                         SEQUENCE LISTING

<110>  Buyyarapu, Ramesh
       Ren, Ruihua
       McPherson, Mustafa
       Kumpatla, Siva P.
       Channabasavaradhya, Chandra
       Spinks, Joe
       Parliament, Kelly
 
<120>  MARKERS LINKED TO RENIFORM NEMATODE RESISTANCE

<130>  2971-P11485.2 (72022)

<150>  US 61/799,059
<151>  2013-03-15

<160>  78    

<170>  PatentIn version 3.5

<210>  1
<211>  1002
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (501)..(501)
<223>  SNP Marker DCTE1_217844_513

<400>  1
agatgacgat tccgttcagt caacagaaac agaagggccc attgattctc acgcaacaac       60

gaatgttcaa agttccttac aattggagac caggccaaga cgtcaaactc gaccatcatc      120

tcgtttgaga gattttgagg tgatacaaga tgatgttgtt gatgatgaag gagacatgat      180

tcagtttgca atgtttgcaa atgttgaccc atcatcgtat gaagaagcag cagaagaaga      240

agtgtggtgt aatgcaatga aagaagaaat gttggctatt gaagaaatgg tacatgggac      300

ttggtcgact tacctgctgg aaaagaagca atcggtttga agtgggtttt caaaacaaag      360

taccaagcag atggaaaaat acaaaaatat aaggcacggc ttgtagcgaa agggtaccgc      420

caacaacaag gaattgatta tgaagaaacg ttttctcctg tggtacgttt tgaaatagtc      480

agaattgctc tagcattggc ycgctcaatt gaaatggcct gtttttcaat ttgatgtaaa      540

gtcagcgttt ttaaacggtg agttgaagga agaggttttt gtgtcacagc catatgggtt      600

tgtaatcaaa ggcaaggaga gtaaggtata caagctgaaa aaggctcttt acggcttgaa      660

gcaagcgccg cgagcctggt acagtaagat tgatgcttat tttcaaaatt caggttttgt      720

tagaagtgaa aatgaaccta ctctttatct taaaaacaag cgaatgattt gttactagtt      780

tgtctctatg tagattatat gatttacatg gggtctatct tcttcacttg tttttgattt      840

ttaaagaaaa tatgatgaag tcttttgaga tgacagattt tgggaaagct tcattttttt      900

tctggtgtgg agatttattc aaacaggaga tggggatttt tatatcccaa aagaagtatg      960

cagctgatct cttcgaaggt ttaacatgct aaattgcaac tc                        1002


<210>  2
<211>  301
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  misc_feature
<222>  (101)..(101)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (121)..(121)
<223>  n is a, c, g, or t

<220>
<221>  mutation
<222>  (151)..(151)
<223>  SNP Marker DASCTP_66915_767

<220>
<221>  misc_feature
<222>  (288)..(288)
<223>  n is a, c, g, or t

<400>  2
agctaagtca gcatatatca taatgaaagg gattcgctcc attcttattg ctttaggcct       60

ctttgctttt gcttgctcat cggcctcagc atatgacccc nagtcctctc caggactttt      120

ngtgtagcta tcaaggacat caagaatggc rgtacgcatt caagactttg tgttaatgtt      180

catcctcatg atgttaataa agcatgagct gaacaacatt acgtttcaat gttctaatat      240

aactttttaa catttcttca ttgcagtgtt tgtaaatggt aaattttngc aaagacccaa      300

a                                                                      301


<210>  3
<211>  85
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (35)..(35)
<223>  SNP Marker DCHA20258_34

<400>  3
cagcaactgc aaatacatct ggtgctggtg cttcyatctt ggactcctat attgcggatc       60

catattatgg ccgttattct ggtga                                             85


<210>  4
<211>  742
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (501)..(501)
<223>  SNP Marker DCTE1_217106_782

<400>  4
caagaaatat actggaaact gattaaaaac ttgaaaagtt cctaccaatt tcaagaagca       60

ctttgttggc aagacgtaac cggtactttc atcctcagca cgggcaataa tgtctcgcca      120

ttcacaaagc gcctataagc catttaagtg agacataagt caaagtaatg gataccatct      180

atccatctaa ttctgcacat gaaatgtgta ccaaaattta aattggacat ttcttgtggt      240

ttatcaacca ttcgattgtt attttaaaag taaaagggtc aatcagatat gaaaacaact      300

agaacttaca gcaacaattg ctagctgctc agcattgaaa ccaccgccct gcaacctata      360

tcaaatatta caacaaatgc aaagatttag tttgaatata catcagtgat ggaatcagac      420

cggccagtta tactggtgcc tgtctggtcc agtacatacc caaaaaccag ggaaccaatg      480

aacccaaccg gagaaaacta rcttttaact tttcttttgt tatttagtaa aattattttt      540

gtaagtgatg gcatttgaac ttttaaccac ttagtgatat actaaatacc ataccattaa      600

gccaaataca tacattttat aacaaataac tacatttaaa actatttaat atcaaaatca      660

catatttaac atttaattta cattttaatt gaataatcaa gttcaaccag tgaatctgga      720

ggtcacacag gttagacctc ca                                               742


<210>  5
<211>  301
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  misc_feature
<222>  (16)..(16)
<223>  n is a, c, g, or t

<220>
<221>  mutation
<222>  (151)..(151)
<223>  SNP Marker DASCTP_42527_351

<400>  5
ggacatggta aaaaanccaa acaagattgt cttttgagcc agacattatg ttgatgtccg       60

caagagaaag agaaagtatt accatctcag ggctaagtgg agaagcaaat gcttggccag      120

ttatttcacc ttcagtaaag attgtaagtt rttgatcgtt tcttaggtgc atggggatct      180

gtcttttgat gagtagcagc caacgaaact atttgttcct gtaggctact ggagcaaccg      240

ttccggttct aaagaaacca agccatggct ttgggtcact tctggggaat gctgcctcaa      300

a                                                                      301


<210>  6
<211>  643
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (479)..(479)
<223>  SNP Marker DCTE1_391589_479

<400>  6
ttctgtgctg atacttagat atgtcccacc agacgaggtg ccacttccgt tatcacttca       60

ggagtcaatt gattcttaca agctgagaca taatagtgat gctcagatga ttaatggaga      120

aaacccagcg aagagtcctg gagatccttg tctgcctttg cttggagaaa agaatgttgc      180

agttgattgt actgttgtta gaaaaaatag aagctctatc cagttgtaag ttccttgcct      240

tatgtctact tttgatatag aaatctattt gctccttcaa tttcccgaaa gcatccttgc      300

ccgaccctca tatgcaatgc atatttggac atggtggggc gtatgattct ccaaatatat      360

gaaaaaattg gagaatatga gaatacttgt gttgggcaca tacatgtatc cgacattagc      420

ctttgagtcc aagtgacaga tacagatctt ataaaatcat tttcattagc agtatacart      480

gtcttggttt gtcacagact ttagagatgt gcttgaaggt ttttccttgc ttttatatgt      540

gcaaactgat gataagatgt aatgtaattg aatattgtga aacttcttat caaggtttca      600

atatgaaatg cttcacagtt atgaacatta ttaccatgga att                        643


<210>  7
<211>  301
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  misc_feature
<222>  (16)..(16)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (115)..(115)
<223>  n is a, c, g, or t

<220>
<221>  mutation
<222>  (151)..(151)
<223>  SNP Marker DASCTP_18966_467

<220>
<221>  misc_feature
<222>  (275)..(275)
<223>  n is a, c, g, or t

<400>  7
aaggatacaa ctagantcac tggaagtttc acgacctgaa gaacctccta ccatggaagc       60

tactgaatcg acattggaaa atatcatact gtttgaagat aatttgaaca aaaanggaaa      120

ccaataatgg taacagtagc ccagaagatg raactatgtc cctatcagaa ttatctacaa      180

gcttccaaca atgcttgcag tccatcaatg atcaaaacag aaacatggtt aaagtcgaga      240

aaccaaaaga agccattgat gttccgcaaa tgaangccat ttgattatga agcagccatg      300

a                                                                      301


<210>  8
<211>  301
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  misc_feature
<222>  (62)..(62)
<223>  n is a, c, g, or t

<220>
<221>  mutation
<222>  (151)..(151)
<223>  SNP Marker DASCTP_2912_350

<400>  8
tacgatgagt cgtcggggat ttgggaagac atatggggtg accatatgca ccatggatat       60

tnacgagccg ggttccgata tttcgggttc agatcatcgt gccgctcaga ttcgaatggt      120

cgaagaatcg ctccgttttg ctggaatatc rggttagttt tctttacata tttttcaata      180

atccacgtgt tagtttctgt tggaagatta gattatgtcg ttgaatttat cgttagcgag      240

agtagtgcca agtccaaaca tataggtgct ctttccaact gttcatgaac tggaatatct      300

g                                                                      301


<210>  9
<211>  681
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (501)..(501)
<223>  SNP Marker DCTE1_214884_1077

<400>  9
tgtatgtatg agaatgagat atgagtgaga gaaagaagag ggaaaagcaa agaagtaggc       60

accactatat tggtttgtta tttatttttc ccttgctttg cgagtgtctt tcttcctgta      120

gaaattagaa accaagtttt ctgagtgtta ggaccctttt tttggcacaa agtcaattgc      180

atctaggaaa agggttgtaa atattgtgtg attctgatgc cagacttgtt tgatattttc      240

ttttaaggtt ggttgcatga gccatatgaa ctaagttctg ggttcatagt ctttttgttt      300

gttttttggt ctttttaagt aacgcattac aggagctata cctatggcat tggcatccat      360

gaaaatttaa tggagagaca attacgtttt tgttgaaaaa atataaatat ttaaagaaaa      420

taatgtagca aaaaagatat aggcaaatgc aactcagcaa agaatgctca aattctagaa      480

aatgaaaaag aaaaatattc rattttcagc agacatgttc tgagagagag aaaagttagg      540

agggaacaga gaaagaaaag aaacaaaaag aaaaagagct aaaataaaga aaaaagagag      600

gaaatgattt ggtggtaatt tgacagaatc gatgtctaac tttgactagt gatattttct      660

ttttgtataa acttcggaat t                                                681


<210>  10
<211>  301
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  misc_feature
<222>  (8)..(8)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (31)..(31)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (111)..(111)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (142)..(142)
<223>  n is a, c, g, or t

<220>
<221>  mutation
<222>  (151)..(151)
<223>  SNP Marker DASCTP_58378_518

<220>
<221>  misc_feature
<222>  (212)..(212)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (227)..(227)
<223>  n is a, c, g, or t

<400>  10
gcatgagnca agcgattctc aattctttat naatgggaaa tggctcaaga acattgataa       60

cggtagcagc aacaacctca ttgctaatgc caaccgccct tcctcttcat nctgctgccg      120

cttacatgcg tgacaagttt tngctgtctc ycaagagaag acatgatccg tttcctcatc      180

ggttgccttg gtgcactagc tcctcttccc cntgtcctct atttccntca ctcggagttg      240

ttaacctaaa ctatagctca attgaagcct cccttccagc tgtagaagca actcaaaaac      300

a                                                                      301


<210>  11
<211>  301
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  misc_feature
<222>  (44)..(44)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (52)..(52)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (59)..(59)
<223>  n is a, c, g, or t

<220>
<221>  mutation
<222>  (151)..(151)
<223>  SNP Marker DASCTP_34272_162

<400>  11
ctgatgacgc attgtttccc ttggcaattg ctattgttga cgtnggaaag tngatgaana       60

attggatgtg gttcatgtca gagttgagga agcttcttgg tgtgaacact gaaaacatgc      120

ctagacttac tatactgtct gaaagacagc raggcatggt agatgcagta gaaacccatt      180

ttcctagtgc gtttcatggt ttttgtctac gttatgtcag tgaaaatttc cgtgatacat      240

ttaagaacac aaagttggtt aatatcttct ggaacgctgt ttatgctctc acgactgtag      300

a                                                                      301


<210>  12
<211>  407
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (123)..(123)
<223>  SNP Marker DCTE1_317552_123

<400>  12
aattcattat tcatctatcc atcatattca tcagtttatt caatccatct tccacttttt       60

attttatcgg cttttcactt ttaagaaaac aaacgagaat aaaatatgga gaaaaattac      120

ccyagtcgta caaacctcga atcctctcaa aacaaaatcc ctctctcaaa acaacattct      180

ctctttttat tctttttggt cacacctatt agggttataa tggcctttta aataggctaa      240

gattagagtt ctaatatgac tggaatatct ctggaataat caaagtttga ctgggaaaag      300

taaccctatt aaaagtgata aatgactaaa agtaacacta ttttagcctc attcttaatg      360

ctatttttgg atgtattatt cgatagtaaa atggtagtaa ttttatg                    407


<210>  13
<211>  85
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (23)..(23)
<223>  SNP Marker DCHA31095_22

<400>  13
cagccccggt taaaaagaga atytctcctg ttccagtctc tcctacagac aggcagttac       60

aaagaaagtt accaaagaaa gtaag                                             85


<210>  14
<211>  85
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (22)..(22)
<223>  SNP Marker DCHA5179_21

<400>  14
cagcaagacc atgcaatttg grtcatgagg ttgatagttt gacctagaaa aagaggtgtt       60

gaaagatgga catgtctgct acatt                                             85


<210>  15
<211>  301
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  misc_feature
<222>  (29)..(29)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (54)..(54)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (71)..(71)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (95)..(95)
<223>  n is a, c, g, or t

<220>
<221>  mutation
<222>  (151)..(151)
<223>  SNP Marker DASCTP_17253_337

<220>
<221>  misc_feature
<222>  (170)..(170)
<223>  n is a, c, g, or t

<400>  15
atatcctttt gctcgtgtac tttcaaaant gttatttgca atggagccac tacnaccaga       60

tgcaaaaatt ngagatcata atggcagaaa attantactg aaataatgca ataagggcat      120

cactaagcaa agagagagac agagaaagac rcacgcgaac tggaaccccn aaagggccaa      180

gagcatcagt gaaatcagag cttggaattg gagtacccca cttaggtatc tttctgcaaa      240

gcattagaaa tagaggttgc atgttacaag acttagctag agttttcaac ttcctggcaa      300

g                                                                      301


<210>  16
<211>  301
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  misc_feature
<222>  (2)..(2)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (12)..(12)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (20)..(20)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (26)..(26)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (38)..(38)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (66)..(67)
<223>  n is a, c, g, or t

<220>
<221>  mutation
<222>  (151)..(151)
<223>  SNP Marker DASCTP_36168_373

<220>
<221>  misc_feature
<222>  (217)..(217)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (250)..(250)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (268)..(268)
<223>  n is a, c, g, or t

<400>  16
gnatttttca antgggctgn acttgnattt tagattantg ttttaattta gtttccattt       60

tggcgnnagg ggggtggttc tgggctgcaa attggacggc aacagtgtgg caggaattgc      120

ttaacctata ggatttttgt tataccatta ytatataggt taaactcaat ccttctctta      180

tgattgaaac atttgggata agtgaaggaa atctaantgg actcaaattg agatgaatag      240

tattttttcn agtaagtgat attggggnta cactacacaa ctatagagat actttcaatt      300

t                                                                      301


<210>  17
<211>  85
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (35)..(35)
<223>  SNP Marker DCHA17412_34

<400>  17
ctgcgatccc aggatctccc ttcgcaaaga ccatytcgac taaatcgatt gtcaccctaa       60

agaaaggcca ttcattgtac atctc                                             85


<210>  18
<211>  446
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (230)..(230)
<223>  SNP Marker DCTE1_293065_230

<400>  18
aattcgacat aagaatcaac acgaaaccga cttaccaccg atgacaaacc acctctaacg       60

cgtattaaac cgttgaagtg taattcccta ctccacaatc tactcctaaa cacgaattat      120

cactaatcaa tcactacata atgttatcgc taaaatccca aaccaaaagt taacgacaat      180

tgagttctac ttaccaaacc aaaaggagaa cccaacaatt ccaacagcay gatcaaacaa      240

tggattcacg agctgaatca aaagagaaat aaaatagatg gttttcgaaa aagagaaaag      300

aaatgccaag aaggggaaaa acaaaaaaaa ttagacgtca tattttattt gaaggagaga      360

gaaattttta gaaaaataat aaaaataaaa gatatcccac atatccctta ttttactctt      420

agtaacccac taactcataa gtccct                                           446


<210>  19
<211>  301
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  misc_feature
<222>  (20)..(20)
<223>  n is a, c, g, or t

<220>
<221>  mutation
<222>  (151)..(151)
<223>  SNP Marker DASCTP_156_330

<220>
<221>  misc_feature
<222>  (162)..(162)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (181)..(181)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (187)..(187)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (205)..(205)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (239)..(239)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (291)..(291)
<223>  n is a, c, g, or t

<400>  19
tcattcctga acctggctan gtcgatcgag caatttgcaa acaagagctt cgcatgatcc       60

aggctttgta cgctccatat gtacgaggga atttgtaact acacgcataa ctcgcccttc      120

tgaatcatca gcaatgacct acatttcgtg mgttgacaaa antattaaga agtgaacaaa      180

ntataantgc aaagttacct aaatngtcaa gtggtgcaca cctctttaag ggaagggant      240

aagcaacatg gatagtggta tacatgatga tgtgatcttt gcattttctt ncatcatcac      300

t                                                                      301


<210>  20
<211>  888
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (388)..(388)
<223>  SNP Marker DCTE1_388919_388

<400>  20
agccaagtct aatggcatca ctgttagggc cttggttgta ataaatccag gcaacccaac       60

aagacaggta tcaatgaaat gctttcagaa aagtatatta taaatgaaaa aggttcctgc      120

aatttcattt ttctcatttt gattgcaggt tcttgctgag gaaaaccaga aggcaatcgt      180

ggagttctgc aaggaagaag gtcttgtttt gctagtagat gaggtaggtt gatttgcata      240

tgttcttgct ttaccattcg ttaacaatga cttcgctttc ccaaggacaa gtttgcactg      300

accttgataa cgaccttggt ttcacaggtt taccaggaga atgtttatgt tcctgaaaag      360

aaattccact cttttaagaa ggttgccyga tctatgggtt acggcgagaa ggatatacac      420

ttggtatctt ttcagtcggt ctcgaaaggt aacattggtt tatcttattt ctattatttc      480

atttatggaa tgtgaatgag cttatacaaa gtttggaatt ttgacacaga atataaactc      540

ttttactgtc tccagggtat tatggagagt gtggaaaaaa gggaaggagg ttacatggag      600

gttactgggt ttggtgctga tgtgaaggag catatataca aattagcatc tgtgaatgtg      660

tgttctaaca tcactggtca aattcttgct agtcttgtaa tgagtccacc taaggttata      720

tcttttgtca tttaaagcca gttatctgtt tgtattcaaa tgacattgga tgtatgacat      780

aggactaaat agattttgag ctttgacaag ctgcttataa acattgtttc ttatagaaga      840

aacacattat tggagaaagc ttttgaatct cccaactatt ggatttgg                   888


<210>  21
<211>  230
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  misc_feature
<222>  (6)..(6)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (38)..(38)
<223>  n is a, c, g, or t

<220>
<221>  mutation
<222>  (151)..(151)
<223>  SNP Marker DASCTP_36697_528

<400>  21
ttcttngtcg gatcaagtgg ctattactcc tttccagnca gcgttgggta gctaaaatgc       60

tcggctacaa ttttgaagtt tcttaccgaa aagggattaa caacaaagtt gcggacgctc      120

tctctcgaca accacaactt gaacatagtc rtactatcag atttcagtaa gctcagttat      180

ctcggacctc ttggtacagg tgcagcaatc ttatactcaa gacaattgac                 230


<210>  22
<211>  301
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  misc_feature
<222>  (66)..(66)
<223>  n is a, c, g, or t

<220>
<221>  mutation
<222>  (151)..(151)
<223>  SNP Marker DASCTP_36697_380

<220>
<221>  misc_feature
<222>  (154)..(154)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (186)..(186)
<223>  n is a, c, g, or t

<400>  22
ttctttagcg aagctcttag ggtgtgacat caagcattat ccatttatga aaaagaaatg       60

ctggcnagtt ttactagcag ttcgaaagtg gcatgcttac ttggttggtt gccattttaa      120

aattagtaca gatcatcaaa gtttgcgttt yttngtcgga tcaagtggct attactcctt      180

tccagncagc gttgggtagc taaaatgctc ggctacaatt ttgaagtttc ttaccgaaaa      240

gggattaaca acaaagttgc ggacgctctc tctcgacaac cacaacttga acatagtcag      300

t                                                                      301


<210>  23
<211>  578
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (114)..(114)
<223>  SNP Marker DCTE1_245250_114

<400>  23
aaaaagaagc agtagaccta agcgactacc atggaaggag ataatcgatg gtgttggttt       60

ccatctacgg taatggtttt gggtatggtg ttgtttgttt ggctgcttgg aaayatgaga      120

aattgaacat cgataatagc aatgtataac aagaaaagaa aaaaatagaa cacacagaat      180

tttacgtgga aatcctttcg aaaaaaaatc acgggcagag gaaaagaaat tcactatgtc      240

gaatttgaat gattacaacc agaaagacga ttacatctat ttataggttt aaaaaactta      300

ttctagtcaa attcaaataa aagtaatgta gtaagtttaa aatactttat tctaatcaac      360

atcaaataga tgaagtaaac ttctataggg attttgcttg tgcagccagt atcgtactac      420

gagggtcgaa ggcctccggt tgtaacccca gtctagtatt ttgcttatta gggatctacg      480

atgggctgcg gccttcgccc tatcttgcca cttgtatttt atttttaaca ggaattttgg      540

tcacacaact tctaacaatc tccaccttga cacgaatt                              578


<210>  24
<211>  301
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (151)..(151)
<223>  SNP Marker DASCTP_48698_177

<400>  24
cgcatcaagg agcttgaaac tgagtgctgg tcctcaaaga agaaacatga gcacttcttg       60

agaaaagtta gtgaggaaag agctgcgtgg cgaagcagag agcatgagaa aatacgtgca      120

tttgtcaatg atgtcaaagc tgatttgaat ygggaaaaga aaaaccggca gagacttgag      180

attgtcagtt ccaaattggt gaaagagctg gctgctgcca agttatcagc aaagcaatat      240

atgcaggact atgaaaagga aagaaaggac cgagaactaa ttgaagaagt atgcgatgag      300

c                                                                      301


<210>  25
<211>  301
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  misc_feature
<222>  (104)..(104)
<223>  n is a, c, g, or t

<220>
<221>  mutation
<222>  (151)..(151)
<223>  SNP Marker DASCTP_48698_527

<400>  25
agattccatg aagcttcgag acgaagtcga tgaggaaaga aagatgttgc agatggctga       60

ggtctggcgt gaagaacgtg tacagatgaa gctcattgat gcanaaagta gcacttgaag      120

aaaggtattc acagatgaac aagcttgttg yagatttaga tacttttcta aggtcaagga      180

ccggaactct ggatgtgaaa gatatgagag aagcagaatc acttcgacaa gctgctgctt      240

cagttaatgt ccaagaaatc aaggaatttg catatgagcc ggcaaaccct gatgacattt      300

t                                                                      301


<210>  26
<211>  301
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (151)..(151)
<223>  SNP Marker DASCTP_48698_434

<220>
<221>  misc_feature
<222>  (197)..(197)
<223>  n is a, c, g, or t

<400>  26
ggaaagaaag gaccgagaac taattgaaga agtatgcgat gagcttgcta aggaaattgg       60

agaagacaag actgaagtgg aagcattaaa gagagattcc atgaagcttc gagacgaagt      120

cgatgaggaa agaaagatgt tgcagatggc ygaggtctgg cgtgaagaac gtgtacagat      180

gaagctcatt gatgcanaaa gtagcacttg aagaaaggta ttcacagatg aacaagcttg      240

ttgcagattt agatactttt ctaaggtcaa ggaccggaac tctggatgtg aaagatatga      300

g                                                                      301


<210>  27
<211>  120
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (72)..(72)
<223>  SNP Marker DCMA76208_71

<400>  27
ctgccgaaag gaaataacaa attttattga gaaaaagaat aattttctct cacacacaac       60

atcattggac cytttttcat ctcttcatca gcagagatcg gaagagcggt tcagctcagc      120


<210>  28
<211>  590
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (377)..(377)
<223>  SNP Marker DCTE1_269021_377

<400>  28
accgttgctt tagaagccaa acctcatatt gaaccttagg aacccaccct aggtagaatt       60

actctctacc ttagtagaca cctcattagg agcttttact atttcttggt cgtattgtat      120

ttaattgata ctgatttttt gtgttttact ttgattgcat ggcatatcat tataaaggcg      180

ttggttcgtg ttcggttgct cgatagaaag tttatcatgg gaaatgggtt cttgatagaa      240

tggaggacaa tgcggctgtc caaacttggg ctgagagggc gcaacgcgaa aaaggtgata      300

gtttagccga cgggtatgta tcagaattat gagacttcac ccgtgtcatc gtagcccaga      360

acaacttgca agagttraag gaaatttggg atcaatggaa tattgaggtt agacagttat      420

ctattcaaat tataggaatt tacttatttg cttgatatga aggtagacaa gcgtctgctt      480

cgagctcttg cccaattttg gaatccagcc tatagtgctt cacgttcggg aaggttgatt      540

tggtacctac aatagaagaa aacatggcct tacttcggtg ttcgagaatt                 590


<210>  29
<211>  423
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (256)..(256)
<223>  SNP Marker DCTE1_291290_256

<400>  29
ctcctctgac aatggatatg gcttaccgtg aagtctaaac catgtcatgt aatatgaaga       60

ggacgataaa ttcggttgga caattgattc gcgcataagt ataaaatcgt acctatattt      120

ccagatgtag atatatttgg catgaaattt aggccaatct ttattggttc tctctgcaag      180

tcgatcttgt gaagttcatc gagctcttgg ggtgacgtcg gaatacttta cataaaccta      240

aactgacgca tcactyagtc raatttgtgc atctcaatca ttgtaaaaac tatcaatgac      300

actttgacgt gccatatatt tcaattcgcc aaaaattcaa tcatgatgta ttcttgaatt      360

atcggatcaa agtgtagcat tcactcaaac tatagtaaca aagttataaa ttttattacg      420

tac                                                                    423


<210>  30
<211>  85
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (30)..(30)
<223>  SNP Marker DCHA11045_29

<400>  30
ctgcctctgt gctgttatgc tctccaacay tgctaaaacg tccggaatca agccagaaat       60

agccataaca atccctaaac gatgc                                             85


<210>  31
<211>  548
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (250)..(250)
<223>  SNP Marker DCTE1_221931_250

<400>  31
tgagctacac atcttattgt caaatttgtt ctttttttaa attaaaatca tgataaaaaa       60

atagtattgt ttcaaggaag gcactaaacg ttcgaaccaa gagcaaatga ttacaatgag      120

agaacctgtt tcaaacttgt tgtaatgtaa aaggcaaggt ttctagctta atagttgatg      180

gtgagagttg tactaatatt gcaagtaaaa ttatggtgga acagctccat tttcctacaa      240

caaaagaccy tcaaatgtac aacttgcaat ggttgaatga gaatggtaaa atcaaagtca      300

ccaaacaagt gatggtctct ttctcacttg gtaagtacaa agatgaagta ctttgtgaca      360

ttgtcttgat gcaagcctgc catatctttc ttaggcgtct atggcaattc gatcgacgag      420

ttcattatga tagccatgct aatcagtaca cttttgagtg tacaaaataa gaccacctca      480

catcattgac ttcggatcaa attcgtgaaa accaagctaa gatgatgaaa ttgagagtaa      540

ttataaga                                                               548


<210>  32
<211>  349
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (78)..(78)
<223>  SNP Marker DCTE1_261396_78

<400>  32
gaatataatt ttatatataa aattaacact acattttggc gaaatcctag gaggaagcaa       60

agaagttcat gacctctycc agaaaaattc agtaccacat tggggggtat gcgagccgcg      120

ttaggtttga agttcgggat gcaagtgtca caacgcaata acttaacggg ggtgtggcag      180

caacggtttt atttgatgtt ggtggacatt ctgctatcaa tgaaatttta tatcgcaaag      240

atgttagagt tttgtacttc tcattgtcgt catctttaaa atacgaaaaa gggatatggt      300

ataatatata tacacagtaa gagttctttt aggcatgaat ttaattatt                  349


<210>  33
<211>  196
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (46)..(46)
<223>  SNP Marker DASCTP_60046_46

<400>  33
gacgctcccc attgtgggtc atccaatgtg ttgggtgggc ctgttmctgt tgaaggaaat       60

gctggcaact acagtgtcaa tggaagtaac tcgggtagta accacgcaag caatgggcca      120

catggaagta gcaccctagc cgatactgta gggacaaaca tagaaagcga taatggaata      180

gctgggaaaa gtggaa                                                      196


<210>  34
<211>  214
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (64)..(64)
<223>  SNP Marker DASCTP_4812_64

<220>
<221>  misc_feature
<222>  (153)..(153)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (203)..(203)
<223>  n is a, c, g, or t

<400>  34
ggtataatat ggcatcgaat gcaaataagt tttcctttgt caacaccgga agctcatctg       60

cacrtgatag taagatagaa ctgacaagaa aaggatcagt atgcgatgtt caatctcctt      120

tggttaatga cctttccaat cagtactcaa atngttggta gcaataacat caatatggcc      180

tctacaactg ataatgcttt tgnccaagcc agct                                  214


<210>  35
<211>  301
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  misc_feature
<222>  (11)..(11)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (103)..(103)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (130)..(130)
<223>  n is a, c, g, or t

<220>
<221>  mutation
<222>  (151)..(151)
<223>  SNP Marker DASCTP_60046_472

<220>
<221>  misc_feature
<222>  (216)..(216)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (230)..(230)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (288)..(288)
<223>  n is a, c, g, or t

<400>  35
atcgatgctt nccggaaaaa ggtatccaat gtcgacctgt tagcataatt tctgagattc       60

agagtaaatt cttctcaaca ttttgccttt ctttttccag gtnccgatat caaagtagga      120

aaaggttagn cacaacaacg acctcgtatc ygagggcaat tcgtgtgaca aacggtgaac      180

accaatgacc cctcatctga aggcaattca tccgancaaa tagcaaagan ggaaaacact      240

agaagagtcc agctgataag gtaacaagat ttgatccact cctctganta aaataccttg      300

t                                                                      301


<210>  36
<211>  85
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (32)..(32)
<223>  SNP Marker DCHA212383_31

<400>  36
cagctcctga atttatacat aggatagaag aratttactt tcatatatag agaacaaaag       60

cgaacttgca tcacatgatt aacac                                             85


<210>  37
<211>  601
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (301)..(301)
<223>  SNP Marker DC7_59671475

<400>  37
ttctaaaagg cttgtctgat gacggtgctt ggtctttgtt caaagaaata gcatttgagc       60

aaagatatgc agactcaacg aattcagcct ttgtggaaat aggaaaacag attttagaaa      120

ggtgtagtgg tgttccctta gtcataagga cgatagcaag tacattatct tacaaagaaa      180

ctgaaaagga gtggcattct tttagagata atgaacttgt tagaatatct caaaacgaag      240

gtaaaattct acctacactt tagtttagct acgatcatct cccatcccat ttgaagcatt      300

sctttgctta ttgccgactt tatccaaaag atcttgtgat tgatgtgcaa acacttgttg      360

agttttggat tgcacaaggt ttcgtaaagc aattgaatca aagtcaatct cttgaagaga      420

tcgggtttgg atattttaaa gatttagtag aacgaagctt tagctttagc tcttttgcct      480

ttctgttttg ttttttattt tttttctcag tcaattgatt acaagaaaag gcgttgggat      540

cacccaacct ataccagttc aggcaaggaa tcaaaagcag ccaaactata ccaaaacaga      600

g                                                                      601


<210>  38
<211>  85
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (23)..(23)
<223>  SNP Marker DCHA165008_22

<400>  38
cagcctctcc aatgacagac atkgtgaaat tatgagaagg aaggagaaga gagaaatgaa       60

gaagccaaaa cttgaaattc aggga                                             85


<210>  39
<211>  389
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (262)..(262)
<223>  SNP Marker DCTE1_278814_262

<400>  39
aactacatag gccctggctg gtgctcttgc ctctgactgt tgtgtaacta tgttactact       60

tctaagaaca ccttcacctc tggataccga actacctcta cctaaccctc tgcctctagt      120

agtaggcatt gatatctgag atgatgtagg tatagcacat tcactttttg gacaatctca      180

gatgaaatga tctgtggacc cgcattgaaa acaccgtcga gttatcttta aacattcgcc      240

aaagtgcttc tttccatagt gytcacagtc ggggatatca atatttcgta aaggtccctt      300

tacactacct gtagaaacag tagtctgttt accccgattt ttatcaccca gatccgatct      360

gaaacttgac ctccaattgc ctctgaatt                                        389


<210>  40
<211>  85
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (24)..(24)
<223>  SNP Marker DCHA280949_23

<400>  40
ctgccgtatt gtagctctaa caayctgagt caacattgca ttggctaacc tccgagttcc       60

cctaactcca cccatcaaaa tcgcc                                             85


<210>  41
<211>  85
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (75)..(75)
<223>  SNP Marker DCHA58490_74

<400>  41
cagcattatc aacttcatca ccaattattg cttctctatc ttcgtctctt gaaaatgtag       60

agataaaagt agtcmtgttc gaaca                                             85


<210>  42
<211>  843
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (501)..(501)
<223>  SNP Marker DCTE1_214911_694

<400>  42
gtatgtatag ttttagtaaa taatactaag ggtttgaact tgattttgat tttctgggtt       60

tcttgattgg attttgtttg attgttttta caagaattgg tgccacatgt tagagagatt      120

ggaagcttgt attgcttgta atgggagatt gttgatctcc tttgaatgac tgagttgaat      180

tgttcaataa aatcaagatt gacgagttat gttgtgtcaa cttttgaatt aatttgtctt      240

gtcaagacag aaccatcaat gctcatgcat aaaatccaat ggttctaggc tgatgtttct      300

agcttgtact cagcgttgtt tgtttcctta gagtctaaga aaaactgata agcaaagaga      360

atattagata tgcaatggtt gataccgtgc atgaaaagag aagatatttt gtgctgcaac      420

atgtaaccaa aggtatctcc ttagcaacct tcattatttt ggttccatca actcggtatc      480

aggtgcgctt cccaacaatc ycagcagggt gcactctatc ttcaagcagg gcaccatgga      540

caccagtgag tgctcgggtg cgaggaggcc gaaatgcaga tccttttttg ggtggcctca      600

atatcctcct gttggcaagc actacaacag ccggcaaaag catgcatgaa ccaatacaac      660

ataaattaag tctaccagcc aagtaactcc tggctgcagc aatgagaggt ttggtttata      720

aaaaggcaac gccttcgcca cgacgagagg tttggttgag gaaattagga tgaactcgta      780

ttgaaagaag caatggtggt gtggttgcct ttccaaagcc gaaatggttt cttatacaga      840

gct                                                                    843


<210>  43
<211>  531
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (501)..(501)
<223>  SNP Marker DCTE1_233925_865

<400>  43
ttcattttca tttcattttt ttttataaaa attcgattca aaaaattagt ttcgacaacc       60

tattaatcca atttagacta ataactattg taagttctct ttaaacaaaa aaattcaata      120

aattaataaa taacaaaaat aattaagtaa aagtgaaaaa atggcaaaaa agtcattcaa      180

tctctcgctt tttgtctttc aattagaccg ttgcagagtc tcaaatcact tttttaatat      240

caaacttaaa aacacaatgt attccagagt gaaccttcaa gtttcattta aaaatgggag      300

agacaagtga acctctgcgg caaacccctg aaccaaactc tgcttctttg gagtctctgt      360

tccatgttct cgaccctatt tctctcattc ataattcaag ccccggtaac ccaattcctt      420

taaggcttac aacagagagt tctataatgg aaaggggtcc cagatatgga gcttatgcag      480

agctaagaga aacaaagctg rgaatgaaga gtgggatgat gcaacaagaa a               531


<210>  44
<211>  85
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (57)..(57)
<223>  SNP Marker DCHA162845_56

<400>  44
cagcattggc tctacaaatt gattgggttc gacttcgaag tattatacag accaggraag       60

ttaaatacag tggccgacgc cttat                                             85


<210>  45
<211>  120
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (25)..(25)
<223>  SNP Marker DCMA55989_24

<400>  45
cagcaatggc acccaaaaat gccaraaacg tccaaggaca cctaaaataa gtatcataac       60

ctttagctga gatcggaaga gcggttcagc aggaatgccg agaccgatct cgtatcgtat      120


<210>  46
<211>  567
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (126)..(126)
<223>  SNP Marker DCTE1_232591_126

<220>
<221>  misc_feature
<222>  (524)..(524)
<223>  n is a, c, g, or t

<400>  46
aaaaaagttc aggccccaat ttgcgaacaa ttgccaagtt caatgactaa cttagacaaa       60

aaaaaatttc aagcaccaat gtgggaacaa ttattaagtt caggccccaa atagtgcatt      120

aaccamaaaa aaaggtgaac caaaatagat atgcagaaag ccaaacctat atgtgtgcat      180

gaatgcactt gtgaacttgg acatgtgtct tatggtatat ttccctaata aggctaaagg      240

tagtttcatt ttcatggatg ggtaagagac ctctagattt gtaaatcact gaagggaaag      300

aaattaccca tgagaatatg tcatcttctg ctgagcttga cgcaggactc atcgggctct      360

ggctgtgagc tgtccatcgt tgttctatag gagcaggagc aggtaactca ttcgtctcaa      420

tgagtttctt tagctcttca atgtactcaa ggtccttcat actaggcttg gaaagagttc      480

cagcaggaaa acaggtttct gatacccatt gttggccccc caanaatcaa agcccaagat      540

atcatcactc catccaactc gatatcc                                          567


<210>  47
<211>  85
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (20)..(20)
<223>  SNP Marker DCHA153168_19

<400>  47
cagcaccgcc gtttgcaccr ccaccgccgg acccttgcat tctcttcaaa tagaggcgat       60

atttctgtaa atgactagcg acgtt                                             85


<210>  48
<211>  120
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (80)..(80)
<223>  SNP Marker DCMA93983_79

<400>  48
cagcttcaaa ttgaaggatg gaggggtgat gccaagtttc cgagttggct ttctttgctc       60

acaaatctcg tcagaatttr cataagtggt agtaatttca aacatctccc gtcctgtcct      120


<210>  49
<211>  85
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (34)..(34)
<223>  SNP Marker DCHA224779_33

<400>  49
ctgcaaggtt tcttggaagg tacgctgtct gctycgtctc ggtttattgt gtctccagaa       60

ggtgctctta ttccgaatcc agaag                                             85


<210>  50
<211>  374
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (69)..(69)
<223>  SNP Marker DCTE1_365870_69

<400>  50
aaattaggcc acttgcagag cttaatgtga tgagcatctt ctgtcccttt acaagtaaac       60

aaagctcgrt gcttcttaaa caagataacc tttgaaagtt gaataattgg aacccaatgt      120

gactactgga ttccgggagt tccttggacc aaaagtggaa aaacctcagc agctgtacaa      180

agtccccagc ttgaagactg gatagattag ataggtgtca tttataggct gtactgacac      240

cataaacaat attttgataa aacctaaacc aaaatatcct atacacaatg ccaaattata      300

cagaaatgaa agcaaatata gagctatact ttgttcatgg aaacaaatca ccttaattct      360

ttgttctttt tttc                                                        374


<210>  51
<211>  357
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (223)..(223)
<223>  SNP Marker DCTE1_271930_223

<400>  51
aattctcctc cattctattt gctcttcttt gctcttgtgc atagagaaca tttatcagct       60

ttgtcaaggg tatagctgat aggtccctag agtcctccaa agaagagatt tttgactcat      120

acttctctgg aagagttgta atgacttttt caactatcct tttgtcactg aactaatcct      180

caagaagcct tatgtttttt actgtagcca taatcctgtc agmatactag ttgatggttt      240

ctgactcttt catcttcaga ttctcgaagt cccttctcag gtttatcaac tgctactgcc      300

tggtcttatc tgacccttga actcttcctt gagtctgtcc caagcctact ttggagt         357


<210>  52
<211>  990
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (501)..(501)
<223>  SNP Marker DCTE1_208529_965

<400>  52
agcgttgcct gccttccaag gatccctaaa attaggcctt aactttctct ccacaagcat       60

ccttggtccg tagactggtg actcctctgg tctatcatct tccaccatca ccgccatatc      120

cgccatagag tgtttcgcat aagccctgga agcccccttg ttcttgttgg agttggaatc      180

ctcaattgta aaagtcgctg tatcaaatat ttcgaccatt aatcaaacaa taacagaaac      240

ttaactaaat aggagaaaaa atcaatttgt acgaaagggc tagtgaagta gtttacacaa      300

ttattgcttc tttcctgatc ggcccgttat aaaattcaaa aagttttgaa tccttttagg      360

tgcggccctt cttcctctgt ttccacgtcg atatcacgtt ttcgttttac aagggaagtg      420

ctgcctgcgg atccatcgtt ttcagtagag tgatgatgga tatgttccaa gtttggagaa      480

gattgaatgg tatggcactg yagctcttyt atttcttcca aatctttctc atacattatt      540

ctaacaccac acttcttcac cttaacagaa ggataccttt ttggagaaga ttggaaagac      600

atctcaagcg ataaatcctt ggcttcacat ttatccttta atgataatgg cgagaaatat      660

cgaagaaaaa ggtggtcctt ctttatgcgt cgtccacaaa aattaaggaa actggaatcg      720

accattcgac tattttaact tgaaaaacag atccattact actagattgt ccagaatatc      780

tagaatggat ataagttgga ccaccgataa cctttatctc ggaaccatca tcatcaccga      840

aaatgcagca gaaagcaact ccaatacatt gactgtcatt ctgaatattg agaggcaaag      900

gtatttcgat tacagagccg cctctctgtt ggctgaacca ttctgggatt tcatttccag      960

gtataacagc atcaaatctt ttcttgaatt                                       990


<210>  53
<211>  85
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (53)..(53)
<223>  SNP Marker DCHA6086_52

<400>  53
cagcaaccga cgtgattttt gcccactaca acatatatta gttttaaggg caytttattt       60

ttaaattttt caaaaaatgc tgggc                                             85


<210>  54
<211>  301
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (151)..(151)
<223>  SNP Marker DASCTP_39375_356

<400>  54
aggatacctc taccactcaa tattcagaat gatagtcaat ggattggagt agcttcctgt       60

tgcatttttg tcaatgatga tgcttcccgg gataagttta tcaactgcag agctgttatc      120

cattgtagaa attctggaca aggcggtcga ratggatctg tcttccgaga tacagatctt      180

cgacgtgtcg atgcaagtag ttggttgttt gggaaacgtt ttaaccagcc cataacgaag      240

gatcacctat ttcttagata ttggtcgcgt gataaattat atccattttc cttagaggat      300

a                                                                      301


<210>  55
<211>  458
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (347)..(347)
<223>  SNP Marker DCTE1_240643_347

<400>  55
attacctgat ctacacgcaa cacagtgcag gcagcatctg cagcatattt gagagcaaaa       60

aacctgacaa aaaaagtcaa caattgtaaa ttataaaaga atcagaggtt aattttcgat      120

gcaaaagaga acagaactga gccagaaata attgtaaata gcgacttact tagtgacata      180

aaggtcccaa acattcacgg ttgagacatc cttgcaaaca caatcctcag agtcatctcc      240

cctcaagtcg atgcccactt tagcattccc agatgcatgc ttttcataca agttagaaat      300

aatatccatt ggtttgagtc cagcattctc tgccagggtt ctcggtrcca attcaaaact      360

ttcagcaaac ttagcaatgg catactgatc caatctgcaa aatatcccgt agttaatatt      420

aatagcttct tctagtactc atctaatcta ctataaat                              458


<210>  56
<211>  301
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  misc_feature
<222>  (140)..(140)
<223>  n is a, c, g, or t

<220>
<221>  mutation
<222>  (151)..(151)
<223>  SNP Marker DASCTP_59246_191

<220>
<221>  misc_feature
<222>  (292)..(292)
<223>  n is a, c, g, or t

<400>  56
aggggttgag ttaatgattt taccgcaaat gataaccgtg ttagttgatt ttacgagtgc       60

agaagacttc agctgtgaca tcgagtctga tggaaaagtg ctaatcaaag ggataacaac      120

aaccggtgag aaagttgtan gtcaagaact ytcaagtctt tcatatgctc acacaaaatt      180

tatgcccatc tggacacttc actgtttcat tcgagctacc gggccctgtc gatcccgaaa      240

aagttactag ttgtttagct aatggattgc ttgaagccgt tgtgaagaaa anggtaactg      300

a                                                                      301


<210>  57
<211>  601
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (301)..(301)
<223>  SNP Marker DC7_56573714

<400>  57
gaaattaacc agttttaaaa ttccacaaat tagttatata ttttttaaat aatttatttt       60

tcacttacat gttcctgtca tagcatatta acccattgaa taataacacg accttttttt      120

attaactttt gattaaagta tagacaactc tttataattt gtcaaaaaca ttttgtttga      180

ttcaaatata ggattttttt tatcgaatcc atacatatta ccgcatcacc ttcgacttca      240

atgtcactac caccatcaga taccacccca acatagaaag acgacaatgt tgcctgcaaa      300

macaataaat gaaggattca agcttgactt atggaagaac caactcaacc aagtagctgc      360

ttttgcttgc ttacgctgta gctaagacag tgagggttgt agttgcagtt gtagccataa      420

gggaagggtt tgggtgtagt gaagtccatg ttgaagcagt gatcgttgac catcagagct      480

tgggtggtgt tgctttagac aggggacgac tctattactt ccagagttgt tctgctcttg      540

gtcttgggtt tccattttcg gatcctcatg cttgtaatct agatccaaac acagatcctc      600

a                                                                      601


<210>  58
<211>  301
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  misc_feature
<222>  (57)..(57)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (73)..(73)
<223>  n is a, c, g, or t

<220>
<221>  mutation
<222>  (151)..(151)
<223>  SNP Marker DASCTP_28910_164

<400>  58
agcgttacct tcttgttttc ggtgggagtt cacatgctac tttcttcaat gatttgncat       60

gtccttgatt tgncaaactg taagataatt acacttttca gttttctcat ttgcttgtct      120

gaggaattaa tttctttatc tttccttctt ytttttttct ttcttttttt tggtatttgg      180

atttgtagat ggaatggtca aaacctgcac aactaggtga gttaccaact cctagagctg      240

gtcatgcagg agtgactatt ggggaaaact ggtttattgc tggaggtgga gacaacaaaa      300

g                                                                      301


<210>  59
<211>  601
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (301)..(301)
<223>  SNP Marker DC7_56523319

<400>  59
aattcacttt acttccttca ctgctacttc cattatttgc aacatcagtt ggaatgcctt       60

ttgtagtgca gtttttagtg agaggaggtc cgcaaagatg attgcccacg taagacaagt      120

ttgcaaagct ttgaagttga gtacttgttg ggatttgtcc tgtcaaattg ttgtacgaca      180

cattgaagtg attcaagaaa ttcaatttgg agaaacttgg agggatttca ccatttagtc      240

gattcatggc caaatcaaga gattccaaaa acttcatgtt gccaatgttg tctggtatat      300

wtcctgttag gtgattccct gagaaattta aagacaatag tccaacgaga ctaccaattt      360

ctttggggat ctctcctgtg aaactgttaa cagaaaggtc caagttggta acaagtccta      420

gtgtgtgacc atattcatcc tctcgccctt tcaacaccaa taaggcactc aaataaaatg      480

ggtaattaat gaaatacagc gtagaaagtt catttttggt tttgtttgtt gtggccattg      540

cacttaaatt attgaagcat tttggaataa ctcctgaaat gttgttgtgg gcaaggtcca      600

a                                                                      601


<210>  60
<211>  597
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (97)..(97)
<223>  SNP Marker DCTE1_240981_97

<400>  60
aaattctgag cctgaggaga cccttcccca gaccctcctg gagacatttg ggcaaccgag       60

atggcatcgg atgagacctg cttgatgaat ccagagrcag tacccaacag ttcagaaggc      120

tgagcctgag gagaccctcc ctcaaaccct cctggagttt gggcagccga gatggcatcg      180

gaagagatct gcttgatgag tccagaggca gtgcccgaca gtccagaatg ctgaacctga      240

ggaggccctc ccccagctgc tcctggagac atttgtgcag ccgagatagc ttcagatgag      300

acatcctaga caattggaag gacaaaacga tcaatgtcag ttacagattc actaaccggc      360

aattataaga agaagatgag gaagaagaat tgttgtatct cctttcattt gctagacatc      420

atcaaatttt tggatactct ttattaatca aaccttcgaa ctaaaaggtt ttgtaatttc      480

agtttaaatc cacagttttc caactcaacc acaaacttcc ccgaagattt aactgttcca      540

aaaggctttg aaatcacaaa ttttcaatgg tatattaata tcatagtacc aacaata         597


<210>  61
<211>  339
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (63)..(63)
<223>  SNP Marker DCTE1_317966_63

<400>  61
aattcaggaa cttctttaaa accttttgat ctaacggtgg agaaaaacag cttcttttgc       60

rwrgtttggt ggataaaaag taggtctagg tgttgggagg gcaaatgcgg ttgattttct      120

ctatctagtc tgcttttttt cttgtttggc taccgagaaa aattttgttc ttgtttctgt      180

ttctgggtct tttggtttta gtgaaggaga agtagaggga ataaaaaaaa acaaaacaga      240

gaagagatct ttttggtggt ttcttaattt gggttgaaga aaagatgaca acaaaatcag      300

ttgaagtaag gtttaatttt ctttttttct tttagggtt                             339


<210>  62
<211>  301
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (151)..(151)
<223>  SNP Marker DASCTP_1656_527

<220>
<221>  misc_feature
<222>  (192)..(192)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (200)..(200)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (212)..(212)
<223>  n is a, c, g, or t

<220>
<221>  misc_feature
<222>  (245)..(245)
<223>  n is a, c, g, or t

<400>  62
gtgccggaat ggcacccgcc attcccgaaa cttctgcatg aaaatcgtaa aactatgaaa       60

aattacatta aaaaaggctt aaatatcaag aaagaagagc caaaatatta cttaattcat      120

ttggaatttg tcccttcctc cccatttccg kacataattg ttctacggga actttcgctg      180

ctaatttagg tngatttagn agattttggg tncctaagga atgcaccgaa cttctagctt      240

ttgtngcatt ccttcacggc tgtcatccca gaacagtcta attctactga ttcgccacta      300

t                                                                      301


<210>  63
<211>  293
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  misc_feature
<222>  (82)..(82)
<223>  n is a, c, g, or t

<220>
<221>  mutation
<222>  (151)..(151)
<223>  SNP Marker DASCTP_51689_504

<220>
<221>  misc_feature
<222>  (220)..(220)
<223>  n is a, c, g, or t

<400>  63
aatatggaat caaagttcat acagattgct ttatatgcaa ggtattgtaa cacaaagtaa       60

aaacaggaag ggaaaacaaa anggagtcaa ttttggccat ctatctactc aataagctta      120

aaaaactcac ctagtcctgg aactgccaag rgtgagttct aggtcatccg atccgcaatc      180

ttcatgaatc ctctctcctt cccacggttt cacgagtccn tgttgcattg cttccaaatg      240

cgaactcgtc tgatataact tcagacattg gaacatcagc cgtatgatct gat             293


<210>  64
<211>  585
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (286)..(286)
<223>  SNP Marker DCTE1_237093_286

<400>  64
aaatttatca taataatttt tttccgtgtt ttaaagaaaa atcggtttca acgttgtgat       60

cgaaataatt aacaatatta actatttaga ctaactaatg atattataaa gtagagggac      120

caaattatat aaaaaaacat taaagtatat agattaaccc tcgagtttca gcataacata      180

ggaaccaaaa ctaaaatttg gccattctct tttaagttaa aaattaaaac atagagatta      240

aatcgtaaat taagacataa taaaaaggcc aaaactaaaa tttggycatg aatctataat      300

aaaagtaaca ccacagcatg aggtgccatg tgccaacaga gggaaggtcc tttacaactt      360

ctatataatt aattagtaaa tggaaacttt tggggtaggt ttattttttt taatgggatt      420

aggtttatta ccatttaatc atgtttgcca taattgaaaa aaaaggatta ataattatat      480

tatgttgaaa ttttaatttt agttttaatg atcaaatttt aatttacaat tattttaagt      540

agtaaaaaaa ttctaaataa aatttaaaga ctcacttata gaatt                      585


<210>  65
<211>  120
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (29)..(29)
<223>  SNP Marker DCMA26817_28

<400>  65
cagcaattga ccacaatatt cattacacyc aagcttcagt tgagttaaat tactaaatac       60

atgcaaacct gaagtgttta caccgcagag atcggaagag cggttcagca ggaatggaat      120


<210>  66
<211>  120
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (60)..(60)
<223>  SNP Marker DCMA156739_59

<400>  66
ctgcggtgta aacacttcag gtttgcatgt atttagtaat ttaactcaac tgaagcttgr       60

gtgtaatgaa tattgtggtc aattgctgag atcggaagag cggttcagca ggaatggaat      120


<210>  67
<211>  301
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  misc_feature
<222>  (101)..(101)
<223>  n is a, c, g, or t

<220>
<221>  mutation
<222>  (151)..(151)
<223>  SNP Marker DASCTP_8602_418

<400>  67
gcttaccaag ctgacaaact tcacaaacag tatcattgac ctcaaccttg gacatgtcct       60

caaccaagtt cagcctgtgc aacagatcaa gtgacctaaa nttggcgcgg cctaatctcc      120

tatgccaaag accaatgcta tcagcaagac kagtataagc ctttctctca atttgactca      180

catcaagcat aaaacaccta ttaatcatag ttactataac tagctcctaa ccaaatgagt      240

ctttaacaat gcacgaacca tctctaaaga ccaaagtgta tcattttaca ctaactgact      300

a                                                                      301


<210>  68
<211>  301
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  misc_feature
<222>  (23)..(23)
<223>  n is a, c, g, or t

<220>
<221>  mutation
<222>  (151)..(151)
<223>  SNP Marker DASCTP_8602_496

<220>
<221>  misc_feature
<222>  (267)..(267)
<223>  n is a, c, g, or t

<400>  68
gcaacagatc aagtgaccta aanttggcgc ggcctaatct cctatgccaa agaccaatgc       60

tatcagcaag acgagtataa gcctttctct caatttgact cacatcaagc ataaaacacc      120

tattaatcat agttactata actagctcct raccaaatga gtctttaaca atgcacgaac      180

catctctaaa gaccaaagtg tatcatttta cactaactga ctaacactaa gtaagttctg      240

gtctatgtca ggcacaaaaa gcacatncag aaattacttt gttacctgaa ctagagttga      300

t                                                                      301


<210>  69
<211>  624
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (124)..(124)
<223>  SNP Marker DCTE1_214869_124

<400>  69
tgtcatacat aagtcatgca cctaatgtac taacttttgg cttcgatatc aatggagcat       60

taactttcaa tacatcgaag cacatgagtt aggtactagg ggcgagtatt caatcgagtt      120

gagkcaaatc aagtaaaaaa aatttcgagt ttgttgagtt gatgaatcct attttagcaa      180

ctgaactcaa tttaaatttt tcgaatcgaa tcgaatctag tcaaaaaatt tcgagtcaag      240

tcgagtcgag ttaacgaatc ctattattga tactcaatgt tgcgtttaca tggatcgatt      300

atttaactag tagacgaagt acgagattat ttaactacat aaacaataca attgttttgt      360

cttttaattt aatgggtcaa cgtttatcaa aataacgtag ttttgccttt caacttaatg      420

gttttgactt ttaactttta aaaaagtaaa catttatcaa aacgacatag ttttggcttt      480

tcttattcgg attttcggat aactcgaatt gtgtaattca tattcaagtt aaaccgaaaa      540

acttaatttt ttattcgagt tgatctgaat aacttgatta actcaaataa ctcgaactat      600

ttaattcaaa attaaatttt ttat                                             624


<210>  70
<211>  219
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  misc_feature
<222>  (61)..(61)
<223>  n is a, c, g, or t

<220>
<221>  mutation
<222>  (151)..(151)
<223>  SNP Marker DASCTP_10515_611

<400>  70
ttaatccact agcaagggca gttgcaaaag aatgcggcgg tttgccatta gctctcaaaa       60

ncggttggga agtcaatgag gaacaaaaga aggattgagt tgtggaaaca cgcacttcac      120

catttgcagc attcagaccc tcacgtcaaa macatcgagg acgaagtcta tcgtcgttta      180

aagttgagtt acgactcatt gccaagtaag atcctgcag                             219


<210>  71
<211>  274
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  misc_feature
<222>  (116)..(116)
<223>  n is a, c, g, or t

<220>
<221>  mutation
<222>  (151)..(151)
<223>  SNP Marker DASCTP_10515_556

<400>  71
gctgcttgga atttgtttgc tcaaaatgct ggtgatgtgg ttgaagtacc aagcattaat       60

ccactagcaa gggcagttgc aaaagaatgc ggcggtttgc cattagctct caaaancggt      120

tgggaagtca atgaggaaca aaagaaggat ygagttgtgg aaacacgcac ttcaccattt      180

gcagcattca gaccctcacg tcaaacacat cgaggacgaa gtctatcgtc gtttaaagtt      240

gagttacgac tcattgccaa gtaagatcct gcag                                  274


<210>  72
<211>  301
<212>  DNA
<213>  Gossypium sp.


<220>
<221>  mutation
<222>  (151)..(151)
<223>  SNP Marker DASCTP_10515_498

<220>
<221>  misc_feature
<222>  (174)..(174)
<223>  n is a, c, g, or t

<400>  72
tgtctgccga gcaatgatga cagatgaaga gatcaagtta gatgttctaa aacaagaagc       60

tgcttggaat ttgtttgctc aaaatgctgg tgatgtggtt gaagtaccaa gcattaatcc      120

actagcaagg gcagttgcaa aagaatgcgg yggtttgcca ttagctctca aaancggttg      180

ggaagtcaat gaggaacaaa agaaggattg agttgtggaa acacgcactt caccatttgc      240

agcattcaga ccctcacgtc aaacacatcg aggacgaagt ctatcgtcgt ttaaagttga      300

g                                                                      301


<210>  73
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  oligonucleotide primer

<400>  73
catgtccaat ggatgtgtca                                                   20


<210>  74
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  oligonucleotide primer

<400>  74
gggccactta aaggcattct                                                   20


<210>  75
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  oligonucleotide primer

<400>  75
acatttccac ccaagtccaa                                                   20


<210>  76
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  oligonucleotide primer

<400>  76
aatcgttgac agcactgcac                                                   20


<210>  77
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  oligonucleotide primer

<400>  77
tcatggaaca ccaaagttgg a                                                 21


<210>  78
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  oligonucleotide primer

<400>  78
acatgataga ttattcagca atgca                                             25


