                               SEQUENCE LISTING

<110> QUEST DIAGNOSTICS INVESTMENTS INCORPORATED
 
<120> ASSAY FOR DETECTION OF PATHOGENIC LEPTOSPIRA STRAINS

<130> 034827-0794

<140> PCT/US2016/025817
<141> 2016-04-04

<150> 62/142,723
<151> 2015-04-03

<160> 13    

<170> PatentIn version 3.5

<210> 1
<211> 23
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      primer

<400> 1
agtaacacgt gggtaatctt cct                                               23


<210> 2
<211> 20
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      primer

<400> 2
tctctcggga ccatccagta                                                   20


<210> 3
<211> 25
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      probe


<220>
<223> 5' Optional 6-FAM

<220>
<223> 3' Optional BHQ-1

<400> 3
tgggataact ttccgaaagg gaagc                                             25


<210> 4
<211> 1321
<212> DNA
<213> Leptospira sp.

<400> 4
aactaacgct ggcggcgcgt cttaaacatg caagtcaagc ggagtagcaa tactcagcgg       60

cgaacgggtg agtaacacgt gggtaatctt cctccgagtc tgggataact ttccgaaagg      120

ggagctaata ctggatggtc ccgagagagg tcatatgatt tttcgggtaa agatttattg      180

ctcggagctg agcccgcgcc cgattagcta gttggtgagg taatggctca ccaaggcgac      240

gatcggtagc cggcctgaga gggtgttcgg ccacaatgga actgagacac ggtccatact      300

cctacgggag gcagcagtta agaatcttgc tcaatggggg gaaccctgaa gcagcgacgc      360

cgcgtgaacg atgaaggtct tcggattgta aagttcaata agcagggaaa aataagcagc      420

gatgtgatga tggtacctgc ctaaagcacc ggctaactac gtgccagcag ccgcggtaat      480

acgtatggtg caagcgttgt tcggaatcat tgggcgtaaa gggtgcgtag gcggacatgt      540

aagtcaggtg tgaaaactgc gggctcaact cgcagcctgc acttgaaact atgtgtctgg      600

agtttgggag aggcaagtgg aattccaggt gtagcggtga aatgcgtaga tatctggagg      660

aacaccagtg gcgaaggcga cttgctggcc taaaactgac gctgaggcac gaaagcgtgg      720

gtagtgaacg ggattagata ccccggtaat ccacgcccta aacgttgtct accagttgtt      780

gggggtttta accctcagta acgaacctaa cggattaagt agaccgcctg gggactatgc      840

tcgcaagagt gaaactcaaa ggaattgacg ggggtccgca caagcggtgg agcatgtggt      900

ttaattcgat gatacgcgaa aaacctcacc taggcttgac atggagtgga attatgtaga      960

gatacatgag ccttcgggcc gcttcacagg tgctgcatgg ttgtcgtcag ctcgtgtcgt     1020

gagatgttgg gttaagtccc gcaacgagcg caaccctcac cttatgttgc catcatttag     1080

ttgggcactc gtaaggaact gccggtgaca aaccggagga aggcggggat gacgtcaaat     1140

cctcatggcc tttatgtcta gggcaacaca cgtgctacaa tggccggtac aaagggtagc     1200

caactcgcga gggggagcta atctcaaaaa gccggtccca gttcggattg gagtctgcaa     1260

ctcgactcca tgaagtcgga atcgctagta atcgcggatc agcatgccgc ggtgaatacg     1320

t                                                                     1321


<210> 5
<211> 192
<212> DNA
<213> Leptospira sp.

<400> 5
aactaacgct ggcggcgcgt cttaaacatg caagtcaagc ggagtagcaa tactcagcgg       60

cgaacgggtg agtaacacgt gggtaatctt cctccgagtc tgggataact ttccgaaagg      120

ggagctaata ctggatggtc ccgagagagg tcatatgatt tttcgggtaa agatttattg      180

ctcggagctg ag                                                          192


<210> 6
<211> 1059
<212> DNA
<213> Leptospira sp.

<400> 6
gtgttcggcc acaatggaac tgagacacgg tccatactcc tacgggaggc agcagttaag       60

aatcttgctc aatgggggga accctgaagc agcgacgccg cgtgaacgat gaaggtcttc      120

ggattgtaaa gttcaataag cagggaaaaa taagcagcga tgtgatgatg gtacctgcct      180

aaagcaccgg ctaactacgt gccagcagcc gcggtaatac gtatggtgca agcgttgttc      240

ggaatcattg ggcgtaaagg gtgcgtaggc ggacatgtaa gtcaggtgtg aaaactgcgg      300

gctcaactcg cagcctgcac ttgaaactat gtgtctggag tttgggagag gcaagtggaa      360

ttccaggtgt agcggtgaaa tgcgtagata tctggaggaa caccagtggc gaaggcgact      420

tgctggccta aaactgacgc tgaggcacga aagcgtgggt agtgaacggg attagatacc      480

ccggtaatcc acgccctaaa cgttgtctac cagttgttgg gggttttaac cctcagtaac      540

gaacctaacg gattaagtag accgcctggg gactatgctc gcaagagtga aactcaaagg      600

aattgacggg ggtccgcaca agcggtggag catgtggttt aattcgatga tacgcgaaaa      660

acctcaccta ggcttgacat ggagtggaat tatgtagaga tacatgagcc ttcgggccgc      720

ttcacaggtg ctgcatggtt gtcgtcagct cgtgtcgtga gatgttgggt taagtcccgc      780

aacgagcgca accctcacct tatgttgcca tcatttagtt gggcactcgt aaggaactgc      840

cggtgacaaa ccggaggaag gcggggatga cgtcaaatcc tcatggcctt tatgtctagg      900

gcaacacacg tgctacaatg gccggtacaa agggtagcca actcgcgagg gggagctaat      960

ctcaaaaagc cggtcccagt tcggattgga gtctgcaact cgactccatg aagtcggaat     1020

cgctagtaat cgcggatcag catgccgcgg tgaatacgt                            1059


<210> 7
<211> 21
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      primer

<400> 7
cacgtgggta atcttcctct g                                                 21


<210> 8
<211> 15
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      primer

<400> 8
cccgcgtccg attag                                                        15


<210> 9
<211> 18
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      primer

<400> 9
tccattgtgg ccgracac                                                     18


<210> 10
<211> 24
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      probe

<400> 10
ctcaccaagg cgacgatcgg tagc                                              24


<210> 11
<211> 1320
<212> DNA
<213> Leptospira sp.

<400> 11
aactaacgct ggcggcgcgt cttaaacatg caagtcaagc ggagtagcaa tactcagcgg       60

cgaacgggtg agtaacacgt gggtaatctt cctctgagtc tgggataact ttccgaaagg      120

gaagctaata ctggatggtc ccgagagatc ataagatttt tcgggtaaag atttattgct      180

cggagatgag cccgcgtccg attagctagt tggtgaggta aaggctcacc aaggcgacga      240

tcggtagccg gcctgagagg gtgttcggcc acaatggaac tgagacacgg tccatactcc      300

tacgggaggc agcagttaag aatcttgctc aatgggggga accctgaagc agcgacgccg      360

cgtgaacgat gaaggtcttc ggattgtaaa gttcagtaag cagggaaaaa taagcagcaa      420

tgtgatgatg gtacctgcct aaagcaccgg ctaactacgt gccagcagcc gcggtaatac      480

gtatggtgca agcgttgttc ggaatcattg ggcgtaaagg gtgcgtaggc ggacatgtaa      540

gtcaggtgtg aaaactgcgg gctcaactcg cagcctgcac ttgaaactat gtgtctggag      600

tttgggagag gcaagtggaa ttccaggtgt agcggtgaaa tgcgtagata tctggaggaa      660

caccagtggc gaaggcgact tgctggccta aaactgacgc tgaggcacga aagcgtgggt      720

agtgaacggg attagatacc ccggtaatcc acgccctaaa cgttgtctac cagttgttgg      780

ggggttttaa ccctcagtaa cgaacctaac ggattaagta gaccgcctgg ggactatgct      840

cgcaagagtg aaactcaaag gaattgacgg gggtccgcac aagcggtgga gcatgtggtt      900

taattcgatg atacgcgaaa aacctcacct aggcttgaca tggagtggaa tcatgtagag      960

atacatgagc cttcgggccg cttcacaggt gctgcatggt tgtcgtcagc tcgtgtcgtg     1020

agatgttggg ttaagtcccg caacgagcgc aaccctcacc ttatgttgcc atcattcagt     1080

tgggcactcg taaggaactg ccggtgacaa accggaggaa ggcggggatg acgtcaaatc     1140

ctcatggcct ttatgtctag ggcaacacac gtgctacaat ggccggtaca aagggtagcc     1200

aactcgcgag ggggagctaa tctcaaaaat ccggtcccag ttcggattgg agtctgcaac     1260

tcgactccat gaagtcggaa tcgctagtaa tcgcggatca gcatgccgcg gtgaatacgt     1320


<210> 12
<211> 190
<212> DNA
<213> Leptospira sp.

<400> 12
aactaacgct ggcggcgcgt cttaaacatg caagtcaagc ggagtagcaa tactcagcgg       60

cgaacgggtg agtaacacgt gggtaatctt cctctgagtc tgggataact ttccgaaagg      120

gaagctaata ctggatggtc ccgagagatc ataagatttt tcgggtaaag atttattgct      180

cggagatgag                                                             190


<210> 13
<211> 1060
<212> DNA
<213> Leptospira sp.

<400> 13
gtgttcggcc acaatggaac tgagacacgg tccatactcc tacgggaggc agcagttaag       60

aatcttgctc aatgggggga accctgaagc agcgacgccg cgtgaacgat gaaggtcttc      120

ggattgtaaa gttcagtaag cagggaaaaa taagcagcaa tgtgatgatg gtacctgcct      180

aaagcaccgg ctaactacgt gccagcagcc gcggtaatac gtatggtgca agcgttgttc      240

ggaatcattg ggcgtaaagg gtgcgtaggc ggacatgtaa gtcaggtgtg aaaactgcgg      300

gctcaactcg cagcctgcac ttgaaactat gtgtctggag tttgggagag gcaagtggaa      360

ttccaggtgt agcggtgaaa tgcgtagata tctggaggaa caccagtggc gaaggcgact      420

tgctggccta aaactgacgc tgaggcacga aagcgtgggt agtgaacggg attagatacc      480

ccggtaatcc acgccctaaa cgttgtctac cagttgttgg ggggttttaa ccctcagtaa      540

cgaacctaac ggattaagta gaccgcctgg ggactatgct cgcaagagtg aaactcaaag      600

gaattgacgg gggtccgcac aagcggtgga gcatgtggtt taattcgatg atacgcgaaa      660

aacctcacct aggcttgaca tggagtggaa tcatgtagag atacatgagc cttcgggccg      720

cttcacaggt gctgcatggt tgtcgtcagc tcgtgtcgtg agatgttggg ttaagtcccg      780

caacgagcgc aaccctcacc ttatgttgcc atcattcagt tgggcactcg taaggaactg      840

ccggtgacaa accggaggaa ggcggggatg acgtcaaatc ctcatggcct ttatgtctag      900

ggcaacacac gtgctacaat ggccggtaca aagggtagcc aactcgcgag ggggagctaa      960

tctcaaaaat ccggtcccag ttcggattgg agtctgcaac tcgactccat gaagtcggaa     1020

tcgctagtaa tcgcggatca gcatgccgcg gtgaatacgt                           1060


