                               SEQUENCE LISTING

<110> UNIVERSITY OF WASHINGTON
 
<120> MODIFIED METHANOTROPHIC BACTERIA AND USES THEREOF

<130> 034186-084860-PCT

<140> PCT/US2015/031088
<141> 2015-05-15

<150> 61/993,636
<151> 2014-05-15

<160> 18    

<170> PatentIn version 3.5

<210> 1
<211> 6
<212> PRT
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      6xHis tag

<400> 1
His His His His His His 
1               5       


<210> 2
<211> 33
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      primer

<400> 2
ttagatctcg gccaaaattg gcgatgagtt ggt                                    33


<210> 3
<211> 34
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
       primer

<400> 3
taccatggac gatgacggca gccggcttat cgac                                   34


<210> 4
<211> 35
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
       primer

<400> 4
ttccgcgggc acactctata acctggatca gcatg                                  35


<210> 5
<211> 31
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      primer

<400> 5
tagagctcgc ctcatccgcc ttggtcagta c                                      31


<210> 6
<211> 28
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      primer

<400> 6
gagacgtcgc tcaaccgact cattgacg                                          28


<210> 7
<211> 28
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      primer

<400> 7
gtcagctggg atgaatcggc ctcattcg                                          28


<210> 8
<211> 28
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      primer

<400> 8
gagggcccgt ggaatagtag cgctaaac                                          28


<210> 9
<211> 33
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      primer

<400> 9
gagagctcga tcaaaatccg gcgtcggggg tcg                                    33


<210> 10
<211> 32
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      primer

<400> 10
gaggggcccg tggaatagta gtgctaaaca at                                     32


<210> 11
<211> 33
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      primer

<400> 11
gaggagctcc gtcaaaggac gccgtgagcc cag                                    33


<210> 12
<211> 31
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      primer

<400> 12
gaggacgtcc acagcggctt tgactggatc g                                      31


<210> 13
<211> 33
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      primer

<400> 13
gagggtaccg agtttaccga ggtggatttc gcc                                    33


<210> 14
<211> 29
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      primer

<400> 14
gaccatggca caacggcata ttggattgc                                         29


<210> 15
<211> 27
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      primer

<400> 15
gagaattcgc tgtcggcatc tttgatc                                           27


<210> 16
<211> 18991
<212> DNA
<213> Methylomicrobium alcaliphilum

<400> 16
gctcaaccga ctcattgacg aaaatttcga tgacattcaa aaaattatcg ccggctacca       60

ggtccaactt ttaccgatcc caaaacaaaa aagccgcaaa gacgacgact aattcatcgg      120

atacattatt tcacttggag cagtcaagca ttcggtttta tcctaagttc ggtagtttaa      180

ccatgaagct catgaaggac ttcaaaaaat taccttaaca ttctcgctaa ggaacgagca      240

tgaaataact tcgacaaatg ctgaaagggg gttcggtggc tcgattgaca ggcgtcggcg      300

gcagggcaga tttttgctcc tgcaaaatcc gcattcatgc catccatggc aatctgatag      360

ccgccgtcga gcctacatgg atgtattcac ccagcaccta aattccatag cccattggct      420

atggttaact atcttggata atttaggtgc tgggttcacg gcgtcctgtc aagcgagtcg      480

ccgcaccacc acaatgccta aaacttgtag aagtaaattt gtgcatattc ctaaccttgt      540

actctacaca aacgcagaac accttattcg tcataatctt catggtgaaa tgcttttttc      600

taggcttata gttgaggcgg taatcaaaat acggatataa catccaccag gctaaatcat      660

ttgaatttag cctggttttt tcaggattaa ttctttttgg gaggcgtcaa caccgcttgc      720

ggaccgggtg ccgtttggct gtgttttaag acgacccctc ctaaaggcgg caaggtgata      780

tagagcgaat gaggccgatt catccaagcc tgctcttgag tccaaatacc gtccggcgaa      840

ttaaccaccc cgctgccgcc gaattcctgc gcatcggagt taaggatttc gtcataacgc      900

ccagcagccg gtacaccaat gtgataatac tcccgcggga ccggagtaaa gttcagcgcg      960

acaaccaaaa actctcctgt atcggcagcc ttgcggatat aaatcagcac cgagttatgg     1020

gcatcatggc aatcgatcca ctcaaatccc gcatcggtaa aatcattggc atgtaaagcc     1080

gtctcctttt gataggtgtg attcagcgtc ttaaccaaat gctgcagtcc ttggtggaaa     1140

gggtaggcca acacatacca atcaagcact tgactgctgt cccattcgcg cccttgaccg     1200

aattcacaac ccatgaagag caactttttg ccggggtggg taaacatata aaaatacacc     1260

aaacgcaaat tagcaaagcg ctgccactca tcgccgggca ttttatataa catcgattgc     1320

ttgccgtgaa ccacttcatc gtgagaaaac ggcaacaaaa aattttccgt aaaggcataa     1380

atcaggctaa aggttaattc tccctgatgg tattggcgaa atatcgactc tttttccata     1440

tagcgcaacg tatcgttcat ccagcccata ttccacttta aatcgaagcc caagccaccg     1500

acatacggag gcttggtaac ctgcggccaa gcggtcgact cttcggccat gattaacacg     1560

ccaggaactt gctgatgggt aatttcgttc aatgatctta aaaagtcgat ggcctccaaa     1620

ttttcgcggc cgccgtactt attgggtatc cactcgcctt cctcacggga ataatcaaga     1680

tacaacattg acgctaccgc atcgactcgc aaaccgtcca catgatattc ctcgagccag     1740

aatagcgcac tcgagatcaa aaagttctta acttcatagc ggccgaaatt aaagatcaac     1800

gtcgaccaat cacgatgttc gccgagcctt ggatcttcat gctcataaag cgatgtaccg     1860

tcgaaccatg caagcgcatg cgcatctttt ggaaaatgcg ccggcaccca atcgagaatg     1920

acaccgatct cgtgctgatg acaataatcg acaaaccagc gaaaatcttc ggggctaccg     1980

aaacggctgg ttggcgcata gtaccccgtc gtttggtagc cccacgattt atcataggga     2040

tgctcagtaa ccggtaacaa ctcaagatga gtaaagccta aggttttggc atattccacc     2100

aaggccaccg ccaattgccg gtaattgagc aactcgcctt cggagcctcg ctgccaagac     2160

cccaaatgca cctcgtagat gctaatcggc ttgtgctgcc aatcgaactt ctcacgctgt     2220

ttcaaccatt tttggtcatg ccaattaaaa ttatcgtttg ccgttacaat actggccgta     2280

ttcgggcgaa cctcataaaa ccgaccgtaa ggatctgttt ttaataaaat atcgccattc     2340

ttcgcgcgaa tttcatactt ataaaccaag ccgggctcta agcctggaat aaaaagctcc     2400

caaacgccat taccgcgcac ccgcatttga tggcaacggc cgtcccagcg gttgaaatcg     2460

ccgactacgc tgactcgcga tgcattaggc gcccacacgg aaaacagcac gccggcaaca     2520

ttttcgattt cgtgtacgcg tgcacccagc aaacggtaag catgccaatg tttaccttca     2580

ctgaataaat gtaaatcgta atccgataat tgcggcccgt agcaataagg atcgtaaccg     2640

atgtgctcgt aatggtcttg atcgcgccaa atcagccgat agcatggagg aacttgtgat     2700

gctaagccat gccattcgaa aagagccgta ccctcgattc gagtcaatgg caagtttcct     2760

tcagccaagg ccacggtttc ggcatggggc aaaaaagctc gtaccacaac ctgtttgtca     2820

tccttgggat ggcggcctaa aacggcaaag ggatcgctgc attttacatc gacaagactc     2880

tgtaattctg tggacagttt tgttttactc atctgctttt gcgggaagcc cgcgaattta     2940

taccccttac ttgtcaaatt tcggtgccgg ggtgcccgtc aaaggacgcc gtaaatacgt     3000

ccatgtaggc tctatgatag catccatgct atcaaagcct ttgccgaaca ccccgacacc     3060

tccatagact aatgccgaaa tttaaagtgc gaaaggtggt atatcattcg ggtggggata     3120

gctcagctcg cctcggcaag cccggttccc gctctcctgt tttaatgtgc tatcctggtt     3180

ttagcattga ttcggcgtcg ttattctggc acctgtaatt gtaaaatctt aacttttacc     3240

gagccgtcta ctgtgtagtg accatgaccc gcaccatacc cggcaataag tcgaaatgat     3300

agggactcgg cacataagct agcggatact ccggcgatag atcggtaaac ggcgcgcgcg     3360

actgaacata ttgatataga tcgggcgtcg aaaactcatg gcgttgccaa gggtctttat     3420

ttaacaagat caaagcttct tgttgtccgg ataggctggc tttccagaaa aagagtatcg     3480

gcgactgcgg ataaccgatt aggttaaaag gcccctcttc ctgaaataca gggtaatcgg     3540

ctttcaccgt gttgacttga gtaataaact cggtcaaatc cacctcggta ttttcccagt     3600

cctcggggcg agtatgcacc acatgcagcg gtttactaaa accgtattcg taacccatcg     3660

gcatcatcac gccgctgctg aacactgcgg aaaacaagta acgctgcttt agggcttcgg     3720

cattgccgtt gctttcggca aataaacgag gcgtatcgtg actttcggga aaactgatcg     3780

acggggcggc ttggcgcaat aattgatact gttccggtag ccaagggctt tcgaagtccc     3840

accatttgga actattgaaa atataatcga acccggcttg cgcggtttgc ttggttcgct     3900

cggcgctaca gccaagcgtt tcagcggtaa acaccacatc gggatgtttt tgtttcgtat     3960

ccgtaatcaa ttgccgccaa agttcgggcg ctaattgata ggcggcatcg caacgaaagc     4020

ctttaaaacc cagatcgatg tatgactcga tgattttacg ataataggca taaagcccat     4080

tatcgtgact gcggccatga tcgagttgcg ctaaatcctc ccataccact ttatggccgc     4140

cgtcttcgag acaaaaagga cgctgcacct gcccatgctc acgaacaaac cattcagggt     4200

gctgttttaa caagggcgaa tcgatcgcac agtgattcaa taccaaatcg gtcataaagc     4260

ggagtcggtg ttttttctca gcctgttgaa tcaagccccg caattgttgc tcggcggtct     4320

ttttggattt cggatcgact aacagcgggt ttaactgaaa ataatcggca atagaatata     4380

gactgccgga tgccccggtt ttttgtaacg ggttgacgaa aacccaatcg aaccgcatcg     4440

ccgcggccct ttccaagtgc gcctcccact gcccgaagtg gcctgccaac agggggaaca     4500

agttgtacat cctcatgaat cggcctcttt atttgttacg aatatagtca tagatattca     4560

ggtaatgttg gcccggatat ttccaggagt aatcgtaacg cattgcattt ttcatcaact     4620

cccgaaaatg atccggaaat tgataataac aatcgatcgc gcgcgacaat gccgactcca     4680

gcccttcatt gttgtaatcc ctaaaaacat agccgttgcg ctcgtgcaag gctttatgat     4740

gcgcatgatc cttatcgaat accgtatcgg ccaatcctcc gacctcgcga acgatcggaa     4800

ccgtgccgta tttcatcgat atcaactgcg tcaaaccgca aggttcgaat aaactaggca     4860

cgacgatcat atccgcaccg gcataaatca gatgcgccaa gccttcgtcg aaaccgactt     4920

cgatatggca atcgggactg tcgttcaaat gccgcttcaa ctcccagaaa tagctattga     4980

tatcccgctc gggacttgag cctagcaaca cgaactgcgc ccgatggttc aatgaataaa     5040

acaatgcatg acgaaccaag tccaaccctt tctgaggatc gagccgcccg acgaaagcaa     5100

taatcggctt ttcattatcc gctagcaaca agcgatcgcg taaagcccgt ttattgagat     5160

atttattgtc tactttttcc acgataaagg gagcggcgat atgcgggtcg atttcgggat     5220

tccagacatc ataatcgatc ccgttgacca caccgccgaa cttataatga tgcgcatgaa     5280

gggtcggttc caaaccgaat ccttgaccgc cgtctttggt ttctccggca taacgcggcg     5340

ataccgtcgt aacgaagttg gaatagacta tacctccttt catcaaattc aacgcatgcg     5400

gaatccgatt atccaacaag cgatcatcat gaaaataata ctccggtcga tgcaggcccg     5460

tcgcattcaa taagaagtcg cccgtcaacc cttgatgctt gaagttatga atcgtaaaac     5520

atactctcgg atgccagaag cctaatttct gatagatctc atataaaaac acaggcacca     5580

atgccgtttg ccaatcatgg caatgaatca catcgggatg cttgccggat ttccaaagaa     5640

attccaatgc ggcacggcaa aagaacgcat aacgcagcac gtcgtcatta aagccgtaaa     5700

tcgtgccgcg attgaagaaa ttgtccgggg aatgcggctc gatgaaaaag catttacggc     5760

catgaacgaa accgaaccag accgtacaat gaatatggcc gttataccag ggcacccaaa     5820

ggtcgtcata ggttttacat aagccccaaa tatgatcgta atgcatacaa tcgtatttgg     5880

gcaaaataat ctcgacactg tgtccgcgca attccagttc gcggcttaaa ccggtcacaa     5940

catccgccaa acctccgacc ttcgccaagg gcgccaattc aggagtaatc tgcacgacaa     6000

acatatgcgg gtagtcggga ccgggttggt catggtacgg cgaatgctcg acgtgcgaca     6060

tcatgtcggc aacgggctcc ggcgccgaag actcgggtgt cggcgctatt ggctctgcct     6120

tactataata gggttgccgc tgaaactttt ccgacggcac atcgggactg atggatgccg     6180

cctgagcaac ctctggcaaa ggcgtgataa atgccgtatt gggctcccgg tatacggatt     6240

cgccgccctt ggaagacgta tcgacttggg tttcgccggc ggtaccggac tgtttaggaa     6300

cggctttttc ggaagcttga ctaggtgcag ccgccacctt cgaagcaaca ttctctgccg     6360

ccgctgtctc gttttgcgga acaacgggta aaaccggaac aggcgacaac gactccgctt     6420

cggatttttc ctgcgccgtt ttttcggatg ttttaatctg ccgatcggat ttagtctgcg     6480

tatctgatat tttgctcgct gaattacgca ttagcgccga cttaagttcc cctgcagact     6540

tagttttcgg agaatcctta gcttctattt cggctttagc cttctcttca tccttcttag     6600

tttgagtcgg cgccttgacg ctagatgcgg tcttggtttt ttcggcaagc ttttttttgg     6660

gagcggcttt cgccttaggc ttaacggggg attttgccgt attcgcagtt tttgacgaag     6720

cctttttcac aggctctgct tgagccggtt ttgcagcctg cgctttgggt gaagatttaa     6780

cttccggcgc cgttttagct ttcggaactg ttttaggttt tgctgccgtt tcggattccg     6840

aagacaggct aggcttcggc gcatcatcgg tctgagtcga cttttccatt ttggaagatt     6900

cggctttagg gtcgttgtta accgtcgacg cggcagcgct cggctgctct tccgcctcag     6960

gcgttaccgc ggattgattc tctgtcgtcg gcttttcgga cgccttattc gttgttgctg     7020

tttttgttga gcttctggtt ttagttgtag tttgctttgc cataaatcag acctatcatg     7080

ccaattaaaa gatatacttt cccgtcgccc ttagtatttc gtgacaaata acgtccagga     7140

actatgagcc ttgttgaggg ctcggtaact tgtttaacag gactctctgc cgtcgacatc     7200

tatcaagcga ccaaccaaac ccgcctatcc tacattaaaa ttagggaagt tttatgaccg     7260

aaaccttagc ttagtatgtt gtccgcagtt gtgtttttat aagtccgaaa atcaagcatc     7320

ggaaaaatat catccatcac ttctaacgcc gtcaaatagt gttcgtttat tgtatccgta     7380

cgaacgcttt cttgcagata attaaatcga gccaaatgat caagaatacg ctttttagca     7440

tactcgacgg tcgttcctga tttcataatg aacggccaat ccgaggcctg cgccaataat     7500

aacgaccgtg ccgcctgatt caaagcccgc tcctccaagg aaaaacgggg agcttgctga     7560

aactcttcgg ctaactcctc catcaacatc gccgatttgt gtaaaacggg ataaatccaa     7620

gcattggttt cattgagcca gtatccggaa tagccctgtt cgccccaact cgatgccgaa     7680

ggcgttgcgg tttgcaagtt ttgaaaacgc gacaaataat cgctaccact gaccgactgc     7740

attcccaact tattgccgcc aaccaggcgt aataaaaact ccagccattg cggtccctcg     7800

aaccaccaat gaccaaacaa ttcagcgtcg tagggagcta caatgattgg cgatttcctc     7860

atccgatagc tcaggtcgtc aagctgccgt tgccgcttca aataaaagtc ttgggcatgt     7920

tgcctcgcct tcatcaatgc ttgacgcggc cgataggccg ctttcgggcc accccctccc     7980

gtcactcgct gatatttgat gccgacgggt acgcgaatcg tttcttccaa taaatacgga     8040

gcgagataac tctccggaat ggtggaatca taaccgatat cgcaatgata ttcacgatag     8100

tcgccgtctc ccggataccc ttcctgcgcg ctccagactt gacgcgacga ttcgggatcg     8160

cgggcaaaag ccgccacacc gttagtacag gctataggcg catagacgcc attttctgat     8220

tgcgggcttg cttgagtcaa accatggcta tcgacaaaaa aataacgaag atcggcttcg     8280

tcaagcaacg tctccaagcc cggataataa ccgcattcgg gcaaccaaaa tccttttggc     8340

ataaaaccga agcactgttt gaaagtttca acgcccatgt taatctgatt gcgcaccgca     8400

ctttcggaaa cgttcagtaa cggcaaaaaa ccgtgtgtgg ccgcgcaggt aatcaattcc     8460

aggccgccta attccgcctg ttttttgaaa gccgcaacta aatcgcaatc ataatcctcc     8520

cgataacgct gcaatgcggc cttgaaatta cgtcgatata aacgagccaa atactgatat     8580

tcagcttgct tgcgagtcct tgaaacttcc tgctcggcta atctgatcaa accttgcaaa     8640

tggcgaacat agcgctgctg caataactca tcattcaaca tcgtcaacaa ggtcggcgat     8700

agcgacagtg tcagtcgata tcgcacgcga tcccgattca agcgctcgca catgctgagc     8760

aagggcaaat aacactcggt tatcgcttcg aataaccagc gctcttcaaa aaaatgctca     8820

tactcgggat gatgtacgta aggcaaatgg gcatgtaata caatgcataa accgccccta     8880

tccatctcaa gtacctaagg aacgagcatg aaataatttc gacaacagtt gaaaggaggg     8940

ctggtcggca attcccagtt tggggatcaa aaagagtgag gaggatgctt ggcgaggact     9000

tcggctgcag ggagcagccg tcaagcctcc atgaatgggt ttacgacatc ctgtcaagcg     9060

agccgccgaa ccgacgcaaa gcctactact tgtaagagtt attttgtgca tattcttaag     9120

tgagttttat tgctattctg cagacaggat ataccggcac tcgaataact atccatatca     9180

tggagctcaa atcgttctgc tgaggtcaag tgaatcggag acgccggtga aaacgggata     9240

tcttcggcat ccggcttgct caatgtttgc cgaattttag cgtcaatatc ggcttcatta     9300

aaggctaaag gccttgttag cgcggtcacc ggcgtcatcg cagaagaagg tatactaaca     9360

ggctgcgagc gaacatatac aataaagtcc ccattactgt cgcattgacc aatcgccgcc     9420

gtataaattg caccggcaac cggcaattga attttagcat tggcgtgcgt ggataccacg     9480

ccgacatcaa accatggacg ctgatgctct tgagtatccg cccaatcaac ctgccagaac     9540

aagcgtaata ttaacggatt attcgtcgcc tgcagcagag gagtaacgcc ggcaatacgc     9600

caataggcat gaagatgata gggatctatc ggtaaaataa taagctgtgg aaaattaagc     9660

ggttcagtct gactgaattg caaaggatga taggtatgac taatggtttg actgatgtgt     9720

tgaatttctt gagacgatat agtgagctta gggttatgcc tggaatgcca atatctcatt     9780

cattttttcc tgatttcata aatcttttaa ccacattcac tgcatttgaa gggtaaccgt     9840

catatcggca tgatccatag gcggattatc ctgactgaaa ccttaaagtg tcaattcaaa     9900

ttaggctttg ccaaccagat tttggcggaa gacaacccaa gcaaaccttc ggcaaccttt     9960

gcccagctta atctcgcccg tataatttga tcgcacgcgc caaacgctga ctgtgcaatg    10020

gtaataattg atcccaagta aaacgccaca accaattgcc ttcagtcgta ccgggaatat    10080

tcatgcgatg ctcggtatct aactcaagaa tgtcctgcat cggaatgatc gcgagattcg    10140

caaccgaagc taaagcggtt tgtattagcg tatagggcat cgagctagca ggctgaccta    10200

agtattcata aacataagct tgctcttgct cactgatctg acggtaccat cctaaggtag    10260

tgtcgttatc gtgcgtgccg gtataaacga cgctgttttt atccagattg gccggtaaat    10320

aaggattact ggggccgccg ctgaacgcga attgcagaat cttcatgccc ggcaaagaga    10380

aatcgtccct gagtttttcg actttatcgg taatcacgcc taaatcttcc gcgaccaatg    10440

caataggtcc gaacgcatcg aaaaccgtct ttaacaaggc gtgccccggc gccttgaccc    10500

agcaaccatt cattgccgtg ggttcggata ccggaatctc ccaggcggcc tccaaccccc    10560

tgaagtgatc gatacgaata atatcgaaca tttcgacttg cgtcttgatt cgatcaagcc    10620

accaatggaa gccatttttt ttaagatatg accagttgta atgcggatta ccccaacgct    10680

gccccgtttc cgaaaaataa tcggggggta cccccgccac taccgacatt tcgaactgct    10740

catccagttt aaacacctcc ggatgaaccc aaacatcggc gctatcgtat gaaacgaaaa    10800

taggaatatc gccaaacaac aatacaccat ggcgcgccgc ataatcttta agttcttgcc    10860

actgtgtaaa gaatacgaat tgctcgaatt taatcgcttc aatctcagtg cttaggcgtc    10920

tggaggcttc tttaagcgcc gaaatattgc gcgatttata ccgttcaggc cattgattcc    10980

agctaagatt attgaattct tttctgagtg ctataaataa ggcgtaatca tccagccaaa    11040

actttttgtc gatacaaaat ttggtaaatt cgattttttc gtgttcggtc gcgtgcagct    11100

taaagccata atatgcgtga ttgagtaaac actcccttgc aaatgacgga ctgccgccac    11160

aatcttgaca acgctcgcca cggctcagcc agcctttgtc aaccaactta tccaagtcga    11220

tcaaagcggt attaccggca tgagcggaga tgcactgata gggagaacca tcatcatgag    11280

gcatgtttaa tggcaaagtt tgccaaaccg ttacaccgac actatttaga aagtcgacga    11340

accgataagc ttccgggccg aaattaccat tatcacgatt gcctggaagt gaagtaatgt    11400

gcaataaaat tccggcacgg cgtctatgta agatatcaat cacaaacgtc tttcctgact    11460

aaacgttttc aatacccggc ctcatcgtac cgcccatggc gggagctccg gacccctgag    11520

tgaacgataa tgccagataa gccggcggat cttctcctaa caacagatag agattactca    11580

agttcaaacg aaactgtttt tcaaagctgc tgacagcctc ccccgggttg taatcgccga    11640

accaccaaaa ccaatccgaa ccttcacaaa tagcaagctg atgctcggca agagccaact    11700

gctcctcggt caagcgcccg gtcgacacga ctttatcaaa cgcccattta gcatcgccca    11760

gcatatccca accccggttt ttatcgacat cgccgatcca ggtagaaaac gttccataga    11820

cccaactgcc agccatcaaa ttcggaagcg tttgaatttc aatgacttga tcgaggcatt    11880

cggaaaatgt tgttagctga atctcggggt gatgactcaa gcgtttataa agcgcgctga    11940

gaaagtgata accgttttgc ggaaaatact cccaagcatt ttcgccatcc atgataatcg    12000

ataccacctt atccgtagaa gtatcatgct tatggatttg ttccaagtga ttgaccaaat    12060

cggcaaccgc atcgtcggca tgccatttgg aatattcaaa tccgatcaaa tccgataagc    12120

catcgtccct aaaaaaacaa ggtataccgg ttccgctagc gcgaaacgga tgatggggac    12180

tcacgctatc gatgcctgat aatcgcaagc tgttatgcaa gacattaccg cctgttgcag    12240

cccaatcgaa accgaactcg gagagcatct ttaatgtctc ggtactgact gctccctcgg    12300

atggccaaca gcctctcggc gtgaatccga aaaatcgttt aaaggtttcg acaccatgct    12360

tcagatgcca tttcaccctt tcctcgcccc ccggataatg atccagttcg ggtagcggag    12420

catccggcat cgcctgcaat gtacttttaa tatcgattaa caaaggcata atcggatgcg    12480

cataaggcgt taccgaaagc tcgatgcgtc cttttcttgc caacgcctta tatcgacata    12540

ttgcagtgga taattgctca ccgatgacct cgacgatttc gatccgttca tgcaatgtgt    12600

agcctgaacc tttggcaatc aagcgcttga ccctgacatc ggtcagcttg acactctcgc    12660

ccatccaagc cagatgatac cacgctaaaa gatcgctgat gaattgagaa ttcatatagc    12720

tcaacgcatc atgattctgc tccatccatt cggccatttt gaccagtttc tggaaagtcg    12780

gatatcgtcc gatctgccgc tctcgattgg cacgcatgca atccttgacc agttttagcc    12840

gtgcatcggg atccgaggga atcgatgggg caaccagcgc cgccaacaac ggatctttaa    12900

atgagatgcg atcatgcaga tagcgcccca cttgcctggc ataatcctcg atctgctcta    12960

gaaggatcgg cgcaaaatta acgaccgctt tggcttccgg cgccgcttca agatgggcga    13020

tcatgtcgac ataatccttc ataacatgca aataggtcca aggcagttga aattcgccgg    13080

tttgcaaatc gcgatactca ggctgatgca tgtgccaaca tatcaccagc ttcagttttt    13140

tatctgacat agtgcctact ctgtcctaac atatccgggg tgaccaatac gactccgccc    13200

gggctgacat gaaatctttt tttatcgtcc tcgaggttct cgccgattac cgtgccttgg    13260

ggcacttcgc aacctttctc aatgattgcc ttggtaattc ggcaatgcct tgcaatattg    13320

acctcaggaa gcaccacgac atcttgtaac gtcgtataag aattaacccg gacattggaa    13380

aataacaatg agtgcctgac cttggcgccg gaaataacgc aaccgccgga caccatcgaa    13440

tcgaccgcct gcccccttct tttgtcgtcg tcgaagacaa attttgccgg cggagtttgt    13500

tcctgatagg tccaaatcgg ccaagtttta tcgtataaat tcaaatcggg cttgacgccg    13560

attaattcca tatttgccgc ccagtaggca tctatcgtac ccacatcgcg ccagtaactt    13620

tgatcgcctt gcaaattcag gaatgggtat gcactgaccc tatatttgtc gataaccgca    13680

ggaataatgt ccttgccgaa atccctgttc gagcctttgc tgtcggcatc tttgatcaac    13740

tgctcgaata aaaatgccgc attaaataca tagataccca tcgaagccaa ggctttgtcc    13800

ggcttacccg gcatcgaagg cggattggcg ggtttttcga caaatgcttt tacccgtcga    13860

ttttgatcga cgtccatgac cccgaactcg gtcgcctctt caaggcttac ctcgagacaa    13920

ccaatggtca agtccgcatt attggccaca tgatcggcaa gcatttcgcc gtagtccatt    13980

ttataaatat gatcgccggc caatatcaga acatactccg gccgacgggt tcttagaata    14040

tcgatatttt gataaaccgc atcggcagtc ccctcatacc aagacgtttc gatgcgttgt    14100

tgagccggca tcaaatcgac atattcaccg aactcgccgc gtaagaagcc ccagccttgt    14160

tgaatatgtc gaatcaaaga atcggctttg tattgcgtta aaatgccgat ttttctgatt    14220

ccggaattaa tgcaattgga taacggaaag tcgacaatcc tgaattttcc gccaaaagga    14280

actgccggct tggcacgcca atcagtcata ttttttaacc gtgagccgcg gccgcccgca    14340

agaatcaagg caattgtatt tctagttaaa tgactgacga acctgtcttg aggttggtta    14400

attgactctg acattttcat tccccttctg gaattgacta ttacatctgt tgcttaggtg    14460

gtaacattct gataaaaatc attctactac attgaggcgt ttcgaagtga aaaagcaatc    14520

caatatgccg ttgtgtaatg atttatgcaa aatcattgaa gccaaacatc atgacccttt    14580

ttccgttcta ggccgcctca gcgataacaa cctgaccaag gtaagactct atttgcctta    14640

cgccgattcg gttcgttttg ctgaaaaagg ccctgaaata cctcgactcg caaaaacgga    14700

cttttttgaa tataccgctc aggccggcga attaccagaa cattatcaaa tttcttggat    14760

cgacaaggaa ggccgacaac acaccgatta cgacccttat gactttcccg agcaattgcc    14820

ggaattcgat cgtcatttgt tcggcgaagg caaacattgg catatctacc aaaaacttgg    14880

cgcacatcga tataaggtcg acggcatcga tggcgtatta tttaccgtct gggccccaag    14940

cgcggagcgc gtcagcgtgg tcggcgattt taaccgctgg gacgggcgct gtcacttaat    15000

gcgagtgcta ggtaacagcg gggtctggga gctttttatt ccgggcctcg acgcgggctg    15060

tttatataaa ttcgaaatac tgaaccgtca aagccaagaa attttgatta aaacagaccc    15120

ttatgcccag caatatgagc atcgccctaa aaccgcttcg attgtcgtca aagaaggagc    15180

ctatcaatgg caagatgcga aatggatgac ttatcgcaaa acccgcgatt ggcttcacga    15240

accgatgtct atttacgaag tgcatttagg ctcgtggcaa cgggacgatg ccggaaattt    15300

cttgaattac cgtgaactcg ctaaacagtt aatccaatac gtcaaagaca tgggctttac    15360

ccatatcgaa ttactgccta tcaccgagca tcctttcgat gcttcatggg gttaccaatc    15420

gacgggctac ttcgccccga ccagtcgaca cggatcaccc gacgatttca gatattttat    15480

cgatctcttt catcaaaaca acatcggcat tattttggac tgggttcccg cgcattttcc    15540

gaaggacttt ttcgcactgg cgcgattcga cggtagcgcg ctctatgagc acgaagaccc    15600

ccgcaaaggc gagcatagag attggggcac cctgatcttt aacttcgggc gcaacgaagt    15660

caaaaatttc ttactggcga gcgcgatatt ttggctcgaa gaatttcacc ttgacggtct    15720

tagggtcgac gccgtcgcat cgatgcttta tctggattat tcccgcgatg aaaacgactg    15780

gattcccaac atgtatggcg gcaacgaaaa tctcgaagcc atcgcttttt tgcgcgaact    15840

caataccgta acgcatgaac aacaccccgg cacggtcgtg atggcagagg aatcgaccgc    15900

atggcctcag gtaacccgcc cgacttggac cggaggcctg ggtttttcga taaaatggaa    15960

catgggctgg atgcatgaca ttctcgatta tataagccgc gacccgatac acaggcgtta    16020

tcaccacgat caactaacct tcggcctact ttatgccttt accgagaact tcgtccttcc    16080

gttctctcat gatgaagtca ttcacggcaa aggttcgtta ctcaacagaa tgccgggaga    16140

cgaatggcga aaatttgcga atttacgcct actttatacc ttgatgttta cctacccggg    16200

taaaaaatta ttattcatgg gttgcgagtt cgggcaaggt acagagtgga atttcaacca    16260

acccctggat tggtatgtac tgcagtatcc tcaacaccaa ggtttgcaaa ctttggtcaa    16320

agatcttaat catttgtata aaaactaccc ggcacttcac caatacgact tcaatcacag    16380

cggctttgac tggatcgatt gccatgatgt cgaacaatcg attattagct accgccgcaa    16440

aggcaccaac gatgatttga tcatcatact taacttcaca ccgattgtga gagaaaacta    16500

tcatatcggc gtgccttccg aaggggttta ttttgaaatc tttaattcag actctgccta    16560

ttatgaaggt agcaacatcg gcaaccgcga gatactatcg gaaccggagc cttggatggg    16620

acaccaacaa tcgatacact tgactttacc tccgctaggc ggaatcatct tgacgaggca    16680

aacgaaagcc ataagcagct ctgctcacta aatagcgtcc tgtttgagaa agatgatcca    16740

gcgtggcatt gctcaccgca aattaactgg cgccggccta gcttataaaa aattcacttc    16800

gatatttata cgtgataggc acaactacgc gagaaatgcc cgcaaaatag aactgccgcc    16860

gccccgaacg caaacttaaa ctgattcttc aataacaccg gacgatccta caacagcaga    16920

cagtacgcca ataaacactc aatcggctat tgtggcgaaa tccacctcgg taaactcaat    16980

tctttaatat atacctagaa ccgaattttg actgccttta aatttaataa ttatgaaacg    17040

aattcttttt gttaccagtg aagcacatcc tttaataaaa accggcggct tggcagatgt    17100

ttcaagcagc ttacctaagg ctttggcgga tctaggccag gatatccgta tcatcatacc    17160

caactatcaa gctataaaaa aaaccgaaaa cgtccaacat cggtgtacgt tgagaattaa    17220

taattgcgat gtcaatattc tcgaaacccg cttgccggaa tcaaaagtga tcgtatggct    17280

gatcgattgc ccccagtttt ttggctaccc gggcaatcct tatcacgatg aatacggtaa    17340

tgcctgggca aacagcgccg atcgcttttc gctgttctgc cgcataacag tggaagtcgc    17400

gatgaataga gcctacttag attggaaacc ggagatcgtc cactgcaacg actggcaaag    17460

cggcctagtt cccgccttgt taacgctgga atacaatcgc ccggcaacca tttttacgat    17520

tcataacatg gcctatcaag ggatttttcc ctattcgacc tacaatgcgc ttaatcttcc    17580

aagacaactt tggaacccaa atgcacttga gtattacggc aacatgtcgt ttttaaaagg    17640

cggcattgct tgctccgatc gagtaacaac ggtaagtcct acctatgcca aagaaattca    17700

atcatccgag tttggttacg ggctagaagg cttgttaacc catcgcaagg aatttctaag    17760

cggcatactc aacggaaccg acaaagactg gaatcccgaa ttcgacagca acatcgtcca    17820

gcgctacagc cataaaacgc tccatcacaa acaaaccaat aaggccgcat tacaagaacg    17880

gctctcactg cctctcgagc cgtcgattcc cattttcgga ttaattagcc gtttggttga    17940

acaaaaaggt atcgacttgc tattagaatg cttgccggaa ttattaagta tgccagtaca    18000

atttgtatta ctcggtagcg gcaacaaaag cttcgaacaa cgtttatata attttgccga    18060

agcctaccct gaaaaaatgt cgattactat cggctacgat gaacaattgg ctcattggat    18120

agaagcggga agcgatattt tcttaatgcc atcgcgcttc gagccctgcg gattaaacca    18180

aatgtatagt caacgctatg gaactttgcc gatcgtaagg aaaaccggcg gcctagcaga    18240

tactgtcgtc gatgctctac cccatacgat tgacaacaaa acggcaaccg gaattacttt    18300

taatgaatcg acccccagtt cgctactgga ggccatcaag cgcgcgttga ttttatacag    18360

agtcccggaa atttggacac aactgcaaac caatgccatg aagaaagact tttcgtggaa    18420

tagtagcgct aaacaatact tatcgctcta tgaccatttg taactcgatt aaggatttgg    18480

tcgtaaataa cttccctgtt ttatggagag ttcggtaact cgattggcag gtgtcggcgg    18540

cagggcagat tttttgctcc tgcaaaatct gcattcatgc catccatggc aatcagtcgc    18600

cgcggtcaag cctacacgga cgtattcacg gcgtcctgca aagcgagtta ccgaaccctc    18660

aacaaagctc atagttccaa gacgttattt atcacgaaat cctaaggcgg gctataactc    18720

caaaaagagt tatttatctt ttaccatgaa gagcatgaag gacttgaaga tacagcattt    18780

acaattaaac gtaagtgact gtccattaac agcctatgtc atcattattg ccacttcagt    18840

ctcgccattg ttttgatatt ttttagtcat tatacctttc gcacttcaaa tttcggcagt    18900

gcctaaagag acactgggtc cctctcctaa cgctaggtga gaagctgggc tcacgacgtc    18960

ctttgacgac ccccgacgcc ggattttgat c                                   18991


<210> 17
<211> 2121
<212> DNA
<213> Methylomicrobium alcaliphilum

<400> 17
atgacgagca agaaggtttc gcattatatt cttttgatca gtgttcacgg cctgatacgc       60

ggacgagatt tagaactggg acgcgatgcc gataccggag gtcagaccaa gtatgtcgtg      120

gatttagcga gggctttagc ttatcaacct tcggtaggtc gggttgattt agcaacgcga      180

ttggttgacg atcccgaggt tggtgcagat tatcgcgaag cgcttgagcc gctggataaa      240

agcgcgcaaa tcgtccggat tccggccggc cccgaaggct atatcaagaa agaggagctt      300

tgggattatc tcgatatttt cgccgacaat ttgttggagt ggctccggca gcagacgcgt      360

atgccggacg tgattcatag ccattatgcc gacgccggct atgttggtgt gcggttgtcg      420

cttttaaccg gtatcccatt ggtgcatacc gggcattcac tgggcagaga caagctcggt      480

cgtttgcttg caatgggctt atcgagtgat ttgatcgagc agcgttatca tatttccaaa      540

agaatcagcg ccgaagagga tgtgctggcc aatgccgaat tggtcgtgac cagtacccgc      600

aacgagattg ccgaacaata cgagctctac gactattatc agccggaacg catggtcgtg      660

attccgccgg gaaccgatct ggagcagttt catcctcctg aaaacaaggt aaaaatagcc      720

ttcggcaaat cgctggagac ttttttgaat aatcctaaaa aaccgatgat tctggctttg      780

tcgcgtcctg acgaacgcaa gaacattgtt tcgttagttc atgcttacgg cgagtccccc      840

gaattacaga aattagcgaa tttagtgatc gtagccggta atcgcgacga tatccgggaa      900

atggacgaag gcgcgcaagc ggtgttgacc gaaattctat tattggtcga ttactatgat      960

ttatacggcc atattgcgat ccctaagcac cacaaacagg aggatgttcc ggatatctat     1020

cgcttggccg cgctatcgaa aggcgtgttc gtcaatccgg cattgaccga gccgttcggt     1080

ttgactttac tcgaggcggc cgcatgcgga ttgccgctgg tcgcgaccga aaacggcggc     1140

ccggtcgata ttatcggtgc ttgccataac ggtattctcg tcgatccgct agatagcagt     1200

gcgatagcga atgcgttgct ggaaatttta agtagcccga aaaaatggga aaaattttcc     1260

gaaaaaggcc ttaaaaatgt tcggaaacgc tattcctgga atacgcatgc acaaaagtat     1320

cttgagacga tacagccatt attggagcat catccggagt ttccgaaagt ggcgcgcgtg     1380

cgaggcgatt tgagctatcg cgatcgagcc gttttttccg atatcgatca aagtttattg     1440

ggcagcgccg aaggtttaaa agcatttgct gcttatttgg ccgagaatcg aaaaaaagtt     1500

tttttcggtg tcgcgaccgg ccgcaggctc gattcggcaa tggcaatttt aaagagaaac     1560

ggcctgccgg taccggatgt tttaatcacc agcttgggaa ccgaaattgt ctattcgccg     1620

caaatgacgc cggacagcgc ttgggcaaga catatcgatt atcactggaa tagcaaggcc     1680

atacgccgca ttatcgggga attgcccggt ttgactttac agcccaaaag cgagcaaagc     1740

cgatttaaga tttcctatca ttacgatgcc gagcaggcgc ctacggtaga agaaattcag     1800

acattgttgc gtcaggagga gcaggcggtc aatgtgtata tatccttcgg gcaatttttc     1860

gacatcgttc cggtgcgtgc atcgaaaggt ttggccttgc gttatttcgc ccagcagtgg     1920

aatctgccgt tggagcgtat tctagtcgcc ggcggttccg gcgccgatga agacatgatg     1980

cagggtaata ccttggcggt tgtcgtcgct aatcggcatc gcgaggaatt gtcgggtttg     2040

cgcgagcccg agaggattta ttttgcggcg caaccctttg cgctcggtat catcgaggca     2100

atagaacatt atgattttta a                                               2121


<210> 18
<211> 1956
<212> DNA
<213> Methylomicrobium alcaliphilum

<400> 18
atgtacgaac agatttcgca ttccttatta aatgaaattt tagatgatct caagccggaa       60

atccgcaggc aggatttgcg gcatttttac acgcgtctcg gcgcgaattt ttatgcgatt      120

cataatctgt ttcatcatct atacggccgc cgcgacgatt tcaaagagca aatgctcaag      180

ctggtcgaaa ccttggctcg acaatatatt cagcgaccgg aagagttgga aaaactcgat      240

atcgcgcggg aaaacgatca taactggttt ctgaatcaaa aatgggtcgg catggctttg      300

tatagcgccg ggtttgccga cgacttggcc ggcgtggcgg ataatacctc ttattttcaa      360

gagctcggca tcaatttggt gcacatcatg ccgatactcg agtgtcctac cggtcgcagc      420

gacggcggtt atgcggtcag taatttccgg cagatcgata gccgtgtcgg caaattagaa      480

gatttgcagc gggtttcaag cgagttcaga aagcgcgata ttctgttgac tttggacgtt      540

gtgttgaatc atacctcgga cgagcatgaa tgggctcagc gggcgaaggc aggagagcaa      600

aaatatcaag attattatta catcttcgat aatcgtgaaa ttcccgatat gttcgagcaa      660

agtatgcccg aaatttttcc ggaaaccgct ccgggaaatt ttacctggga cgaaactttg      720

cagaaatggg taatgacggt cttcaatgat tatcaatggg atctcaacta cagcaaccct      780

tcggtattta ttgaaatgct cgacgtgatt ctcttttgga tcaatcaagg cgccgatatt      840

atccggctcg atgcggttgc atttttatgg aagaagatgg gcacgacttg tcaaaacgaa      900

cgcgaagcgc atctgttgct gcagttgatg aaagactgtt gccaagtaac agcgccgggg      960

tctttgttca ttgccgaagc gattgtcgca ccggtcgaga ttactaaata tttcggcgag     1020

gacgcgatta tcgcgaaaga gtgtgaaatc gcctataacg cgactttgat ggccttgctt     1080

tgggatgcgt tggcgacgcg caatagcaaa ttactgtatc agggcttgaa aagcctgccc     1140

gataaattgg agcgagcgac ttggttgaat tatgtgcgtt gccatgacga tatcgggcta     1200

ggtttcgatg acaacgatgt gcggcatgtc ggttatgatc cggtcgcgca tcgtcgtttt     1260

ttggtcgatt tctatacagg ggcttatgag gattcgatcg cgagcggcgt gccgttcatg     1320

cgtaatgaga aaaccggcga tgcgcggatt gccggatcgc tggcttcgtt ggccggcctt     1380

gagacggcga ttcagtccga tgacgaacat gcgatcgata ttgcgttgaa caaaatcata     1440

ttaatgcata gcgtgatatt ttcattcggc ggccttccgc ttctgtatta cggcgatgag     1500

atcgcgacct ttaatgatca cagttatctc gatcaacccg ataaggctaa tgacagtcgc     1560

tggattcacc ggcctaagat cgattgggag cgggccgagc aacgtaagaa acaaggtacg     1620

gtcgagtatg ccgtatttag cgcattgaaa aaaatgatcg cgattcgcaa ggaaaccacg     1680

gcttttgccg acttcaataa tcgacagttg atcgaatgcg aaaacccgca tattttttcg     1740

tttatccgtt acgatcataa ccggccttcg gaacaagtgc tggtgatttg taatttcagc     1800

gaacaacctc agcgtatcaa gatggaaaaa tttaatacgg cggggtttgg catttacgga     1860

caagtcagcg atttatacac cggcaagcgt ccgactgaat tcgaccagca actggtcatt     1920

cagccgtgcc agttttattg gttaactgag tattaa                               1956


