                         SEQUENCE LISTING

<110>  Vilmorin and Cie
       Aguilar, Juan
       Justafre, Isabelle
       Lionneton, Eric
       Mazet, Julien
 
<120>  Resistance to ToLCNDV in Squash

<130>  VILM-018/01WO 313073-2053

<150>  US 62/253,427
<151>  2015-11-10

<160>  10    

<170>  PatentIn version 3.5

<210>  1
<211>  2738
<212>  DNA
<213>  Tomato Leaf Curl New Delhi Virus

<400>  1
accgaatggc cgcgaaattt tttggtgggc cctgaaccaa tagaattcaa gttacatggc       60

ttatttagtg cgtggggacc aataaataga cttgctcacc aagtttagat ccacaaacat      120

gtgggatcca ttattgcacg aatttccgga aagcgtccat ggtctaaggt gcatgttagc      180

tgtaaaatat ctccaagaga ttgagaagtc ctattctcca gacacagtcg gctacgatct      240

tgtccgagat ctcattttag ttctccgagc caagaactat gtcgaagcga ccagcagata      300

tcatcatttc aactcccgca tcgaaggtac gccgacggct caacttcgac agcccctatg      360

gaacccgtgc ctctgtcccc attgcccgcg tcacaaaagc aagggcctgg acgaacaggc      420

ccatgaacag aaaacccaga atgtacagaa tgtatagaag tcctgacgtg ccaaggggtt      480

gtgaaggccc ttgtaaggtg caatcgtttg aatcccggca cgatgtctcg catattggca      540

aagtcatgtg tgttagtgat gttactcgag gcaccggact cacacatcgc gtaggcaagc      600

gattttgtgt gaaatctgtc tatgtactgg gaaaaatatg gatggatgaa aatatcaaaa      660

ctaaaaatca tactaatagt gttatgttct ttcttgttcg tgaccggcgt ccaaccggaa      720

cccctcaaga ttttggggaa gttttcaata tgtttgataa tgaacctagc acagccacgg      780

tgaagaacat gcatcgtgat cgttatcaag tcttacggaa gtggcatgct actgtgacgg      840

gaggaacgta tgcatcaagg gagcaagcat tagttaggaa gtttgttagg gttaataatt      900

atgttgttta caatcaacaa gaggccggca agtatgagaa tcatactgaa aatgcattaa      960

tgttgtatat ggcctgtact catgcatcaa atcctgtgta tgctactttg aaaatccgga     1020

tctattttta tgattcggtc acaaattaat atatattgat ctttacatca tatgttgtcc     1080

atacatcaat cgttttatgc aagacattat ctaaaacatg ataaacagct cttattacat     1140

tacaaatgcc gactacacca agcatattta ggtacttaag gacctgcgtt ctaaaaaccc     1200

tcaagaaaat cccagtcgga gggcgtaagc ccgtccagat ttggaaagtt agaaaacact     1260

tgtgaagccc cagagctttc cgcaggttgt ggttgaactg tacttggact ttgattatgt     1320

cgtgattggt caggcacggt ctgctgtcgt gtttcaatac tttgaaatac aggggatttg     1380

gtacgtccca gataaagacg ccactctctt ctcgatccgc agtgatgtac tcccctgtgc     1440

gtgaatccgt gatcatggca attgatcgat atgtagtagg aacaaccgca ctgcagatca     1500

actcgcctcc tgcgaatgtt cttcttcttc ttctggggga gcgatgtttt cgcgactgga     1560

atagagtggt tcttcgagtg tgatgaagac tgcattcttg attgcccact gcttcagtgc     1620

tgcatttttt tcttcgtcaa gatattcttt ataactgctg tttggtcctt cattgcacag     1680

gaagatagtg ggaattccac ctttaatcat gacaggcttt ccgtacttcg tgttgctttg     1740

ccagtcacgt tgggccccca tgaattcttt aaaatgcttt agatagtggg gatcaacgtc     1800

gtcaatgacg ttgtaccagg catcattgct ataaactttt gggctaagat ccagatgacc     1860

acacaaataa ttgtggggtc ctaaacaacg cgcccacatt gttttgcccg tcctactatc     1920

gccctgtatg actatgctta ttggtcttaa aggccgcgca gckgaacaca ccacattaca     1980

tttggcccaa tcgacgagat ctgcaggaac tctgtcgaag gatgaaatcg aaaaaggaga     2040

aacataaacc tccgaacgag tctggaaaat gcgatctaaa ttattaatta aattatgaaa     2100

ctgcagaaca taatcttttg gtgctagttc ctttaaaacc tttaacgcat ctgtcttgtt     2160

tccagtgtta attgcctgag catatgcatc gttggccgtt tgttgaccac cacgagcaga     2220

tcgtccatcg atctgaaaaa caccccattc tagaacgtct ccgtctttgt cgatgtatgc     2280

cttgacgtcc gacgctgatt tagctccctg aatgttcgga tggaaatgtg ctgccctact     2340

tggggacacc aagtcgaaga atctgttatt cttgcactgg aatttccctt cgaattggac     2400

gagaacatgg atatgcggag acccatcctc gtgaagctct ctacagatct tgatgaattt     2460

cttcgaagtt ggggtttcta gggtttgtaa ttgggaaagt gcctcttcct ttgtaagaga     2520

gcacttcgga tacgtgagga aatagttttt ggcatttatt ctaaaacgac ttggcggagc     2580

cataaaaagt gtcgtttcga tctggtgtct ctcaacttcc tgtatgtaat tggtgtctgg     2640

agtcccatat ataggtaaga cactaaatgg cagaattgta attttgaaga gaaaattact     2700

ttaaatcaaa tttcaaaagc ggccattcgt ataatatt                             2738


<210>  2
<211>  2738
<212>  DNA
<213>  Tomato Leaf Curl New Dehli Virus

<400>  2
accgaatggc cgcgaaattt tttggtgggc cctgaaccaa tagaattcaa gttacatggc       60

ttatttagtg cgtggggacc aataaataga cttgctcacc aagtttagat ccacaaacat      120

gtgggatcca ttattgcacg aatttccgga aagcgtccat ggtctaaggt gcatgttagc      180

tgtaaaatat ctccaagaga ttgagaagtc ctattctcca gacacagtcg gctacgatct      240

tgtccgagat ctcattttag ttctccgagc caagaactat gtcgaagcga ccagcagata      300

tcatcatttc aactcccgca tcgaaggtac gccgacggct caacttcgac agcccctatg      360

gaacccgtgc ctctgtcccc attgcccgcg tcacaaaagc aagggcctgg acgaacaggc      420

ccatgaacag aaaacccaga atgtacagaa tgtatagaag tcctgacgtg ccaaggggtt      480

gtgaaggccc ttgtaaggtg caatcgtttg aatcccggca cgatgtctcg catattggca      540

aagtcatgtg tgttagtgat gttactcgag gcaccggact cacacatcgc gtaggcaagc      600

gattttgtgt gaaatctgtc tatgtactgg gaaaaatatg gatggatgaa aatatcaaaa      660

ctaaaaatca tactaatagt gttatgttct ttcttgttcg tgaccggcgt ccaaccggaa      720

cccctcaaga ttttggggaa gttttcaata tgtttgataa tgaacctagc acagccacgg      780

tgaagaacat gcatcgtgat cgttatcaag tcttacggaa gtggcatgct actgtgacgg      840

gaggaacgta tgcatcaagg gagcaagcat tagttaggaa gtttgttagg gttaataatt      900

atgttgttta caatcaacaa gaggccggca agtatgagaa tcatactgaa aatgcattaa      960

tgttgtatat ggcctgtact catgcatcaa atcctgtgta tgctactttg aaaatccgga     1020

tctattttta tgattcggtc acaaattaat atatattgat ctttacatca tatgttgtcc     1080

atacatcaat cgttttatgc aagacattat ctaaaacatg ataaacagct cttattacat     1140

tacaaatgcc gactacacca agcatattta ggtacttaag gacctgcgtt ctaaaaaccc     1200

tcaagaaaat cccagtcgga gggcgtaagc ccgtccagat atggaaagtt agaaaacact     1260

tgtgaagccc cagagctttc cgcaggttgt ggttgaactg tacttggatt ttgattatgt     1320

cgtgattggt caggcacggt ctgctgtcgt gtttcaatac tttgaaatac aggggatttg     1380

gtacgtccca gataaagacg ccactctctg ctcgatccgc agtgatgtac tcccctgtgc     1440

gtgaatccgt gatcatggca attgatcgat atgtagtagg aacaaccgca ctgcagatca     1500

actcgcctcc tgcgaatgtt cttcttcttc ttctggggga gcgatgtttt cgcgactgga     1560

atagagtggt tcttcgagtg tgatgaagac tgcattcttg attgcccact gcttcagtgc     1620

tgcatttttt tcttcgtcaa gatattcttt ataactgctg tttggtcctt cattgcacag     1680

gaagatagtg ggaattccac ctttaatcat gacaggcttt ccgtactttg tgttgctttg     1740

ccagtcacgt tgggccccca tgaattcttt aaagtgcttt agatagtggg gatcaacgtc     1800

gtcaatgacg ttgtaccagg catcattgct ataaactttt gggctaagat ccagatgacc     1860

acacaaataa ttgtggggtc ctaaacaacg cgcccacatt gttttgcccg tcctactatc     1920

tccctctatg actatgctta ttggtcttaa tggccgcgca gcggaacaca ccacattaca     1980

tttggcccaa tcgacgagat ctgcaggaac tctgtcgaag gatgaaatcg aaaaaggaga     2040

aacataaacc tccgaacgag tctggaaaat gcgatctaaa ttattaatta aattatgaaa     2100

ctgcagaaca taatcttttg gtgctagttc ctttaaaacc tttaacgcat ctgtcttgtt     2160

tccagtgtta attgcctgag catatgcatc gttggccgtt tgttgaccac cacgagcaga     2220

tcgtccatcg atctgaaaaa caccccattc tagaacgtct ccgtctttgt cgatgtatgt     2280

cttgacgtcc gacgctgatt tagctccctg aatgttcgga tggaaatgtg ctgccctact     2340

tggggacacc aagtcgaaga atctgttatt cttgcactgg aatttccctt cgaattggac     2400

gagaacatgg atatgcggag acccatcctc gtgaagctct ctacagatct tgatgaattt     2460

cttcgaagtt ggggtttcta gggtttgtaa ttgggaaagt gcctcttcct ttgtaagaga     2520

gcacttcgga tacgtgagga aatagttttt tgcatttatt ctaaaacgac ttggcggagc     2580

cataaaacgt gtcgtttcga tctggtgtct ctcaacttcc tgtatgtaat tggtgtctgg     2640

agtcccatat ataggtaaga cactaaatgg cagaattgta attttgaaga gaaaattact     2700

ttaattcaaa tttcaaaagc ggccattcgt ataatatt                             2738


<210>  3
<211>  970
<212>  DNA
<213>  Tomato Leaf Curl New Dehli Virus

<400>  3
tttggctgtg aaaggcccat gtaaggtgca atcgtttgaa tcccggcacg atgtctcgca       60

tattggcaaa gtcatgtgtg ttagtgatgt tactcgaggc accggactca cacatcgcgt      120

aggcaagcga ttttgtgtga aatctgtcta tgtactggga aaaatatgga tggatgaaaa      180

tatcaaaact aaaaatcata ctaatagtgt tatgttcttt cttgttcgtg accggcgtcc      240

aaccggaacc cctcaagatt ttggggaagt tttcaatatg tttgataatg aacctagcac      300

agccacggtg aagaacatgc atcgtgatcg ttatcaagtc ttacggaagt ggcatgctac      360

tgtgacggga ggaacgtatg catcaaggga gcaagcatta gttaggaagt ttgttagggt      420

taataattat gttgtttaca atcaacaaga ggccggcaag tatgagaatc atactgaaaa      480

tgcattaatg ttgtatatgg cctgtactca tgcatcaaat cctgtgtatg ctactttgaa      540

aatccggatc tatttttatg attcggtcac aaattaatat atattgatct ttacatcata      600

tgttgtccat acatcaatcg ttttatgcaa gacattatct aaaacatgat aaacagctct      660

tattacatta caaatgccga ctacaccaag catatttagg tacttaagga cctgcgttct      720

aaaaaccctc aagaaaatcc cagtcggagg gcgtaagccc gtccagattt ggaaagttag      780

aaaacacttg tgaagcccca gagctttccg caggttgtgg ttgaactgta cttggacttt      840

gattatgtcg tgattggtca ggcacggtct gctgtcgtgt ttcaatactt tgaaatacag      900

gggatttggt acgtcccaga taaagacgcc actctctgct cgatccgcag tgatgtactc      960

ccctgtgcgt                                                             970


<210>  4
<211>  20
<212>  DNA
<213>  Unknown

<220>
<223>  Forward primer

<400>  4
ggctgtgaag gcccatgtaa                                                   20


<210>  5
<211>  19
<212>  DNA
<213>  Unknown

<220>
<223>  Reverse primer

<400>  5
atggattcac gcacagggg                                                    19


<210>  6
<211>  23
<212>  DNA
<213>  Unknown

<220>
<223>  Forward primer

<400>  6
ttggatccat ggcgaagcga cca                                               23


<210>  7
<211>  23
<212>  DNA
<213>  Unknown

<220>
<223>  Reverse primer

<400>  7
aagagctctt aatttgtgac cga                                               23


<210>  8
<211>  71
<212>  DNA
<213>  Unknown

<220>
<223>  Flanking sequence of marker SQ-0006678

<220>
<221>  misc_feature
<222>  (1)..(71)
<223>  allele G: Resistant allele

<220>
<221>  misc_feature
<222>  (1)..(71)
<223>  allele A: Susceptible allele

<400>  8
gttgtaagtc cagcaatagc accaacgctt atcaaraaag aaacaaattt caagcctttg       60

gatgtaaaag c                                                            71


<210>  9
<211>  71
<212>  DNA
<213>  Unknown

<220>
<223>  Flanking sequence of marker SQ-0010844

<220>
<221>  misc_feature
<222>  (1)..(71)
<223>  allele G: Resistant allele

<220>
<221>  misc_feature
<222>  (1)..(71)
<223>  allele A: Susceptible allele

<400>  9
aaaagagaaa gttggaggac tgagttgcca agggcmggcc tgggatctga agtcattgtg       60

aaaatgaaaa a                                                            71


<210>  10
<211>  155
<212>  DNA
<213>  Unknown

<220>
<223>  Flanking sequence of marker SQ-0000209


<220>
<221>  misc_feature
<222>  (86)..(86)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (91)..(91)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (1)..(155)
<223>  allele G: Resistant allele

<220>
<221>  misc_feature
<222>  (1)..(155)
<223>  allele A: Susceptible allele

<400>  10
ttaacaccac cgattctcag ctccagtagc aagaccagta gactgccatg gaactccatc       60

gttctcagag gaaatcttcc accgcnacca nttcctcgac cactcttcca ctctatcgct      120

cmgctcctcc tctcgaagtc aggcttgaag aattc                                 155


