                         SEQUENCE LISTING

<110>  Geller, Bruce L.
       Greenberg, David
 
<120>  ANTISENSE ANTIBACTERIAL COMPOUNDS AND METHODS

<130>  SATH-004/01WO

<150>  62/000431
<151>  2014-05-19

<150>  62/129746
<151>  2015-03-06

<160>  71    

<170>  PatentIn version 3.5

<210>  1
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  acpP targeting sequence

<400>  1
cttcgatagt g                                                            11


<210>  2
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  acpP targeting sequence

<400>  2
atatcgctca c                                                            11


<210>  3
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  acpP targeting sequence

<400>  3
attctcctca t                                                            11


<210>  4
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  acpP targeting sequence

<400>  4
cacaggaatt c                                                            11


<210>  5
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  acpS targeting sequence

<400>  5
ttgccattag c                                                            11


<210>  6
<211>  17
<212>  DNA
<213>  artificial

<220>
<223>  acp-E targeting sequence

<400>  6
ctgtagtgat ttcacca                                                      17


<210>  7
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  fabA targeting sequence

<400>  7
ttatctacca t                                                            11


<210>  8
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  fabB targeting sequence

<400>  8
gcacgtttca t                                                            11


<210>  9
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  fabI targeting sequence

<400>  9
agaaaaccca t                                                            11


<210>  10
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  gapA targeting sequence

<400>  10
ttgatagtca t                                                            11


<210>  11
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  accA targeting sequence

<400>  11
gcttttttca t                                                            11


<210>  12
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  murA targeting sequence

<400>  12
atccatttag t                                                            11


<210>  13
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  murA targeting sequence

<400>  13
catttagttt g                                                            11


<210>  14
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  murA targeting sequence

<400>  14
aatttatcca t                                                            11


<210>  15
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  murA targeting sequence

<400>  15
aaatttatcc a                                                            11


<210>  16
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  rpmB targeting sequence

<400>  16
actcgggaca t                                                            11


<210>  17
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  rpmB targeting sequence

<400>  17
ctattctcca a                                                            11


<210>  18
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  rpmB targeting sequence

<400>  18
ggcagactcg g                                                            11


<210>  19
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  rpmB targeting sequence

<400>  19
cttagacatg g                                                            11


<210>  20
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  adk targeting sequence

<400>  20
atgatacgca t                                                            11


<210>  21
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  infA targeting sequence

<400>  21
tctttggcca t                                                            11


<210>  22
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  ftsZ targeting sequence

<400>  22
tcaaatgagg c                                                            11


<210>  23
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  ftsZ targeting sequence

<400>  23
aatgaggcca t                                                            11


<210>  24
<211>  13
<212>  DNA
<213>  artificial

<220>
<223>  ftsZ targeting sequence

<400>  24
atagtttctc tcc                                                          13


<210>  25
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  rpoD targeting sequence

<400>  25
tcatctttgc t                                                            11


<210>  26
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  rpoD targeting sequence

<400>  26
ttttgctcca t                                                            11


<210>  27
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  aroC targeting sequence

<400>  27
ttccctgcca t                                                            11


<210>  28
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  aroC targeting sequence

<400>  28
tttccagcca t                                                            11


<210>  29
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  murF targeting sequence

<400>  29
acgctaatca t                                                            11


<210>  30
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  lpxC targeting sequence

<400>  30
tgtttgatca t                                                            11


<210>  31
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  kdtA targeting sequence

<400>  31
aattcgagca t                                                            11


<210>  32
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  boxA targeting sequence

<400>  32
tgttaaagag c                                                            11


<210>  33
<211>  15
<212>  DNA
<213>  artificial

<220>
<223>  rpoD-E targeting sequence

<400>  33
cttgtaacca cacca                                                        15


<210>  34
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  pryC targeting sequence

<400>  34
ggtgcagtca t                                                            11


<210>  35
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  pryA targeting sequence

<400>  35
gacttaatca a                                                            11


<210>  36
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  lgt targeting sequence

<400>  36
ctactggtca t                                                            11


<210>  37
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  folA targeting sequence

<400>  37
cattgagatt t                                                            11


<210>  38
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  infB targeting sequence

<400>  38
acatctgtca t                                                            11


<210>  39
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  nrdA targeting sequence

<400>  39
ttctgattca t                                                            11


<210>  40
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  nrdB targeting sequence

<400>  40
gtatatgcca t                                                            11


<210>  41
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  zipA targeting sequence

<400>  41
tcctgcatca t                                                            11


<210>  42
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  coaA targeting sequence

<400>  42
atatacctca t                                                            11


<210>  43
<211>  17
<212>  DNA
<213>  artificial

<220>
<223>  gyrA-E targeting sequence

<400>  43
gttaccctga ccgacca                                                      17


<210>  44
<211>  16
<212>  DNA
<213>  artificial

<220>
<223>  gyrA-E targeting sequence

<400>  44
gttaccctga ccacca                                                       16


<210>  45
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  mrdA targeting sequence

<400>  45
tgtttcatac g                                                            11


<210>  46
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  lpxB targeting sequence

<400>  46
ggtttgccaa g                                                            11


<210>  47
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  lpxC targeting sequence

<400>  47
tgtttcacca t                                                            11


<210>  48
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  kdtA targeting sequence


<220>
<221>  misc_feature
<222>  (1)..(1)
<223>  I

<220>
<221>  misc_feature
<222>  (2)..(2)
<223>  I

<220>
<221>  misc_feature
<222>  (3)..(3)
<223>  I

<220>
<221>  misc_feature
<222>  (4)..(4)
<223>  I

<400>  48
nnnntcgcca a                                                            11


<210>  49
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  boxA targeting sequence

<400>  49
ctcttaatga t                                                            11


<210>  50
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  boxC targeting sequence

<400>  50
atccacacaa g                                                            11


<210>  51
<211>  15
<212>  DNA
<213>  artificial

<220>
<223>  rpoD-E targeting sequence

<400>  51
tccaccaagt cacca                                                        15


<210>  52
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  pryC targeting sequence

<400>  52
agagttcaag g                                                            11


<210>  53
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  carA targeting sequence

<400>  53
ggtgctcaaa c                                                            11


<210>  54
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  adeA targeting sequence

<400>  54
atactgtcca a                                                            11


<210>  55
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  blaT targeting sequence

<400>  55
ctcttccttt t                                                            11


<210>  56
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  cml targeting sequence

<400>  56
tccttctgat t                                                            11


<210>  57
<211>  12
<212>  PRT
<213>  artificial

<220>
<223>  CPP sequence


<220>
<221>  MOD_RES
<222>  (2)..(2)
<223>  Acp

<220>
<221>  MOD_RES
<222>  (5)..(5)
<223>  Acp

<220>
<221>  MOD_RES
<222>  (8)..(8)
<223>  Acp

<220>
<221>  MOD_RES
<222>  (11)..(11)
<223>  Acp

<400>  57

Arg Xaa Arg Arg Xaa Arg Arg Xaa Arg Arg Xaa Arg 
1               5                   10          


<210>  58
<211>  10
<212>  PRT
<213>  artificial

<220>
<223>  CPP sequence

<400>  58

Arg Phe Phe Arg Phe Phe Arg Phe Phe Arg 
1               5                   10  


<210>  59
<211>  14
<212>  PRT
<213>  artificial

<220>
<223>  CPP sequence


<220>
<221>  MOD_RES
<222>  (2)..(2)
<223>  Acp

<220>
<221>  MOD_RES
<222>  (5)..(5)
<223>  Acp

<220>
<221>  MOD_RES
<222>  (8)..(8)
<223>  Acp

<220>
<221>  MOD_RES
<222>  (11)..(11)
<223>  Acp

<220>
<221>  MOD_RES
<222>  (13)..(13)
<223>  Acp

<220>
<221>  MOD_RES
<222>  (14)..(14)
<223>  bAla

<400>  59

Arg Xaa Arg Arg Xaa Arg Arg Xaa Arg Arg Xaa Arg Xaa Xaa 
1               5                   10                  


<210>  60
<211>  12
<212>  PRT
<213>  artificial

<220>
<223>  CPP sequence


<220>
<221>  MOD_RES
<222>  (11)..(11)
<223>  Acp

<220>
<221>  MOD_RES
<222>  (12)..(12)
<223>  bAla

<400>  60

Arg Phe Phe Arg Phe Phe Arg Phe Phe Arg Xaa Xaa 
1               5                   10          


<210>  61
<211>  12
<212>  PRT
<213>  artificial

<220>
<223>  CPP sequence

<400>  61

Arg Phe Arg Arg Phe Arg Arg Phe Arg Arg Phe Arg 
1               5                   10          


<210>  62
<211>  12
<212>  PRT
<213>  artificial

<220>
<223>  CPP sequence

<400>  62

Arg Tyr Arg Arg Tyr Arg Arg Tyr Arg Arg Tyr Arg 
1               5                   10          


<210>  63
<211>  12
<212>  PRT
<213>  artificial

<220>
<223>  CPP sequence

<400>  63

Arg Gly Arg Arg Gly Arg Arg Gly Arg Arg Gly Arg 
1               5                   10          


<210>  64
<211>  14
<212>  PRT
<213>  artificial

<220>
<223>  CPP sequence


<220>
<221>  MOD_RES
<222>  (13)..(13)
<223>  Acp

<220>
<221>  MOD_RES
<222>  (14)..(14)
<223>  bAla

<400>  64

Arg Phe Arg Arg Phe Arg Arg Phe Arg Arg Phe Arg Xaa Xaa 
1               5                   10                  


<210>  65
<211>  14
<212>  PRT
<213>  artificial

<220>
<223>  CPP sequence


<220>
<221>  MOD_RES
<222>  (13)..(13)
<223>  Acp

<220>
<221>  MOD_RES
<222>  (14)..(14)
<223>  bAla

<400>  65

Arg Tyr Arg Arg Tyr Arg Arg Tyr Arg Arg Tyr Arg Xaa Xaa 
1               5                   10                  


<210>  66
<211>  14
<212>  PRT
<213>  artificial

<220>
<223>  CPP sequence


<220>
<221>  MOD_RES
<222>  (13)..(13)
<223>  Acp

<220>
<221>  MOD_RES
<222>  (14)..(14)
<223>  bAla

<400>  66

Arg Gly Arg Arg Gly Arg Arg Gly Arg Arg Gly Arg Xaa Xaa 
1               5                   10                  


<210>  67
<211>  12
<212>  PRT
<213>  artificial

<220>
<223>  CPP sequence


<220>
<221>  MOD_RES
<222>  (11)..(11)
<223>  Acp

<220>
<221>  MOD_RES
<222>  (12)..(12)
<223>  bAla

<400>  67

Arg Phe Phe Arg Phe Phe Arg Phe Phe Arg Xaa Xaa 
1               5                   10          


<210>  68
<211>  11
<212>  PRT
<213>  artificial

<220>
<223>  CPP sequence

<400>  68

Arg Phe Phe Arg Phe Phe Arg Phe Phe Arg Gly 
1               5                   10      


<210>  69
<211>  60
<212>  DNA
<213>  Escherichia coli

<400>  69
aaagcgagtt ttgataggaa atttaagagt atgagcacta tcgaagaacg cgttaagaaa       60


<210>  70
<211>  90
<212>  DNA
<213>  Acinetobacter baumannii

<400>  70
ttttaaaaat ttttatattc aattaaacta gtggcaaatc aaacgccaca agcaatgagg       60

agaattcctg tgagcgatat cgaacaacgc                                        90


<210>  71
<211>  11
<212>  DNA
<213>  artificial

<220>
<223>  scramble targeting sequence

<400>  71
tctcagatgg t                                                            11


