                         SEQUENCE LISTING

<110>  The Regents of the University of California
       Townsley, Brad
       Covington, Michael F.
       Sinha, Neelima F.
 
<120>  COMPOSITIONS AND METHODS FOR CONSTRUCTING STRAND SPECIFIC cDNA 
       LIBRARIES

<130>  1008757

<140>  PCT/US2016/030288
<141>  2016-04-29

<150>  US 62/154,584
<151>  2015-04-29

<160>  30    

<170>  PatentIn version 3.5

<210>  1
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic oligonucleotide

<400>  1
cctacacgac gctcttccga tct                                               23


<210>  2
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic oligonucleotide

<400>  2
agatcggaag agcgtcgtgt agg                                               23


<210>  3
<211>  35
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic oligonucleotide


<220>
<221>  misc_feature
<222>  (24)..(29)
<223>  N = A, C, T or G

<220>
<221>  misc_feature
<222>  (30)..(35)
<223>  N may be present or absent; N = A, C, T or G

<400>  3
cctacacgac gctcttccga tctnnnnnnn nnnnn                                  35


<210>  4
<211>  29
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic oligonucleotide


<220>
<221>  misc_feature
<222>  (24)..(29)
<223>  N = A, C, T or G

<400>  4
cctacacgac gctcttccga tctnnnnnn                                         29


<210>  5
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic oligonucleotide


<220>
<221>  misc_feature
<222>  (24)..(30)
<223>  N = A, C, T or G

<400>  5
cctacacgac gctcttccga tctnnnnnnn                                        30


<210>  6
<211>  31
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic oligonucleotide


<220>
<221>  misc_feature
<222>  (24)..(31)
<223>  N = A, C, T or G

<400>  6
cctacacgac gctcttccga tctnnnnnnn n                                      31


<210>  7
<211>  32
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic oligonucleotide


<220>
<221>  misc_feature
<222>  (24)..(32)
<223>  N = A, C, T or G

<400>  7
cctacacgac gctcttccga tctnnnnnnn nn                                     32


<210>  8
<211>  33
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic oligonucleotide


<220>
<221>  misc_feature
<222>  (24)..(33)
<223>  N = A, C, T or G

<400>  8
cctacacgac gctcttccga tctnnnnnnn nnn                                    33


<210>  9
<211>  34
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic oligonucleotide


<220>
<221>  misc_feature
<222>  (24)..(34)
<223>  N = A, C, T or G

<400>  9
cctacacgac gctcttccga tctnnnnnnn nnnn                                   34


<210>  10
<211>  35
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic oligonucleotide


<220>
<221>  misc_feature
<222>  (24)..(35)
<223>  N = A, C, T or G

<400>  10
cctacacgac gctcttccga tctnnnnnnn nnnnn                                  35


<210>  11
<211>  40
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic oligonucleotide


<220>
<221>  modified_base
<222>  (1)..(1)
<223>  A is biotinylated

<400>  11
acaggacatt cgtcgcttcc tttttttttt tttttttttt                             40


<210>  12
<211>  54
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic oligonucleotide

<400>  12
gtgactggag ttcagacgtg tgctcttccg atcttttttt tttttttttt tttv             54


<210>  13
<211>  42
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic oligonucleotide


<220>
<221>  misc_feature
<222>  (35)..(42)
<223>  N = A, C, T or G

<400>  13
gtgactggag ttcagacgtg tgctcttccg atctnnnnnn nn                          42


<210>  14
<211>  64
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic oligonucleotide


<220>
<221>  misc_feature
<222>  (25)..(32)
<223>  N = A, C, T or G

<400>  14
caagcagaag acggcatacg agatnnnnnn nngtgactgg agttcagacg tgtgctcttc       60

cgat                                                                    64


<210>  15
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic oligonucleotide

<400>  15
aatgatacgg cgaccaccga gatctacact ctttccctac acgacgctct tccgatct         58


<210>  16
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic oligonucleotide

<400>  16
aatgatacgg cgaccaccga                                                   20


<210>  17
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic oligonucleotide

<400>  17
caagcagaag acggcatacg a                                                 21


<210>  18
<211>  15
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic oligonucleotide

<400>  18
aaaaaaaaaa aaaaa                                                        15


<210>  19
<211>  18
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic oligonucleotide

<400>  19
tttttttttt tttttttv                                                     18


<210>  20
<211>  8
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic oligonucleotide


<220>
<221>  misc_feature
<222>  (1)..(8)
<223>  N = A, C, T or G

<400>  20
nnnnnnnn                                                                 8


<210>  21
<211>  8
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic oligonucleotide


<220>
<221>  misc_feature
<222>  (1)..(8)
<223>  N = A, C, T or G

<400>  21
nnnnnnnn                                                                 8


<210>  22
<211>  10
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic oligonucleotide

<400>  22
ttgatatggg                                                              10


<210>  23
<211>  10
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic oligonucleotide

<400>  23
ttgtgctggg                                                              10


<210>  24
<211>  10
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic oligonucleotide

<400>  24
tacactaggg                                                              10


<210>  25
<211>  10
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic oligonucleotide

<400>  25
tctgcctggg                                                              10


<210>  26
<211>  10
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic oligonucleotide

<400>  26
tcaattaggg                                                              10


<210>  27
<211>  10
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic oligonucleotide

<400>  27
tctctctggg                                                              10


<210>  28
<211>  10
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic oligonucleotide

<400>  28
tgatactggg                                                              10


<210>  29
<211>  10
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic oligonucleotide

<400>  29
tgccataggg                                                              10


<210>  30
<211>  10
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic oligonucleotide

<400>  30
tgtcaatggg                                                              10


