                         SEQUENCE LISTING

<110>  LIU, Xinyao
       ROWE, Duncan
 
<120>  METHODS AND COMPOSITIONS FOR HIGH-EFFICIENCY PRODUCTION 
       OF BIOFUEL AND/OR BIOMASS

<130>  SABA.P0065WO

<140>  UNKNOWN
<141>  2015-11-30

<150>  62/108,917
<151>  2015-01-28

<150>  62/258,785
<151>  2015-11-23

<160>  17    

<170>  PatentIn version 3.5

<210>  1
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  1
agtacgtatt gacaattaat catccggctc gtataatatt aaagaggaga aacatatg         58


<210>  2
<211>  47
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  2
taatggatcc aagatctcga attctaagct tcgatatcga ctagtag                     47


<210>  3
<211>  28
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  3
agcgatgcga atattcatgc cgactaac                                          28


<210>  4
<211>  43
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  4
gatgattaat tgtcaaatcg atgccgaaat catggctaca atc                         43


<210>  5
<211>  43
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  5
gattgtagcc atgatttcgg catcgatttg acaattaatc atc                         43


<210>  6
<211>  49
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  6
agattttgag acacaacgtg gctttactag tcgatatcga agcttagaa                   49


<210>  7
<211>  49
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  7
ttctaagctt cgatatcgac tagtaaagcc acgttgtgtc tcaaaatct                   49


<210>  8
<211>  44
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  8
aatttgatcg atgtagggac tgctgattag aaaaactcat cgag                        44


<210>  9
<211>  44
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  9
ctcgatgagt ttttctaatc agcagtccct acatcgatca aatt                        44


<210>  10
<211>  33
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  10
ggagttggat attttccatt tgttgagcga cct                                    33


<210>  11
<211>  29
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  11
gtcttcgtca ggaaatgttg atggcgatc                                         29


<210>  12
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  12
gggcttcgag gttcggcaca attaa                                             25


<210>  13
<211>  1809
<212>  DNA
<213>  Aquifex pyrophilus

<400>  13
atatcgattt gacaattaat catccggctc gtataatatt aaagaggaga aacatatggt       60

gattacccga aatttgaaac acatctccgg gaacaccgaa aggatcatta aattatcctc      120

tgaggaatat ctcttgattg gtgaatatac tcttcaggac atcaaaacct ttaagaccct      180

cgaaaacgta atttatatcg cgttgcccat gaaatacagt cccctgctcg ataaagtggc      240

gctttacacc cggctaacgg acttaatgca ggatacgaac ctgagcgaat ataaagggcg      300

gggtgtgatc atcggtattg cggattccgg tattgattac acccacccgg cattccgtgg      360

ccgtattctg gaaattcacg acctgaccac tggcgaggtt tgctacaaag aagaaattga      420

gaaagggaac tgcaaccaac gcgacaccga cggccacggt acccatgtgg cagggatcgc      480

ggctggtgac catgaggtct atcgtggaat tgctcccgaa gcggaactga ttgtcgtgaa      540

aatcggcaat gaagaatttc gtgaagacaa aattattgaa gctctcgaca tcctagccaa      600

acgtattaaa gcttatggta aacccggcgt tatcaacctc agcctaggca ctcccctggg      660

tccccatgac ggcaccgatc caatttcccg gttcattgag tccattgtaa acacctataa      720

aattcccgtc gttgtggctg ccggcaactg gggcaatgag cccattcacg ataaattgaa      780

cttgttccag gagaatacct ccagcttcga tgttattggc tcctgggcct acgtggacat      840

ttggattatg ggaaccgata gtgtggaact gaccatcaat tccccttgtc aagcggtgtc      900

cattcgggaa ggcgatacca aattgatcga cctaggcaac tgtggcactc tggccgttag      960

ttttagcggt cgcaaccctc ttaacggtga taaaaacgta ttcattaaaa tcgacaacgt     1020

gaatgagaac tttcggaacg ggtggagtgt ctcctttact cccattgatg tgaaagacgg     1080

tgaagtgcac ctgtggggtg aaaatgtagc ttttgcgagc cccgactaca gctataccat     1140

cagcagctta gctagctcca gctccgtcat cagcgtgggg tctttcacca gcaaggtcaa     1200

cgtcaacatt aatccctact cgatcttggg gagcatttcg aatttctcct cgattggccc     1260

tagccggcgg tgttcctacg gttgtaaaga gaacttgaaa cccgacatcg tagcacccgg     1320

ggagttggtg tgctccgcgt accctctcaa cattaagccg ttgattgact tatgctttta     1380

cgaaggtttc aattggatgc aagggacctc tatgtctgcc cccgcagtga ccggtgctgt     1440

tgccttgttg ttgcaagttg agcatacctt gaccccctcc gaagtgaaag aaatccttat     1500

caataatgct tataaagact cctttaccac tcaaaaacct aacaatgttt acggtcacgg     1560

caagctggac atttacaagt ctgttagcag tttgttagaa gaacgggaag gtttttccga     1620

ccgcaatacc acggaacgtg aaaccctcaa tgtttcatct ggtggcggtg ggtgcaccag     1680

ccaagggcaa gtgtcaatca tctacttgat caccttcgcc ctctttttga aagtgattcg     1740

ttttttatac cgctttcttt tttaatggat ccaagatctc gaattctaag cttcgatatc     1800

gactagtag                                                             1809


<210>  14
<211>  1785
<212>  DNA
<213>  Unknown

<220>
<223>  Thermoanaerobacter tengcongensis

<400>  14
atatcgattt gacaattaat catccggctc gtataatatt aaagaggaga aacatatgaa       60

aaaacaccaa ttggctaaga ttctgctgtc ccttgcgttg atcattagcc tcatttcctt      120

aaatgagatt ttggttcaag cccaacccaa ccaaatcaac ctgccgatag acagccccag      180

taaaatctac ccatccctgc cccaaaaaat ctccatgcaa gactccaaca aaaataaaat      240

ttttgatgat ttggagcaac gacttctgaa taaacccgat tccgaggaat ttccagtaat      300

tattaccttt aacaagcccg tatccgatgc tgatatcttt actattgcta agaacattgg      360

caaattcaat atcaagcatc ggtacaaaat tatccccagc attgctgcca atctcaccaa      420

gagtcaaatc aacgttctat ccaaattgga aatcgtcaaa caaatcgagt acgatgaacc      480

cgtatatgca accttggata ccgccacgaa gtggttcggt attactaagg cccggtctga      540

cttcggagtt accggcaaga acattaccat tgccatcatt gacacaggta ttgatggcaa      600

ccacgttgat ctcagcggag gtaagattat cgggtggaaa gacttcatta acaataaaac      660

caccccttat gatgacaatg gtcacggtac tcacgtcgct agtatcgccg ctggtaccgg      720

cgctggtaac tctttttata aaggcgtggc ccctgatgcc ttgctcgttg ggattaaagt      780

cctcgatgca aatggttccg gcagcatgtc cactgttacc gcgggtattg attgggccgt      840

gcaaaataaa gatgtttatg gcatcaaagt gattaacctg tccttgggga cctccacgtc      900

cagcgacggg accgatagta cctccctagc cgttaaccgt gctgtggaca gcggcattgt      960

agtggttgtt gctgcgggta acagtgggcc cgcaaaatac actattggtt cccccggtgc     1020

ggcggaaaaa gcgatcaccg tggccgctat ggccgacgtt ggcgagctgg gtttcaactt     1080

agccagcttc agttcccgtg gacccaccgc cgatggccgg atcaaacccg atatcgccgc     1140

ccccggctat aacattaccg ctgccaaagc taattccgtg aatggctatg ttacctactc     1200

tgggacgtcc atggccactc ccttcgttgc gggtaccgtc gccttgatgc tcaacgccaa     1260

ccctaatctg acccccaacg atgccaagaa catcatcatg tccacggcca aaagttgggg     1320

ccctccctct aaaaacgtgg attatggtgc cggtcgtctg gacggatacg aagccattcg     1380

tgtggccggc aacttccgtg gtaataacat tgatgtgccc aaccactact acatttccgg     1440

ttacttaccc gggagccggt attccgacac ctggactttt aatgccacca atacttctta     1500

ccccattgcc attaccctca ttatccccga ctgggccaat tataatccgg attttgatat     1560

ttacttgtat gatcctagtg gaaccttaat taaatcctcc accggcacgc aacggcagga     1620

aaccatcact attttaccct cccaaaccgg cacttattat gttaaggttt attcttaccg     1680

tgggtccggc aactattttt tcgacctctc cgcgggtggt agcgaaccag ttaagtacta     1740

atggatccaa gatctcgaat tctaagcttc gatatcgact agtag                     1785


<210>  15
<211>  1188
<212>  DNA
<213>  Unknown

<220>
<223>  Thermoactinomyces

<400>  15
atatcgattt gacaattaat catccggctc gtataatatt aaagaggaga aacatatgtt       60

tgccgcttct cccgcgagca ccgacgacta tgtacccggc gaacttatcg tgaagttcaa      120

agatggcatt agtgctcaat ccacccaatc tattcatgcg caatatggtg ctaaatccat      180

tgaaaaaagt aaatacttgg gctttgaagt cgtgaaattc gatggttctg tcgaaaaaat      240

gattgaaaaa tataagaata accctaacgt agaatatgtg gaacccaacc attatgtaca      300

tattatgtgg acccccaacg atttaaccag ccgtcaatgg ggtccccaaa aagtgcaggc      360

gccacaggca tgggacgtaa ctcgaagctc ctcctctacc gtcattgcga ttgtagatac      420

cggtgtccag accaatcatc ccgacctaca aggcaaaatt gtgcagggat atgattttgt      480

ggataatgat agcaacccac aagacggaaa tggtcatggc actcactgtg caggaattgc      540

ggctgccgtt accaacaatg ggaccgggat cgccggcatg gcccccaatg cctccatcat      600

gcccgtacgc gttttgaaca acagcggtag tggtactatg gccgccgtcg ccaatggaat      660

tgcctacgcg gcccaaaacg gtgccgacgt tatttccttg tccctaggtg gtacctccgg      720

ttccagcgcc ttgcaaagcg ctgtgcaaca agcctggaac tctggcgccg tagtggtcgc      780

cgccgctggg aattcctcca gtagtacccc caattatccc gcgtattatt ctcaagctat      840

cgcagtagcg tccaccgata gcaatgattc tttatcctat ttctccaatt acggttcctg      900

ggtggatgtt gccgcccccg gttctaatat ctattccacg tatctcaact cctcctatgc      960

tagtctgtcc gggacttcaa tggccacacc ccacgtggct ggtctcgcgg ctctcctagc     1020

ttctcaagga cggagcaaca gtcaaattcg tgccgccatc gaaaacacgg ctgacaaaat     1080

ctctggcacc ggcacctact tccaacacgg tcgtatcaac gcttataagg ccgtgaacta     1140

ttaatggatc caagatctcg aattctaagc ttcgatatcg actagtag                  1188


<210>  16
<211>  1305
<212>  DNA
<213>  Unknown

<220>
<223>  Geobacillus stearothermophilus

<400>  16
atatcgattt gacaattaat catccggctc gtataatatt aaagaggaga aacatatgaa       60

atttaaagcc attgtgtccc tgagcctggc tgtgtccatg tccttgttcc cgtttctggt      120

agaagccgcc agcaacgacg gcgtggaatc cccaaaaacc gtaagtgaaa ttaatgtcag      180

tcacgaaaaa ggtgcttatg tccagggcga agttatcgtt cagttcaaag aacaggttaa      240

cgctgaagaa aaggcaaaag cgcttaaaga agttggtgct acggccgtgc ccgacaatga      300

ccgcgtgaaa tccaaattca acgtgttaaa ggtaggaaac gtggaagctg tggttaaagc      360

gctgaaccac aaccccctcg tggagtacgc cgaaccgaat tatttgttca atgccgcgtg      420

gacgcctaat gatacctatt atcagggcta ccaatacgga ccccagaata cctacaccgc      480

ttacgcctgg gacgtcacta agggctctag cggtcaggaa atcgcagtga ttgataccgg      540

cgttgactac acccaccctg acctggacgg caaagtaatt aagggatacg attttgtcga      600

caacgattat gatcccatgg atctcaacaa ccacgggacc cacgttgccg gcattgcggc      660

tgcggagact aataacgcga ccggaatcgc cggtatggca cccaatacgc ggatcttagc      720

ggtgcgggct cttgatcgca acggttccgg caccttgtcc gatattgccg acgcgatcat      780

ttatgcggcc gattctggcg ctgaagtgat caacctcagt ctggggtgcg attgccacac      840

cactacgttg gaaaatgctg ttaactatgc ttggaataaa ggttccgtgg tggtggctgc      900

cgccggcaat aacggttcca gcaccacctt tgaacccgcc tcctacgaga acgtaattgc      960

agtgggtgct gtggatcaat acgaccgcct cgcctccttt tcaaattacg gcacctgggt     1020

cgatgtggtc gctcctggtg tggatattgt gagtaccatt accggtaacc ggtatgccta     1080

tatgagcggg acctccatgg cgtctcctca cgtggccggt ctggctgctc tgctggcctc     1140

ccagggccgt aataacatcg aaattcgaca agccatcgaa caaactgctg ataaaattag     1200

tggcaccggt acctatttca aatatgggcg tatcaattcc tataacgccg tcacctacta     1260

atggatccaa gatctcgaat tctaagcttc gatatcgact agtag                     1305


<210>  17
<211>  2880
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  17
tctgatatcg tttttatttg ttaactgtta attgtccttg ttcaaggatg ctgtctttga       60

caacagatgt tttcttgcct ttgatgttca gcaggaagct tggcgcaaac gttgattgtt      120

tgtctgcgta gaatcctctg tttgtcatat agcttgtaat cacgacattg tttcctttcg      180

cttgaggtac agcgaagtgt gagtaagtaa aggttacatc gttaggatca agatccattt      240

ttaacacaag gccagttttg ttcagcggct tgtatgggcc agttaaagaa ttagaaacat      300

aaccaagcat gtaaatatcg ttagacgtaa tgccgtcaat cgtcattttt gatccgcggg      360

agtcagtgaa caggtaccat ttgccgttca ttttaaagac gttcgcgcgt tcaatttcat      420

ctgttactgt gttagatgca atcagcggtt tcatcacttt tttcagtgtg taatcatcgt      480

ttagctcaat cataccgaga gcgccgtttg ctaactcagc cgtgcgtttt ttatcgcttt      540

gcagaagttt ttgactttct tgacggaaga atgatgtgct tttgccatag tatgctttgt      600

taaataaaga ttcttcgcct tggtagccat cttcagttcc agtgtttgct tcaaatacta      660

agtatttgtg gcctttatct tctacgtagt gaggatctct cagcgtatgg ttgtcgcctg      720

agctgtagtt gccttcatcg atgaactgct gtacattttg atacgttttt ccgtcaccgt      780

caaagattga tttataatcc tctacaccgt tgatgttcaa agagctgtct gatgctgata      840

cgttaacttg tgcagttgtc agtgtttgtt tgccgtaatg tttaccggag aaatcagtgt      900

agaataaacg gatttttccg tcagatgtaa atgtggctga acctgaccat tcttgtgttt      960

ggtcttttag gatagaatca tttgcatcga atttgtcgct gtctttaaag acgcggccag     1020

cgtttttcca gctgtcaata gaagtttcgc cgactttttg atagaacatg taaatcgatg     1080

tgtcatccgc atttttagga tctccggcta atgcaaagac gatgtggtag ccgtgatagt     1140

ttgcgacagt gccgtcagcg ttttgtaatg gccagctgtc ccaaacctcc aggccttttg     1200

cagaagagat atttttaatt gtggacgaat cgaattcagg aacttgatat ttttcatttt     1260

tttgctgttc agggatttgc agcatatcat ggcgtgtaat atgggaaatg ccgtatgttt     1320

ccttatatgg cttttggttc gtttctttcg caaacgcttg agttgcgcct cctgccagca     1380

gtgcggtagt aaaggttaat actgttgctt gttttgcaaa ctttttgatg ttcatcgttc     1440

atgtctcctt ttttatgtac tgtgttagcg gtctgcttct tccagccctc ctgtttgaag     1500

atggcaagtt agttacgcac aataaaaaaa gacctaaaat atgtaagggg tgacgccaaa     1560

gtatacactt tgccctttac acattttagg tcttgcctgc tttatcagta acaaacccgc     1620

gcgatttact tttcgacctc attctattag actctcgttt ggattgcaac tggtctattt     1680

tcctcttttg tttgatagaa aatcataaaa ggatttgcag actacgggcc taaagaacta     1740

aaaaatctat ctgtttcttt tcattctctg tattttttat agtttctgtt gcatgggcat     1800

aaagttgcct ttttaatcac aattcagaaa atatcataat atctcatttc actaaataat     1860

agtgaacggc aggtatatgt gatgggttaa aaaggatcga tcctctagct agagtcgacc     1920

tgcatttaaa taaagccacg ttgtgtctca aaatctctga tgttacattg cacaagataa     1980

aaatatatca tcatgaacaa taaaactgtc tgcttacata aacagtaata caaggggtgt     2040

tatgagccat attcaacggg aaacgtcttg ctcgaggccg cgattaaatt ccaacatgga     2100

tgctgattta tatgggtata aatgggctcg cgataatgtc gggcaatcag gtgcgacaat     2160

ctatcgattg tatgggaagc ccgatgcgcc agagttgttt ctgaaacatg gcaaaggtag     2220

cgttgccaat gatgttacag atgagatggt cagactaaac tggctgacgg aatttatgcc     2280

tcttccgacc atcaagcatt ttatccgtac tcctgatgat gcatggttac tcaccactgc     2340

gatccccggg aaaacagcat tccaggtatt agaagaatat cctgattcag gtgaaaatat     2400

tgttgatgcg ctggcagtgt tcctgcgccg gttgcattcg attcctgttt gtaattgtcc     2460

ttttaacagc gatcgcgtat ttcgtctcgc tcaggcgcaa tcacgaatga ataacggttt     2520

ggttgatgcg agtgattttg atgacgagcg taatggctgg cctgttgaac aagtctggaa     2580

agaaatgcat aagcttttgc cattctcacc ggattcagtc gtcactcatg gtgatttctc     2640

acttgataac cttatttttg acgaggggaa attaataggt tgtattgatg ttggacgagt     2700

cggaatcgca gaccgatacc aggatcttgc catcctatgg aactgcctcg gtgagttttc     2760

tccttcatta cagaaacggc tttttcaaaa atatggtatt gataatcctg atatgaataa     2820

attgcagttt catttgatgc tcgatgagtt tttctaatca atttaaatga gatatctgca     2880


