                         SEQUENCE LISTING

<110>  Cornell University
 
<120>  METHODS OF ENHANCING TRANSLATION ABILITY OF RNA MOLECULES, 
       TREATMENTS, AND KITS

<130>  29543.7651

<140>  PCT/US2016/042550
<141>  2016-07-15

<150>  US 62/193,464
<151>  2015-07-16

<160>  60    

<170>  PatentIn version 3.5

<210>  1
<211>  54
<212>  RNA
<213>  Artificial

<220>
<223>  B-globin 5' UTR

<400>  1
gacacuugcu uuugacacaa cuguguuuac uugcaauccc ccaaaacaga caga             54


<210>  2
<211>  49
<212>  RNA
<213>  Artificial

<220>
<223>  B-globin 1 A mid 5' UTR

<400>  2
ggcucuugcu uuugccucuu cugugugacu ugccuucccc cuugucugc                   49


<210>  3
<211>  49
<212>  RNA
<213>  Artificial

<220>
<223>  B-globin 3 As 5' UTR

<400>  3
gacucuugcu uuugccucuu cuguguugcu ugacuucccc cuuguugac                   49


<210>  4
<211>  49
<212>  RNA
<213>  Artificial

<220>
<223>  B-globin 0 As 5' UTR

<400>  4
ggcucuugcu uuugccucuu cuguguugcu ugccuucccc cuugucugc                   49


<210>  5
<211>  49
<212>  RNA
<213>  Artificial

<220>
<223>  B-globin 1 A 5' end 5' UTR

<400>  5
gacucuugcu uuugccucuu cuguguugcu ugccuucccc cuugucugc                   49


<210>  6
<211>  49
<212>  RNA
<213>  Artificial

<220>
<223>  B-globin 1 A 3' end 5' UTR

<400>  6
ggcucuugcu uuugccucuu cuguguugcu ugccuucccc cuuguugac                   49


<210>  7
<211>  42
<212>  RNA
<213>  Artificial

<220>
<223>  HIST2H2BE 5' UTR

<400>  7
acuucuuuuc uuggcuaagc cgcguuugua cugugucuua cc                          42


<210>  8
<211>  49
<212>  RNA
<213>  Artificial

<220>
<223>  pGL4.34 vector 5' UTR

<400>  8
ggaagcucga cuuccagcuu ggcaauccgg uacuguuggu aaagccacc                   49


<210>  9
<211>  82
<212>  RNA
<213>  Artificial

<220>
<223>  B-globin Hairpin 5' UTR

<400>  9
gggccccgcc cggugucggg cggggcccga cacuugcuuu ugacacaacu guguuuacuu       60

gcaauccccc aaaacagaca ga                                                82


<210>  10
<211>  29
<212>  RNA
<213>  Artificial

<220>
<223>  HSPA1A template

<400>  10
ucccuacgag accccuuccg accaggacc                                         29


<210>  11
<211>  23
<212>  DNA
<213>  Artificial

<220>
<223>  Primer

<400>  11
agggatgctc tggggaaggc tgg                                               23


<210>  12
<211>  30
<212>  RNA
<213>  Artificial

<220>
<223>  Positive control

<400>  12
cgauccucgg ccaggaccag ccuuccccag                                        30


<210>  13
<211>  30
<212>  RNA
<213>  Artificial

<220>
<223>  Negative control

<400>  13
cgauccucgg ccaggaccag ccuuccccag                                        30


<210>  14
<211>  22
<212>  DNA
<213>  Artificial

<220>
<223>  Gapdh Forward primer

<400>  14
caaggagtaa gaaaccctgg ac                                                22


<210>  15
<211>  22
<212>  DNA
<213>  Artificial

<220>
<223>  Gapdh Reverse primer

<400>  15
ggatggaaat tgtgagggag at                                                22


<210>  16
<211>  20
<212>  DNA
<213>  Artificial

<220>
<223>  Hsp70 Forward primer

<400>  16
tggtgcagtc cgacatgaag                                                   20


<210>  17
<211>  22
<212>  DNA
<213>  Artificial

<220>
<223>  Hsp70 Reverse primer

<400>  17
gctgagagtc gttgaagtag gc                                                22


<210>  18
<211>  20
<212>  DNA
<213>  Artificial

<220>
<223>  Fluc Forward primer

<400>  18
atccggaagc gaccaacgcc                                                   20


<210>  19
<211>  20
<212>  DNA
<213>  Artificial

<220>
<223>  Fluc Reverse primer

<400>  19
gtcgggaaga cctgccacgc                                                   20


<210>  20
<211>  20
<212>  DNA
<213>  Artificial

<220>
<223>  pGL4.34 Luc Forward primer

<400>  20
ttcgtgagca agaaagggct                                                   20


<210>  21
<211>  20
<212>  DNA
<213>  Artificial

<220>
<223>  pGL4.34 Luc Reverse primer

<400>  21
agtcgtactc gttgaagccg                                                   20


<210>  22
<211>  20
<212>  DNA
<213>  Artificial

<220>
<223>  GAPDH Forward primer

<400>  22
aaatcaagtg gggcgatgct                                                   20


<210>  23
<211>  20
<212>  DNA
<213>  Artificial

<220>
<223>  GAPDH Reverse primer

<400>  23
caaatgagcc ccagccttct                                                   20


<210>  24
<211>  21
<212>  DNA
<213>  Artificial

<220>
<223>  SETD1A Forward primer

<400>  24
agcgggctat tctctcactt g                                                 21


<210>  25
<211>  20
<212>  DNA
<213>  Artificial

<220>
<223>  SETD1A Reverse primer

<400>  25
gctttgcttc tcttccccgt                                                   20


<210>  26
<211>  20
<212>  DNA
<213>  Artificial

<220>
<223>  ITPRIPL2 Forward primer

<400>  26
aacacttgag ctgggagagg                                                   20


<210>  27
<211>  21
<212>  DNA
<213>  Artificial

<220>
<223>  ITPRIPL2 Reverse primer

<400>  27
gaagacgcgt agattgaggg t                                                 21


<210>  28
<211>  20
<212>  DNA
<213>  Artificial

<220>
<223>  PNMA1 Forward primer

<400>  28
ctggctagtc tcccaaacgg                                                   20


<210>  29
<211>  20
<212>  DNA
<213>  Artificial

<220>
<223>  PNMA1 Reverse primer

<400>  29
catcttgcgt ctgggtctgg                                                   20


<210>  30
<211>  18
<212>  DNA
<213>  Artificial

<220>
<223>  BMP6 Forward primer

<400>  30
gagggccagg aaggggaa                                                     18


<210>  31
<211>  15
<212>  DNA
<213>  Artificial

<220>
<223>  BMP6 Reverse primer

<400>  31
cgtggagcgg cggag                                                        15


<210>  32
<211>  18
<212>  DNA
<213>  Artificial

<220>
<223>  T7 phi 2.5 promoter sequence

<400>  32
taatacgact cactatta                                                     18


<210>  33
<211>  49
<212>  RNA
<213>  Artificial

<220>
<223>  pGL4.34 5' UTR

<400>  33
ggaagcucga cuuccagcuu ggcaauccgg uacuguuggu aaagccacc                   49


<210>  34
<211>  54
<212>  RNA
<213>  Artificial

<220>
<223>  Beta-globin

<400>  34
gacacuugcu uuugacacaa cuguguuuac uugcaauccc ccaaaacaga caga             54


<210>  35
<211>  49
<212>  RNA
<213>  Artificial

<220>
<223>  Beta-globin 3 As

<400>  35
gacucuugcu uuugccucuu cuguguugcu ugacuucccc cuuguugac                   49


<210>  36
<211>  49
<212>  RNA
<213>  Artificial

<220>
<223>  Beta-globin 1 A 5' end

<400>  36
gacucuugcu uuugccucuu cuguguugcu ugccuucccc cuugucugc                   49


<210>  37
<211>  49
<212>  RNA
<213>  Artificial

<220>
<223>  Beta-globin 1 A mid

<400>  37
ggcucuugcu uuugccucuu cugugugacu ugccuucccc cuugucugc                   49


<210>  38
<211>  49
<212>  RNA
<213>  Artificial

<220>
<223>  Beta-globin 1 A 3' end

<400>  38
ggcucuugcu uuugccucuu cuguguugcu ugccuucccc cuuguugac                   49


<210>  39
<211>  49
<212>  RNA
<213>  Artificial

<220>
<223>  Beta-globin 0 As

<400>  39
ggcucuugcu uuugccucuu cuguguugcu ugccuucccc cuugucugc                   49


<210>  40
<211>  42
<212>  RNA
<213>  Artificial

<220>
<223>  HIST2H2BE

<400>  40
acuucuuuuc uuggcuaagc cgcguuugua cugugucuua cc                          42


<210>  41
<211>  82
<212>  RNA
<213>  Artificial

<220>
<223>  Beta-globin hairpin

<400>  41
gggccccgcc cggugucggg cggggcccga cacuugcuuu ugacacaacu guguuuacuu       60

gcaauccccc aaaacagaca ga                                                82


<210>  42
<211>  49
<212>  RNA
<213>  Artificial

<220>
<223>  Beta-globin 1 A mid UAC

<400>  42
ggcucuugcu uuugccucuu cuguguuacu ugccuucccc cuugucugc                   49


<210>  43
<211>  49
<212>  RNA
<213>  Artificial

<220>
<223>  Beta-globin 1 A mid CAG

<400>  43
ggcucuugcu uuugccucuu cugugucagu ugccuucccc cuugucugc                   49


<210>  44
<211>  92
<212>  RNA
<213>  Artificial

<220>
<223>  Beta-globin 2 AUG

<400>  44
gacacuugcu uuuagaaugg acaacugugu uuacuugcaa ucccccaaaa cagacugcau       60

cuguccagug aggagaaguc ugcggagaau gg                                     92


<210>  45
<211>  55
<212>  RNA
<213>  Artificial

<220>
<223>  Beta-globin

<400>  45
ggacacuugc uuuugacaca acuguguuua cuugcaaucc cccaaaacag acaga            55


<210>  46
<211>  23
<212>  DNA
<213>  Artificial

<220>
<223>  biotin-labeled probe

<400>  46
ttcataacat atctctgtct ctt                                               23


<210>  47
<211>  21
<212>  DNA
<213>  Artificial

<220>
<223>  Fto target sequence

<400>  47
gctgaggcag ttctggtttc a                                                 21


<210>  48
<211>  21
<212>  DNA
<213>  Artificial

<220>
<223>  scramble control

<400>  48
cctaaggtta agtcgccctc g                                                 21


<210>  49
<211>  84
<212>  RNA
<213>  Artificial

<220>
<223>  probe

<400>  49
gggacuggga cugggacugg gacugggacu gggacuggga cugggacugg gacugggacu       60

gggacuggga cugggacugg gacu                                              84


<210>  50
<211>  84
<212>  RNA
<213>  Artificial

<220>
<223>  probe

<400>  50
gguacuggua cugguacugg uacugguacu gguacuggua cugguacugg uacugguacu       60

gguacuggua cugguacugg uacu                                              84


<210>  51
<211>  90
<212>  RNA
<213>  Artificial

<220>
<223>  probe

<400>  51
ggcaguggca guggcagugg caguggcagu ggcaguggca guggcagugg caguggcagu       60

ggcaguggca guggcagugg caguggcagu                                        90


<210>  52
<211>  78
<212>  RNA
<213>  Artificial

<220>
<223>  probe

<400>  52
gggacuggga cugggacugg gacugggacu gggacuggga cugggacugg gacugggacu       60

gggacuggga cugggacu                                                     78


<210>  53
<211>  45
<212>  RNA
<213>  Artificial

<220>
<223>  probe

<400>  53
gugugugugu ggacuggacu ggacuggacu ggacuggacu ggacu                       45


<210>  54
<211>  84
<212>  RNA
<213>  Artificial

<220>
<223>  m6A RNA probe

<400>  54
gggacuggga cugggacugg gacugggacu gggacuggga cugggacugg gacugggacu       60

gggacuggga cugggacugg gacu                                              84


<210>  55
<211>  26
<212>  DNA
<213>  Artificial

<220>
<223>  Hsc70 Forward primer

<400>  55
cccaagcttg gtctcattga acgcgg                                            26


<210>  56
<211>  26
<212>  DNA
<213>  Artificial

<220>
<223>  Hsc70 Reverse primer

<400>  56
cgggatcccc ttagacatgg ttgctt                                            26


<210>  57
<211>  34
<212>  DNA
<213>  Artificial

<220>
<223>  Tubulin Forward primer

<400>  57
ggcaagcttt gcgcctgtgc tgaattccag ctgc                                   34


<210>  58
<211>  29
<212>  DNA
<213>  Artificial

<220>
<223>  Tubulin Reverse primer

<400>  58
ggcggatccg catcgccgat cagacctag                                         29


<210>  59
<211>  36
<212>  DNA
<213>  Artificial

<220>
<223>  DNA Bridge 1

<400>  59
ggtcctggcc gaggatcggg aacgcgccgc tcgctc                                 36


<210>  60
<211>  36
<212>  DNA
<213>  Artificial

<220>
<223>  DNA Bridge 2

<400>  60
ctccgcggca gggatgctct ggggaaggct ggtcct                                 36


