                         SEQUENCE LISTING

<110>  The Regents of the University of California
       Zalatan, Jesse
       Qi, Lei
       Lim, Wendell
 
<120>  SCAFFOLD RNAS

<130>  0951841

<140>  PCT/US2015/053034
<141>  2015-09-29

<150>  US 62/057,120
<151>  2014-09-29

<160>  55    

<170>  PatentIn version 3.5

<210>  1
<211>  76
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic nucleotide sequence

<400>  1
gttttagagc tagaaatagc aagttaaaat aaggctagtc cgttatcaac ttgaaaaagt       60

ggcaccgagt cggtgc                                                       76


<210>  2
<211>  117
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  synthetic peptide construct

<400>  2

Met Ala Ser Asn Phe Thr Gln Phe Val Leu Val Asp Asn Gly Gly Thr 
1               5                   10                  15      


Gly Asp Val Thr Val Ala Pro Ser Asn Phe Ala Asn Gly Ile Ala Glu 
            20                  25                  30          


Trp Ile Ser Ser Asn Ser Arg Ser Gln Ala Tyr Lys Val Thr Cys Ser 
        35                  40                  45              


Val Arg Gln Ser Ser Ala Gln Asn Arg Lys Tyr Thr Ile Lys Val Glu 
    50                  55                  60                  


Val Pro Lys Gly Ala Trp Arg Ser Tyr Leu Asn Met Glu Leu Thr Ile 
65                  70                  75                  80  


Pro Ile Phe Ala Thr Asn Ser Asp Cys Glu Leu Ile Val Lys Ala Met 
                85                  90                  95      


Gln Gly Leu Leu Lys Asp Gly Asn Pro Ile Pro Ser Ala Ile Ala Ala 
            100                 105                 110         


Asn Ser Gly Ile Tyr 
        115         


<210>  3
<211>  122
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  synthetic peptide construct

<400>  3

Met Ser Lys Thr Ile Val Leu Ser Val Gly Glu Ala Thr Arg Thr Leu 
1               5                   10                  15      


Thr Glu Ile Gln Ser Thr Ala Asp Arg Gln Ile Phe Glu Glu Lys Val 
            20                  25                  30          


Gly Pro Leu Val Gly Arg Leu Arg Leu Thr Ala Ser Leu Arg Gln Asn 
        35                  40                  45              


Gly Ala Lys Thr Ala Tyr Arg Val Asn Leu Lys Leu Asp Gln Ala Asp 
    50                  55                  60                  


Val Val Asp Ser Gly Leu Pro Lys Val Arg Tyr Thr Gln Val Trp Ser 
65                  70                  75                  80  


His Asp Val Thr Ile Val Ala Asn Ser Thr Glu Ala Ser Arg Lys Ser 
                85                  90                  95      


Leu Tyr Asp Leu Thr Lys Ser Leu Val Ala Thr Ser Gln Val Glu Asp 
            100                 105                 110         


Leu Val Val Asn Leu Val Pro Leu Gly Arg 
        115                 120         


<210>  4
<211>  62
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  synthetic peptide construct

<400>  4

Met Lys Ser Ile Arg Cys Lys Asn Cys Asn Lys Leu Leu Phe Lys Ala 
1               5                   10                  15      


Asp Ser Phe Asp His Ile Glu Ile Arg Cys Pro Arg Cys Lys Arg His 
            20                  25                  30          


Ile Ile Met Leu Asn Ala Cys Glu His Pro Thr Glu Lys His Cys Gly 
        35                  40                  45              


Lys Arg Glu Lys Ile Thr His Ser Asp Glu Thr Val Arg Tyr 
    50                  55                  60          


<210>  5
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic nucleotide sequence

<400>  5
gcgcacatga ggatcaccca tgtgc                                             25


<210>  6
<211>  14
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic nucleotide sequence

<400>  6
ccacagtcac tggg                                                         14


<210>  7
<211>  31
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic nucleotide sequence

<400>  7
aacataagga gtttatatgg aaacccttat g                                      31


<210>  8
<211>  19
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic nucleotide sequence

<400>  8
ctgaatgcct gcgagcatc                                                    19


<210>  9
<211>  67
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic nucleotide sequence

<400>  9
gggagcacat gaggatcacc catgtgccac gagcgacatg aggatcaccc atgtcgctcg       60

tgttccc                                                                 67


<210>  10
<211>  56
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic nucleotide sequence

<400>  10
gggagcacat gaggatcacc catgtgcgac tcccacagtc actggggagt cttccc           56


<210>  11
<211>  79
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic nucleotide sequence

<400>  11
gggagctaag gagtttatat ggaaaccctt agcctgctgc gtaaggagtt tatatggaaa       60

cccttacgca gcagttccc                                                    79


<210>  12
<211>  69
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic nucleotide sequence

<400>  12
gggagcacat gaggatcacc catgtgccac gagtaaggag tttatatgga aacccttact       60

cgtgttccc                                                               69


<210>  13
<211>  86
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic nucleotide sequence

<400>  13
gtttaagagc tatgctggaa acagcatagc aagtttaaat aaggctagtc cgttatcaac       60

ttgaaaaagt ggcaccgagt cggtgc                                            86


<210>  14
<211>  7
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic nucleotide sequence

<400>  14
ttttttt                                                                  7


<210>  15
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic nucleotide sequence

<400>  15
tttttttgtt ttttatgtct                                                   20


<210>  16
<211>  266
<212>  PRT
<213>  Homo sapiens

<400>  16

Met Pro Lys Gly Lys Lys Ala Lys Gly Lys Lys Val Ala Pro Ala Pro 
1               5                   10                  15      


Ala Val Val Lys Lys Gln Glu Ala Lys Lys Val Val Asn Pro Leu Phe 
            20                  25                  30          


Glu Lys Arg Pro Lys Asn Phe Gly Ile Gly Gln Asp Ile Gln Pro Lys 
        35                  40                  45              


Arg Asp Leu Thr Arg Phe Val Lys Trp Pro Arg Tyr Ile Arg Leu Gln 
    50                  55                  60                  


Arg Gln Arg Ala Ile Leu Tyr Lys Arg Leu Lys Val Pro Pro Ala Ile 
65                  70                  75                  80  


Asn Gln Phe Thr Gln Ala Leu Asp Arg Gln Thr Ala Thr Gln Leu Leu 
                85                  90                  95      


Lys Leu Ala His Lys Tyr Arg Pro Glu Thr Lys Gln Glu Lys Lys Gln 
            100                 105                 110         


Arg Leu Leu Ala Arg Ala Glu Lys Lys Ala Ala Gly Lys Gly Asp Val 
        115                 120                 125             


Pro Thr Lys Arg Pro Pro Val Leu Arg Ala Gly Val Asn Thr Val Thr 
    130                 135                 140                 


Thr Leu Val Glu Asn Lys Lys Ala Gln Leu Val Val Ile Ala His Asp 
145                 150                 155                 160 


Val Asp Pro Ile Glu Leu Val Val Phe Leu Pro Ala Leu Cys Arg Lys 
                165                 170                 175     


Met Gly Val Pro Tyr Cys Ile Ile Lys Gly Lys Ala Arg Leu Gly Arg 
            180                 185                 190         


Leu Val His Arg Lys Thr Cys Thr Thr Val Ala Phe Thr Gln Val Asn 
        195                 200                 205             


Ser Glu Asp Lys Gly Ala Leu Ala Lys Leu Val Glu Ala Ile Arg Thr 
    210                 215                 220                 


Asn Tyr Asn Asp Arg Tyr Asp Glu Ile Arg Arg His Trp Gly Gly Asn 
225                 230                 235                 240 


Val Leu Gly Pro Lys Ser Val Ala Arg Ile Ala Lys Leu Glu Lys Ala 
                245                 250                 255     


Lys Ala Lys Glu Leu Ala Thr Lys Leu Gly 
            260                 265     


<210>  17
<211>  49
<212>  PRT
<213>  Homo sapiens

<400>  17

Thr Arg Phe Val Lys Trp Pro Arg Tyr Ile Arg Leu Gln Arg Gln Arg 
1               5                   10                  15      


Ala Ile Leu Tyr Lys Arg Leu Lys Val Pro Pro Ala Ile Asn Gln Phe 
            20                  25                  30          


Thr Gln Ala Leu Asp Arg Gln Thr Ala Thr Gln Leu Leu Lys Leu Ala 
        35                  40                  45              


His 
    


<210>  18
<211>  61
<212>  PRT
<213>  Homo sapiens

<400>  18

Lys Tyr Arg Pro Glu Thr Lys Gln Glu Lys Lys Gln Arg Leu Leu Ala 
1               5                   10                  15      


Arg Ala Glu Lys Lys Ala Ala Gly Lys Gly Asp Val Pro Thr Lys Arg 
            20                  25                  30          


Pro Pro Val Leu Arg Ala Gly Val Asn Thr Val Thr Thr Leu Val Glu 
        35                  40                  45              


Asn Lys Lys Ala Gln Leu Val Val Ile Ala His Asp Val 
    50                  55                  60      


<210>  19
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic nucleotide sequence

<400>  19
gtacgttctc tatcactgat a                                                 21


<210>  20
<211>  27
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic nucleotide sequence

<400>  20
gcatacttct gcctgctggg gagcctg                                           27


<210>  21
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic nucleotide sequence

<400>  21
gaatagctca gaggccgagg                                                   20


<210>  22
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic nucleotide sequence

<400>  22
ggctaggaac gcgtctctct g                                                 21


<210>  23
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic nucleotide sequence

<400>  23
gcctgaagac aggtgggaag cgc                                               23


<210>  24
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic nucleotide sequence

<400>  24
gagccggaca ggacctccca g                                                 21


<210>  25
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic nucleotide sequence

<400>  25
gcgggtggtc ggtagtgagt c                                                 21


<210>  26
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic nucleotide sequence

<400>  26
ggaccctgct gtttgcgggt ggt                                               23


<210>  27
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic nucleotide sequence

<400>  27
gcagacgcga ggaaggaggg cgc                                               23


<210>  28
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic nucleotide sequence

<400>  28
gcaagtcact ccccttccct                                                   20


<210>  29
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic nucleotide sequence

<400>  29
gaattccatc cactttagca agga                                              24


<210>  30
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic nucleotide sequence

<400>  30
gcccgcgctt cccacctgtc ttc                                               23


<210>  31
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic nucleotide sequence

<400>  31
gcctctggga ggtcctgtcc ggctc                                             25


<210>  32
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic nucleotide sequence

<400>  32
acttttctct atcactgata                                                   20


<210>  33
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic nucleotide sequence

<400>  33
ttgatattta agttaataaa                                                   20


<210>  34
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic nucleotide sequence

<400>  34
atatatagag ttagagttta                                                   20


<210>  35
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic nucleotide sequence

<400>  35
catcgcatca acttaaacat                                                   20


<210>  36
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic nucleotide sequence

<400>  36
aagacggaaa aaagtagcta                                                   20


<210>  37
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic nucleotide sequence

<400>  37
ttagctactt ttttccgtct                                                   20


<210>  38
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic nucleotide sequence

<400>  38
tgaattgaat gctttgagtt                                                   20


<210>  39
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic nucleotide sequence

<400>  39
ttttaatctg gcttacagat                                                   20


<210>  40
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic nucleotide sequence

<400>  40
tttaaagtga ttaaaatatg                                                   20


<210>  41
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic nucleotide sequence

<400>  41
ttaatcactt taaaataaaa                                                   20


<210>  42
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic nucleotide sequence

<400>  42
tgagagaatg agagttttgt                                                   20


<210>  43
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic nucleotide sequence

<400>  43
atagcaccgt accataccct                                                   20


<210>  44
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic nucleotide sequence

<400>  44
atttcgagtt tccaagggta                                                   20


<210>  45
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic nucleotide sequence

<400>  45
aagcaaagga ggggaagcac                                                   20


<210>  46
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic nucleotide sequence

<400>  46
gtgctacgaa gtggtgtctg                                                   20


<210>  47
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic nucleotide sequence

<400>  47
cgcagggagg tctgggtgtg                                                   20


<210>  48
<211>  20
<212>  DNA
<213>  Artifical Sequence

<400>  48
acccagacct ccctgcgagc                                                   20


<210>  49
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic nucleotide sequence

<400>  49
ggagcaacgg gcaaccgttt                                                   20


<210>  50
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic nucleotide sequence

<400>  50
ttgataacgg actagcctta t                                                 21


<210>  51
<211>  119
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic nucleotide sequence

<400>  51
acttttctct atcactgata gttttagagc tagaaatagc aagttaaaat aaggctagtc       60

cgttatcaac ttgaaaaagt ggcaccgagt cggtggtgct ttttttgttt tttatgtct       119


<210>  52
<211>  141
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic nucleotide sequence

<400>  52
acttttctct atcactgata gttttagagc tagaaatagc aagttaaaat aaggctagtc       60

cgttatcaac ttgaaaaagt ggcaccgagt cggtgcgcgc acatgaggat cacccatgtg      120

ctttttttgt tttttatgtc t                                                141


<210>  53
<211>  114
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic nucleotide sequence

<400>  53
gtacgttctc tatcactgat agtttaagag ctatgctgga aacagcatag caagtttaaa       60

taaggctagt ccgttatcaa cttgaaaaag tggcaccgag tcggtgcttt tttt            114


<210>  54
<211>  152
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic nucleotide sequence

<400>  54
gtacgttctc tatcactgat agtttaagag ctatgctgga aacagcatag caagtttaaa       60

taaggctagt ccgttatcaa cttgaaaaag tggcaccgag tcggtgcgcg cacatgagga      120

tcacccatgt gctttttttg ttttttatgt ct                                    152


<210>  55
<211>  143
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic nucleotide sequence

<400>  55
acttttctct atcactgata gttttagagc tagaaatagc aagttaaaat aaggctagtc       60

cgttatcaac ttgaaaaagt ggcaccgagt cggtggtgct ttttttgttt tttatgtctc      120

tgcagagttc ggtaccagct ttt                                              143


