                               SEQUENCE LISTING

<110> BANGLADESH JUTE RESEARCH INSTITUTE
 
<120> NUCLEOTIDE SEQUENCE ENCODING HOMEOBOX-LEUCINE ZIPPER PROTEIN 
      HAT22 (HD-ZIP PROTEIN 22) FROM CORCHORUS OLITORIUS AND CORCHORUS 
      CAPSULARIS AND METHODS OF USE

<130> JGX-009.25

<140> PCT/US2014/066772
<141> 2014-11-21

<150> 61/908,444
<151> 2013-11-25

<160> 10    

<170> PatentIn version 3.5

<210> 1
<211> 1296
<212> DNA
<213> Corchorus olitorius

<400> 1
caccccccta attaacactc cttcctctca tttcctctct aagaattttt ttttaaaaaa       60

aattacaacc cttttccttg tttcctcctt agcatcaaca ttttcttgct cgctaccaac      120

attttctcag gtttgaagtt tgaaactacc atgggttttg atgatatttg taacactggc      180

cttggtcttg gactaggctg ccttgtgaag caagaaaagt attcgcagtc tgatcatcag      240

cagcaaaaga agaagaaatt gttcttgaaa gatgatcagt ttttcccatc tcttacttta      300

ggtccatcag atgacatata ccaattatct cctgctaata aaattcatgg ggaatcaact      360

gatttgcacc aacaacaaca agcctcttct ataagtggag tatcttcatt ttctaactct      420

agtgtcaaga aggagaaaga tatttgtggt gaagaggtag aattggaaag aatgtcttca      480

agggtcagtg atgaagatga tgaaggcagc cccaggaaga aacttcggct tagcaaagaa      540

caagctgcca ttttagaaga cagcttcaaa gaacacagca ctctcaatcc tgtaaatcat      600

cttcccttgt ccttttaata tgttatttca tgttttatat acaattttat tgcatataat      660

cttaatattt acttgtttct attgttaaca gaaacagaag caggctttag cagaacatct      720

gaatcttagg ccacggcaag tggaagtatg gttccaaaac aggagagcca ggttaatttt      780

cctttcaatt ttgaccctat attcatagct tggccttata tgagtttatt cccttacttt      840

ggattctctt tttgaaacaa caggacaaag ctgaaacaga ctgaagtaga ttgtgagtta      900

ctgaagaaat gttgtgagac attaacagaa gagaacaaac ggttgcagaa ggaactgcag      960

gagcttaaat cattgaaatt gacagcatct tattatatgc agctgccggc ggccaccctc     1020

accatgtgcc cttcctgtga gagggttgcc ggcgccggtg aaggtccttc cagtacaagc     1080

ccttttacaa ttggacagaa atctcacttc ttcaacccct tcactcaccc atctgcagca     1140

tgctaggcaa cttgttgatg aggccatagg aacagtgcta tatttttgtt ctaggcttta     1200

tttatgtatg tcaaaattat atatatgatc agtatggagt aattaaatct taaagtataa     1260

gtaggctaat atctttatat ttcttgtata aattaa                               1296


<210> 2
<211> 804
<212> DNA
<213> Corchorus olitorius

<400> 2
atgggttttg atgatatttg taacactggc cttggtcttg gactaggctg ccttgtgaag       60

caagaaaagt attcgcagtc tgatcatcag cagcaaaaga agaagaaatt gttcttgaaa      120

gatgatcagt ttttcccatc tcttacttta ggtccatcag atgacatata ccaattatct      180

cctgctaata aaattcatgg ggaatcaact gatttgcacc aacaacaaca agcctcttct      240

ataagtggag tatcttcatt ttctaactct agtgtcaaga aggagaaaga tatttgtggt      300

gaagaggtag aattggaaag aatgtcttca agggtcagtg atgaagatga tgaaggcagc      360

cccaggaaga aacttcggct tagcaaagaa caagctgcca ttttagaaga cagcttcaaa      420

gaacacagca ctctcaatcc taaacagaag caggctttag cagaacatct gaatcttagg      480

ccacggcaag tggaagtatg gttccaaaac aggagagcca ggacaaagct gaaacagact      540

gaagtagatt gtgagttact gaagaaatgt tgtgagacat taacagaaga gaacaaacgg      600

ttgcagaagg aactgcagga gcttaaatca ttgaaattga cagcatctta ttatatgcag      660

ctgccggcgg ccaccctcac catgtgccct tcctgtgaga gggttgccgg cgccggtgaa      720

ggtccttcca gtacaagccc ttttacaatt ggacagaaat ctcacttctt caaccccttc      780

actcacccat ctgcagcatg ctag                                             804


<210> 3
<211> 267
<212> PRT
<213> Corchorus olitorius

<400> 3
Met Gly Phe Asp Asp Ile Cys Asn Thr Gly Leu Gly Leu Gly Leu Gly 
1               5                   10                  15      


Cys Leu Val Lys Gln Glu Lys Tyr Ser Gln Ser Asp His Gln Gln Gln 
            20                  25                  30          


Lys Lys Lys Lys Leu Phe Leu Lys Asp Asp Gln Phe Phe Pro Ser Leu 
        35                  40                  45              


Thr Leu Gly Pro Ser Asp Asp Ile Tyr Gln Leu Ser Pro Ala Asn Lys 
    50                  55                  60                  


Ile His Gly Glu Ser Thr Asp Leu His Gln Gln Gln Gln Ala Ser Ser 
65                  70                  75                  80  


Ile Ser Gly Val Ser Ser Phe Ser Asn Ser Ser Val Lys Lys Glu Lys 
                85                  90                  95      


Asp Ile Cys Gly Glu Glu Val Glu Leu Glu Arg Met Ser Ser Arg Val 
            100                 105                 110         


Ser Asp Glu Asp Asp Glu Gly Ser Pro Arg Lys Lys Leu Arg Leu Ser 
        115                 120                 125             


Lys Glu Gln Ala Ala Ile Leu Glu Asp Ser Phe Lys Glu His Ser Thr 
    130                 135                 140                 


Leu Asn Pro Lys Gln Lys Gln Ala Leu Ala Glu His Leu Asn Leu Arg 
145                 150                 155                 160 


Pro Arg Gln Val Glu Val Trp Phe Gln Asn Arg Arg Ala Arg Thr Lys 
                165                 170                 175     


Leu Lys Gln Thr Glu Val Asp Cys Glu Leu Leu Lys Lys Cys Cys Glu 
            180                 185                 190         


Thr Leu Thr Glu Glu Asn Lys Arg Leu Gln Lys Glu Leu Gln Glu Leu 
        195                 200                 205             


Lys Ser Leu Lys Leu Thr Ala Ser Tyr Tyr Met Gln Leu Pro Ala Ala 
    210                 215                 220                 


Thr Leu Thr Met Cys Pro Ser Cys Glu Arg Val Ala Gly Ala Gly Glu 
225                 230                 235                 240 


Gly Pro Ser Ser Thr Ser Pro Phe Thr Ile Gly Gln Lys Ser His Phe 
                245                 250                 255     


Phe Asn Pro Phe Thr His Pro Ser Ala Ala Cys 
            260                 265         


<210> 4
<211> 1317
<212> DNA
<213> Corchorus capsularis

<400> 4
ctcaaacaag ttcctaatta acactccttc ctctcatttc ctctctaaga aaaaaaaaat       60

acaacccatt tccttgtttc ctccttagca tcaagattaa ttttcttgct agctaccaac      120

atttttctag gtttgaagtt tgaaactacc atgggttttg atgatatttg taacactggc      180

cttaatcttg gactcggatg ccttgtgaag caagaaaagt attcgccgtc cgatcatcag      240

cagcaaaaga agaagaaatt gttgttgaaa gatgatcagt ttttcccatc tcttacttta      300

ggtccatcag atgacatata ccaattatct gctgctaata aattagctca tggggaatca      360

attgatttgc accaacaaca acaagcctct tctatcagtg gagtatcttc attttctaac      420

tctagtgtca agaaggagaa agatatttgt ggtgaagagg tagaattgga gagaatgtct      480

tcaagggtca gtgatgaaga tgatgaaggc agccccagga agaaacttcg gcttagcaaa      540

gaacaagctg ccattttaga agacagcttc aaagaacaca gcactctcaa tcctgtaaat      600

catcttctaa ttaattccct tgtctttttc tatatcattt catgttttat attaatttta      660

ttgcacataa tcttaatatt tacttgtttc tcatgttaac agaaacagaa gcaggcttta      720

gcagaacatc tgaatcttag gccacggcaa gtggaagtat ggttccaaaa caggagagcc      780

aggttaattt tcctttcaat tttgaccata tattatatac atagcttggc cttgtatgat      840

tttatattat tctcttactt tggattctct ttttgaaaca acaggacaaa gctgaaacag      900

actgaagtag attgtgagtt actgaagaaa tgttgtgaga cattaacaga agagaacaaa      960

cggttgcaga aggaactgca ggagcttaaa tcattgaaat tgacaacatc ttattatatg     1020

cagctgccgg ctgccaccct caccatgtgc ccttcctgtg agagggttgc cggcaccggt     1080

gaaggccctt ccagtacaag cccttttaca attggacaga aatctcactt cttcaacccc     1140

ttcactcacc catcagccgc atgctaggca acttgttgat gaggccatag gaacagtgct     1200

atttttgttc taggcttttt atttatgtca aatatatata tgatcagtat ggagtaatta     1260

aatcctgaag tattataagt aggctaatat ctttatattt cttgtataaa ttaagat        1317


<210> 5
<211> 807
<212> DNA
<213> Corchorus capsularis

<400> 5
atgggttttg atgatatttg taacactggc cttaatcttg gactcggatg ccttgtgaag       60

caagaaaagt attcgccgtc cgatcatcag cagcaaaaga agaagaaatt gttgttgaaa      120

gatgatcagt ttttcccatc tcttacttta ggtccatcag atgacatata ccaattatct      180

gctgctaata aattagctca tggggaatca attgatttgc accaacaaca acaagcctct      240

tctatcagtg gagtatcttc attttctaac tctagtgtca agaaggagaa agatatttgt      300

ggtgaagagg tagaattgga gagaatgtct tcaagggtca gtgatgaaga tgatgaaggc      360

agccccagga agaaacttcg gcttagcaaa gaacaagctg ccattttaga agacagcttc      420

aaagaacaca gcactctcaa tcctaaacag aagcaggctt tagcagaaca tctgaatctt      480

aggccacggc aagtggaagt atggttccaa aacaggagag ccaggacaaa gctgaaacag      540

actgaagtag attgtgagtt actgaagaaa tgttgtgaga cattaacaga agagaacaaa      600

cggttgcaga aggaactgca ggagcttaaa tcattgaaat tgacaacatc ttattatatg      660

cagctgccgg ctgccaccct caccatgtgc ccttcctgtg agagggttgc cggcaccggt      720

gaaggccctt ccagtacaag cccttttaca attggacaga aatctcactt cttcaacccc      780

ttcactcacc catcagccgc atgctag                                          807


<210> 6
<211> 268
<212> PRT
<213> Corchorus capsularis

<400> 6
Met Gly Phe Asp Asp Ile Cys Asn Thr Gly Leu Asn Leu Gly Leu Gly 
1               5                   10                  15      


Cys Leu Val Lys Gln Glu Lys Tyr Ser Pro Ser Asp His Gln Gln Gln 
            20                  25                  30          


Lys Lys Lys Lys Leu Leu Leu Lys Asp Asp Gln Phe Phe Pro Ser Leu 
        35                  40                  45              


Thr Leu Gly Pro Ser Asp Asp Ile Tyr Gln Leu Ser Ala Ala Asn Lys 
    50                  55                  60                  


Leu Ala His Gly Glu Ser Ile Asp Leu His Gln Gln Gln Gln Ala Ser 
65                  70                  75                  80  


Ser Ile Ser Gly Val Ser Ser Phe Ser Asn Ser Ser Val Lys Lys Glu 
                85                  90                  95      


Lys Asp Ile Cys Gly Glu Glu Val Glu Leu Glu Arg Met Ser Ser Arg 
            100                 105                 110         


Val Ser Asp Glu Asp Asp Glu Gly Ser Pro Arg Lys Lys Leu Arg Leu 
        115                 120                 125             


Ser Lys Glu Gln Ala Ala Ile Leu Glu Asp Ser Phe Lys Glu His Ser 
    130                 135                 140                 


Thr Leu Asn Pro Lys Gln Lys Gln Ala Leu Ala Glu His Leu Asn Leu 
145                 150                 155                 160 


Arg Pro Arg Gln Val Glu Val Trp Phe Gln Asn Arg Arg Ala Arg Thr 
                165                 170                 175     


Lys Leu Lys Gln Thr Glu Val Asp Cys Glu Leu Leu Lys Lys Cys Cys 
            180                 185                 190         


Glu Thr Leu Thr Glu Glu Asn Lys Arg Leu Gln Lys Glu Leu Gln Glu 
        195                 200                 205             


Leu Lys Ser Leu Lys Leu Thr Thr Ser Tyr Tyr Met Gln Leu Pro Ala 
    210                 215                 220                 


Ala Thr Leu Thr Met Cys Pro Ser Cys Glu Arg Val Ala Gly Thr Gly 
225                 230                 235                 240 


Glu Gly Pro Ser Ser Thr Ser Pro Phe Thr Ile Gly Gln Lys Ser His 
                245                 250                 255     


Phe Phe Asn Pro Phe Thr His Pro Ser Ala Ala Cys 
            260                 265             


<210> 7
<211> 20
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      primer

<400> 7
tcttgctcgc taccaacatt                                                   20


<210> 8
<211> 20
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      primer

<400> 8
gcactgttcc tatggcctca                                                   20


<210> 9
<211> 23
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      primer

<400> 9
acccatttcc ttgtttcctc ctt                                               23


<210> 10
<211> 21
<212> DNA
<213> Artificial Sequence

<220>
<223> Description of Artificial Sequence: Synthetic
      primer

<400> 10
gcactgttcc tatggcctca t                                                 21


