                         SEQUENCE LISTING

<110>  Kennedy, Andrew Bodnar
       Smolke, Christina D.
 
<120>  SYNTHETIC HAMMERHEAD RIBOZYMES WITH LIGAND-RESPONSIVE TERTIARY 
       INTERACTIONS

<130>  STAN-1228WO

<150>  US 62/186,767
<151>  2015-06-30

<160>  28    

<170>  PatentIn version 3.5

<210>  1
<211>  125
<212>  RNA
<213>  Artificial sequence.

<220>
<223>  Synthetic nucleic acid.

<400>  1
aaacaaacaa agcugucacc ggaugugcuu uccggucuga ugaguccguu guccauacca       60

gcaucgucuu gaugcccuug gcagggacgg gacggaggac gaaacagcaa aaagaaaaau      120

aaaaa                                                                  125


<210>  2
<211>  125
<212>  RNA
<213>  Artificial sequence.

<220>
<223>  Synthetic nucleic acid.

<400>  2
aaacaaacaa agcugucacc ggaaucaagg uccggucuga ugaguccguu guccauacca       60

gcaucgucuu gaugcccuug gcagggacgg gacggaggac gaaacagcaa aaagaaaaau      120

aaaaa                                                                  125


<210>  3
<211>  125
<212>  RNA
<213>  Artificial sequence.

<220>
<223>  Synthetic nucleic acid.

<400>  3
aaacaaacaa agcugucacc ggaugugcuu uccggucuga ugaguccguu gaguauacca       60

gcaucgucuu gaugcccuug gcagacugua uacggaggac gaaacagcaa aaagaaaaau      120

aaaaa                                                                  125


<210>  4
<211>  11
<212>  RNA
<213>  Artificial sequence.

<220>
<223>  Synthetic nucleic acid.

<400>  4
aaacaaacaa a                                                            11


<210>  5
<211>  17
<212>  RNA
<213>  Artificial sequence.

<220>
<223>  Synthetic nucleic acid.

<400>  5
aaaaagaaaa auaaaaa                                                      17


<210>  6
<211>  22
<212>  RNA
<213>  Artificial sequence.

<220>
<223>  Synthetic nucleic acid.

<400>  6
gggaaacaaa caaaguuguu uu                                                22


<210>  7
<211>  52
<212>  RNA
<213>  Artificial sequence.

<220>
<223>  Synthetic nucleic acid.

<400>  7
gcugucaccg gaugugcuuu ccggucugau gaguccguga ggacgaaaca gc               52


<210>  8
<211>  52
<212>  RNA
<213>  Artificial sequence.

<220>
<223>  Synthetic nucleic acid.

<400>  8
gcugucaccg gaugugcuuu ccgguacgug agguccguga ggacagaaca gc               52


<210>  9
<211>  30
<212>  RNA
<213>  Artificial sequence.

<220>
<223>  Synthetic nucleic acid.

<400>  9
auaccagcau cgucuugaug cccuuggcag                                        30


<210>  10
<211>  30
<212>  RNA
<213>  Artificial sequence.

<220>
<223>  Synthetic nucleic acid.

<400>  10
auaccagcau cgucuugaug cccuuggaag                                        30


<210>  11
<211>  19
<212>  RNA
<213>  Artificial sequence.

<220>
<223>  Synthetic nucleic acid.

<400>  11
gcuuguccuu uaauggucc                                                    19


<210>  12
<211>  47
<212>  RNA
<213>  Artificial sequence.

<220>
<223>  Synthetic nucleic acid.

<400>  12
aaaacauacc agauuucgau cuggagaggu gaagaauucg accaccu                     47


<210>  13
<211>  69
<212>  RNA
<213>  Artificial sequence.

<220>
<223>  Synthetic nucleic acid.

<400>  13
aaacaaacaa agcugucacc ggauccgguc ugaugagucc ggacgaaaca gcaaaaagaa       60

aaauaaaaa                                                               69


<210>  14
<211>  47
<212>  DNA
<213>  Artificial sequence.

<220>
<223>  Synthetic nucleic acid.

<400>  14
aatttaatac gactcactat agggaaacaa acaaagctgt caccgga                     47


<210>  15
<211>  29
<212>  DNA
<213>  Artificial sequence.

<220>
<223>  Synthetic nucleic acid.

<400>  15
tttttatttt tctttttgct gtttcgtcc                                         29


<210>  16
<211>  23
<212>  DNA
<213>  Artificial sequence.

<220>
<223>  Synthetic nucleic acid.

<400>  16
ttctaatacg actcactata ggg                                               23


<210>  17
<211>  18
<212>  DNA
<213>  Artificial sequence.

<220>
<223>  Synthetic nucleic acid.

<400>  17
aacaaagctg tttcgtcc                                                     18


<210>  18
<211>  148
<212>  DNA
<213>  Artificial sequence.

<220>
<223>  Synthetic nucleic acid.

<400>  18
ttctaatacg actcactata ggggggaaac aaacaaagtt gttttgctgt caccggatgt       60

gctttccggt ctgatgagtc cgttgtccat accagcatcg tcttgatgcc cttggcaggg      120

acgggacgga ggacgaaaca gctttgtt                                         148


<210>  19
<211>  148
<212>  DNA
<213>  Artificial sequence.

<220>
<223>  Synthetic nucleic acid.

<400>  19
ttctaatacg actcactata ggggggaaac aaacaaagtt gttttgctgt caccggaatc       60

aaggtccggt ctgatgagtc cgttgtccat accagcatcg tcttgatgcc cttggcaggg      120

acgggacgga ggacgaaaca gctttgtt                                         148


<210>  20
<211>  148
<212>  DNA
<213>  Artificial sequence.

<220>
<223>  Synthetic nucleic acid.

<400>  20
ttctaatacg actcactata ggggggaaac aaacaaagtt gttttgctgt caccggatgt       60

gctttccggt ctgatgagtc cgttgagtat accagcatcg tcttgatgcc cttggcagac      120

tgtatacgga ggacgaaaca gctttgtt                                         148


<210>  21
<211>  124
<212>  DNA
<213>  Artificial sequence.

<220>
<223>  Synthetic nucleic acid.

<400>  21
ttctaatacg actcactata gggaaacaaa caaagttgtt ttgctgtcac cggaatacca       60

gcatcgtctt gatgcccttg gaagtccggt ctgatgagtc caaaaaggac gaaacagctt      120

tgtt                                                                   124


<210>  22
<211>  75
<212>  RNA
<213>  Artificial sequence.

<220>
<223>  Synthetic nucleic acid.


<220>
<221>  misc_feature
<222>  (13)..(16)
<223>  This stretch of nucleotides can be any nucleotide.

<220>
<221>  misc_feature
<222>  (61)..(61)
<223>  This nucleotide can be C or A.

<400>  22
gcugucaccg gannnnuccg gucugaugag uccauaccag caucgucuug augcccuugg       60

magggacgaa acagc                                                        75


<210>  23
<211>  49
<212>  RNA
<213>  Artificial sequence.

<220>
<223>  Synthetic nucleic acid.


<220>
<221>  misc_feature
<222>  (13)..(16)
<223>  This stretch of nucleotides can be any nucleotide.

<220>
<221>  misc_feature
<222>  (34)..(37)
<223>  This stretch of nucleotides can be any nucleotide.

<400>  23
gcugucaccg gannnnuccg gucugaugag uccnnnngga cgaaacagc                   49


<210>  24
<211>  92
<212>  RNA
<213>  Artificial sequence.

<220>
<223>  Synthetic nucleic acid.


<220>
<221>  misc_feature
<222>  (13)..(16)
<223>  This stretch of nucleotides can be any nucleotide.

<400>  24
gcugucaccg gannnnuccg gucugaugag uccaaaacau accagauuuc gaucuggaga       60

ggugaagaau ucgaccaccu ggacgaaaca gc                                     92


<210>  25
<211>  64
<212>  RNA
<213>  Artificial sequence.

<220>
<223>  Synthetic nucleic acid.


<220>
<221>  misc_feature
<222>  (13)..(16)
<223>  This stretch of nucleotides can be any nucleotide.

<400>  25
gcugucaccg gannnnuccg gucugaugag uccgcuuguc cuuuaauggu ccggacgaaa       60

cagc                                                                    64


<210>  26
<211>  75
<212>  RNA
<213>  Artificial sequence.

<220>
<223>  Synthetic nucleic acid.


<220>
<221>  misc_feature
<222>  (60)..(63)
<223>  This stretch of nucleotides can be any nucleotide.

<400>  26
gcugucaccg gaauaccagc aucgucuuga ugcccuuggc aguccggucu gaugaguccn       60

nnnggacgaa acagc                                                        75


<210>  27
<211>  93
<212>  RNA
<213>  Artificial sequence.

<220>
<223>  Synthetic nucleic acid.


<220>
<221>  misc_feature
<222>  (57)..(60)
<223>  This stretch of nucleotides can be any nucleotide.

<220>
<221>  misc_feature
<222>  (78)..(81)
<223>  This stretch of nucleotides can be any nucleotide.

<400>  27
ggugauacca gcaucgucuu gaugcccuug gcagcaccaa aaaagcuguc accggannnn       60

uccggucuga ugaguccnnn nggacgaaac agc                                    93


<210>  28
<211>  75
<212>  RNA
<213>  Artificial sequence.

<220>
<223>  Synthetic nucleic acid.


<220>
<221>  misc_feature
<222>  (60)..(63)
<223>  This stretch of nucleotides can be any nucleotide.

<400>  28
gcugucguug ggauaccagc aucgucuuga ugcccuuggc aguccggucu gaugaguccn       60

nnnggacgaa acagc                                                        75


