                         SEQUENCE LISTING

<110>  The Broad Institute, Inc.
 
<120>  Method for In Situ Determination of Nucleic Acid Proximity

<130>  BROD-0225WP

<150>  US 62/085,851
<151>  2014-12-01

<160>  12    

<170>  PatentIn version 3.5

<210>  1
<211>  31
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide


<220>
<221>  N_region
<222>  (16)..(17)
<223>  "n" at position 16 represents any repeating or combination of 
       nucleotides running for a length of 120 residues

<220>
<221>  misc_feature
<222>  (16)..(16)
<223>  n is a, c, g, or t

<400>  1
tcgcgcccat aactcnctga gggtccgcct t                                      31


<210>  2
<211>  31
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide


<220>
<221>  N_region
<222>  (16)..(17)
<223>  "n" at position 16 represents any repeating or combination of 
       nucleotides running for a length of 120 residues

<220>
<221>  misc_feature
<222>  (16)..(16)
<223>  n is a, c, g, or t

<400>  2
atcgcaccag cgtgtncact gcggctcctc a                                      31


<210>  3
<211>  31
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide


<220>
<221>  N_region
<222>  (16)..(17)
<223>  "n" at position 16 represents any repeating or combination of 
       nucleotides running for a length of 120 residues

<220>
<221>  misc_feature
<222>  (16)..(16)
<223>  n is a, c, g, or t

<400>  3
cctcgcctat cccatncact accggggtct g                                      31


<210>  4
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic primer

<400>  4
ctgggatcgc gcccataact c                                                 21


<210>  5
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic primer

<400>  5
ctgggaatcg caccagcgtg t                                                 21


<210>  6
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  6
ctgggacctc gcctatccca t                                                 21


<210>  7
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic Primer

<400>  7
cgtggaaagg cggaccctca g                                                 21


<210>  8
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic primer

<400>  8
cgtggatgag gagccgcagt g                                                 21


<210>  9
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic primer

<400>  9
cgtggacaga ccccggtagt g                                                 21


<210>  10
<211>  41
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic primer

<400>  10
ggattctaat acgactcact atagggtcgc gcccataact c                           41


<210>  11
<211>  41
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic primer

<400>  11
ggattctaat acgactcact atagggatcg caccagcgtg t                           41


<210>  12
<211>  40
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic primer

<400>  12
ggattctaat acgactcact atagggcctc gcctatccca                             40


