                         SEQUENCE LISTING

<110>  Makarov, et al.
 
<120>  Enhanced Adapter Ligation

<130>  31595/48485A PC

<150>  US 61/947,235
<151>  2014-03-03

<150>  US 61/952,854
<151>  2014-03-13

<160>  26    

<170>  PatentIn version 3.5

<210>  1
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide

<400>  1
aatgatacgg cgaccaccga gatctacact ctttccctac acgacgctct tccgatct         58


<210>  2
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide


<220>
<221>  misc_feature
<222>  (22)..(22)
<223>  3' C3 spacer (IDT)

<400>  2
agatcggaag agcgtcgtgt ag                                                22


<210>  3
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide


<220>
<221>  misc_feature
<222>  (1)..(1)
<223>  5' Phosphorylation (IDT)

<220>
<221>  misc_feature
<222>  (58)..(58)
<223>  3' C3 spacer (IDT)

<400>  3
agatcggaag agcgtcgtgt agggaaagag tgtagatctc ggtggtcgcc gtatcatt         58


<210>  4
<211>  19
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide


<220>
<221>  misc_feature
<222>  (19)..(19)
<223>  3'- Dideoxythymidine  (TriLink)

<400>  4
acacgacgct cttccgatc                                                    19


<210>  5
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide


<220>
<221>  misc_feature
<222>  (20)..(20)
<223>  3' Phosphorylation (IDT)

<400>  5
acacgacgct cttccgatct                                                   20


<210>  6
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide


<220>
<221>  misc_feature
<222>  (1)..(1)
<223>  5' Phosphorylation (IDT)

<400>  6
tgtacctcac ttctcatcac tgct                                              24


<210>  7
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide

<400>  7
agcagtgatg agaagtgagg taca                                              24


<210>  8
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide


<220>
<221>  misc_feature
<222>  (1)..(1)
<223>  5' Phosphorylation (IDT)

<400>  8
tgtacctcac ttctcatcac tgct                                              24


<210>  9
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide


<220>
<221>  misc_feature
<222>  (1)..(1)
<223>  5' 6-carboxyfluorescein (IDT)

<400>  9
agcagtgatg agaagtgagg taca                                              24


<210>  10
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide

<400>  10
tgtacctcac ttctcatcac tgct                                              24


<210>  11
<211>  34
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide

<400>  11
gtgactggag ttcagacgtg tgctcttccg atct                                   34


<210>  12
<211>  34
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide


<220>
<221>  misc_feature
<222>  (34)..(34)
<223>  3' 6-carboxyfluorescein (IDT)

<400>  12
tgtacctcac ttctcatcac tgctgtcatc cgat                                   34


<210>  13
<211>  46
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide


<220>
<221>  misc_feature
<222>  (46)..(46)
<223>  3' C3 spacer (IDT)

<400>  13
agcagtgatg agaagtgagg tacaagatcg gaagagcgtc gtgtag                      46


<210>  14
<211>  33
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide

<400>  14
gactggagtt cagacgtgtg ctcttccgat ctt                                    33


<210>  15
<211>  65
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide

<400>  15
caagcagaag acggcatacg agatcgtgat gtgactggag ttcagacgtg tgctcttccg       60

atctt                                                                   65


<210>  16
<211>  65
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide


<220>
<221>  misc_feature
<222>  (1)..(1)
<223>  5' C3 spacer (IDT)

<220>
<221>  misc_feature
<222>  (1)..(1)
<223>  Phosphorothioated base

<220>
<221>  misc_feature
<222>  (2)..(2)
<223>  Phosphorothioated base

<220>
<221>  misc_feature
<222>  (65)..(65)
<223>  n is a, c, g, or t

<400>  16
caagcagaag acggcatacg agatcgtgat gtgactggag ttcagacgtg tgctcttccg       60

atctn                                                                   65


<210>  17
<211>  64
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide


<220>
<221>  misc_feature
<222>  (1)..(1)
<223>  5' Phosphorylation (IDT)

<220>
<221>  misc_feature
<222>  (62)..(62)
<223>  Phosphorothioated base

<220>
<221>  misc_feature
<222>  (63)..(63)
<223>  Phosphorothioated base

<220>
<221>  misc_feature
<222>  (64)..(64)
<223>  3' C3 spacer (IDT)

<400>  17
agatcggaag agcacacgtc tgaactccag tcacatcacg atctcgtatg ccgtcttctg       60

cttg                                                                    64


<210>  18
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide


<220>
<221>  misc_feature
<222>  (20)..(20)
<223>  2', 3'- Dideoxythymidine  (TriLink)

<400>  18
agacgugugc ucutccgatc                                                   20


<210>  19
<211>  58
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide


<220>
<221>  misc_feature
<222>  (1)..(1)
<223>  5' C3 spacer (IDT)

<220>
<221>  misc_feature
<222>  (1)..(1)
<223>  Phosphorothioated base

<220>
<221>  misc_feature
<222>  (2)..(2)
<223>  Phosphorothioated base

<400>  19
aatgatacgg cgaccaccga gatctacact ctttccctac acgacgctct tccgatct         58


<210>  20
<211>  59
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide


<220>
<221>  misc_feature
<222>  (1)..(1)
<223>  5' C3 spacer (IDT)

<220>
<221>  misc_feature
<222>  (1)..(1)
<223>  Phosphorothioated base

<220>
<221>  misc_feature
<222>  (2)..(2)
<223>  Phosphorothioated base

<220>
<221>  misc_feature
<222>  (59)..(59)
<223>  n is a, c, g, or t

<400>  20
aatgatacgg cgaccaccga gatctacact ctttccctac acgacgctct tccgatctn        59


<210>  21
<211>  64
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide


<220>
<221>  misc_feature
<222>  (1)..(1)
<223>  5' Phosphorylation (IDT)

<220>
<221>  misc_feature
<222>  (62)..(62)
<223>  Phosphorothioated base

<220>
<221>  misc_feature
<222>  (63)..(63)
<223>  Phosphorothioated base

<220>
<221>  misc_feature
<222>  (64)..(64)
<223>  3' C3 spacer (IDT)

<400>  21
agatcggaag agcacacgtc tgaactccag tcacgccaat atctcgtatg ccgtcttctg       60

cttg                                                                    64


<210>  22
<211>  35
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide


<220>
<221>  misc_feature
<222>  (18)..(18)
<223>  Int 1',2'-Dideoxyribose (dSpacer)

<400>  22
aggtcaggta ctaggttttt cctagtacct gacct                                  35


<210>  23
<211>  36
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide


<220>
<221>  misc_feature
<222>  (18)..(18)
<223>  Int 1',2'-Dideoxyribose (dSpacer)

<220>
<221>  misc_feature
<222>  (36)..(36)
<223>  n is a, c, g, or t

<400>  23
aggtcaggta ctaggttttt cctagtacct gacctn                                 36


<210>  24
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide

<400>  24
aatgatacgg cgaccaccga gatc                                              24


<210>  25
<211>  21
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide

<400>  25
caagcagaag acggcatacg a                                                 21


<210>  26
<211>  64
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetic oligonucleotide


<220>
<221>  misc_feature
<222>  (1)..(1)
<223>  5' Phosphorylation (IDT)

<220>
<221>  misc_feature
<222>  (62)..(62)
<223>  Phosphorothioated base

<220>
<221>  misc_feature
<222>  (63)..(63)
<223>  Phosphorothioated base

<220>
<221>  misc_feature
<222>  (64)..(64)
<223>  3' C3 spacer (IDT)

<400>  26
agatcggaag agcacacgtc tgaactccag tcactgacca atctcgtatg ccgtcttctg       60

cttg                                                                    64


