195                 200                 205             





Asp Asn Phe Leu Asp Pro Asn Lys Ala Ser Ser Leu Leu Ser Ser Gly 

    210                 215                 220                 





Phe Ser Pro Asp Phe Ala Thr Val Ile Thr Met Asp Arg Lys Ala Ser 

225                 230                 235                 240 





Lys Gln Gln Thr Asn Ile Asp Val Ile Tyr Glu Arg Val Arg Asp Asp 

                245                 250                 255     





Tyr Gln Leu His Trp Thr Ser Thr Asn Trp Lys Gly Thr Asn Thr Lys 

            260                 265                 270         





Asp Lys Trp Thr Asp Arg Ser Ser Glu Arg Tyr Lys Ile Asp Trp Glu 

        275                 280                 285             





Lys Glu Glu Met Thr Asn Gly Leu Ser Ala Trp Ser His Pro Gln Phe 

    290                 295                 300                 





Glu Lys 

305     





<210> 2

<211> 325

<212> PRT

<213> Artificial Sequence



<220>

<221> source

<223> /note="Description of Artificial Sequence: Synthetic

      polypeptide"



<400> 2

Met Ala Asp Ser Asp Ile Asn Ile Lys Thr Gly Thr Ile Asp Ile Gly 

1               5                   10                  15      





Ser Asn Thr Ile Val Lys Thr Gly Asp Leu Val Thr Tyr Asp Lys Glu 

            20                  25                  30          





Asn Gly Met His Lys Lys Val Phe Tyr Ser Phe Ile Asp Asp Lys Asn 

        35                  40                  45              





His Asn Lys Lys Leu Leu Val Ile Arg Thr Lys Gly Thr Ile Ala Gly 

    50                  55                  60                  





Gln Tyr Arg Val Tyr Ser Glu Glu Gly Ala Asn Lys Ser Gly Leu Ala 

65                  70                  75                  80  





Trp Pro Ser Ala Phe Lys Val Gln Leu Gln Leu Pro Asp Asn Glu Val 

                85                  90                  95      





Ala Gln Ile Ser Asp Tyr Tyr Pro Arg Asn Ser Ile Asp Thr Lys Glu 

            100                 105                 110         





Tyr Met Ser Thr Leu Thr Tyr Gly Phe Asn Gly Asn Val Thr Gly Asp 

        115                 120                 125             





Asp Thr Gly Lys Ile Gly Gly Leu Ile Gly Ala Asn Val Ser Ile Gly 

    130                 135                 140                 





His Thr Leu Lys Tyr Val Gln Pro Asp Phe Lys Thr Ile Leu Glu Ser 

145                 150                 155                 160 





Pro Thr Asp Lys Lys Val Gly Trp Lys Val Ile Phe Asn Asn Met Val 

                165                 170                 175     





Asn Gln Asn Trp Gly Pro Tyr Asp Arg Asp Ser Trp Asn Pro Val Tyr 

            180                 185                 190         





Gly Asn Gln Leu Phe Met Lys Thr Arg Asn Gly Ser Met Lys Ala Ala 

        195                 200                 205             





Asp Asn Phe Leu Asp Pro Asn Lys Ala Ser Ser Leu Leu Ser Ser Gly 

    210                 215                 220                 





Phe Ser Pro Asp Phe Ala Thr Val Ile Thr Met Asp Arg Lys Ala Ser 

225                 230                 235                 240 





Lys Gln Gln Thr Asn Ile Asp Val Ile Tyr Glu Arg Val Arg Asp Asp 

                245                 250                 255     





Tyr Gln Leu His Trp Thr Ser Thr Asn Trp Lys Gly Thr Asn Thr Lys 

            260                 265                 270         





Asp Lys Trp Thr Asp Arg Ser Ser Glu Arg Tyr Lys Ile Asp Trp Glu 

        275                 280                 285             





Lys Glu Glu Met Thr Asn Gly Gly Ser Ser Gly Gly Ser Ser Gly Gly 

    290                 295                 300                 





Ala His Ile Val Met Val Asp Ala Tyr Lys Pro Thr Lys Lys Gly His 

305                 310                 315                 320 





His His His His His 

                325 





<210> 3

<211> 867

<212> PRT

<213> Artificial Sequence



<220>

<221> source

<223> /note="Description of Artificial Sequence: Synthetic

      polypeptide"



<400> 3

Met His His His His His His His His Ser Gly Asp Tyr Asp Ile Pro 

1               5                   10                  15      





Thr Thr Glu Asn Leu Tyr Phe Gln Gly Ala Met Val Asp Thr Leu Ser 

            20                  25                  30          





Gly Leu Ser Ser Glu Gln Gly Gln Ser Gly Asp Met Thr Ile Glu Glu 

        35                  40                  45              





Asp Ser Ala Thr His Ile Lys Phe Ser Lys Arg Asp Glu Asp Gly Lys 

    50                  55                  60                  





Glu Leu Ala Gly Ala Thr Met Glu Leu Arg Asp Ser Ser Gly Lys Thr 

65                  70                  75                  80  





Ile Ser Thr Trp Ile Ser Asp Gly Gln Val Lys Asp Phe Tyr Leu Tyr 

                85                  90                  95      





Pro Gly Lys Tyr Thr Phe Val Glu Thr Ala Ala Pro Asp Gly Tyr Glu 

            100                 105                 110         





Val Ala Thr Ala Ile Thr Phe Thr Val Asn Glu Gln Gly Gln Val Thr 

        115                 120                 125             





Val Asn Gly Lys Ala Thr Lys Gly Asp Ala His Ile Gly Gly Ser Asp 

    130                 135                 140                 





Lys His Thr Gln Tyr Val Lys Glu His Ser Phe Asn Tyr Asp Glu Tyr 

145                 150                 155                 160 





Lys Lys Ala Asn Phe Asp Lys Ile Glu Cys Leu Ile Phe Asp Thr Glu 

                165                 170                 175     





Ser Cys Thr Asn Tyr Glu Asn Asp Asn Thr Gly Ala Arg Val Tyr Gly 

            180                 185                 190         





Trp Gly Leu Gly Val Thr Arg Asn His Asn Met Ile Tyr Gly Gln Asn 

        195                 200                 205             





Leu Asn Gln Phe Trp Glu Val Cys Gln Asn Ile Phe Asn Asp Trp Tyr 

    210                 215                 220                 





His Asp Asn Lys His Thr Ile Lys Ile Thr Lys Thr Lys Lys Gly Phe 

225                 230                 235                 240 





Pro Lys Arg Lys Tyr Ile Lys Phe Pro Ile Ala Val His Asn Leu Gly 

                245                 250                 255     





Trp Asp Val Glu Phe Leu Lys Tyr Ser Leu Val Glu Asn Gly Phe Asn 

            260                 265                 270         





Tyr Asp Lys Gly Leu Leu Lys Thr Val Phe Ser Lys Gly Ala Pro Tyr 

        275                 280                 285             





Gln Thr Val Thr Asp Val Glu Glu Pro Lys Thr Phe His Ile Val Gln 

    290                 295                 300                 





Asn Asn Asn Ile Val Tyr Gly Cys Asn Val Tyr Met Asp Lys Phe Phe 

305                 310                 315                 320 





Glu Val Glu Asn Lys Asp Gly Ser Thr Thr Glu Ile Gly Leu Cys Leu 

                325                 330                 335     





Asp Phe Phe Asp Ser Tyr Lys Ile Ile Thr Cys Ala Glu Ser Gln Phe 

            340                 345                 350         





His Asn Tyr Val His Asp Val Asp Pro Met Phe Tyr Lys Met Gly Glu 

        355                 360                 365             





Glu Tyr Asp Tyr Asp Thr Trp Arg Ser Pro Thr His Lys Gln Thr Ile 

    370                 375                 380                 





Leu Glu Leu Arg Tyr Gln Tyr Asn Asp Ile Tyr Met Leu Arg Glu Val 

385                 390                 395                 400 





Ile Glu Gln Phe Tyr Ile Asp Gly Leu Cys Gly Gly Glu Leu Pro Leu 

                405                 410                 415     





Thr Gly Met Arg Thr Ala Ser Ser Ile Ala Phe Asn Val Leu Lys Lys 

            420                 425                 430         





Met Thr Phe Gly Glu Glu Lys Thr Glu Glu Gly Tyr Ile Asn Tyr Phe 

        435                 440                 445             





Glu Leu Asp Lys Lys Thr Lys Phe Glu Phe Leu Arg Lys Arg Ile Glu 

    450                 455                 460                 





Met Glu Ser Tyr Thr Gly Gly Tyr His Ala Asn His Lys Ala Val Gly 

465                 470                 475                 480 





Lys Thr Ile Asn Lys Ile Gly Cys Ser Leu Asp Ile Asn Ser Ala Tyr 

                485                 490                 495     





Pro Ser Gln Met Ala Tyr Lys Val Phe Pro Tyr Gly Lys Pro Val Arg 

            500                 505                 510         





Lys Thr Trp Gly Arg Lys Pro Lys Thr Glu Lys Asn Glu Val Tyr Leu 

        515                 520                 525             





Ile Glu Val Gly Phe Asp Phe Val Glu Pro Lys His Glu Glu Tyr Ala 

    530                 535                 540                 





Leu Asp Ile Phe Lys Ile Gly Ala Val Asn Ser Lys Ala Leu Ser Pro 

545                 550                 555                 560 





Ile Thr Gly Ala Val Ser Gly Gln Glu Tyr Phe Cys Thr Asn Ile Lys 

                565                 570                 575     





Asp Gly Lys Ala Ile Pro Val Tyr Lys Glu Leu Lys Asp Thr Lys Leu 

            580                 585                 590         





Thr Ile Asn Tyr Asn Trp Leu Thr Ser Val Glu Tyr Glu Phe Trp Ile 

        595                 600                 605             





Lys His Phe Asn Phe Gly Val Phe Lys Lys Asp Glu Tyr Asp Cys Phe 

    610                 615                 620                 





Glu Val Asp Asn Leu Glu Phe Thr Gly Leu Lys Ile Gly Ser Ile Leu 

625                 630                 635                 640 





Tyr Tyr Lys Ala Glu Lys Gly Lys Phe Lys Pro Tyr Val Asp His Phe 

                645                 650                 655     





Thr Lys Met Lys Val Glu Leu Lys Lys Leu Gly Asn Lys Pro Leu Thr 

            660                 665                 670         





Asn Gln Ala Lys Leu Ile Leu Asn Gly Ala Tyr Gly Lys Phe Gly Thr 

        675                 680                 685             





Lys Gln Asn Lys Glu Glu Lys Asp Leu Ile Met Asp Lys Asn Gly Leu 

    690                 695                 700                 





Leu Thr Phe Thr Gly Ser Val Thr Glu Tyr Glu Gly Lys Glu Phe Tyr 

705                 710                 715                 720 





Arg Pro Tyr Ala Ser Phe Val Thr Ala Tyr Gly Arg Leu Gln Leu Trp 

                725                 730                 735     





Asn Ala Ile Ile Tyr Ala Val Gly Val Glu Asn Phe Leu Tyr Cys Asp 

            740                 745                 750         





Thr Asp Ser Ile Tyr Cys Asn Arg Glu Val Asn Ser Leu Ile Glu Asp 

        755                 760                 765             





Met Asn Ala Ile Gly Glu Thr Ile Asp Lys Thr Gln Leu Gly Lys Trp 

    770                 775                 780                 





Asp Val Glu His Val Phe Asp Lys Phe Lys Val Leu Gly Gln Lys Lys 

785                 790                 795                 800 





Tyr Met Tyr His Asp Cys Lys Glu Asp Lys Thr Asp Leu Lys Cys Cys 

                805                 810                 815     





Gly Leu Pro Ser Asp Ala Arg Lys Ile Ile Ile Gly Gln Gly Phe Asp 

            820                 825                 830         





Glu Phe Tyr Leu Gly Lys Asn Val Glu Gly Lys Lys Gln Arg Lys Lys 

        835                 840                 845             





Val Ile Gly Gly Cys Leu Leu Leu Asp Thr Leu Phe Thr Ile Lys Lys 

    850                 855                 860                 





Ile Met Phe 

865         





<210> 4

<211> 727

<212> PRT

<213> Clostridium phage phiCPV4



<400> 4

Met Asp Lys His Thr Gln Tyr Val Lys Glu His Ser Phe Asn Tyr Asp 

1               5                   10                  15      





Glu Tyr Lys Lys Ala Asn Phe Asp Lys Ile Glu Cys Leu Ile Phe Asp 

            20                  25                  30          





Thr Glu Ser Cys Thr Asn Tyr Glu Asn Asp Asn Thr Gly Ala Arg Val 

        35                  40                  45              





Tyr Gly Trp Gly Leu Gly Val Thr Arg Asn His Asn Met Ile Tyr Gly 

    50                  55                  60                  





Gln Asn Leu Asn Gln Phe Trp Glu Val Cys Gln Asn Ile Phe Asn Asp 

65                  70                  75                  80  





Trp Tyr His Asp Asn Lys His Thr Ile Lys Ile Thr Lys Thr Lys Lys 

                85                  90                  95      





Gly Phe Pro Lys Arg Lys Tyr Ile Lys Phe Pro Ile Ala Val His Asn 

            100                 105                 110         





Leu Gly Trp Asp Val Glu Phe Leu Lys Tyr Ser Leu Val Glu Asn Gly 

        115                 120                 125             





Phe Asn Tyr Asp Lys Gly Leu Leu Lys Thr Val Phe Ser Lys Gly Ala 

    130                 135                 140                 





Pro Tyr Gln Thr Val Thr Asp Val Glu Glu Pro Lys Thr Phe His Ile 

145                 150                 155                 160 





Val Gln Asn Asn Asn Ile Val Tyr Gly Cys Asn Val Tyr Met Asp Lys 

                165                 170                 175     





Phe Phe Glu Val Glu Asn Lys Asp Gly Ser Thr Thr Glu Ile Gly Leu 

            180                 185                 190         





Cys Leu Asp Phe Phe Asp Ser Tyr Lys Ile Ile Thr Cys Ala Glu Ser 

        195                 200                 205             





Gln Phe His Asn Tyr Val His Asp Val Asp Pro Met Phe Tyr Lys Met 

    210                 215                 220                 





Gly Glu Glu Tyr Asp Tyr Asp Thr Trp Arg Ser Pro Thr His Lys Gln 

225                 230                 235                 240 





Thr Thr Leu Glu Leu Arg Tyr Gln Tyr Asn Asp Ile Tyr Met Leu Arg 

                245                 250                 255     





Glu Val Ile Glu Gln Phe Tyr Ile Asp Gly Leu Cys Gly Gly Glu Leu 

            260                 265                 270         





Pro Leu Thr Gly Met Arg Thr Ala Ser Ser Ile Ala Phe Asn Val Leu 

        275                 280                 285             





Lys Lys Met Thr Phe Gly Glu Glu Lys Thr Glu Glu Gly Tyr Ile Asn 

    290                 295                 300                 





Tyr Phe Glu Leu Asp Lys Lys Thr Lys Phe Glu Phe Leu Arg Lys Arg 

305                 310                 315                 320 





Ile Glu Met Glu Ser Tyr Thr Gly Gly Tyr Thr His Ala Asn His Lys 

                325                 330                 335     





Ala Val Gly Lys Thr Ile Asn Lys Ile Gly Cys Ser Leu Asp Ile Asn 

            340                 345                 350         





Ser Ser Tyr Pro Ser Gln Met Ala Tyr Lys Val Phe Pro Tyr Gly Lys 

        355                 360                 365             





Pro Val Arg Lys Thr Trp Gly Arg Lys Pro Lys Thr Glu Lys Asn Glu 

    370                 375                 380                 





Val Tyr Leu Ile Glu Val Gly Phe Asp Phe Val Glu Pro Lys His Glu 

385                 390                 395                 400 





Glu Tyr Ala Leu Asp Ile Phe Lys Ile Gly Ala Val Asn Ser Lys Ala 

                405                 410                 415     





Leu Ser Pro Ile Thr Gly Ala Val Ser Gly Gln Glu Tyr Phe Cys Thr 

            420                 425                 430         





Asn Ile Lys Asp Gly Lys Ala Ile Pro Val Tyr Lys Glu Leu Lys Asp 

        435                 440                 445             





Thr Lys Leu Thr Thr Asn Tyr Asn Val Val Leu Thr Ser Val Glu Tyr 

    450                 455                 460                 





Glu Phe Trp Ile Lys His Phe Asn Phe Gly Val Phe Lys Lys Asp Glu 

465                 470                 475                 480 





Tyr Asp Cys Phe Glu Val Asp Asn Leu Glu Phe Thr Gly Leu Lys Ile 

                485                 490                 495     





Gly Ser Ile Leu Tyr Tyr Lys Ala Glu Lys Gly Lys Phe Lys Pro Tyr 

            500                 505                 510         





Val Asp His Phe Thr Lys Met Lys Val Glu Asn Lys Lys Leu Gly Asn 

        515                 520                 525             





Lys Pro Leu Thr Asn Gln Ala Lys Leu Ile Leu Asn Gly Ala Tyr Gly 

    530                 535                 540                 





Lys Phe Gly Thr Lys Gln Asn Lys Glu Glu Lys Asp Leu Ile Met Asp 

545                 550                 555                 560 





Lys Asn Gly Leu Leu Thr Phe Thr Gly Ser Val Thr Glu Tyr Glu Gly 

                565                 570                 575     





Lys Glu Phe Tyr Arg Pro Tyr Ala Ser Phe Val Thr Ala Tyr Gly Arg 

            580                 585                 590         





Leu Gln Leu Trp Asn Ala Ile Ile Tyr Ala Val Gly Val Glu Asn Phe 

        595                 600                 605             





Leu Tyr Cys Asp Thr Asp Ser Ile Tyr Cys Asn Arg Glu Val Asn Ser 

    610                 615                 620                 





Leu Ile Glu Asp Met Asn Ala Ile Gly Glu Thr Ile Asp Lys Thr Ile 

625                 630                 635                 640 





Leu Gly Lys Trp Asp Val Glu His Val Phe Asp Lys Phe Lys Val Leu 

                645                 650                 655     





Gly Gln Lys Lys Tyr Met Tyr His Asp Cys Lys Glu Asp Lys Thr Asp 

            660                 665                 670         





Leu Lys Cys Cys Gly Leu Pro Ser Asp Ala Arg Lys Ile Ile Ile Gly 

        675                 680                 685             





Gln Gly Phe Asp Glu Phe Tyr Leu Gly Lys Asn Val Glu Gly Lys Lys 

    690                 695                 700                 





Gln Arg Lys Lys Val Ile Gly Gly Cys Leu Leu Leu Asp Thr Leu Phe 

705                 710                 715                 720 





Thr Ile Lys Lys Ile Met Phe 

                725         





<210> 5

<211> 293

<212> PRT

<213> Staphylococcus aureus



<400> 5

Ala Asp Ser Asp Ile Asn Ile Lys Thr Gly Thr Thr Asp Ile Gly Ser 

1               5                   10                  15      





Asn Thr Thr Val Lys Thr Gly Asp Leu Val Thr Tyr Asp Lys Glu Asn 

            20                  25                  30          





Gly Met His Lys Lys Val Phe Tyr Ser Phe Ile Asp Asp Lys Asn His 

        35                  40                  45              





Asn Lys Lys Leu Leu Val Ile Arg Thr Lys Gly Thr Ile Ala Gly Gln 

    50                  55                  60                  





Tyr Arg Val Tyr Ser Glu Glu Gly Ala Asn Lys Ser Gly Leu Ala Trp 

65                  70                  75                  80  





Pro Ser Ala Phe Lys Val Gln Leu Gln Leu Pro Asp Asn Glu Val Ala 

                85                  90                  95      





Gln Ile Ser Asp Tyr Tyr Pro Arg Asn Ser Ile Asp Thr Lys Glu Tyr 

            100                 105                 110         





Met Ser Thr Leu Thr Tyr Gly Phe Asn Gly Asn Val Thr Gly Asp Asp 

        115                 120                 125             





Thr Gly Lys Ile Gly Gly Leu Ile Gly Ala Asn Val Ser Ile Gly His 

    130                 135                 140                 





Thr Leu Lys Tyr Val Gln Pro Asp Phe Lys Thr Ile Leu Glu Ser Pro 

145                 150                 155                 160 





Thr Asp Lys Lys Val Gly Trp Lys Val Ile Phe Asn Asn Met Val Asn 

                165                 170                 175     





Gln Asn Trp Gly Pro Tyr Asp Arg Asp Ser Trp Asn Pro Val Tyr Gly 

            180                 185                 190         





Asn Gln Leu Phe Met Lys Thr Arg Asn Gly Ser Met Lys Ala Ala Asp 

        195                 200                 205             





Asn Phe Leu Asp Pro Asn Lys Ala Ser Ser Leu Leu Ser Ser Gly Phe 

    210                 215                 220                 





Ser Pro Asp Phe Ala Thr Val Ile Thr Met Asp Arg Lys Ala Ser Lys 

225                 230                 235                 240 





Gln Gln Thr Asn Ile Asp Val Ile Tyr Glu Arg Val Arg Asp Asp Tyr 

                245                 250                 255     





Gln Leu His Trp Thr Ser Thr Asn Trp Lys Gly Thr Asn Thr Lys Asp 

            260                 265                 270         





Lys Trp Thr Asp Arg Ser Ser Glu Arg Tyr Lys Ile Asp Trp Glu Lys 

        275                 280                 285             





Glu Glu Met Thr Asn 

    290             





<210> 6

<211> 15

<212> PRT

<213> Artificial Sequence



<220>

<221> source

<223> /note="Description of Artificial Sequence: Synthetic

      peptide"





<220>

<221> MISC_FEATURE

<222> (1)..(15) 

<223> /note="This sequence may encompass 1-3 'Gly Gly Gly Gly Ser'

      repeating units"



<400> 6

Gly Gly Gly Gly Ser Gly Gly Gly Gly Ser Gly Gly Gly Gly Ser 

1               5                   10                  15  





<210> 7

<211> 5

<212> PRT

<213> Artificial Sequence



<220>

<221> source

<223> /note="Description of Artificial Sequence: Synthetic

      peptide"



<400> 7

Arg Ser Lys Leu Gly 

1               5   





