                         SEQUENCE LISTING

<110>  Veterinrinstituttet
 
<120>  New virus

<130>  PG20282PC00

<150>  SE1450669-5
<151>  2014-06-03

<150>  SE1451435-0
<151>  2014-11-27

<150>  NO20141438
<151>  2014-11-28

<160>  55    

<170>  PatentIn version 3.5

<210>  1
<211>  682
<212>  DNA
<213>  Artificial

<220>
<223>  Sequence in Virus Y segment L1

<400>  1
tgctggatga acagaatgtt aacttcctga ccatcgagtc caatccagct ctttcggctc       60

tgaagagtat catgtcgcat ttcatggaac atgggacata caaaccacca ttcttgaaaa      120

cttcacggga tatagttttc gcgctttatg aggataaacg accactgtcc agtcaaatcg      180

ctccattgat gattgattta gttaactacg cgatagttat ttactcttgt aacatttctc      240

gcttgatcag tgtccctacc tgaagacttg aaagacctgc aggcagagac gtgaagtata      300

tgacataatt agtaaaatta atttcattga cacatttctg attccatctt ctcttttcca      360

accacctcca cataaaagat attgggatgt cgacgtccgt cagcgagtgg ttcgggtgcc      420

taagtgtgca gttcctgatg atgtctacct ccctcacgct aatctcactg acgtgctgga      480

agtcaatgtt gaatcaattc acaaatatgg ccaattgcgg aaagagatac aagcagcagc      540

taaaagaatg gattcgactg ctagaatcgc agaaactttc tacaatcttt cagtatacca      600

agccaaccaa atcaaatttc cgttggagag attccttttg tgtttagtgg ttagttatgc      660

gcatgaattg tctccatccc ct                                               682


<210>  2
<211>  129
<212>  DNA
<213>  Artificial

<220>
<223>  Sequence in Virus Y segment L1

<400>  2
ctttatgagg ataaacgacc actgtccagt caaatcgctc cattgatgat tgatttagtt       60

ggcttggtat gctggaagtc aatgttgaat caattcacaa atatggccaa ttgcggaaag      120

agatacaag                                                              129


<210>  3
<211>  190
<212>  DNA
<213>  Artificial

<220>
<223>  Sequence in virus Y segment L1

<400>  3
ttggtgttgt gaagtatctg aagaatgaca ctcagcatta tgtggctcga aacctgcagg       60

caggcttact gcctgcaggt ccctgcaggt ttcgagccac ataatgctga gtgtcattct      120

tcagatcctg ttggtgttgt gaagtatctg aagaatgaca ctcagcatta tgtggctcga      180

aacctgcagg                                                             190


<210>  4
<211>  272
<212>  DNA
<213>  Artificial

<220>
<223>  Sequence in virus Y segment L1

<400>  4
tcatggcgtt agaattcaag tgcagagacg tagcagaacg ataatgcctt tcagtgtacc       60

acccttgtca agaaagtatt gactgacaag ggtgttacac taaagaattt ctcaaaatcg      120

ggtgcgaaga gttctactaa gatagtacag gctgcacaac tggctaacat ccctttcact      180

cagtatcaag acaccataat ggcaccagtg tctcatggcg ttagaattca agtgcagaga      240

cgtagcagaa cgataatgcc tttcagtgta cc                                    272


<210>  5
<211>  226
<212>  DNA
<213>  Artificial

<220>
<223>  Sequence in virus Y segment L1

<400>  5
ccagaaggaa aagtagtggt atgcagaaca tggttcaaaa gctttctcag ttgtatgaac       60

gaggctttga gtatgaagtt aaagatgcct tcagtcctgg aaatgctttt acccatcata      120

ccactacttt tccttctggt tcgaccgcca cctcctgcag gtcgaaccag aaggaaaagt      180

agtggtatgc agaacatggt tcaaaagctt tctcagttgt atgaac                     226


<210>  6
<211>  782
<212>  DNA
<213>  Artificial

<220>
<223>  Sequence in virus Y segment L1

<400>  6
cggaatgttg cccggctact acatggctca aattcctcgc tcaccagaca agacaaaacc       60

atgaaggata ctgtatcacg tcagacttcc ctttgttgaa gatcaattcc actggagacg      120

ctggctgaaa ttctcatggg cgatggcatg tttcaattcc actggagacg ctggctgaaa      180

ttctcatggg cgatggcatg tttcctttca tccaaagcaa tcttcatcaa agggaagtct      240

gacgtgatac agtatccttc atggtctttc atctaccttg gtttacctcc aatcaggatc      300

tttgactcac cttcatggat attttcacct tacacgcctg gtggagattt gggtatgtac      360

tctatcatgg tcacagccaa gagatacatc attgaacgaa tgcaatcttg tggttatcag      420

aaggtcaacg gagacgcatc caacgaatcc acgttctttc gagtttacga ctacgtgaaa      480

ttcatgaatg attgcggaat gttgcccggc tactacatgg ctcaaattcc tcgctcacca      540

gacaagacaa aaaccatgaa ggatactgta tcacgtcata tggcctggag gtattgacgc      600

tttcatcggt atgtacaaca atggtgttga agatcaattc cactggagac gctggctgaa      660

attctcatgg gcgatggcat gtttcctttc atccaaagca atcttcatca aagggaagtc      720

tggtctggtg agcgaggaat ttgagccatg tagtagccgg gcaacattcc gcaatcattc      780

at                                                                     782


<210>  7
<211>  242
<212>  DNA
<213>  Artificial

<220>
<223>  Sequence in virus Y segment L2

<400>  7
gacctgcagg aggcgcgtaa gttggattgt cgaatgtgtc ggtggcctga aatactggtt       60

atttcgtaac atcaaaggat caagaaactt cgagacttgg ggcaaagatt atcccggata      120

tgctaccata cacttctttg atgattctgc tggcaagcag gctgctatcc gtcacattgg      180

gaatgacgtt catgtctttc aacatttcga caatccaact tacgcgcctc ctgcaggtcg      240

ac                                                                     242


<210>  8
<211>  691
<212>  DNA
<213>  Artificial

<220>
<223>  Sequence in virus Y segment L2

<400>  8
tactgagttc aatgtgtcta cctacgagtt tggtttctcc ctaataggat ctgtgtcagg       60

taaaggcgtt tcctcgaccc atcagatact cccccaacta caaggatgac ttgggagatt      120

tgcacgatgt tcaggagtta ctcaaaactt acgtcaggag gaaggaagac ttttccattg      180

aggtgatgaa atgcattcaa cgccctattg gtgaaactgg tgtctccttg atcactaagc      240

ttgatgagat tgggaccgtt cttgctaatg gtggtcagtt tgagttagct actctggatt      300

tgggcaatcg agaagtcata cactccatga tggataccat ttctgacact ccaaatgcat      360

cccgcgcgat accatttgac gcgacaagat tggtgatttt ccttgacaca gcatatacag      420

gtccaatgcc atctactgag ttcaatgtgt ctacctacga gtttggtttc tccctaatag      480

gatctgtgtc agggaaaatc accaatcttg tcgcgtcaaa tggtatcgcg cgggatgcat      540

ttggagtgtc agaaatggta tccatcatgg agtgtatgac ttctggattt gggcaatcga      600

gaagtcatac actccatgat ggataccatt tctgacactc caaatgcatc ccgcgcgata      660

ccatttgacg cgacaagatt ggtgattttc c                                     691


<210>  9
<211>  305
<212>  DNA
<213>  Artificial

<220>
<223>  Sequence in virus Y segment L2

<400>  9
ggtcgtgggc aaaggatcaa gctgttcttg agacgatctt ctctatagct ggtaactggt       60

ctcctgcagg tcgacctgca ggtcgacctg caggcgcaag tcctgcaggt cgacctgcag      120

gagaccagtt accagctata gagaagatcg tctcaagaac agcttgatcc acgtttgaag      180

aaagattttc caactgacta ctttgaaaga gaacagtcaa tcaacagaat gttgtttcgt      240

ggttacagga aaacgattga taggtcgtgg gcaaaggatc aagctgttct tgagacgatc      300

ttctc                                                                  305


<210>  10
<211>  210
<212>  DNA
<213>  Artificial

<220>
<223>  Sequence in virus Y segment L2

<400>  10
ggtcgtgggc aaaggatcaa gctgttcttg agacgatctt ctctatagct ggtaactggt       60

tgactgctaa caaatcttat actgcagcct acttcggtgc tagtgggata catccaaatg      120

atgaccaacc actagcaccg aagtaggctg caggaaaacg attgataggt cgtgggcaaa      180

ggatcaagct gttcttgaga cgatcttctc                                       210


<210>  11
<211>  255
<212>  DNA
<213>  Artificial

<220>
<223>  Sequence in  virus Y segment L2

<400>  11
actgttcgtg gggttctttt gcaagattga gaatcgtgga tgttattgga attcggaatg       60

ctcgcgcttc atgtttcgac tccacaaccg ttatggacat cttgatcatt cttgcgagta      120

cataccgatt atgggcaatg tgcgtgaaca tccacgtggc gtgtcatgtc aagagtttgc      180

gatccggaac ccgaccattc cgaattccaa taacatccac gattctcaat cttgcaaaag      240

aaccccacga acagt                                                       255


<210>  12
<211>  636
<212>  DNA
<213>  Artificial

<220>
<223>  Sequence in virus Y segment L2

<400>  12
tacatccaag gtgactatct ccaacgtaga gactggcgtg gatgtacttt tgacacagcc       60

tgcaggtcaa agagtgtgac attgattcac gaatcaaggt cacactcttt gaccaacgaa      120

caccgcacat aaacgtggat tggttcaaca acgtggaata catccaaggt gactatctcc      180

aacgtagaga ctggcgtgga tgtacttttg acacagccat ttgcattttc tcctttggag      240

ccgccacggc cggatcaccg atcggaatga tggaatactt agttgagctg cttgatatat      300

tgaaggacgc tggatgctca aagattgtga tccaactgaa ctgtcctctg atggcgaaac      360

cgactggcgt ggttaataaa ctggaagttg atgtgatcaa cgaggattat tacttcatca      420

agcagggaag agtggaacct tatgcgagtc ctcaagacgt gcttggagct atcacccaaa      480

ccttacctca gtctacaatt cagataaaga ctgaggtaag gtttgggtga tagctccaag      540

cacgtcttga ggactcgcat aaggttccac tcttccctgc ttgatatatt gaaggacgct      600

ggatgctcaa agattgtgat ccaactgaac tgtcct                                636


<210>  13
<211>  237
<212>  DNA
<213>  Artificial

<220>
<223>  Sequence in virus Y segment L3

<400>  13
ttcctggttg cacgacagag ttattctcgc tagagtcatt ctgagttgtc gtagccaact       60

tcgtactctt cttctgattt ttgagcttct tgattctctg cacttcaaca atcgcttctt      120

cttcactgct gacgacactg ctatatcttc taataatcct acaggaaaga ctactgacaa      180

tggtggtacc ggaaagaatc ggggaacatt accggctatt tcagcgtcgg atagcga         237


<210>  14
<211>  326
<212>  DNA
<213>  Artificial

<220>
<223>  Sequence in virus Y segment L3

<400>  14
agttggctac gacaactcag aatgactcta gcgagaataa ctctgtcgtg caaccaggaa       60

tgggtatgtc tgcgaacctg agcacgatca atgcgctacc accaacggtc actatgccac      120

tgcaaacaac tcaatcttct cctggacctg cagttgatca atctggtgag acgaagttgg      180

gaagatcgtc taatgtcagt ggtaaagaag cggcaatgca ggctccggct gtagatcgat      240

ctgaagtcac ggtacctgca ggtccagaag aagaagcgat tgttgaagtg cagagaatca      300

agaagctcaa aaatcagaag aagagt                                           326


<210>  15
<211>  503
<212>  DNA
<213>  Artificial

<220>
<223>  Sequence in virus Y segment L3

<400>  15
ctggagtgca cataatgctg ccgctcttgc ttcgttgtct acgggtttaa ccaccagctc       60

aagcttcttg tccaaagtac cacctcgctt gttcgtcttt gatgatggaa tctgttcatc      120

ttttcgattc atgacggctg ttgaagcacg ttacctgccg gaagtacgtg gttatgcatg      180

gtacgacgag atttatgaca tcatccttcc ttttcctgcc gcagctgttg taaggatcgt      240

tcttgatact gattgggcta tggttagtga tgagaccttg ccgatcaagc tcacgactct      300

gttacccacc ctctcccctc actaaccata gcccaatcag taccagatct gcttctacat      360

atttcgatgc gtcacgctcc tgttgacagt ttctcaacca ctgcccctca gatccaggat      420

gctgaaaggc aattcatcac tatctggagt gcacataatg ctgccgctct tgcttcgttg      480

tctacgggtt taaccaccag ctc                                              503


<210>  16
<211>  200
<212>  DNA
<213>  Artificial

<220>
<223>  Sequence in virus Y segment L3

<400>  16
cgttactgtc accggcacca ttcttcgatt gttgagctct gcgaccaccg actcttctgc       60

gttctgtaac tatgctggag atcaacccaa aaatcctgac tgccgttttg aacaggatat      120

gtgaaaacca aactcaatac gttactgtca ccggcaccat tcttcgattg ttgagctctg      180

cgaccaccga ctcttctgcc                                                  200


<210>  17
<211>  299
<212>  DNA
<213>  Artificial

<220>
<223>  Sequence in virus Y segment L3

<400>  17
atagtcacta caactctgcg ccaacaagac tatcccaatc ccacggcatc catcactgac       60

tacactgcct gcaggtcagt gatggatgcc gtgggattgg gatagtcttg ttggcgcaga      120

gttgtagtga ctatgccatt gtacaaccaa cttgcgatgc acgtccagaa ggcagaagag      180

tcggtggtcg cagagctcaa caatcgaaga atggtgccgg tgacagtaac gtattgaacc      240

aatcatacaa tctgctgccg atactttgcg ttctgtaact atgctggaga tcaacccaa       299


<210>  18
<211>  355
<212>  DNA
<213>  Artificial

<220>
<223>  Sequence in virus Y segment M1

<400>  18
tcagtatttt ccatgcatcc tagaaacacg gtttgcgctt gtgtcttaaa ttcgataata       60

ctctggtcag taggttcaat aggcaggtta atgataggca tggttgcaaa ggagttatta      120

tcgaatttaa gacacaagcg caaaccgtgt ttctaggatg catggaaaat actgacgtca      180

catttgttga ttatcttaaa agggatgtta agatattcat tgtcgacaac cgttttctgc      240

tgccgcagat cgcgaaaatg attgactcct ctgattttga tgaagtgacg agtgctgtta      300

gggttaggtt caaaacagca ctcgtcactt catcaaaatc agaggagtca atcat           355


<210>  19
<211>  373
<212>  DNA
<213>  Artificial

<220>
<223>  Sequence in virus Y segment M1

<400>  19
ttcgtgctcc tgcccccact ctcattgatg gcaaagaggc ttctttcttc caatgactct       60

tacccagatg ttttctttac tcgcgttcca aaccgcgttc tgagagctca ggccgacaac      120

cccaaatcca ctgctcttct gaaattcatg ccaaaagttg tgacctctgc aacaactgct      180

tctgagatgt tggcgatgtc cgttcagaac tctgacgttt acaccttgac tacggatgtg      240

attgggatgc ctctgcgcag atacgctgag aagtcacatt accctgcggc ttttgatttt      300

ggaaatgctc acccctcctg caggtcttat ctgtatttgt cagccagggc agcggacacg      360

gctgcaagga att                                                         373


<210>  20
<211>  205
<212>  DNA
<213>  Artificial

<220>
<223>  Sequence in virus Y segment M1

<400>  20
ttctgcctcc gcaagaaacc gagctagaca acgtggagtc attgttctcc ctgtgatgat       60

caagactttc tatgagaaag agcgtgggct gaagagcgga ccaatcaagt tgcgtcgtga      120

acacaagagg cctgcaggtc cgctcttctg cctccgcaag aaaccgagct agacaacgtg      180

gagtcattgt tctccctgtg atgat                                            205


<210>  21
<211>  183
<212>  DNA
<213>  Artificial

<220>
<223>  Sequence in virus Y segment M1

<400>  21
agacaatggc tatctccagg actggttgat catgctgttt ctgatgtctg actacatcac       60

ttccacttcc agccgccggc gcctgacact agtgaccaac ttcgacccaa tgcggaaatg      120

gtacgacatc actttgctga agatcacctg caggtcgaag ccggtcaact gccacctgtc      180

gat                                                                    183


<210>  22
<211>  722
<212>  DNA
<213>  Artificial

<220>
<223>  Sequence in virus Y segment M2

<400>  22
tggtgcaagt gggaccaacc tgcaggtctg tacgtgatat ccggtgataa cgcatcagac       60

gttgtgaaat gggatagttt aacgccgtta tatggtatag acggtcagat ggttgtcgtt      120

ttgactgcgg tggctatgtc tacctttgag aagatggtga acctgatcga gatgtacaga      180

cctttgcttg aggcttcaca gcagatggct tgttatcgtg actggaggaa agatgttgcc      240

gagcttgatg gctatgttgg tactacccct caatccgcag ttactaacta cgtcactggt      300

gcaagtgtga tcaacctgcg tgagctgagg agtctcggaa agatgtacca gaacatactt      360

ggtgtgatcg ctaactatga tcgtgatatt caggttgcac tgtctttgat tcctcactct      420

acaccaattg gcagcttgaa cgcaaacatg cattccattc tgagactgtt ctccctctct      480

ctgaagccta caaatgtgtg ctatctgtac cctgaagccg cactacaggt gatcaaagcc      540

atctcaccaa ctgtcagaag tgtcgatcct cagaagagta catcaattgt ggaaacactg      600

aaccttttcg aacccgtctt caatggtact ggaccaaatc aacctcctct gacagttggt      660

gaggtggcta tgtctacctt tgagaagatg gtgaacctga tcgagatgta cagacctttg      720

ct                                                                     722


<210>  23
<211>  495
<212>  DNA
<213>  Artificial

<220>
<223>  Sequence in virus Y segment M2

<400>  23
atatctcaca atccagtact cggagatagc acagtcatga cgtccctgct cagtggaatt       60

agaacctgca ggtcattcgg caattacacg actgctgagc agaagtcttc attgccgaac      120

gacctgcaca gtgtcatggc cacacatctg gagaaggctg caaaggcgat gattgctatt      180

gatgatgagg atcaagaagg aggatcgact gtcgccaatg ctatcttcgg agccttgatc      240

tcaaaagaga cacctgcagc tggtccagta ccctggaaga atgtgaaatt tgatgagttg      300

cgagccatgt cagacaaggc tgcctccagc ttcaagagag atccatccca ggctctgata      360

tctcacaatc cagtactcgg agatagcaca gtcatgacgt ccctgctcag tggaattgga      420

aatgcctgca ggtcgttcgg caattacacg actgctgagc agaagtcttc attgccgaac      480

gacctgcaca gtgtc                                                       495


<210>  24
<211>  174
<212>  DNA
<213>  Artificial

<220>
<223>  Sequence in virus Y segment M2

<400>  24
gcctttagtt tatacctgca ggacctgcag gagtagcaca gtcatgacgt ccctgctcag       60

tggaattgga aatgcggtca aaactaaagg cttgtctgcc gcatgcaaag acaagccttt      120

agtttatacc tgcaggacct gcaggagtag cacagtcatg acgtccctgc tcag            174


<210>  25
<211>  207
<212>  DNA
<213>  Artificial

<220>
<223>  Sequence in virus Y segment M3

<400>  25
gtgggatgtt ggatgaagtg aaggaagcgg ctgctgcctt gcctcttcag attgatgtta       60

cagacccatc tcaacatgtt gatccagcga tcatcgcttc actcccatcc cctcccttca      120

cttcatccaa catcccacgt ctttcaagaa cctcaatgat tgctcctttg gggtttggat      180

tgatgcgcaa tgtcgatgtt gttgaga                                          207


<210>  26
<211>  231
<212>  DNA
<213>  Artificial

<220>
<223>  Sequence in virus Y segemnt M3

<400>  26
ctgaagagac gatgaggatt atcgctgaaa gagacgcacg ggatcacgct gctcttccaa       60

tccctgttcc caagccccaa agaaagcccc gatctcagga gatgcaatct gtggatgaga      120

tctggactgg aaagttggct gatgccactg acgctattgc tactgaaatg gctgaagaga      180

cgatgaggat tatcgctgaa agagacgcac gggatcacgc tgctcttcca a               231


<210>  27
<211>  121
<212>  DNA
<213>  Artificial

<220>
<223>  Sequence in virus Y segment S1

<400>  27
actgactttt ctgattttat tgaatctgct ttacatggga ctataatttt ctatgatgac       60

aaacataacg tttcaggcga gtggatctct ggcaccacaa gatttgttag gatcggtacc      120

c                                                                      121


<210>  28
<211>  121
<212>  DNA
<213>  Artificial

<220>
<223>  Sequence in virus Y segment S1

<400>  28
acgtttcagg cgagtggatc tctggcacca caagatttgt taggatcggt acccttagag       60

catgtgttga atgcgggcat aggattggtc tgtctcataa tgctaagcct gctatggtca      120

c                                                                      121


<210>  29
<211>  121
<212>  DNA
<213>  Artificial

<220>
<223>  Sequence in virus Y segment S1

<400>  29
ctatggtcac tcatcaatgc gatggcacaa cgttgtggga tcattctgca tccaatgatt       60

agacatggag tgaatggagc tatttcgtca ctagctgcgc gaatgccctt tctgcaaaca      120

c                                                                      121


<210>  30
<211>  121
<212>  DNA
<213>  Artificial

<220>
<223>  Sequence in virus Y segment S1

<400>  30
cgtcactagc tgcgcgaatg ccctttctgc aaacactgac gcctacctca gaatgctcaa       60

aaaacagtgg actgaagaca acagtcgtgg ttccaatgac agaccagacc attgtcttca      120

g                                                                      121


<210>  31
<211>  230
<212>  DNA
<213>  Artificial

<220>
<223>  Sequence in virus Y segment S1

<400>  31
tgctcaacaa acagtggact gaagacaaca gtcgtggttc caatgacaga ccagaccgac       60

gggggatctc tgaagctaag cgacgcctta gagacaacat gcgaagtata atgaagaaaa      120

agaccactgg tgatctcggt tttagtggtt ggatggtcct cgacctgcag ggattggtct      180

gtctcataat gctaagcctg ctatggtcac tcatcaatgc gatggcacaa                 230


<210>  32
<211>  461
<212>  DNA
<213>  Artificial

<220>
<223>  Sequence in virus Y segment S1

<400>  32
accactaaaa ccgagatcac cagtggtctt tttcttcatt atacttcgca tgttgaaaaa       60

aaagctaagc gacgccttag agacaacatg cgaagtataa tgaagaaaaa gaccactgaa      120

attccacaca agattgtcct gcgccctgca tatggtccgc tacccgtcgt gatgtacctg      180

gatgcacgtg aagatcacaa tgcctacctt cgtgtttcca taaggaccaa ggctgagatg      240

gcaaacatgg tcagaaggat gtgttatgca ggaatgccag cgaacaccat caaaatgacg      300

cagggaacaa cgctgagggc ctgcaggtcc tcctgcagct gtggcatttc agttgagtag      360

tcaggaaaca tagccaattc atccgggtcg aggaccatcc aaccactaaa accgagatca      420

ccagtggtct ttttcttcat tatacttcgc atgttgtctc t                          461


<210>  33
<211>  262
<212>  DNA
<213>  Artificial

<220>
<223>  Sequence in virus Y segment S2

<400>  33
cctctcaggc tatgttgaat gttaaaacta acacctcagt gacatgccct ccacctgtca       60

tacctcgatc agcgtacgtc tatgatgtca tcaacaatca gagattcgct caaagcacgc      120

ctgcaggtca ctgaggtgtt agttttaaca ttcaacatag cctgagaggt gaacgccaga      180

agttacagaa acttgatgtt cacctctcag gctatgttga atgttaaaac taacacctca      240

gtgacatgcc ctccacctgt ca                                               262


<210>  34
<211>  464
<212>  DNA
<213>  Artificial

<220>
<223>  Sequence in virus Y segment S2

<400>  34
gaaaccattc caggtggtag ttggattgaa gtatccacaa gcgctaccaa gaaacaacag       60

agctttgatg ctgttgtttc ttggtagcgc ttgtggatac ttcaatccaa ctaccacctg      120

gaatggtttc tattttcgtc aagctggaaa acctggttcc tggggcgctg atctagatcc      180

aatccttgtc cgcggtgatt ctgctctgtt gaatcgcgct accttcattc gcgtgaacag      240

gtgggttgtc ttcaaagatt tcctctggca aatgtctcgc ggaatacttc acgccctaat      300

ccttggagga atgatctgcg cggtagagca gccattgaga gctttgaatg ttgctggagt      360

gcttgggaac actatctgtg caccttggac tggagtgaat ggacctagat cagcgcccca      420

ggaaccaggt tttccagctt gacgaaaata gaaaccattc cagg                       464


<210>  35
<211>  132
<212>  DNA
<213>  Artificial

<220>
<223>  Sequence in virus Y segment S3

<400>  35
aagtgatatt cagtttttgg cttattagcc tgacgcccaa gatcgaagtt cgacatgata       60

aaatttaatt gcatacattc ctatcatgtc gaacttcgat cttgggcgtc aggctaataa      120

gccaaaaact ga                                                          132


<210>  36
<211>  153
<212>  DNA
<213>  Artificial

<220>
<223>  Sequence in virus Y segment S3

<400>  36
atcaattttc ctgctcggtt tgacacggca aaaagcgtca gtcccctctc cgccatgacc       60

aatgacggct tcctcaaata caaggcgcct gcaggtcatg gcggagaggg gactgacgct      120

ttttgccgtg tcaaaccgag caggaaaatt gat                                   153


<210>  37
<211>  273
<212>  DNA
<213>  Artificial

<220>
<223>  cDNA of virus Y segment S4

<400>  37
tgcacatacg tcaagcaacg gtgactgaga atgtgcaacc attacacaca tgtcacgaaa       60

tgataatcag acaaaatctt agggttaggg ttaggtatac tgcagtcaac agtggcagta      120

ctgaagcagc actatagcag agctataagg agcactcagg ccaaaccaac aactccatgc      180

agagcaagag aggtaaggga agggtcaggg agaagatgct gaccgtagaa atgctactta      240

accttaagat tttgtctgat tatcatttcg tgt                                   273


<210>  38
<211>  462
<212>  DNA
<213>  Artificial

<220>
<223>  virus Y fragment

<400>  38
ttggtgttgt gaagtatctg aagaatgaca ctcagcatta tgtggctcga aacctgcagg       60

caggcttact gcctgcaggt ccctgcaggt ttcgagccac ataatgctga gtgtcattct      120

tcagatcctg ttggtgttgt gaagtatctg aagaatgaca ctcagcatta tgtggctcga      180

aacctgcagg tcatggcgtt agaattcaag tgcagagacg tagcagaacg ataatgcctt      240

tcagtgtacc acccttgtca agaaagtatt gactgacaag ggtgttacac taaagaattt      300

ctcaaaatcg ggtgcgaaga gttctactaa gatagtacag gctgcacaac tggctaacat      360

ccctttcact cagtatcaag acaccataat ggcaccagtg tctcatggcg ttagaattca      420

agtgcagaga cgtagcagaa cgataatgcc tttcagtgta cc                         462


<210>  39
<211>  691
<212>  DNA
<213>  Artificial

<220>
<223>  virus Y fragment

<400>  39
tactgagttc aatgtgtcta cctacgagtt tggtttctcc ctaataggat ctgtgtcagg       60

taaaggcgtt tcctcgaccc atcagatact cccccaacta caaggatgac ttgggagatt      120

tgcacgatgt tcaggagtta ctcaaaactt acgtcaggag gaaggaagac ttttccattg      180

aggtgatgaa atgcattcaa cgccctattg gtgaaactgg tgtctccttg atcactaagc      240

ttgatgagat tgggaccgtt cttgctaatg gtggtcagtt tgagttagct actctggatt      300

tgggcaatcg agaagtcata cactccatga tggataccat ttctgacact ccaaatgcat      360

cccgcgcgat accatttgac gcgacaagat tggtgatttt ccttgacaca gcatatacag      420

gtccaatgcc atctactgag ttcaatgtgt ctacctacga gtttggtttc tccctaatag      480

gatctgtgtc agggaaaatc accaatcttg tcgcgtcaaa tggtatcgcg cgggatgcat      540

ttggagtgtc agaaatggta tccatcatgg agtgtatgac ttctggattt gggcaatcga      600

gaagtcatac actccatgat ggataccatt tctgacactc caaatgcatc ccgcgcgata      660

ccatttgacg cgacaagatt ggtgattttc c                                     691


<210>  40
<211>  255
<212>  DNA
<213>  Artificial

<220>
<223>  virus Y  fragment

<400>  40
actgttcgtg gggttctttt gcaagattga gaatcgtgga tgttattgga attcggaatg       60

ctcgcgcttc atgtttcgac tccacaaccg ttatggacat cttgatcatt cttgcgagta      120

cataccgatt atgggcaatg tgcgtgaaca tccacgtggc gtgtcatgtc aagagtttgc      180

gatccggaac ccgaccattc cgaattccaa taacatccac gattctcaat cttgcaaaag      240

aaccccacga acagt                                                       255


<210>  41
<211>  299
<212>  DNA
<213>  Artificial

<220>
<223>  virus Y  fragment

<400>  41
atagtcacta caactctgcg ccaacaagac tatcccaatc ccacggcatc catcactgac       60

tacactgcct gcaggtcagt gatggatgcc gtgggattgg gatagtcttg ttggcgcaga      120

gttgtagtga ctatgccatt gtacaaccaa cttgcgatgc acgtccagaa ggcagaagag      180

tcggtggtcg cagagctcaa caatcgaaga atggtgccgg tgacagtaac gtattgaacc      240

aatcatacaa tctgctgccg atactttgcg ttctgtaact atgctggaga tcaacccaa       299


<210>  42
<211>  205
<212>  DNA
<213>  Artificial

<220>
<223>  virus Y fragment

<400>  42
ttctgcctcc gcaagaaacc gagctagaca acgtggagtc attgttctcc ctgtgatgat       60

caagactttc tatgagaaag agcgtgggct gaagagcgga ccaatcaagt tgcgtcgtga      120

acacaagagg cctgcaggtc cgctcttctg cctccgcaag aaaccgagct agacaacgtg      180

gagtcattgt tctccctgtg atgat                                            205


<210>  43
<211>  495
<212>  DNA
<213>  Artificial

<220>
<223>  virus Y  fragment

<400>  43
atatctcaca atccagtact cggagatagc acagtcatga cgtccctgct cagtggaatt       60

agaacctgca ggtcattcgg caattacacg actgctgagc agaagtcttc attgccgaac      120

gacctgcaca gtgtcatggc cacacatctg gagaaggctg caaaggcgat gattgctatt      180

gatgatgagg atcaagaagg aggatcgact gtcgccaatg ctatcttcgg agccttgatc      240

tcaaaagaga cacctgcagc tggtccagta ccctggaaga atgtgaaatt tgatgagttg      300

cgagccatgt cagacaaggc tgcctccagc ttcaagagag atccatccca ggctctgata      360

tctcacaatc cagtactcgg agatagcaca gtcatgacgt ccctgctcag tggaattgga      420

aatgcctgca ggtcgttcgg caattacacg actgctgagc agaagtcttc attgccgaac      480

gacctgcaca gtgtc                                                       495


<210>  44
<211>  174
<212>  DNA
<213>  Artificial

<220>
<223>  virus Y  fragment

<400>  44
gcctttagtt tatacctgca ggacctgcag gagtagcaca gtcatgacgt ccctgctcag       60

tggaattgga aatgcggtca aaactaaagg cttgtctgcc gcatgcaaag acaagccttt      120

agtttatacc tgcaggacct gcaggagtag cacagtcatg acgtccctgc tcag            174


<210>  45
<211>  207
<212>  DNA
<213>  Artificial

<220>
<223>  virus Y  fragment

<400>  45
gtgggatgtt ggatgaagtg aaggaagcgg ctgctgcctt gcctcttcag attgatgtta       60

cagacccatc tcaacatgtt gatccagcga tcatcgcttc actcccatcc cctcccttca      120

cttcatccaa catcccacgt ctttcaagaa cctcaatgat tgctcctttg gggtttggat      180

tgatgcgcaa tgtcgatgtt gttgaga                                          207


<210>  46
<211>  231
<212>  DNA
<213>  Artificial

<220>
<223>  virus Y  fragment

<400>  46
ctgaagagac gatgaggatt atcgctgaaa gagacgcacg ggatcacgct gctcttccaa       60

tccctgttcc caagccccaa agaaagcccc gatctcagga gatgcaatct gtggatgaga      120

tctggactgg aaagttggct gatgccactg acgctattgc tactgaaatg gctgaagaga      180

cgatgaggat tatcgctgaa agagacgcac gggatcacgc tgctcttcca a               231


<210>  47
<211>  262
<212>  DNA
<213>  Artificial

<220>
<223>  virus Y  fragment

<400>  47
cctctcaggc tatgttgaat gttaaaacta acacctcagt gacatgccct ccacctgtca       60

tacctcgatc agcgtacgtc tatgatgtca tcaacaatca gagattcgct caaagcacgc      120

ctgcaggtca ctgaggtgtt agttttaaca ttcaacatag cctgagaggt gaacgccaga      180

agttacagaa acttgatgtt cacctctcag gctatgttga atgttaaaac taacacctca      240

gtgacatgcc ctccacctgt ca                                               262


<210>  48
<211>  464
<212>  DNA
<213>  Artificial

<220>
<223>  virus Y  fragment

<400>  48
gaaaccattc caggtggtag ttggattgaa gtatccacaa gcgctaccaa gaaacaacag       60

agctttgatg ctgttgtttc ttggtagcgc ttgtggatac ttcaatccaa ctaccacctg      120

gaatggtttc tattttcgtc aagctggaaa acctggttcc tggggcgctg atctagatcc      180

aatccttgtc cgcggtgatt ctgctctgtt gaatcgcgct accttcattc gcgtgaacag      240

gtgggttgtc ttcaaagatt tcctctggca aatgtctcgc ggaatacttc acgccctaat      300

ccttggagga atgatctgcg cggtagagca gccattgaga gctttgaatg ttgctggagt      360

gcttgggaac actatctgtg caccttggac tggagtgaat ggacctagat cagcgcccca      420

ggaaccaggt tttccagctt gacgaaaata gaaaccattc cagg                       464


<210>  49
<211>  153
<212>  DNA
<213>  Artificial

<220>
<223>  virus Y  fragment

<400>  49
atcaattttc ctgctcggtt tgacacggca aaaagcgtca gtcccctctc cgccatgacc       60

aatgacggct tcctcaaata caaggcgcct gcaggtcatg gcggagaggg gactgacgct      120

ttttgccgtg tcaaaccgag caggaaaatt gat                                   153


<210>  50
<211>  18
<212>  DNA
<213>  Artificial

<220>
<223>  primer

<400>  50
tcgtggttcc aatgacag                                                     18


<210>  51
<211>  18
<212>  DNA
<213>  primer

<400>  51
ccaaccacta aaaccgag                                                     18


<210>  52
<211>  24
<212>  DNA
<213>  Artificial

<220>
<223>  probe

<400>  52
acgccttaga gacaacatgc gaag                                              24


<210>  53
<211>  21
<212>  DNA
<213>  Artificial

<220>
<223>  primer

<400>  53
gaccaacata acgtttcagg c                                                 21


<210>  54
<211>  21
<212>  DNA
<213>  Artificial

<220>
<223>  primer

<400>  54
atccaaccac taaaaccgag a                                                 21


<210>  55
<211>  561
<212>  DNA
<213>  Artificial

<220>
<223>  Sequence in virus Y segment S1

<400>  55
aggacggcga caactactga cttttctgat tttattgaat ctgctttaca tgggactata       60

attttctatg atgaccaaca taacgtttca ggcgagtgga tctctggcac cacaagattt      120

gttaggatcg gtacccttag agtatgtgtt gaatgcgggc ataggattgg tctgtctcat      180

aatgctaagc ctgctatggt cactcatcaa tgcgatggca caacgttgtg ggatcattct      240

gcatccaatg attggacatg gagtgaatgg agctatttcg tcactagctg cgcgaatgcc      300

ctttctgcaa acactgacgc ctacctcaga atgctcaaca aacagtggac tgaagacaac      360

agtcgtggtt ccaatgacag accagaccga cgggggatct ctgaagctaa gcgacgcctt      420

agagacaaca tgcgaagtat aatgaagaaa aagaccactg gtgatctcgg ttttagtggt      480

tggatggtcc tcgacccgga tgaattggct atgtttcctg actactcaac tgaaatgcca      540

cagctgcagg aggacctgga t                                                561


