                         SEQUENCE LISTING

<110>  Centre National de la Recherche Scientifique
 
<120>  GENETICALLY MODIFIED VIBRIO CHOLERAE STRAINS AND USES THEREOF

<130>  B1943PC00

<160>  40    

<170>  PatentIn version 3.5

<210>  1
<211>  273
<212>  DNA
<213>  artificial sequence

<220>
<223>  hupA (VC0273)

<400>  1
atgaacaaga cccaattgat cgactttatc gcagagaaag cggacctgac taaagtgcaa       60

gcgaaagcag ctcttgaagc gactctgggt gcggttgaag gtgctctgaa agacggcgac      120

caagtacaac tgattggttt tggtacattc aaagttaatc atcgttctgc tcgtactggc      180

cgtaatccaa agaccggtga agagatcaaa attgcggcag ctaacgttcc tgcattcgta      240

gcaggtaaag cgctgaaaga cgcgatcaag taa                                   273


<210>  2
<211>  274
<212>  DNA
<213>  artificial sequence

<220>
<223>  hupB (VC1919)


<220>
<221>  misc_feature
<222>  (1)..(1)
<223>  v is a, g or c

<400>  2
vgtgaataag acacaactag tagaacaaat tgcagcgaac gcagatatct ctaaagcctc       60

tgcaggtcgc gctcttgacg cattcatcga agcagtcagc ggcacactac aatcaggtga      120

ccaagtggca ctggttggtt ttggtacgtt cagcgtacgt actcgcgcag cgcgtactgg      180

tcgtaaccca aaaactggcg aagagatcaa aatcgctgaa gcgaaagtgc cttcattcaa      240

agcaggtaaa gctctgaaag acgcttgcaa ctaa                                  274


<210>  3
<211>  2172
<212>  DNA
<213>  artificial sequence

<220>
<223>  uvrD (VC0190)

<400>  3
atgatcgatc cctctctatt gctcgacggt ctcaacgata aacaacgcga agcggtggca       60

gcgccactgg aaaacttact gattttggcc ggtgctggca gtggtaaaac ccgcgtactg      120

gtgcaccgga ttgcgtggct gatgtcggtg gaagaagcct caccgttttc ggtgatggcg      180

gtgaccttta ccaacaaagc tgcagccgaa atgcgtggcc gaattgaaga gctgatgcat      240

ggcaccgcct ctggcatgtg gtgtggtact ttccacggta tttgccatcg tattctgcgc      300

gcccattatc tcgacgctaa gctgctggaa gattttcaga tcatcgacag tgacgatcag      360

cagcgtctgc tcaaacgcct catcaaagcg cacaatctgg atgataaaca gtggccggca      420

cgccaagtcg cgtggtggat caacaatcaa aaagatgaag gattgcgccc gacgcacatc      480

aacgcctttg atccggttac tcaaacttat ctcaagctgt acaccgctta ccaagaagcg      540

tgcgatcgcg ccggcttggt cgatttcgcc gaaattttgc tgcgcgccct agagcttctg      600

cgtggtaatc agcacattcg cgagcattat caggcgcgct ttaagcacat tttggtcgat      660

gaattccaag acaccaacgc gattcagtac gcgtggctac gtatgatggc gggtgctcag      720

tcgaacgtga tgatcgtggg tgacgatgac cagtcgattt acggctggcg tggcgcgcga      780

gtggaaaaca tcgaaaaatt tacccgcgaa ttcccgagcg tgaataccat tcgactggag      840

caaaactacc gctccaccaa aaccattttg gaagcctcaa atacactgat cgccaataat      900

agcgagcgga tgggcaagca gctatggact gacggtttgg tcggcgaacc catttcggtg      960

tactcggcgt ataacgagct cgatgaagca cgctttgtgg tcagcaaaat caaaggctgg     1020

caggagcagg gcggcacact gaccgattgc gcgatcttgt atcgcaacaa cgcccagtcg     1080

cgggtattgg aagaggcatt attgcaagcg agtttggcct accgcattta tggcgggatg     1140

cgctttttcg agcgccaaga gatcaaagat gcgctgagtt atctgcgttt gattaataac     1200

cgcaatgacg acaccgcctt tgagcgagtg attaatacgc cgccgcgcgg tttgggtgat     1260

aaaaccctag agaccattcg ctttgccgcg cgcgatcgtg gctgcacctt gtgggatgcc     1320

agtgtcggtc tgctcaatga ccaagtgctc actgggcgtg ctgcgagcgc gctgagccgc     1380

tttgttgaac tgatcaacgc cttggaagag gaaggcatcg acatgccgct gcatgtgctc     1440

acggaccacg cggtaaaaac ctctggtctg ctggagatgt atcagcaaga aaaaggcgaa     1500

aaatccaaag cgcggattga aaacttggaa gagctggtga cggcgacgcg ccagtttgaa     1560

aagccagaag aagcgcaaga gatgaccatg ctgaccgcat ttttgaccca tgcggcactg     1620

gaagccggtg aaggtcaagc cgatgagcat gatgatgcgg tacaactgat gaccttgcac     1680

agtgccaaag gattagagtt tccgctggtg tttatggtcg gtgtggaaga gggtatgttc     1740

ccgagccaaa tgtctgccga agaggcgggg cgtctcgaag aggagcgtcg cctgtgttac     1800

gtcggtatga cccgcgcgat gcaaaagctc tacatcacct acgcggaaat gcgccgtttg     1860

tacgggcaag ataagtatca caaaccctca cgctttattc gtgaactgcc agaaggctgt     1920

ttggatgaag tgcgcatgaa ggcgcaagtc agccgtccaa ccagtacagg gcgctttagc     1980

caaaccgtag tcaaagaaag ctttaacgaa accggtttta atttgggctc acgagtccgt     2040

cacccgaaat ttggtgaagg caccatcatt aactttgaag gcagtggccc gcaaagccga     2100

gtgcaagtgg cgtttaatgg cgaaggcatt aagtggttag tcacggctta cgcgagatta     2160

gagaaggtgt ag                                                         2172


<210>  4
<211>  339
<212>  DNA
<213>  Artificial sequence

<220>
<223>  N16961 rstR

<400>  4
atgaagataa aagaaaggct agccaaccaa agaaaggcaa ttaataagac tcaggcacaa       60

atggctgatg aaattggaat tagtctaaca tcgtacaaaa aatacgaatc tggggaaggt      120

ttgcctacaa tggaaaacct tgtgaagatc gcagatgctc tggagatctc aattgatgaa      180

ctatgcggaa gatgggccac agatgaaaat caagagctta tgctcaggtt aaaaaaaatc      240

caacagttag atgaagaaga gcaaaaagca ataagcatgg ttttagaaag tatgctgata      300

agacattcta ccaagagcat cttaaatcat ggtgcttag                             339


<210>  5
<211>  336
<212>  DNA
<213>  Artificial sequence

<220>
<223>  O395 rstR

<400>  5
atgtttagtt caaaaattag ggatttaaga gttgagagag atctaaacca agaagaagta       60

gcaaatggta tcggcgttgg aaaaaatacc tatttagctt atgaaaaagg cacacaatca      120

ccaaaactgg aaactgtaga aaaattagca aaattctatg gtgtaccaat agctgaactt      180

gtcagcgata gcgaaacaaa cattgacgaa aagctgaaat cgaaaatccg aatgattgaa      240

tcacttgatg aaccagaaaa agagtcatta ttcattttga tggaggcttt gctgatgaga      300

agtaagagtc gagaaataca aaaagaattt aggtag                                336


<210>  6
<211>  28
<212>  DNA
<213>  Artificial sequence

<220>
<223>  attRS

<400>  6
agtgcgtatt atgtatgtta tgttaaat                                          28


<210>  7
<211>  1080
<212>  DNA
<213>  Artificial sequence

<220>
<223>  rstA

<400>  7
atgaaaaagc agattttcac tcttgacgaa ttacaactcg atacaaacgc ttctccgttt       60

gtttttgtcg attatcttgc ttggtcggtt ccttatgctt cattccgtca cgcgcataag      120

tccgatttgt cctcgcttat ctgggcgcct cttcctaagc ccgattaccg tatggctcgc      180

acccctgagc aaaaagagaa gttaatcgag ctttataagc agaagtggaa cgttgccatg      240

atggaacgct tggaggtgtt ttgccttcat gttcttggtc ttcgtatgtc gccttggcgc      300

gataaggggc tttatgggta tgaaaactca tgccatttga tgtcgaagta ctccaataaa      360

cacgtgggct ttgttgcgct agggggaaac cgtaatacct gttacttcca aattgaggga      420

gtagggtgtc gaaccgtgtt agagcacacc tctttattcc gtcttcattg gtggctcgat      480

ttattaggtt gctctcgtct gtctcgtatt gatttggccg ttgatgactt tcacggttta      540

tttggccgtg agtacgccaa aaaagcctat tccgatgatg cctttcgcac cgctagagcg      600

ggacgtgctc ctaacggtgg tgagcgatta gtctctgagc ctaatggcaa aatcatcaat      660

gaatctttcg aggtaggctc tcgtgaatct cgcatttact ggcgtatcta caacaaggct      720

gctcagcttg gtttagatat gcactggttt cgtaatgagg tcgagcttaa agacatgcct      780

atcgacgttc tgctcaatat cgaggggtat tttgcaggtt tgtgcgcgta ctcggcctca      840

attatcaatt ccttgcctgt caaggtggtc acaaaaaagc gtcaagtggc gcttgatatc      900

cactcacgca ttaagtgggc tcgtcgccag gttggtaaga ctttgtttga tatttcaaag      960

cattttggtg gtgatttgga aagggtgttt ggggcgttga tttctaagga aattcacgac     1020

gattcactca accttccaga ttcttatatg aagttaattg atgaaattat gggtgattaa     1080


<210>  8
<211>  375
<212>  DNA
<213>  Artificial sequence

<220>
<223>  rstB

<400>  8
ttgatgaaat tatgggtgat taatatgaaa tctcgttttg ttgtttttgg tgcctctcat       60

tctgaagggg tgagtaagac tggtgctcct taccttatcc cagtactttt tgttggtaag      120

ccgattcgcc agtggaaaaa cgataaaggc caatgtttga cgtttggctt gcagcatcag      180

gaagtgaagt ttgtatccag tgacgcgatg accagaaaac tcgaacagac cgcctttccg      240

gttcttgtca cgtttgacaa tgagccagac ccagaagacc catcacgcaa cctcgtgatt      300

gattatcaag tggtgtgttc cttgtttgac aacgtgccgg gcggcaagcc attggataag      360

cctaacaaaa tctag                                                       375


<210>  9
<211>  537
<212>  DNA
<213>  Artificial sequence

<220>
<223>  mshA

<400>  9
atggtaataa tgaaaagaca aggtggtttc accctaatcg aattggtcgt ggtgattgta       60

attctcggta tcttggccgt cacagcagcg ccacgtttct taaacctgca aggcgatgcg      120

cgagaagcgt ctttagaagg tcttcgaggt gcagttgctg gtgcaatggg tatctcatat      180

ggacgagctg caattaaagg cattgaaacg ttagactaca cagcatatac agatgcaaat      240

acacctggaa cagttattga tggcattgcc cataagtttg gttatccaac ggcagtaaat      300

gattcaacag caaatctagg tggtattatg caaacgctag atacttcgag tgagtttatt      360

gcgttgcaat cgtctacagg aacaaatagt aatcaagcta atttatggat tgacataggc      420

ttcaatggtt ataacgatct atgtgtccgt tatacagctg caacctctaa taatcctgca      480

acggttgcta tgcagactgg ggttgctgga actgcttgtg gtaaaccagc gcaataa         537


<210>  10
<211>  21
<212>  DNA
<213>  Artificial sequence

<220>
<223>  768

<400>  10
taaagtggcg cttacgcttg g                                                 21


<210>  11
<211>  21
<212>  DNA
<213>  Artificial sequence

<220>
<223>  769

<400>  11
gaagctgcgg tacagaagct c                                                 21


<210>  12
<211>  20
<212>  DNA
<213>  Artificial sequence

<220>
<223>  1269

<400>  12
gacattctac caagagcatc                                                   20


<210>  13
<211>  20
<212>  DNA
<213>  Artificial sequence

<220>
<223>  2247

<400>  13
ttgcgctttc agtccatcag                                                   20


<210>  14
<211>  20
<212>  DNA
<213>  Artificial sequence

<220>
<223>  2248

<400>  14
gtggtctgga gcgcgaaatc                                                   20


<210>  15
<211>  29
<212>  DNA
<213>  Artificial sequence

<220>
<223>  2251

<400>  15
cacggatccc gtcataactt gcgttactg                                         29


<210>  16
<211>  29
<212>  DNA
<213>  Artificial sequence

<220>
<223>  2252

<400>  16
cacgcatgca ctcggcaata ccgtattag                                         29


<210>  17
<211>  29
<212>  DNA
<213>  Artificial sequence

<220>
<223>  2249

<400>  17
cacctcgagt cactgtgatt cccctttgg                                         29


<210>  18
<211>  29
<212>  DNA
<213>  Artificial sequence

<220>
<223>  2250

<400>  18
cacagatctc tctgaaagac gcttgcaac                                         29


<210>  19
<211>  29
<212>  DNA
<213>  Artificial sequence

<220>
<223>  2253

<400>  19
cactctagat catttaggtt tcccttctc                                         29


<210>  20
<211>  29
<212>  DNA
<213>  Artificial sequence

<220>
<223>  2254

<400>  20
cacgtcgaca gacgcgatca agtaattgc                                         29


<210>  21
<211>  30
<212>  DNA
<213>  Artificial sequence

<220>
<223>  2425

<400>  21
tcacggtacc tgcgtggcag cttctatctc                                        30


<210>  22
<211>  30
<212>  DNA
<213>  Artificial sequence

<220>
<223>  2426

<400>  22
tcactctaga ttggctgctt accacgtctg                                        30


<210>  23
<211>  30
<212>  DNA
<213>  Artificial sequence

<220>
<223>  2427

<400>  23
tcacggatcc ttgagaccgt cgagcaatag                                        30


<210>  24
<211>  30
<212>  DNA
<213>  Artificial sequence

<220>
<223>  2441

<400>  24
tcacgaattc tcaaccggat tggcggtcac                                        30


<210>  25
<211>  30
<212>  DNA
<213>  Artificial sequence

<220>
<223>  2442

<400>  25
tcactctaga aacccacgac aaccggaatc                                        30


<210>  26
<211>  30
<212>  DNA
<213>  Artificial sequence

<220>
<223>  2443

<400>  26
tcacagatct ccgcttcatc ttgtcttggg                                        30


<210>  27
<211>  20
<212>  DNA
<213>  Artificial sequence

<220>
<223>  2690

<400>  27
accctactcc ctcaatttgg                                                   20


<210>  28
<211>  30
<212>  DNA
<213>  Artificial sequence

<220>
<223>  2444

<400>  28
tcacagatct caaaggccaa gcgcatatcg                                        30


<210>  29
<211>  29
<212>  DNA
<213>  Artificial sequence

<220>
<223>  2701

<400>  29
acaccatggc cagtggcgaa gtcatgatc                                         29


<210>  30
<211>  64
<212>  DNA
<213>  Artificial sequence

<220>
<223>  2702

<400>  30
cacgcatgcc ttacttactt gtcatcgtcg tccttgtagt ctctagacac cttctctaat       60

ctcg                                                                    64


<210>  31
<211>  20
<212>  DNA
<213>  Artificial sequence

<220>
<223>  2704

<400>  31
gtcttcgtat gtcgccttgg                                                   20


<210>  32
<211>  35
<212>  DNA
<213>  Artificial sequence

<220>
<223>  ARB1


<220>
<221>  misc_feature
<222>  (21)..(30)
<223>  n is a, c, g, or t

<400>  32
ggccacgcgt cgactagtac nnnnnnnnnn gatat                                  35


<210>  33
<211>  20
<212>  DNA
<213>  Artificial sequence

<220>
<223>  ARB2

<400>  33
ggccacgcgt cgactagtac                                                   20


<210>  34
<211>  35
<212>  DNA
<213>  Artificial sequence

<220>
<223>  ARB6


<220>
<221>  misc_feature
<222>  (21)..(30)
<223>  n is a, c, g, or t

<400>  34
ggccacgcgt cgactagtac nnnnnnnnnn acgcc                                  35


<210>  35
<211>  22
<212>  DNA
<213>  Artificial sequence

<220>
<223>  1314

<400>  35
gtcatcgtca tccttgtaat cg                                                22


<210>  36
<211>  29
<212>  DNA
<213>  Artificial sequence

<220>
<223>  846

<400>  36
aaatgatcac gagatagggt tgagtgttg                                         29


<210>  37
<211>  26
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Loop 2

<400>  37
gacccccgtc tagtattacg ggggta                                            26


<210>  38
<211>  16
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Ec uvrD

<400>  38
ctgtatatat acccag                                                       16


<210>  39
<211>  16
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Vc uvrD

<400>  39
atgtataaat aaaaag                                                       16


<210>  40
<211>  16
<212>  DNA
<213>  Artificial sequence

<220>
<223>  Vc uvrD mutated LexA binding site

<400>  40
aacaataaat aaaaag                                                       16


