                         SEQUENCE LISTING

<110>  University of Southern California
       Sinha, Uttam K
       Masood, Rizwan
 
<120>  DEVELOPMENT OF PROGNOSTIC MARKERS DSG-3 FROM THE SALIVA OF ORAL 
       CANCER PATIENTS

<130>  374634-000689

<140>  PCT/US2016/060705
<141>  2016-11-04

<150>  US 62/252,338
<151>  2015-11-06

<160>  2     

<170>  PatentIn version 3.5

<210>  1
<211>  5561
<212>  DNA
<213>  Homo sapiens

<400>  1
aaagcagcag agacgctgca gagggctttt cttagacatc aactgcagac ggctggcagg       60

atagaagcag cggctcactt ggactttttc accagggaaa tcagagacaa tgatggggct      120

cttccccaga actacagggg ctctggccat cttcgtggtg gtcatattgg ttcatggaga      180

attgcgaata gagactaaag gtcaatatga tgaagaagag atgactatgc aacaagctaa      240

aagaaggcaa aaacgtgaat gggtgaaatt tgccaaaccc tgcagagaag gagaagataa      300

ctcaaaaaga aacccaattg ccaagattac ttcagattac caagcaaccc agaaaatcac      360

ctaccgaatc tctggagtgg gaatcgatca gccgcctttt ggaatctttg ttgttgacaa      420

aaacactgga gatattaaca taacagctat agtcgaccgg gaggaaactc caagcttcct      480

gatcacatgt cgggctctaa atgcccaagg actagatgta gagaaaccac ttatactaac      540

ggttaaaatt ttggatatta atgataatcc tccagtattt tcacaacaaa ttttcatggg      600

tgaaattgaa gaaaatagtg cctcaaactc actggtgatg atactaaatg ccacagatgc      660

agatgaacca aaccacttga attctaaaat tgccttcaaa attgtctctc aggaaccagc      720

aggcacaccc atgttcctcc taagcagaaa cactggggaa gtccgtactt tgaccaattc      780

tcttgaccga gagcaagcta gcagctatcg tctggttgtg agtggtgcag acaaagatgg      840

agaaggacta tcaactcaat gtgaatgtaa tattaaagtg aaagatgtca acgataactt      900

cccaatgttt agagactctc agtattcagc acgtattgaa gaaaatattt taagttctga      960

attacttcga tttcaagtaa cagatttgga tgaagagtac acagataatt ggcttgcagt     1020

atatttcttt acctctggga atgaaggaaa ttggtttgaa atacaaactg atcctagaac     1080

taatgaaggc atcctgaaag tggtgaaggc tctagattat gaacaactac aaagcgtgaa     1140

acttagtatt gctgtcaaaa acaaagctga atttcaccaa tcagttatct ctcgataccg     1200

agttcagtca accccagtca caattcaggt aataaatgta agagaaggaa ttgcattccg     1260

tcctgcttcc aagacattta ctgtgcaaaa aggcataagt agcaaaaaat tggtggatta     1320

tatcctggga acatatcaag ccatcgatga ggacactaac aaagctgcct caaatgtcaa     1380

atatgtcatg ggacgtaacg atggtggata cctaatgatt gattcaaaaa ctgctgaaat     1440

caaatttgtc aaaaatatga accgagattc tactttcata gttaacaaaa caatcacagc     1500

tgaggttctg gccatagatg aatacacggg taaaacttct acaggcacgg tatatgttag     1560

agtacccgat ttcaatgaca attgtccaac agctgtcctc gaaaaagatg cagtttgcag     1620

ttcttcacct tccgtggttg tctccgctag aacactgaat aatagataca ctggccccta     1680

tacatttgca ctggaagatc aacctgtaaa gttgcctgcc gtatggagta tcacaaccct     1740

caatgctacc tcggccctcc tcagagccca ggaacagata cctcctggag tataccacat     1800

ctccctggta cttacagaca gtcagaacaa tcggtgtgag atgccacgca gcttgacact     1860

ggaagtctgt cagtgtgaca acaggggcat ctgtggaact tcttacccaa ccacaagccc     1920

tgggaccagg tatggcaggc cgcactcagg gaggctgggg cctgccgcca tcggcctgct     1980

gctccttggt ctcctgctgc tgctgttggc cccccttctg ctgttgacct gtgactgtgg     2040

ggcaggttct actgggggag tgacaggtgg ttttatccca gttcctgatg gctcagaagg     2100

aacaattcat cagtggggaa ttgaaggagc ccatcctgaa gacaaggaaa tcacaaatat     2160

ttgtgtgcct cctgtaacag ccaatggagc cgatttcatg gaaagttctg aagtttgtac     2220

aaatacgtat gccagaggca cagcggtgga aggcacttca ggaatggaaa tgaccactaa     2280

gcttggagca gccactgaat ctggaggtgc tgcaggcttt gcaacaggga cagtgtcagg     2340

agctgcttca ggattcggag cagccactgg agttggcatc tgttcctcag ggcagtctgg     2400

aaccatgaga acaaggcatt ccactggagg aaccaataag gactacgctg atggggcgat     2460

aagcatgaat tttctggact cctacttttc tcagaaagca tttgcctgtg cggaggaaga     2520

cgatggccag gaagcaaatg actgcttgtt gatctatgat aatgaaggcg cagatgccac     2580

tggttctcct gtgggctccg tgggttgttg cagttttatt gctgatgacc tggatgacag     2640

cttcttggac tcacttggac ccaaatttaa aaaacttgca gagataagcc ttggtgttga     2700

tggtgaaggc aaagaagttc agccaccctc taaagacagc ggttatggga ttgaatcctg     2760

tggccatccc atagaagtcc agcagacagg atttgttaag tgccagactt tgtcaggaag     2820

tcaaggagct tctgctttgt ccacctctgg gtctgtccag ccagctgttt ccatccctga     2880

ccctctgcag catggtaact atttagtaac ggagacttac tcggcttctg gttccctcgt     2940

gcaaccttcc actgcaggct ttgatccact tctcacacaa aatgtgatag tgacagaaag     3000

ggtgatctgt cccatttcca gtgttcctgg caacctagct ggcccaacgc agctacgagg     3060

gtcacatact atgctctgta cagaggatcc ttgctcccgt ctaatatgac cagaatgagc     3120

tggaatacca cactgaccaa atctggatct ttggactaaa gtattcaaaa tagcatagca     3180

aagctcactg tattgggcta ataatttggc acttattagc ttctctcata aactgatcac     3240

gattataaat taaatgtttg ggttcatacc ccaaaagcaa tatgttgtca ctcctaattc     3300

tcaagtacta ttcaaattgt agtaaatctt aaagtttttc aaaaccctaa aatcatattc     3360

gccaggaaat tttcctaaac attcttaagc ttctattttt cccctgccaa aggaaggtgt     3420

ttatcatttt aaaatgcaat gtgatttagt ggattaagca ggagcgctgg ttcttgtctc     3480

cattgccttt tcttatatca ttgataatga tgtaagaatc acaaggggcc gggcgcggtg     3540

gctcacgcct gtaatcccag cactttggga ggccgaggca ggtggatcat gaggtcagga     3600

gatcgagacc atcctggcta acaaggtgaa accccgtctc tactaaaaat acaaaaaatt     3660

agccgggcgc agtggcgggc gcctgtagtc ccagctactc gggaggctga ggcaggagaa     3720

tggcatgaac ccgggaagcg gagcttgcag tgagccgaga ttgcgccact gcagtccgca     3780

gtccggcctg ggcgacagag cgagactccg tctcaaaaaa aaaaaaaaaa aaagaatcac     3840

aaggtatttg ctaaagcatt ttgagctgct tggaaaaagg gaagtagttg cagtagagtt     3900

tcttccatct tcttggtgct gggaagccat atatgtgtct tttactcaag ctaaggggta     3960

taagcttatg tgttgaattt gctacatcta tatttcacat attctcacaa taagagaatt     4020

ttgaaataga aatatcatag aacatttaag aaagtttagt ataaataata ttttgtgtgt     4080

tttaatccct ttgaagggat ctatccaaag aaaatatttt acactgagct ccttcctaca     4140

cgtctcagta acagatcctg tgttagtctt tgaaaatagc tcatttttta aatgtcagtg     4200

agtagatgta gcatacatat gatgtataat gacgtgtatt atgttaacaa tgtctgcaga     4260

ttttgtagga atacaaaaca tggccttttt tataagcaaa acgggccaat gactagaata     4320

acacataggg caatctgtga atatgtatta taagcagcat tccagaaaag tagttggtga     4380

aataattttc aagtcaaaaa gggatatgga aagggaatta tgagtaacct ctatttttta     4440

agccttgctt ttaaattaaa cagctacagc catttaagcc ttgaggataa taaagcttga     4500

gagtaataat gttaggttag caaaggttta gatgtatcac ttcatgcatg ctaccatgat     4560

agtaatgcag ctcttcgagt catttctggt cattcaagat attcaccctt ttgcccatag     4620

aaagcaccct acctcacctg cttactgaca ttgtcttagc tgatcacaag atcattatca     4680

gcctccatta ttccttactg tatataaaat acagagtttt atattttcct ttcttcgttt     4740

ttcaccatat tcaaaaccta aatttgtttt tgcagatgga atgcaaagta atcaagtgtt     4800

tgtgctttca cctagaaggg tgtggtcctg aaggaaagag gtcccctaaa tatcccccac     4860

cctggtgctc ctccctctcc ctggtaccct gactaccagg aagtcaggtg ctagagcagc     4920

tggagaagtg caggcagcct gtgcttccac agatgggggt gctgctgcaa caaggctttc     4980

aatgtgccca tcttaggtgg gagaagctag atcctgtgca gcagcctggt aagtcctgag     5040

gaggttccat tgctcttcct gctgctgtcc tttgcttctc aacggtggct cgctctacag     5100

tctagagcac atgcagctaa cttgtgcctc tgcttatgca tgagggttaa attaacaacc     5160

ataaccttca tttgaagttc aaaggtgtat tcaggatcct caaagcattt taaccttgcc     5220

gcttaaaacc caatttaccg tgaaatggga attttgctgc attgttaaac tgtagtggaa     5280

accatgctat agtaataaag gttatataag agagaaattg aaattaaatg tgtttttaaa     5340

tttcaaaaaa aaatcaatct ttaggatgac ttaaaaattg atttgccatg taaaatgtat     5400

ctgcattttt tacacaaaac ttgttttaag cataaaattt taaaactgta ctacttgatg     5460

tattatacat tttgaaccat atgtattaaa ccataaacag tataatgttg ttataataaa     5520

acaggcaata aatttataaa taaaagctga aaaaaaaaaa a                         5561


<210>  2
<211>  999
<212>  PRT
<213>  Homo sapiens

<400>  2

Met Met Gly Leu Phe Pro Arg Thr Thr Gly Ala Leu Ala Ile Phe Val 
1               5                   10                  15      


Val Val Ile Leu Val His Gly Glu Leu Arg Ile Glu Thr Lys Gly Gln 
            20                  25                  30          


Tyr Asp Glu Glu Glu Met Thr Met Gln Gln Ala Lys Arg Arg Gln Lys 
        35                  40                  45              


Arg Glu Trp Val Lys Phe Ala Lys Pro Cys Arg Glu Gly Glu Asp Asn 
    50                  55                  60                  


Ser Lys Arg Asn Pro Ile Ala Lys Ile Thr Ser Asp Tyr Gln Ala Thr 
65                  70                  75                  80  


Gln Lys Ile Thr Tyr Arg Ile Ser Gly Val Gly Ile Asp Gln Pro Pro 
                85                  90                  95      


Phe Gly Ile Phe Val Val Asp Lys Asn Thr Gly Asp Ile Asn Ile Thr 
            100                 105                 110         


Ala Ile Val Asp Arg Glu Glu Thr Pro Ser Phe Leu Ile Thr Cys Arg 
        115                 120                 125             


Ala Leu Asn Ala Gln Gly Leu Asp Val Glu Lys Pro Leu Ile Leu Thr 
    130                 135                 140                 


Val Lys Ile Leu Asp Ile Asn Asp Asn Pro Pro Val Phe Ser Gln Gln 
145                 150                 155                 160 


Ile Phe Met Gly Glu Ile Glu Glu Asn Ser Ala Ser Asn Ser Leu Val 
                165                 170                 175     


Met Ile Leu Asn Ala Thr Asp Ala Asp Glu Pro Asn His Leu Asn Ser 
            180                 185                 190         


Lys Ile Ala Phe Lys Ile Val Ser Gln Glu Pro Ala Gly Thr Pro Met 
        195                 200                 205             


Phe Leu Leu Ser Arg Asn Thr Gly Glu Val Arg Thr Leu Thr Asn Ser 
    210                 215                 220                 


Leu Asp Arg Glu Gln Ala Ser Ser Tyr Arg Leu Val Val Ser Gly Ala 
225                 230                 235                 240 


Asp Lys Asp Gly Glu Gly Leu Ser Thr Gln Cys Glu Cys Asn Ile Lys 
                245                 250                 255     


Val Lys Asp Val Asn Asp Asn Phe Pro Met Phe Arg Asp Ser Gln Tyr 
            260                 265                 270         


Ser Ala Arg Ile Glu Glu Asn Ile Leu Ser Ser Glu Leu Leu Arg Phe 
        275                 280                 285             


Gln Val Thr Asp Leu Asp Glu Glu Tyr Thr Asp Asn Trp Leu Ala Val 
    290                 295                 300                 


Tyr Phe Phe Thr Ser Gly Asn Glu Gly Asn Trp Phe Glu Ile Gln Thr 
305                 310                 315                 320 


Asp Pro Arg Thr Asn Glu Gly Ile Leu Lys Val Val Lys Ala Leu Asp 
                325                 330                 335     


Tyr Glu Gln Leu Gln Ser Val Lys Leu Ser Ile Ala Val Lys Asn Lys 
            340                 345                 350         


Ala Glu Phe His Gln Ser Val Ile Ser Arg Tyr Arg Val Gln Ser Thr 
        355                 360                 365             


Pro Val Thr Ile Gln Val Ile Asn Val Arg Glu Gly Ile Ala Phe Arg 
    370                 375                 380                 


Pro Ala Ser Lys Thr Phe Thr Val Gln Lys Gly Ile Ser Ser Lys Lys 
385                 390                 395                 400 


Leu Val Asp Tyr Ile Leu Gly Thr Tyr Gln Ala Ile Asp Glu Asp Thr 
                405                 410                 415     


Asn Lys Ala Ala Ser Asn Val Lys Tyr Val Met Gly Arg Asn Asp Gly 
            420                 425                 430         


Gly Tyr Leu Met Ile Asp Ser Lys Thr Ala Glu Ile Lys Phe Val Lys 
        435                 440                 445             


Asn Met Asn Arg Asp Ser Thr Phe Ile Val Asn Lys Thr Ile Thr Ala 
    450                 455                 460                 


Glu Val Leu Ala Ile Asp Glu Tyr Thr Gly Lys Thr Ser Thr Gly Thr 
465                 470                 475                 480 


Val Tyr Val Arg Val Pro Asp Phe Asn Asp Asn Cys Pro Thr Ala Val 
                485                 490                 495     


Leu Glu Lys Asp Ala Val Cys Ser Ser Ser Pro Ser Val Val Val Ser 
            500                 505                 510         


Ala Arg Thr Leu Asn Asn Arg Tyr Thr Gly Pro Tyr Thr Phe Ala Leu 
        515                 520                 525             


Glu Asp Gln Pro Val Lys Leu Pro Ala Val Trp Ser Ile Thr Thr Leu 
    530                 535                 540                 


Asn Ala Thr Ser Ala Leu Leu Arg Ala Gln Glu Gln Ile Pro Pro Gly 
545                 550                 555                 560 


Val Tyr His Ile Ser Leu Val Leu Thr Asp Ser Gln Asn Asn Arg Cys 
                565                 570                 575     


Glu Met Pro Arg Ser Leu Thr Leu Glu Val Cys Gln Cys Asp Asn Arg 
            580                 585                 590         


Gly Ile Cys Gly Thr Ser Tyr Pro Thr Thr Ser Pro Gly Thr Arg Tyr 
        595                 600                 605             


Gly Arg Pro His Ser Gly Arg Leu Gly Pro Ala Ala Ile Gly Leu Leu 
    610                 615                 620                 


Leu Leu Gly Leu Leu Leu Leu Leu Leu Ala Pro Leu Leu Leu Leu Thr 
625                 630                 635                 640 


Cys Asp Cys Gly Ala Gly Ser Thr Gly Gly Val Thr Gly Gly Phe Ile 
                645                 650                 655     


Pro Val Pro Asp Gly Ser Glu Gly Thr Ile His Gln Trp Gly Ile Glu 
            660                 665                 670         


Gly Ala His Pro Glu Asp Lys Glu Ile Thr Asn Ile Cys Val Pro Pro 
        675                 680                 685             


Val Thr Ala Asn Gly Ala Asp Phe Met Glu Ser Ser Glu Val Cys Thr 
    690                 695                 700                 


Asn Thr Tyr Ala Arg Gly Thr Ala Val Glu Gly Thr Ser Gly Met Glu 
705                 710                 715                 720 


Met Thr Thr Lys Leu Gly Ala Ala Thr Glu Ser Gly Gly Ala Ala Gly 
                725                 730                 735     


Phe Ala Thr Gly Thr Val Ser Gly Ala Ala Ser Gly Phe Gly Ala Ala 
            740                 745                 750         


Thr Gly Val Gly Ile Cys Ser Ser Gly Gln Ser Gly Thr Met Arg Thr 
        755                 760                 765             


Arg His Ser Thr Gly Gly Thr Asn Lys Asp Tyr Ala Asp Gly Ala Ile 
    770                 775                 780                 


Ser Met Asn Phe Leu Asp Ser Tyr Phe Ser Gln Lys Ala Phe Ala Cys 
785                 790                 795                 800 


Ala Glu Glu Asp Asp Gly Gln Glu Ala Asn Asp Cys Leu Leu Ile Tyr 
                805                 810                 815     


Asp Asn Glu Gly Ala Asp Ala Thr Gly Ser Pro Val Gly Ser Val Gly 
            820                 825                 830         


Cys Cys Ser Phe Ile Ala Asp Asp Leu Asp Asp Ser Phe Leu Asp Ser 
        835                 840                 845             


Leu Gly Pro Lys Phe Lys Lys Leu Ala Glu Ile Ser Leu Gly Val Asp 
    850                 855                 860                 


Gly Glu Gly Lys Glu Val Gln Pro Pro Ser Lys Asp Ser Gly Tyr Gly 
865                 870                 875                 880 


Ile Glu Ser Cys Gly His Pro Ile Glu Val Gln Gln Thr Gly Phe Val 
                885                 890                 895     


Lys Cys Gln Thr Leu Ser Gly Ser Gln Gly Ala Ser Ala Leu Ser Thr 
            900                 905                 910         


Ser Gly Ser Val Gln Pro Ala Val Ser Ile Pro Asp Pro Leu Gln His 
        915                 920                 925             


Gly Asn Tyr Leu Val Thr Glu Thr Tyr Ser Ala Ser Gly Ser Leu Val 
    930                 935                 940                 


Gln Pro Ser Thr Ala Gly Phe Asp Pro Leu Leu Thr Gln Asn Val Ile 
945                 950                 955                 960 


Val Thr Glu Arg Val Ile Cys Pro Ile Ser Ser Val Pro Gly Asn Leu 
                965                 970                 975     


Ala Gly Pro Thr Gln Leu Arg Gly Ser His Thr Met Leu Cys Thr Glu 
            980                 985                 990         


Asp Pro Cys Ser Arg Leu Ile 
        995                 


