SEQUENCE LISTING

<110> SMITH, JULIANNE
SCHARENBERG, ANDREW
GALETTO, ROMAN

<120> RNA BASED METHOD TO OBTAIN STABLY INTEGRATED RETROVIRAL VECTORS 

<130>

<160> 46

<170> PatentIn version 3.5

<210>  1

<211>  1955
<212>  DNA
<213>  artificial sequence

<220>
<223>  Description of artificial sequence: Synthetic polynucleotide

<220>
<223>  FV_Gag_HCO_Seq

<400>  1
ccatggccag cggcagcaac gtggaggaat acgagctgga cgtggaggcc ctggtggtga     60
tcctgcggga ccggaacatc ccccggaacc ccctgcacgg cgaggtgatc ggcctgcggc    120
tgaccgaggg gtggtggggc cagatcgagc ggttccagat ggtgcggctg atcctgcagg    180
acgacgacaa cgagcccctg cagcggccca gatacgaggt gatccagagg gccgtgaacc    240
cccacaccat gttcatgatc agcggccctc tggccgagct gcagctggcc ttccaggacc    300
tggacctgcc cgagggcccc ctgagattcg gccccctggc caacggccac tacgtgcagg    360
gcgaccccta cagcagcagc taccggcccg tgactatggc cgagaccgcc cagatgaccc    420
gggacgagct ggaagatgtg ctgaacaccc agagcgagat cgagatccag atgatcaacc    480
tgctggaact gtacgaggtg gagaccaggg ccctgcggag gcagctggcc gagcggagca    540
gcacaggcca gggcggcatc agccctggcg cccctagaag cagacccccc gtgagcagct    600
tcagcggcct gcccagcctg cctagcatcc ccggcatcca ccccagagcc cccagccccc    660
ccagagccac ctccaccccc ggcaacatcc cttggagcct gggcgacgac aaccccccct    720
ccagcagctt ccctggcccc agccagccca gagtgagctt ccaccccggc aatcccttcg    780
tggaggaaga gggccaccgg cccagaagcc agagccggga gcggcggaga gagatcctgc    840
ctgcccccgt gcctagcgcc cctcccatga tccagtacat ccccgtgccc cctccccctc    900
ccatcggcac cgtgatcccc atccagcaca tcagaagcgt gaccggcgag ccccccagaa    960
accccagaga gatccccatc tggctgggcc ggaacgcccc agccatcgac ggcgtgttcc   1020
ccgtgaccac ccccgacctg cggtgccgga tcatcaacgc catcctgggc ggcaacatcg   1080
gcctgagcct gacccctggc gactgcctga cctgggacag cgccgtggcc accctgttca   1140
tccggaccca cggcaccttc cccatgcacc agctgggcaa cgtgatcaag ggcatcgtgg   1200
accaggaagg cgtcgccacc gcctacaccc tgggcatgat gctgtccggc cagaactacc   1260
agctggtgtc cggcatcatc cggggctacc tgcccggaca ggccgtggtg accgccctgc   1320
agcagcggct ggatcaggaa atcgacgacc agaccagagc cgagaccttc atccagcacc   1380
tgaacgccgt gtacgagatc ctgggcctga atgccagggg ccagagcatc cgggccagcg   1440
tgacccccca gcccaggccc agccggggca gaggcagagg ccagaacacc tcccggccca   1500
gccagggacc cgccaacagc ggcagaggcc ggcagagacc cgccagcggc cagtccaacc   1560
ggggcagcag cacccagaac cagaaccagg acaacctgaa ccagggcggc tacaacctgc   1620
ggcccaggac ctaccagccc cagagatatg gcggcggacg gggcaggcgg tggaacgaca   1680
acaccaacaa ccaggaaagc cggcccagcg accagggcag ccagaccccc aggcccaacc   1740
aggccggctc cggcgtgagg ggcaaccaga gccagacacc ccggcctgcc gccggaagag   1800
gcggcagggg caatcacaac cggaaccaga gaagcagcgg agccggcgac agcagagccg   1860
tgaacaccgt gacccagagc gccacctcca gcaccgatga aagcagcagc gccgtgaccg   1920
ccgcctctgg cggcgaccag cgggactgac tcgag                              1955


<210>  2

<211>  1947
<212>  RNA
<213>  artificial sequence

<220>
<223>  Description of artificial sequence: Synthetic polynucleotide


<220>
<223>  FV_Gag_HCO_Seq

<400>  2
auggccagcg gcagcaacgu ggaggaauac gagcuggacg uggaggcccu gguggugauc     60
cugcgggacc ggaacauccc ccggaacccc cugcacggcg aggugaucgg ccugcggcug    120
accgaggggu gguggggcca gaucgagcgg uuccagaugg ugcggcugau ccugcaggac    180
gacgacaacg agccccugca gcggcccaga uacgagguga uccagagggc cgugaacccc    240
cacaccaugu ucaugaucag cggcccucug gccgagcugc agcuggccuu ccaggaccug    300
gaccugcccg agggcccccu gagauucggc ccccuggcca acggccacua cgugcagggc    360
gaccccuaca gcagcagcua ccggcccgug acuauggccg agaccgccca gaugacccgg    420
gacgagcugg aagaugugcu gaacacccag agcgagaucg agauccagau gaucaaccug    480
cuggaacugu acgaggugga gaccagggcc cugcggaggc agcuggccga gcggagcagc    540
acaggccagg gcggcaucag cccuggcgcc ccuagaagca gaccccccgu gagcagcuuc    600
agcggccugc ccagccugcc uagcaucccc ggcauccacc ccagagcccc cagccccccc    660
agagccaccu ccacccccgg caacaucccu uggagccugg gcgacgacaa cccccccucc    720
agcagcuucc cuggccccag ccagcccaga gugagcuucc accccggcaa ucccuucgug    780
gaggaagagg gccaccggcc cagaagccag agccgggagc ggcggagaga gauccugccu    840
gcccccgugc cuagcgcccc ucccaugauc caguacaucc ccgugccccc ucccccuccc    900
aucggcaccg ugauccccau ccagcacauc agaagcguga ccggcgagcc ccccagaaac    960
cccagagaga uccccaucug gcugggccgg aacgccccag ccaucgacgg cguguucccc   1020
gugaccaccc ccgaccugcg gugccggauc aucaacgcca uccugggcgg caacaucggc   1080
cugagccuga ccccuggcga cugccugacc ugggacagcg ccguggccac ccuguucauc   1140
cggacccacg gcaccuuccc caugcaccag cugggcaacg ugaucaaggg caucguggac   1200
caggaaggcg ucgccaccgc cuacacccug ggcaugaugc uguccggcca gaacuaccag   1260
cugguguccg gcaucauccg gggcuaccug cccggacagg ccguggugac cgcccugcag   1320
cagcggcugg aucaggaaau cgacgaccag accagagccg agaccuucau ccagcaccug   1380
aacgccgugu acgagauccu gggccugaau gccaggggcc agagcauccg ggccagcgug   1440
accccccagc ccaggcccag ccggggcaga ggcagaggcc agaacaccuc ccggcccagc   1500
cagggacccg ccaacagcgg cagaggccgg cagagacccg ccagcggcca guccaaccgg   1560
ggcagcagca cccagaacca gaaccaggac aaccugaacc agggcggcua caaccugcgg   1620
cccaggaccu accagcccca gagauauggc ggcggacggg gcaggcggug gaacgacaac   1680
accaacaacc aggaaagccg gcccagcgac cagggcagcc agacccccag gcccaaccag   1740
gccggcuccg gcgugagggg caaccagagc cagacacccc ggccugccgc cggaagaggc   1800
ggcaggggca aucacaaccg gaaccagaga agcagcggag ccggcgacag cagagccgug   1860
aacaccguga cccagagcgc caccuccagc accgaugaaa gcagcagcgc cgugaccgcc   1920
gccucuggcg gcgaccagcg ggacuga                                       1947



<210>  3

<211>  648
<212>  PRT
<213>  artificial sequence

<220>
<223>  Description of artificial sequence: Synthetic polypeptide


<220>
<223>  Gag_engineered sequence

<400>  3
Met Ala Ser Gly Ser Asn Val Glu Glu Tyr Glu Leu Asp Val Glu Ala 
1               5                   10                  15      


Leu Val Val Ile Leu Arg Asp Arg Asn Ile Pro Arg Asn Pro Leu His 
            20                  25                  30          


Gly Glu Val Ile Gly Leu Arg Leu Thr Glu Gly Trp Trp Gly Gln Ile 
        35                  40                  45              


Glu Arg Phe Gln Met Val Arg Leu Ile Leu Gln Asp Asp Asp Asn Glu 
    50                  55                  60                  


Pro Leu Gln Arg Pro Arg Tyr Glu Val Ile Gln Arg Ala Val Asn Pro 
65                  70                  75                  80  


His Thr Met Phe Met Ile Ser Gly Pro Leu Ala Glu Leu Gln Leu Ala 
                85                  90                  95      


Phe Gln Asp Leu Asp Leu Pro Glu Gly Pro Leu Arg Phe Gly Pro Leu 
            100                 105                 110         


Ala Asn Gly His Tyr Val Gln Gly Asp Pro Tyr Ser Ser Ser Tyr Arg 
        115                 120                 125             


Pro Val Thr Met Ala Glu Thr Ala Gln Met Thr Arg Asp Glu Leu Glu 
    130                 135                 140                 


Asp Val Leu Asn Thr Gln Ser Glu Ile Glu Ile Gln Met Ile Asn Leu 
145                 150                 155                 160 


Leu Glu Leu Tyr Glu Val Glu Thr Arg Ala Leu Arg Arg Gln Leu Ala 
                165                 170                 175     


Glu Arg Ser Ser Thr Gly Gln Gly Gly Ile Ser Pro Gly Ala Pro Arg 
            180                 185                 190         


Ser Arg Pro Pro Val Ser Ser Phe Ser Gly Leu Pro Ser Leu Pro Ser 
        195                 200                 205             


Ile Pro Gly Ile His Pro Arg Ala Pro Ser Pro Pro Arg Ala Thr Ser 
    210                 215                 220                 


Thr Pro Gly Asn Ile Pro Trp Ser Leu Gly Asp Asp Asn Pro Pro Ser 
225                 230                 235                 240 


Ser Ser Phe Pro Gly Pro Ser Gln Pro Arg Val Ser Phe His Pro Gly 
                245                 250                 255     


Asn Pro Phe Val Glu Glu Glu Gly His Arg Pro Arg Ser Gln Ser Arg 
            260                 265                 270         


Glu Arg Arg Arg Glu Ile Leu Pro Ala Pro Val Pro Ser Ala Pro Pro 
        275                 280                 285             


Met Ile Gln Tyr Ile Pro Val Pro Pro Pro Pro Pro Ile Gly Thr Val 
    290                 295                 300                 


Ile Pro Ile Gln His Ile Arg Ser Val Thr Gly Glu Pro Pro Arg Asn 
305                 310                 315                 320 


Pro Arg Glu Ile Pro Ile Trp Leu Gly Arg Asn Ala Pro Ala Ile Asp 
                325                 330                 335     


Gly Val Phe Pro Val Thr Thr Pro Asp Leu Arg Cys Arg Ile Ile Asn 
            340                 345                 350         


Ala Ile Leu Gly Gly Asn Ile Gly Leu Ser Leu Thr Pro Gly Asp Cys 
        355                 360                 365             


Leu Thr Trp Asp Ser Ala Val Ala Thr Leu Phe Ile Arg Thr His Gly 
    370                 375                 380                 


Thr Phe Pro Met His Gln Leu Gly Asn Val Ile Lys Gly Ile Val Asp 
385                 390                 395                 400 


Gln Glu Gly Val Ala Thr Ala Tyr Thr Leu Gly Met Met Leu Ser Gly 
                405                 410                 415     


Gln Asn Tyr Gln Leu Val Ser Gly Ile Ile Arg Gly Tyr Leu Pro Gly 
            420                 425                 430         


Gln Ala Val Val Thr Ala Leu Gln Gln Arg Leu Asp Gln Glu Ile Asp 
        435                 440                 445             


Asp Gln Thr Arg Ala Glu Thr Phe Ile Gln His Leu Asn Ala Val Tyr 
    450                 455                 460                 


Glu Ile Leu Gly Leu Asn Ala Arg Gly Gln Ser Ile Arg Ala Ser Val 
465                 470                 475                 480 


Thr Pro Gln Pro Arg Pro Ser Arg Gly Arg Gly Arg Gly Gln Asn Thr 
                485                 490                 495     


Ser Arg Pro Ser Gln Gly Pro Ala Asn Ser Gly Arg Gly Arg Gln Arg 
            500                 505                 510         


Pro Ala Ser Gly Gln Ser Asn Arg Gly Ser Ser Thr Gln Asn Gln Asn 
        515                 520                 525             


Gln Asp Asn Leu Asn Gln Gly Gly Tyr Asn Leu Arg Pro Arg Thr Tyr 
    530                 535                 540                 


Gln Pro Gln Arg Tyr Gly Gly Gly Arg Gly Arg Arg Trp Asn Asp Asn 
545                 550                 555                 560 


Thr Asn Asn Gln Glu Ser Arg Pro Ser Asp Gln Gly Ser Gln Thr Pro 
                565                 570                 575     


Arg Pro Asn Gln Ala Gly Ser Gly Val Arg Gly Asn Gln Ser Gln Thr 
            580                 585                 590         


Pro Arg Pro Ala Ala Gly Arg Gly Gly Arg Gly Asn His Asn Arg Asn 
        595                 600                 605             


Gln Arg Ser Ser Gly Ala Gly Asp Ser Arg Ala Val Asn Thr Val Thr 
    610                 615                 620                 


Gln Ser Ala Thr Ser Ser Thr Asp Glu Ser Ser Ser Ala Val Thr Ala 
625                 630                 635                 640 


Ala Ser Gly Gly Asp Gln Arg Asp 
                645             


<210>  4

<211>  648
<212>  PRT
<213>  Human foamy virus

<220>
<223>  Gag (Genbank: CAA68996.1)

<400>  4
Met Ala Ser Gly Ser Asn Val Glu Glu Tyr Glu Leu Asp Val Glu Ala 
1               5                   10                  15      


Leu Val Val Ile Leu Arg Asp Arg Asn Ile Pro Arg Asn Pro Leu His 
            20                  25                  30          


Gly Glu Val Ile Gly Leu Arg Leu Thr Glu Gly Trp Trp Gly Gln Ile 
        35                  40                  45              


Glu Arg Phe Gln Met Val Arg Leu Ile Leu Gln Asp Asp Asp Asn Glu 
    50                  55                  60                  


Pro Leu Gln Arg Pro Arg Tyr Glu Val Ile Gln Arg Ala Val Asn Pro 
65                  70                  75                  80  


His Thr Met Phe Met Ile Ser Gly Pro Leu Ala Glu Leu Gln Leu Ala 
                85                  90                  95      


Phe Gln Asp Leu Asp Leu Pro Glu Gly Pro Leu Arg Phe Gly Pro Leu 
            100                 105                 110         


Ala Asn Gly His Tyr Val Gln Gly Asp Pro Tyr Ser Ser Ser Tyr Arg 
        115                 120                 125             


Pro Val Thr Met Ala Glu Thr Ala Gln Met Thr Arg Asp Glu Leu Glu 
    130                 135                 140                 


Asp Val Leu Asn Thr Gln Ser Glu Ile Glu Ile Gln Met Ile Asn Leu 
145                 150                 155                 160 


Leu Glu Leu Tyr Glu Val Glu Thr Arg Ala Leu Arg Arg Gln Leu Ala 
                165                 170                 175     


Glu Arg Ser Ser Thr Gly Gln Gly Gly Ile Ser Pro Gly Ala Pro Arg 
            180                 185                 190         


Ser Arg Pro Pro Val Ser Ser Phe Ser Gly Leu Pro Ser Leu Pro Ser 
        195                 200                 205             


Ile Pro Gly Ile His Pro Arg Ala Pro Ser Pro Pro Arg Ala Thr Ser 
    210                 215                 220                 


Thr Pro Gly Asn Ile Pro Trp Ser Leu Gly Asp Asp Ser Pro Pro Ser 
225                 230                 235                 240 


Ser Ser Phe Pro Gly Pro Ser Gln Pro Arg Val Ser Phe His Pro Gly 
                245                 250                 255     


Asn Pro Phe Val Glu Glu Glu Gly His Arg Pro Arg Ser Gln Ser Arg 
            260                 265                 270         


Glu Arg Arg Arg Glu Ile Leu Pro Ala Pro Val Pro Ser Ala Pro Pro 
        275                 280                 285             


Met Ile Gln Tyr Ile Pro Val Pro Pro Pro Pro Pro Ile Gly Thr Val 
    290                 295                 300                 


Ile Pro Ile Gln His Ile Arg Ser Val Thr Gly Glu Pro Pro Arg Asn 
305                 310                 315                 320 


Pro Arg Glu Ile Pro Ile Trp Leu Gly Arg Asn Ala Pro Ala Ile Asp 
                325                 330                 335     


Gly Val Phe Pro Val Thr Thr Pro Asp Leu Arg Cys Arg Ile Ile Asn 
            340                 345                 350         


Ala Ile Leu Gly Gly Asn Ile Gly Leu Ser Leu Thr Pro Gly Asp Cys 
        355                 360                 365             


Leu Thr Trp Asp Ser Ala Val Ala Thr Leu Phe Ile Arg Thr His Gly 
    370                 375                 380                 


Thr Phe Pro Met His Gln Leu Gly Asn Val Ile Lys Gly Ile Val Asp 
385                 390                 395                 400 


Gln Glu Gly Val Ala Thr Ala Tyr Thr Leu Gly Met Met Leu Ser Gly 
                405                 410                 415     


Gln Asn Tyr Gln Leu Val Ser Gly Ile Ile Arg Gly Tyr Leu Pro Gly 
            420                 425                 430         


Gln Ala Val Val Thr Ala Leu Gln Gln Arg Leu Asp Gln Glu Ile Asp 
        435                 440                 445             


Asp Gln Thr Arg Ala Glu Thr Phe Ile Gln His Leu Asn Ala Val Tyr 
    450                 455                 460                 


Glu Ile Leu Gly Leu Asn Ala Arg Gly Gln Ser Ile Arg Ala Ser Val 
465                 470                 475                 480 


Thr Pro Gln Pro Arg Pro Ser Arg Gly Arg Gly Arg Gly Gln Asn Thr 
                485                 490                 495     


Ser Arg Pro Ser Gln Gly Pro Ala Asn Ser Gly Arg Gly Arg Gln Arg 
            500                 505                 510         


Pro Ala Ser Gly Gln Ser Asn Arg Gly Ser Ser Thr Gln Asn Gln Asn 
        515                 520                 525             


Gln Asp Asn Leu Asn Gln Gly Gly Tyr Asn Leu Arg Pro Arg Thr Tyr 
    530                 535                 540                 


Gln Pro Gln Arg Tyr Gly Gly Gly Arg Gly Arg Arg Trp Asn Asp Asn 
545                 550                 555                 560 


Thr Asn Asn Gln Glu Ser Arg Pro Ser Asp Gln Gly Ser Gln Thr Pro 
                565                 570                 575     


Arg Pro Asn Gln Ala Gly Ser Gly Val Arg Gly Asn Gln Ser Gln Thr 
            580                 585                 590         


Pro Arg Pro Ala Ala Gly Arg Gly Gly Arg Gly Asn His Asn Arg Asn 
        595                 600                 605             


Gln Arg Ser Ser Gly Ala Gly Asp Ser Arg Ala Val Asn Thr Val Thr 
    610                 615                 620                 


Gln Ser Ala Thr Ser Ser Thr Asp Glu Ser Ser Ser Ala Val Thr Ala 
625                 630                 635                 640 


Ala Ser Gly Gly Asp Gln Arg Asp 
                645             


<210>  5

<211>  617
<212>  PRT
<213>  Macaque simian foamy virus

<220>
<223>  Gag (Accession number: YP_001961121.1)

<400>  5
Met Ala Ala Ile Glu Gly Asp Leu Asp Val Gln Ala Leu Ala Asn Leu 
1               5                   10                  15      


Phe Asn Asp Leu Gly Ile Asn Arg Asn Pro Arg His Arg Glu Val Ile 
            20                  25                  30          


Ala Leu Arg Met Thr Gly Gly Trp Trp Gly Pro Ala Thr Arg Tyr Asn 
        35                  40                  45              


Leu Val Ser Leu Leu Leu Gln Asp Asp Gln Gly Gln Pro Leu Pro Gln 
    50                  55                  60                  


Pro Arg Trp Arg Ala Glu Gly Arg Ala Ala Asn Pro Ala Val Met Phe 
65                  70                  75                  80  


Thr Leu Glu Ala Pro Trp Gln Asp Leu Arg Leu Ala Phe Asp Asn Ile 
                85                  90                  95      


Asp Val Gly Glu Gly Thr Leu Arg Phe Gly Pro Leu Ala Asn Gly Asn 
            100                 105                 110         


Tyr Ile Pro Gly Asp Glu Phe Ser Leu Glu Phe Leu Pro Pro Ala Met 
        115                 120                 125             


Gln Glu Ile Thr Gln Met Gln Arg Asp Glu Leu Glu Glu Val Leu Asp 
    130                 135                 140                 


Val Val Gly Gln Ile Thr Met Gln Met Asn Asp Leu Ile Gly Met Gln 
145                 150                 155                 160 


Asp Ala Gln Ile Arg Gly Leu Glu Gly Gln Leu Arg Gly Leu Arg Gly 
                165                 170                 175     


Asn Leu Pro Val Ala Gly Thr Pro Pro Pro Pro Pro Pro Ser Leu Asp 
            180                 185                 190         


Leu Gln Pro Ala Ala Ala Ser Ser Pro Tyr Val Ala Pro Ala Pro Ser 
        195                 200                 205             


Ala Pro Asn Pro Phe Leu Pro Gly Pro Ser Asp Gly Ser Gly Ala Ala 
    210                 215                 220                 


Pro Ala Gln Pro Ser Ala Pro Pro Val Ala Ser Pro Leu Pro Ser Leu 
225                 230                 235                 240 


Leu Pro Ala Gln Pro Met Gln Pro Val Ile Gln Tyr Val His Pro Pro 
                245                 250                 255     


Pro Ile Asn Pro Ala Gln Gln Val Ile Pro Ile Gln His Ile Arg Ala 
            260                 265                 270         


Val Thr Gly Asn Ala Pro Ser Asn Pro Arg Glu Ile Pro Met Trp Ile 
        275                 280                 285             


Gly Arg Asn Ala Ser Ala Ile Glu Gly Val Phe Pro Ile Pro Thr Ser 
    290                 295                 300                 


Asp Ile Arg Ser Arg Val Ile Asn Ala Leu Leu Gly Arg Gln Leu Gly 
305                 310                 315                 320 


Leu Asn Leu Asp Pro Gln His Cys Ile Thr Trp Ala Ser Ala Ile Ala 
                325                 330                 335     


Thr Leu Tyr Val Arg Thr His Gly Ser Tyr Pro Leu His Gln Leu Ala 
            340                 345                 350         


Glu Val Leu Arg Arg Val Ser Asn Ser Glu Gly Ala Ala Ala Ala Trp 
        355                 360                 365             


Gln Leu Gly Met Met Leu Thr Asn Gln Asp Tyr Asn Leu Val Trp Gly 
    370                 375                 380                 


Met Val Arg Pro Leu Leu Pro Gly Gln Ala Val Val Thr Ala Met Gln 
385                 390                 395                 400 


His Arg Leu Asp Gln Glu Val Ser Asp Ala Ala Arg Ile Val Ser Phe 
                405                 410                 415     


Val Asn His Leu Asn Ala Val Tyr Glu Leu Leu Gly Leu Asn Ala Arg 
            420                 425                 430         


Gly Gln Asn Leu Arg Val Ser Thr Gly Gly Gln Thr Thr Ala Arg Thr 
        435                 440                 445             


Ser Ala Gly Arg Gly Ala Arg Gly Arg Arg Ser Gln Gln Gly Thr Pro 
    450                 455                 460                 


Gly Arg Gln Ser Ser Gly Gln Ala Pro Pro Gln Gly Arg Arg Ser Ser 
465                 470                 475                 480 


Gln Gly Gln Gln Pro Arg Gln Ser Glu Ser Gly Asp Gln Asn Asn Gln 
                485                 490                 495     


Arg Gln Leu Gln Gly Gly Asn Asn Arg Gly Gly Tyr Asn Leu Arg Pro 
            500                 505                 510         


Arg Thr Tyr Gln Pro Gln Arg Tyr Gly Gly Gly Arg Gly Arg Arg Trp 
        515                 520                 525             


Asn Asp Gln Thr Ala Arg Ala Asp Asn Gln Gln Arg Ser Gln Ser Gln 
    530                 535                 540                 


Gln Pro Gln Ser Glu Ala Arg Gly Glu Gln Ser Arg Thr Ser Gly Ala 
545                 550                 555                 560 


Gly Arg Glu Gln Gly Gly Arg Gly Asn Gln Asn Arg Asn Gln Arg Ser 
                565                 570                 575     


Ala Gly Glu Asn Thr Asp Arg Ser Val Asn Thr Val Thr Ala Thr Ser 
            580                 585                 590         


Ala Ser Ile Ser Ala Ser Gly Gln Asn Gly Ser Ser Thr Thr Pro Pro 
        595                 600                 605             


Ala Ser Gly Ser Gly Asn Gln Gly Asn 
    610                 615         


<210>  6

<211>  643
<212>  PRT
<213>  African green monkey simian foamy virus

<220>
<223>  Gag (NCBI reference: YP_001956721.2)

<400>  6
Met Gly Asp His Asn Leu Asn Val Gln Glu Leu Leu Asn Leu Phe Gln 
1               5                   10                  15      


Asn Leu Gly Ile Pro Arg Gln Pro Asn His Arg Glu Val Ile Gly Leu 
            20                  25                  30          


Arg Met Leu Gly Gly Trp Trp Gly Pro Gly Thr Arg Tyr Ile Leu Val 
        35                  40                  45              


Ser Ile Phe Leu Gln Asp Asp Ser Gly Gln Pro Leu Gln Gln Pro Arg 
    50                  55                  60                  


Trp Arg Pro Glu Gly Arg Pro Val Asn Pro Leu Val His Asn Thr Ile 
65                  70                  75                  80  


Glu Ala Pro Trp Gly Glu Leu Arg Gln Ala Phe Glu Asp Leu Asp Val 
                85                  90                  95      


Ala Glu Gly Thr Leu Arg Phe Gly Pro Leu Ala Asn Gly Asn Trp Ile 
            100                 105                 110         


Pro Gly Asp Glu Tyr Ser Met Glu Phe Gln Pro Pro Leu Ala Gln Glu 
        115                 120                 125             


Ile Ala Gln Met Gln Arg Asp Glu Leu Glu Glu Ile Leu Asp Ile Thr 
    130                 135                 140                 


Gly Gln Ile Cys Ala Gln Val Ile Asp Leu Val Asp Met Gln Asp Ala 
145                 150                 155                 160 


Gln Ile Arg Gly Leu Glu Arg Arg Ile Gln Asp Arg Leu Gly Leu Arg 
                165                 170                 175     


Asp Asn Leu Pro Val Ala Gly Ile Gln Ala Pro Pro Ser Ser Pro Ile 
            180                 185                 190         


Gly Gln Pro Ile Ala Ser Ser Ser Leu Gln Pro Ile Pro Gly Ser Ser 
        195                 200                 205             


Ser Ser Pro Ala Asp Leu Asp Gly Ile Trp Thr Pro Arg Gln Ile Asp 
    210                 215                 220                 


Pro Arg Leu Ser Arg Val Ala Tyr Asn Pro Phe Leu Pro Gly Ser Ser 
225                 230                 235                 240 


Asp Gly Ser Gly Gly Ser Ile Pro Val Gln Pro Ser Ala Pro Pro Ala 
                245                 250                 255     


Val Leu Pro Ser Leu Pro Ser Leu Pro Ala Pro Val Ser Gln Pro Ile 
            260                 265                 270         


Ile Gln Tyr Val Ala Gln Pro Pro Val Pro Ala Pro Gln Ala Ile Pro 
        275                 280                 285             


Ile Gln His Ile Arg Ala Val Thr Gly Asn Thr Pro Thr Asn Pro Arg 
    290                 295                 300                 


Asp Ile Pro Met Trp Leu Gly Arg His Ser Ala Ala Ile Glu Gly Val 
305                 310                 315                 320 


Phe Pro Met Thr Thr Pro Asp Leu Arg Cys Arg Val Val Asn Ala Leu 
                325                 330                 335     


Ile Gly Gly Ser Leu Gly Leu Ser Leu Glu Pro Ile His Cys Val Asn 
            340                 345                 350         


Trp Ala Ala Val Val Ala Ala Leu Tyr Val Arg Thr His Gly Ser Tyr 
        355                 360                 365             


Pro Ile His Glu Leu Ala Asn Val Leu Arg Ala Val Val Thr Gln Glu 
    370                 375                 380                 


Gly Val Ala Thr Gly Phe Gln Leu Gly Ile Met Leu Ser Asn Gln Asp 
385                 390                 395                 400 


Tyr Asn Leu Val Trp Gly Ile Leu Arg Pro Leu Leu Pro Gly Gln Ala 
                405                 410                 415     


Val Val Thr Ala Met Gln Gln Arg Leu Asp Gln Glu Val Asn Asp Ala 
            420                 425                 430         


Ala Arg Ile Thr Ser Phe Asn Gly His Leu Asn Asp Ile Tyr Gln Leu 
        435                 440                 445             


Leu Gly Leu Asn Ala Arg Gly Gln Ser Ile Ala Arg Ala Gln Ser Ala 
    450                 455                 460                 


Ser Thr Ser Gly Asn Ser Ala Ser Ala Gly Arg Gly Arg Arg Gly Gln 
465                 470                 475                 480 


Arg Thr Gln Gln Gln Ala Gly Arg Gln Gln Gln Gln Gln Thr Arg Arg 
                485                 490                 495     


Thr Asn Gln Gly Asn Gln Gly Gln Arg Asp Asn Asn Gln Arg Gln Ser 
            500                 505                 510         


Ser Gly Gly Asn Gln Gly Gln Arg Gly Gln Gly Gly Tyr Asp Leu Arg 
        515                 520                 525             


Pro Arg Thr Tyr Gln Pro Gln Arg Tyr Gly Gly Gly Arg Gly Arg Arg 
    530                 535                 540                 


Trp Asn Asp Asn Gln Gln Gln Gln Gln Ala Gln Pro Gly Arg Ser Ser 
545                 550                 555                 560 


Asp Gln Pro Arg Ser Gln Ser Gln Gln Pro Gln Pro Glu Ala Arg Gly 
                565                 570                 575     


Asp Gln Ser Arg Thr Ser Gly Ala Gly Arg Gly Gln Gln Gly Arg Gly 
            580                 585                 590         


Asn Gln Asn Arg Asn Gln Arg Arg Ala Asp Ala Asn Asn Thr Arg Asn 
        595                 600                 605             


Val Asp Thr Val Thr Ala Thr Thr Thr Ser Ser Ser Thr Ala Ser Ser 
    610                 615                 620                 


Gly Gln Asn Gly Ser Ser Thr Thr Pro Pro Ala Ser Gly Ser Arg Asn 
625                 630                 635                 640 


Gln Gly Asp 
            


<210>  7

<211>  572
<212>  PRT
<213>  Squirrel monkey foamy virus

<220>
<223>  Gag (GenBank: ADE05994.1)

<400>  7
Met Ala Arg Gly Asn Leu Asp Ile Ala Arg Leu Thr Val Leu Leu Gln 
1               5                   10                  15      


Glu Asn Ser Leu Ser Gly Asn Pro Pro His Leu Thr His Tyr Val Leu 
            20                  25                  30          


Arg Met Thr Glu Gly Trp Trp Gly Pro Phe Pro Arg Tyr Thr Arg Val 
        35                  40                  45              


Arg Ile Ile Leu Gln Asp Glu Ser Gly Asn Pro Leu Ser Gln Pro Arg 
    50                  55                  60                  


Trp Glu Leu Val Asp Arg Met Phe Asn Pro Leu Arg Asp Pro Ile Leu 
65                  70                  75                  80  


Glu Thr Thr Leu Asp Glu Met Asp Arg Val Phe Asp Gly Ile Asn Leu 
                85                  90                  95      


Ser Pro Gly Thr Glu Arg Tyr Gly Pro Leu Cys Asp Gly Asn Phe Leu 
            100                 105                 110         


Tyr Thr Asp Asp Ala Trp Asn Asp Phe Asn Pro Met Ser Ala Leu Glu 
        115                 120                 125             


Val Ala Asp Val Glu Leu Thr Pro Ala Leu Tyr Arg Glu His Leu Asn 
    130                 135                 140                 


Phe Leu Ser Arg Val Ala Glu Gly Met Leu Gly Asp Ile Ile Met Leu 
145                 150                 155                 160 


Lys Gln Glu Asn Glu Asp Ala His Glu Thr Ile Thr Arg Leu Arg Glu 
                165                 170                 175     


Arg Ile Ile Asn Gln Pro Thr Ser Ala Pro Ile Ile Thr Ser Thr Pro 
            180                 185                 190         


Gly Gly Val Ser Gly Leu Pro Pro Ser Val Tyr Gln Pro Thr Gly Leu 
        195                 200                 205             


His Glu Thr Tyr Ile Gln Pro Ser Arg Pro Met Gln Pro Ser Ala Pro 
    210                 215                 220                 


Pro Leu Pro Leu Met Gly Asp Leu Gly Ser Gly Ile Leu Ser Val Leu 
225                 230                 235                 240 


Pro Ile Ser Gln Ile Arg Thr Val Ile Gly Asn Thr Pro Val Asp Pro 
                245                 250                 255     


Lys Lys Val Pro Leu Trp Ile Ala Lys Ser Ala Ser Ala Ile Glu Gly 
            260                 265                 270         


Val Met Pro Thr Asn Thr Pro Asp Ile Arg Cys Arg Leu Val Asn Ala 
        275                 280                 285             


Leu Leu Pro Gln His Gly Gly Leu Ile Leu Gln Pro His Glu Cys Asn 
    290                 295                 300                 


Ser Trp Thr Gln Ile Ala Ser Ala Leu Tyr Thr Arg Val Asn Gly Met 
305                 310                 315                 320 


Ile Pro Leu His Ala Leu Pro Gln Thr Leu Ser Gln Val Thr Lys Glu 
                325                 330                 335     


Glu Gly Ile Leu Val Ala Tyr Gln Ile Gly Met Thr Phe Thr Gly Gln 
            340                 345                 350         


Asn Phe Pro Leu Thr Trp Gly Ile Leu Arg Pro Leu Leu Pro Gly Gln 
        355                 360                 365             


Ala Val Val Ala Met Met Gln Gly Tyr Leu Asp Gln Tyr Pro Thr Asp 
    370                 375                 380                 


Asp Leu Lys Ala Val Asn Phe Ala Ser Ile Leu Arg Arg Val Phe Asp 
385                 390                 395                 400 


Ile Leu Gly Leu Asn Tyr Met Gly Gln Asn Ile Arg Asn Gln Ser Ser 
                405                 410                 415     


Pro Ser Leu Thr Val Ser Ser Ala Arg Gly Ala Thr Gly Arg Gly Arg 
            420                 425                 430         


Gly Arg Ser Arg Asn Ile Gly Arg Gly Arg Gly Thr Thr Pro Asn Phe 
        435                 440                 445             


Gln Gly Arg Gly Gln Pro Ala Thr Thr Pro Thr Val Thr Thr Ser Gly 
    450                 455                 460                 


Ser Thr Ser Ser Thr Thr Glu Ser Gln Gly Arg Asn Ser Asn Pro Asn 
465                 470                 475                 480 


Tyr Asn Phe Arg Pro Arg Val Asn Gln Pro Pro Arg Tyr Gly Gly Gly 
                485                 490                 495     


Pro Asn Pro Tyr Arg Asn Arg Glu Pro Leu Asn Asn Pro Pro Asn Arg 
            500                 505                 510         


Glu Asn Thr Thr Gln Asn Asn Thr Arg Arg Pro Gly Ser Gln Gly Gln 
        515                 520                 525             


Asn Arg Asn Arg Asn Gln Asn Arg Thr Val Asn Ala Val Gln Val Val 
    530                 535                 540                 


Pro Asn Gln Asp Asn Thr Asn Gln Pro Asn Ile Asn Pro Asn Gln Asn 
545                 550                 555                 560 


Val Ser Thr Pro Ala Ser Ala Ser Gly Gly Asn Ser 
                565                 570         


<210>  8

<211>  559
<212>  PRT
<213>  Equine Foamy virus

<220>
<223>  Gag (NCBI Reference: NP_054715.1)

<400>  8
Met Ala Gln Asn Glu Thr Phe Asp Pro Val Ala Leu Gln Gly Tyr Tyr 
1               5                   10                  15      


Pro Ala Gly Gly Ile Leu Ala Asp Asn Asp Ile Ile Asn Ile Arg Phe 
            20                  25                  30          


Thr Ser Gly Gln Trp Gly Ile Gly Asp Arg Trp Leu Gln Val Arg Leu 
        35                  40                  45              


Arg Leu Val Asp Pro Asn Thr Gly Gln Pro Leu Ala Gln Pro Glu Tyr 
    50                  55                  60                  


Glu Asp Thr Gly Leu Pro Ala Glu Asn Arg Gly Ile Val Val Ala Val 
65                  70                  75                  80  


Ser His Asn Ala Ala Arg Asn Ile Phe Asn Asn Val Gln Pro Ala Gly 
                85                  90                  95      


Gly Pro Asn Arg His Gly Pro Leu His Asp Gly Gln Phe Gln Val Gly 
            100                 105                 110         


Asp Asp Pro Ser Glu His Phe Val Pro Ile Glu Glu Asn Leu Ile Pro 
        115                 120                 125             


Gln Glu Ile Val Asn Leu Gly Ala Ala Arg Arg Glu Val Arg Leu Leu 
    130                 135                 140                 


Arg Glu Met Cys Val Arg Leu Leu His Val Arg Arg Gln Met Met Gly 
145                 150                 155                 160 


Met Gly Met Pro Gly Ala Ile Gln Pro Gln Pro Pro Val Gly Pro Leu 
                165                 170                 175     


Pro Ala Pro Ala Gln Pro Pro Ile Pro Gly Pro Pro Val Pro Pro Pro 
            180                 185                 190         


Val Pro Pro Pro Ala Pro Pro Ala Pro Val Asn Pro Pro Val Pro Pro 
        195                 200                 205             


Val Gln Pro Ile His His Leu Pro Ile Thr His Ile Arg Ala Val Ile 
    210                 215                 220                 


Gly Glu Thr Pro Ala Gln Ile Arg Asp Val Pro Leu Trp Leu Ala Gln 
225                 230                 235                 240 


Ser Ile Pro Ala Leu Thr Gly Val Tyr Pro Ala Met Asp Ala Gly Thr 
                245                 250                 255     


Leu Thr Arg Leu Val Asn Ala Ile Thr Ala Arg His Pro Gly Leu Ala 
            260                 265                 270         


Leu Gly Met Asn Glu Ala Gly Ser Trp His Glu Ala Val His Leu Ile 
        275                 280                 285             


Trp Gln Arg Thr Phe Gly Ala Thr Ala Leu His Ala Leu Ser Asp Val 
    290                 295                 300                 


Leu Lys Gly Ile Ala Gln Arg Asn Gly Val Val Met Ala Leu Glu Met 
305                 310                 315                 320 


Gly Leu Met Phe Thr Asn Asp Asp Trp Asp Leu Thr Trp Ser Val Ile 
                325                 330                 335     


Arg Arg Cys Leu Pro Gly Gln Ala Ser Val Val Thr Ile Gln Ala Arg 
            340                 345                 350         


Leu Asp Ala Leu Pro Asn Asn Gln Ala Arg Ile Ile Gln Ala Gly Phe 
        355                 360                 365             


Ile Ile Arg Glu Val Tyr Glu Val Leu Gly Leu Asp Pro Leu Gly Arg 
    370                 375                 380                 


Pro Leu Asn Phe Pro Gly Gly Leu Thr Gln Arg Asp Thr Ala Val Pro 
385                 390                 395                 400 


Val Thr Arg Gly Arg Gly Arg Gly Arg Thr Gly Pro Arg Arg Gly Pro 
                405                 410                 415     


Val Leu Pro Val Ser Ser Asn Gln Arg Arg Gln Glu Thr Ala Gly Gly 
            420                 425                 430         


Asn Gln Pro Gln Thr Gln Pro Gln Gln Gln Asn Thr Phe Ser Asn Gln 
        435                 440                 445             


Thr Asn Gln Arg Gly Asn Gln Arg Gln Trp Gln Asn Arg Gly Thr Asp 
    450                 455                 460                 


Ser Gln Arg Arg Tyr Phe Phe Arg Pro Arg Pro Ser Gln Pro Gln Arg 
465                 470                 475                 480 


Tyr Gly Ser Asn Gln Gly Pro Asp Asn Pro Asn Pro Tyr Arg Gly Arg 
                485                 490                 495     


Asp Ser Thr Asn Gln Ser Gly Gln Glu Arg Gln Leu Pro Gln Gln Gln 
            500                 505                 510         


Gln Gly Ser Arg Arg Gly Pro Gly Arg Asn Thr Asn Ser Gly Asn Asn 
        515                 520                 525             


Thr Val His Thr Val Arg Gln Val Glu Ser Ser Gln Leu Gln Gln Asn 
    530                 535                 540                 


Ala Ser Pro Thr Ala Ser Pro Ser Thr Asn Gln Gly Gln Gln Pro 
545                 550                 555                 


<210>  9

<211>  544
<212>  PRT
<213>  Bovine Foamy Virus

<220>
<223>  Gag (GenBank: AFR79238.1)

<400>  9
Met Ala Leu Asn Asp Phe Asp Pro Ile Ala Leu Gln Gly Tyr Leu Pro 
1               5                   10                  15      


Ala Pro Arg Val Leu Gln His Asn Asp Ile Ile Ile Cys Arg Ala Thr 
            20                  25                  30          


Ser Gly Pro Trp Gly Ile Gly Asp Arg Tyr Asn Leu Ile Arg Ile His 
        35                  40                  45              


Leu Gln Asp Pro Ala Gly Gln Pro Leu Pro Ile Pro Gln Trp Glu Pro 
    50                  55                  60                  


Ile Pro Asn Arg Thr Ala Asn Pro Arg Thr Gln Pro Tyr Pro Val Val 
65                  70                  75                  80  


Ser Ala Pro Met Ala Thr Leu Glu Asn Ile Leu Asn Asn Phe His Ile 
                85                  90                  95      


Pro His Gly Val Ser Arg Tyr Gly Pro Leu Glu Gly Gly Asp Tyr Gln 
            100                 105                 110         


Pro Gly Glu Gln Tyr Ser Gln Gly Phe Cys Pro Val Thr Gln Ala Glu 
        115                 120                 125             


Ile Ala Leu Leu Asn Gly Gln His Leu Glu Glu Glu Ile Thr Ile Leu 
    130                 135                 140                 


Arg Glu Ile Thr His Arg Leu Met Gln Gly Val Arg Pro Pro Ala Ala 
145                 150                 155                 160 


Pro Gln Gly Pro Ala Pro Pro Pro Pro Pro Ala Gln Pro Pro Ala Pro 
                165                 170                 175     


Leu Pro Ala Pro Pro Ile Gly Pro Pro Pro Pro Ala Val Pro Ala Pro 
            180                 185                 190         


Ala Pro Gly Pro Met Pro Val Pro Gln His Leu Pro Ile Thr His Ile 
        195                 200                 205             


Arg Ala Val Ile Gly Glu Thr Pro Ala Asn Ile Arg Glu Val Pro Leu 
    210                 215                 220                 


Trp Leu Ala Arg Ala Val Pro Ala Leu Gln Gly Val Tyr Pro Val Gln 
225                 230                 235                 240 


Asp Ala Val Met Arg Ser Arg Thr Val Asn Ala Leu Thr Val Arg His 
                245                 250                 255     


Pro Gly Leu Ala Leu Glu Pro Leu Glu Cys Gly Ser Trp Gln Glu Cys 
            260                 265                 270         


Leu Ala Ala Leu Trp Gln Arg Thr Phe Gly Ala Thr Ala Leu His Ala 
        275                 280                 285             


Leu Gly Asp Thr Leu Gly Gln Ile Ala Asn Ser Asp Gly Ile Val Met 
    290                 295                 300                 


Ala Ile Glu Leu Gly Leu Leu Phe Ser Asp Asp Asn Trp Asp Leu Val 
305                 310                 315                 320 


Trp Gly Ile Cys Arg Arg Phe Leu Pro Gly Gln Ala Val Cys Val Ala 
                325                 330                 335     


Val Gln Ala Arg Leu Asp Pro Leu Pro Asp Asn Ala Thr Arg Ile Val 
            340                 345                 350         


Met Ile Ser His Ile Ile Arg Asp Val Tyr Ala Ile Leu Gly Leu Asp 
        355                 360                 365             


Pro Leu Gly Arg Pro Met Gln Gln Pro Leu Pro Arg Arg Asn Asn Gln 
    370                 375                 380                 


Pro Pro Arg Gln Gln Pro Gln Arg Arg Gln Gln Pro Arg Arg Thr Gly 
385                 390                 395                 400 


Asn Gln Glu Glu Arg Gly Gln Arg Asn Arg Gly Arg Gln Asn Ala Gln 
                405                 410                 415     


Thr Pro Arg Gln Glu Gly Asn Arg Leu Gln Asn Ser Gln Leu Pro Gly 
            420                 425                 430         


Pro Arg Asp Tyr Pro Asn Asn Ser Asn Gln Pro Arg Tyr Pro Leu Arg 
        435                 440                 445             


Pro Asn Pro Gln Gln Pro Gln Arg Tyr Gly Gln Glu Gln Asn Arg Gly 
    450                 455                 460                 


Asn Asn Pro Asn Pro Tyr Arg Gln Pro Thr Pro Gly Asn Gly Asn Gln 
465                 470                 475                 480 


Asn Arg Asn Phe Ser Arg Gly Pro Ala Pro Val Asn Glu Gln Ser Arg 
                485                 490                 495     


Gly Arg Gly Arg Ser Ser Gln Gly Thr Asn Asn Thr Gly Ser Ser Ala 
            500                 505                 510         


Val His Ser Val Arg Leu Thr Ser Ala Ala Pro Pro Ile Pro Pro Gln 
        515                 520                 525             


Asp Ala Gly Thr Pro Pro Thr Pro Ser Gly Asn Gln Gly Gln Ser Ser 
    530                 535                 540                 



<210>  10

<211>  514
<212>  PRT
<213>  Feline Foamy virus 

<220>
<223>  Gag (GenBank: AGC11907.1)


<400>  10
Met Ala Arg Glu Leu Asn Pro Leu Gln Leu Gln Gln Leu Tyr Ile Asn 
1               5                   10                  15      


Asn Gly Leu Gln Pro Asn Pro Gly His Gly Asp Val Ile Ala Val Arg 
            20                  25                  30          


Phe Thr Gly Gly Pro Trp Gly Pro Gly Asp Arg Trp Ala Arg Val Ala 
        35                  40                  45              


Ile Arg Leu Gln Asp Asn Thr Gly Gln Pro Leu Gln Val Pro Gly Tyr 
    50                  55                  60                  


Asp Leu Glu Pro Gly Ile Ile Asn Leu Arg Glu Asp Ile Leu Ile Ala 
65                  70                  75                  80  


Gly Pro Tyr Asn Leu Ile Arg Thr Ala Phe Leu Asp Leu Glu Pro Ala 
                85                  90                  95      


Arg Gly Pro Glu Arg His Gly Pro Phe Gly Asp Gly Arg Leu Gln Pro 
            100                 105                 110         


Gly Asp Gly Leu Ser Glu Gly Phe Gln Pro Ile Thr Asp Glu Glu Met 
        115                 120                 125             


Gln Thr Glu Val Gly Thr Ile Gly Ala Ala Arg Asn Glu Ile Arg Leu 
    130                 135                 140                 


Leu Arg Glu Ala Leu Gln Arg Leu Gln Val Gly Gly Val Gly Arg Pro 
145                 150                 155                 160 


Ile Pro Gly Ala Ile Leu Gln Pro Gln Pro Val Ile Gly Ala Val Ile 
                165                 170                 175     


Pro Ile Asn His Leu Arg Ser Val Ile Gly Asn Thr Pro Pro Asn Pro 
            180                 185                 190         


Arg Asp Val Ala Leu Trp Leu Gly Arg Ser Thr Ala Ala Ile Glu Gly 
        195                 200                 205             


Val Phe Pro Ile Val Asp Gln Val Thr Arg Met Arg Val Val Asn Ala 
    210                 215                 220                 


Leu Val Ala Ser His Pro Gly Leu Thr Leu Thr Glu Asn Glu Ala Gly 
225                 230                 235                 240 


Ser Trp Asn Ala Ala Ile Ser Ala Leu Trp Arg Lys Ala His Gly Ala 
                245                 250                 255     


Ala Ala Gln His Glu Leu Ala Gly Val Leu Ser Asp Ile Asn Lys Lys 
            260                 265                 270         


Glu Gly Ile Gln Thr Ala Phe Asn Leu Gly Met Gln Phe Thr Asp Gly 
        275                 280                 285             


Asn Trp Ser Leu Val Trp Gly Ile Ile Arg Thr Leu Leu Pro Gly Gln 
    290                 295                 300                 


Ala Leu Val Thr Asn Ala Gln Ser Gln Phe Asp Leu Met Gly Asp Asp 
305                 310                 315                 320 


Ile Gln Arg Ala Glu Asn Phe Pro Arg Val Ile Asn Asn Leu Tyr Thr 
                325                 330                 335     


Met Leu Gly Leu Asn Ile His Gly Gln Ser Ile Arg Pro Arg Val Gln 
            340                 345                 350         


Thr Gln Pro Gln Gln Ala Arg Ser Arg Asn Gln Gly Arg Ser Gln Gln 
        355                 360                 365             


Gly Gln Leu Asn Gln Pro Arg Pro Gln Asn Arg Asn Asn Gln Ser Tyr 
    370                 375                 380                 


Arg Pro Pro Arg Gln Gln Gln Gln His Ser Asp Val Pro Glu Gln Arg 
385                 390                 395                 400 


Asp Gln Arg Gly Pro Ser Gln Pro Pro Arg Gly Ser Gly Gly Gly Tyr 
                405                 410                 415     


Asn Phe Arg Arg Asn Pro Gln Gln Pro Gln Arg Tyr Gly Gln Gly Pro 
            420                 425                 430         


Pro Gly Pro Asn Pro Tyr Arg Arg Phe Gly Asp Gly Gly Asn Pro Gln 
        435                 440                 445             


Gln Gln Gly Pro Pro Pro Asn Arg Gly Pro Asp Gln Gly Pro Arg Pro 
    450                 455                 460                 


Gly Gly Asn Pro Arg Gly Gly Gly Arg Gly Gln Gly Pro Arg Asn Gly 
465                 470                 475                 480 


Gly Gly Asn Ala Ala Ala Val His Thr Val Lys Ala Ser Glu Asn Glu 
                485                 490                 495     


Thr Lys Asn Gly Ser Ala Glu Ala Ala Asp Gly Gly Lys Lys Gly Gly 
            500                 505                 510         


Lys Asp 
        



<210>  11

<211>  3450
<212>  DNA
<213>  artificial sequence

<220>
<223> Description of artificial sequence: Synthetic polynucleotide

<220>
<223>  FV_Pol_HCO_Seq

<400>  11
ccatgggcca ccatgaaccc cctgcagctg ctgcagcccc tgcccgccga gatcaagggc     60
accaagctgc tggcccactg ggacagcggc gccaccatca cctgcatccc cgagagcttt    120
ctggaagatg agcagcccat caagaaaacc ctgatcaaga ccatccacgg cgagaagcag    180
cagaacgtgt actacgtgac cttcaaggtg aaaggccgga aggtggaggc cgaggtgatc    240
gccagcccct acgagtacat cctgctgtcc cccaccgacg tgccctggct gacccagcag    300
cctctgcagc tgaccatcct ggtgcccctg caggaatacc aggaaaagat cctgagcaag    360
accgccctgc ccgaggacca gaaacagcag ctgaaaaccc tgttcgtgaa gtacgacaac    420
ctgtggcagc actgggagaa ccaggtgggc caccggaaga tccggcccca caacatcgcc    480
accggcgact acccccccag gccccagaag cagtacccca tcaaccccaa ggccaagccc    540
agcatccaga tcgtgatcga cgacctgctg aagcagggcg tgctgacccc ccagaacagc    600
accatgaata cccccgtgta ccccgtgccc aagcccgacg gccggtggcg gatggtgctg    660
gactaccggg aggtgaacaa gacaatcccc ctgacagccg cccagaacca gcacagcgcc    720
ggcatcctgg ccaccatcgt gcggcagaag tacaagacca ccctggacct ggccaacggc    780
ttctgggccc accctatcac ccccgagtcc tactggctga ccgccttcac atggcagggc    840
aagcagtact gctggacccg gctgccccag ggcttcctga acagccctgc cctgttcacc    900
gccgacgtgg tggatctgct gaaagaaatc cccaacgtgc aggtgtacgt ggacgacatc    960
tacctgagcc acgacgaccc caaagaacac gtgcagcagc tggaaaaggt gttccagatc   1020
ctgctgcagg ccggctacgt ggtgtccctg aagaagagcg agatcggcca gaaaaccgtg   1080
gagttcctgg gcttcaacat caccaaagag ggcaggggcc tgaccgacac cttcaagaca   1140
aagctgctga acatcacccc ccccaaggac ctgaagcagc tgcagagcat cctgggcctg   1200
ctgaacttcg cccggaactt catccccaac ttcgccgagc tggtgcagcc tctgtacaac   1260
ctgatcgcct ccgccaaggg caagtacatc gagtggagcg aggaaaacac caagcagctg   1320
aacatggtga tcgaggccct gaacaccgcc agcaacctgg aagagcggct gcccgagcag   1380
cggctggtga tcaaggtgaa caccagcccc agcgccggct atgtgcggta ctacaacgag   1440
accggcaaga aacccatcat gtacctgaac tacgtgttca gcaaggccga gctgaagttc   1500
tccatgctgg aaaaactgct gaccaccatg cacaaggccc tgatcaaagc tatggatctg   1560
gctatgggcc aggaaatcct ggtctacagc cccatcgtga gcatgaccaa gatccagaaa   1620
acccccctgc ctgagcggaa ggccctgccc atccggtgga tcacctggat gacctacctg   1680
gaagatcccc ggatccagtt ccactacgac aagaccctgc cagagctgaa gcacatcccc   1740
gacgtgtaca ccagcagcca gagccccgtg aagcacccca gccagtacga gggcgtgttc   1800
tacaccgacg gcagcgccat caagtccccc gaccccacca agagcaacaa cgccggcatg   1860
ggcatcgtgc acgccaccta caagcccgag taccaggtgc tgaaccagtg gagcatcccc   1920
ctgggcaacc acaccgccca gatggccgag atcgccgccg tggagtttgc ctgcaagaag   1980
gccctgaaga tccctggccc cgtgctggtg attaccgaca gcttctacgt ggccgagagc   2040
gccaacaaag agctgcccta ctggaagagc aacggcttcg tgaacaacaa gaagaagccc   2100
ctgaaacaca tcagcaagtg gaagagcatc gccgagtgcc tgagcatgaa gcccgacatc   2160
accatccagc acgagaaggg gcaccagccc accaacacca gcatccacac cgaaggcaac   2220
gccctggccg acaagctggc cacccagggc tcctacgtgg tgaactgcaa caccaagaag   2280
cccaacctgg acgccgaact ggaccagctg ctgcagggcc actacatcaa gggctacccc   2340
aagcagtaca cctattttct ggaagatggc aaggtgaaag tgtccaggcc cgagggcgtg   2400
aagatcatcc cccctcagag cgaccggcag aaaatcgtgc tgcaggccca caacctggcc   2460
cacaccggca gagaggccac cctgctgaag atcgccaacc tgtactggtg gcccaacatg   2520
cggaaggacg tggtgaaaca gctgggccgg tgccagcagt gcctgatcac caacgccagc   2580
aacaaggcca gcggccccat cctgcggccc gacagacccc agaagccctt cgacaagttc   2640
ttcatcgact acatcggccc cctgcccccc agccagggct acctgtacgt gctggtggtg   2700
gtggacggca tgaccggctt cacctggctg taccctacca aggcccccag cacctccgcc   2760
accgtgaaga gcctgaacgt gctgaccagc atcgccatcc ccaaggtgat ccacagcgac   2820
cagggagccg ccttcaccag cagcaccttc gccgagtggg ccaaagagcg gggcatccac   2880
ctggaatttt ccacccccta ccacccccag agcagcggca aggtggagcg gaagaacagc   2940
gacatcaagc ggctgctgac caaactgctg gtgggcaggc ccaccaagtg gtacgatctg   3000
ctgcccgtgg tgcagctggc cctgaataac acctactccc ccgtgctgaa gtacacccct   3060
caccagctgc tgttcggcat cgacagcaac acccccttcg ccaatcagga caccctggat   3120
ctgacccggg aggaagagct gtctctgctg caggaaatcc ggaccagcct gtaccacccc   3180
agcacccccc ctgccagcag caggtcctgg tcccccgtgg tgggccagct ggtgcaggaa   3240
cgggtcgcca ggcccgccag cctgagaccc cggtggcaca agccctccac agtgctgaag   3300
gtgctgaatc cccggaccgt ggtgatcctg gaccacctgg gcaacaaccg gaccgtgagc   3360
atcgacaacc tgaagcccac ctcccaccag aacggcacca ccaacgacac cgccactatg   3420
gaccacctgg aaaagaacga gtgactcgag                                    3450


<210>  12

<211>  3432
<212>  RNA
<213>  artificial sequence

<220>
<223> Description of artificial sequence: Synthetic polynucleotide

<220>
<223>  FV_Pol_HCO_Seq

<400>  12
augaaccccc ugcagcugcu gcagccccug cccgccgaga ucaagggcac caagcugcug     60
gcccacuggg acagcggcgc caccaucacc ugcauccccg agagcuuucu ggaagaugag    120
cagcccauca agaaaacccu gaucaagacc auccacggcg agaagcagca gaacguguac    180
uacgugaccu ucaaggugaa aggccggaag guggaggccg aggugaucgc cagccccuac    240
gaguacaucc ugcugucccc caccgacgug cccuggcuga cccagcagcc ucugcagcug    300
accauccugg ugccccugca ggaauaccag gaaaagaucc ugagcaagac cgcccugccc    360
gaggaccaga aacagcagcu gaaaacccug uucgugaagu acgacaaccu guggcagcac    420
ugggagaacc aggugggcca ccggaagauc cggccccaca acaucgccac cggcgacuac    480
ccccccaggc cccagaagca guaccccauc aaccccaagg ccaagcccag cauccagauc    540
gugaucgacg accugcugaa gcagggcgug cugacccccc agaacagcac caugaauacc    600
cccguguacc ccgugcccaa gcccgacggc cgguggcgga uggugcugga cuaccgggag    660
gugaacaaga caaucccccu gacagccgcc cagaaccagc acagcgccgg cauccuggcc    720
accaucgugc ggcagaagua caagaccacc cuggaccugg ccaacggcuu cugggcccac    780
ccuaucaccc ccgaguccua cuggcugacc gccuucacau ggcagggcaa gcaguacugc    840
uggacccggc ugccccaggg cuuccugaac agcccugccc uguucaccgc cgacguggug    900
gaucugcuga aagaaauccc caacgugcag guguacgugg acgacaucua ccugagccac    960
gacgacccca aagaacacgu gcagcagcug gaaaaggugu uccagauccu gcugcaggcc   1020
ggcuacgugg ugucccugaa gaagagcgag aucggccaga aaaccgugga guuccugggc   1080
uucaacauca ccaaagaggg caggggccug accgacaccu ucaagacaaa gcugcugaac   1140
aucacccccc ccaaggaccu gaagcagcug cagagcaucc ugggccugcu gaacuucgcc   1200
cggaacuuca uccccaacuu cgccgagcug gugcagccuc uguacaaccu gaucgccucc   1260
gccaagggca aguacaucga guggagcgag gaaaacacca agcagcugaa cauggugauc   1320
gaggcccuga acaccgccag caaccuggaa gagcggcugc ccgagcagcg gcuggugauc   1380
aaggugaaca ccagccccag cgccggcuau gugcgguacu acaacgagac cggcaagaaa   1440
cccaucaugu accugaacua cguguucagc aaggccgagc ugaaguucuc caugcuggaa   1500
aaacugcuga ccaccaugca caaggcccug aucaaagcua uggaucuggc uaugggccag   1560
gaaauccugg ucuacagccc caucgugagc augaccaaga uccagaaaac cccccugccu   1620
gagcggaagg cccugcccau ccgguggauc accuggauga ccuaccugga agauccccgg   1680
auccaguucc acuacgacaa gacccugcca gagcugaagc acauccccga cguguacacc   1740
agcagccaga gccccgugaa gcaccccagc caguacgagg gcguguucua caccgacggc   1800
agcgccauca agucccccga ccccaccaag agcaacaacg ccggcauggg caucgugcac   1860
gccaccuaca agcccgagua ccaggugcug aaccagugga gcaucccccu gggcaaccac   1920
accgcccaga uggccgagau cgccgccgug gaguuugccu gcaagaaggc ccugaagauc   1980
ccuggccccg ugcuggugau uaccgacagc uucuacgugg ccgagagcgc caacaaagag   2040
cugcccuacu ggaagagcaa cggcuucgug aacaacaaga agaagccccu gaaacacauc   2100
agcaagugga agagcaucgc cgagugccug agcaugaagc ccgacaucac cauccagcac   2160
gagaaggggc accagcccac caacaccagc auccacaccg aaggcaacgc ccuggccgac   2220
aagcuggcca cccagggcuc cuacguggug aacugcaaca ccaagaagcc caaccuggac   2280
gccgaacugg accagcugcu gcagggccac uacaucaagg gcuaccccaa gcaguacacc   2340
uauuuucugg aagauggcaa ggugaaagug uccaggcccg agggcgugaa gaucaucccc   2400
ccucagagcg accggcagaa aaucgugcug caggcccaca accuggccca caccggcaga   2460
gaggccaccc ugcugaagau cgccaaccug uacugguggc ccaacaugcg gaaggacgug   2520
gugaaacagc ugggccggug ccagcagugc cugaucacca acgccagcaa caaggccagc   2580
ggccccaucc ugcggcccga cagaccccag aagcccuucg acaaguucuu caucgacuac   2640
aucggccccc ugccccccag ccagggcuac cuguacgugc uggugguggu ggacggcaug   2700
accggcuuca ccuggcugua cccuaccaag gcccccagca ccuccgccac cgugaagagc   2760
cugaacgugc ugaccagcau cgccaucccc aaggugaucc acagcgacca gggagccgcc   2820
uucaccagca gcaccuucgc cgagugggcc aaagagcggg gcauccaccu ggaauuuucc   2880
acccccuacc acccccagag cagcggcaag guggagcgga agaacagcga caucaagcgg   2940
cugcugacca aacugcuggu gggcaggccc accaaguggu acgaucugcu gcccguggug   3000
cagcuggccc ugaauaacac cuacuccccc gugcugaagu acaccccuca ccagcugcug   3060
uucggcaucg acagcaacac ccccuucgcc aaucaggaca cccuggaucu gacccgggag   3120
gaagagcugu cucugcugca ggaaauccgg accagccugu accaccccag cacccccccu   3180
gccagcagca gguccugguc ccccguggug ggccagcugg ugcaggaacg ggucgccagg   3240
cccgccagcc ugagaccccg guggcacaag cccuccacag ugcugaaggu gcugaauccc   3300
cggaccgugg ugauccugga ccaccugggc aacaaccgga ccgugagcau cgacaaccug   3360
aagcccaccu cccaccagaa cggcaccacc aacgacaccg ccacuaugga ccaccuggaa   3420
aagaacgagu ga                                                       3432



<210>  13

<211>  1143
<212>  PRT
<213>  artificial sequence

<220>
<223> Description of artificial sequence: Synthetic polypeptides


<220>
<223>  FV_Pol_HCO_Seq

<400>  13
Met Asn Pro Leu Gln Leu Leu Gln Pro Leu Pro Ala Glu Ile Lys Gly 
1               5                   10                  15      


Thr Lys Leu Leu Ala His Trp Asp Ser Gly Ala Thr Ile Thr Cys Ile 
            20                  25                  30          


Pro Glu Ser Phe Leu Glu Asp Glu Gln Pro Ile Lys Lys Thr Leu Ile 
        35                  40                  45              


Lys Thr Ile His Gly Glu Lys Gln Gln Asn Val Tyr Tyr Val Thr Phe 
    50                  55                  60                  


Lys Val Lys Gly Arg Lys Val Glu Ala Glu Val Ile Ala Ser Pro Tyr 
65                  70                  75                  80  


Glu Tyr Ile Leu Leu Ser Pro Thr Asp Val Pro Trp Leu Thr Gln Gln 
                85                  90                  95      


Pro Leu Gln Leu Thr Ile Leu Val Pro Leu Gln Glu Tyr Gln Glu Lys 
            100                 105                 110         


Ile Leu Ser Lys Thr Ala Leu Pro Glu Asp Gln Lys Gln Gln Leu Lys 
        115                 120                 125             


Thr Leu Phe Val Lys Tyr Asp Asn Leu Trp Gln His Trp Glu Asn Gln 
    130                 135                 140                 


Val Gly His Arg Lys Ile Arg Pro His Asn Ile Ala Thr Gly Asp Tyr 
145                 150                 155                 160 


Pro Pro Arg Pro Gln Lys Gln Tyr Pro Ile Asn Pro Lys Ala Lys Pro 
                165                 170                 175     


Ser Ile Gln Ile Val Ile Asp Asp Leu Leu Lys Gln Gly Val Leu Thr 
            180                 185                 190         


Pro Gln Asn Ser Thr Met Asn Thr Pro Val Tyr Pro Val Pro Lys Pro 
        195                 200                 205             


Asp Gly Arg Trp Arg Met Val Leu Asp Tyr Arg Glu Val Asn Lys Thr 
    210                 215                 220                 


Ile Pro Leu Thr Ala Ala Gln Asn Gln His Ser Ala Gly Ile Leu Ala 
225                 230                 235                 240 


Thr Ile Val Arg Gln Lys Tyr Lys Thr Thr Leu Asp Leu Ala Asn Gly 
                245                 250                 255     


Phe Trp Ala His Pro Ile Thr Pro Glu Ser Tyr Trp Leu Thr Ala Phe 
            260                 265                 270         


Thr Trp Gln Gly Lys Gln Tyr Cys Trp Thr Arg Leu Pro Gln Gly Phe 
        275                 280                 285             


Leu Asn Ser Pro Ala Leu Phe Thr Ala Asp Val Val Asp Leu Leu Lys 
    290                 295                 300                 


Glu Ile Pro Asn Val Gln Val Tyr Val Asp Asp Ile Tyr Leu Ser His 
305                 310                 315                 320 


Asp Asp Pro Lys Glu His Val Gln Gln Leu Glu Lys Val Phe Gln Ile 
                325                 330                 335     


Leu Leu Gln Ala Gly Tyr Val Val Ser Leu Lys Lys Ser Glu Ile Gly 
            340                 345                 350         


Gln Lys Thr Val Glu Phe Leu Gly Phe Asn Ile Thr Lys Glu Gly Arg 
        355                 360                 365             


Gly Leu Thr Asp Thr Phe Lys Thr Lys Leu Leu Asn Ile Thr Pro Pro 
    370                 375                 380                 


Lys Asp Leu Lys Gln Leu Gln Ser Ile Leu Gly Leu Leu Asn Phe Ala 
385                 390                 395                 400 


Arg Asn Phe Ile Pro Asn Phe Ala Glu Leu Val Gln Pro Leu Tyr Asn 
                405                 410                 415     


Leu Ile Ala Ser Ala Lys Gly Lys Tyr Ile Glu Trp Ser Glu Glu Asn 
            420                 425                 430         


Thr Lys Gln Leu Asn Met Val Ile Glu Ala Leu Asn Thr Ala Ser Asn 
        435                 440                 445             


Leu Glu Glu Arg Leu Pro Glu Gln Arg Leu Val Ile Lys Val Asn Thr 
    450                 455                 460                 


Ser Pro Ser Ala Gly Tyr Val Arg Tyr Tyr Asn Glu Thr Gly Lys Lys 
465                 470                 475                 480 


Pro Ile Met Tyr Leu Asn Tyr Val Phe Ser Lys Ala Glu Leu Lys Phe 
                485                 490                 495     


Ser Met Leu Glu Lys Leu Leu Thr Thr Met His Lys Ala Leu Ile Lys 
            500                 505                 510         


Ala Met Asp Leu Ala Met Gly Gln Glu Ile Leu Val Tyr Ser Pro Ile 
        515                 520                 525             


Val Ser Met Thr Lys Ile Gln Lys Thr Pro Leu Pro Glu Arg Lys Ala 
    530                 535                 540                 


Leu Pro Ile Arg Trp Ile Thr Trp Met Thr Tyr Leu Glu Asp Pro Arg 
545                 550                 555                 560 


Ile Gln Phe His Tyr Asp Lys Thr Leu Pro Glu Leu Lys His Ile Pro 
                565                 570                 575     


Asp Val Tyr Thr Ser Ser Gln Ser Pro Val Lys His Pro Ser Gln Tyr 
            580                 585                 590         


Glu Gly Val Phe Tyr Thr Asp Gly Ser Ala Ile Lys Ser Pro Asp Pro 
        595                 600                 605             


Thr Lys Ser Asn Asn Ala Gly Met Gly Ile Val His Ala Thr Tyr Lys 
    610                 615                 620                 


Pro Glu Tyr Gln Val Leu Asn Gln Trp Ser Ile Pro Leu Gly Asn His 
625                 630                 635                 640 


Thr Ala Gln Met Ala Glu Ile Ala Ala Val Glu Phe Ala Cys Lys Lys 
                645                 650                 655     


Ala Leu Lys Ile Pro Gly Pro Val Leu Val Ile Thr Asp Ser Phe Tyr 
            660                 665                 670         


Val Ala Glu Ser Ala Asn Lys Glu Leu Pro Tyr Trp Lys Ser Asn Gly 
        675                 680                 685             


Phe Val Asn Asn Lys Lys Lys Pro Leu Lys His Ile Ser Lys Trp Lys 
    690                 695                 700                 


Ser Ile Ala Glu Cys Leu Ser Met Lys Pro Asp Ile Thr Ile Gln His 
705                 710                 715                 720 


Glu Lys Gly His Gln Pro Thr Asn Thr Ser Ile His Thr Glu Gly Asn 
                725                 730                 735     


Ala Leu Ala Asp Lys Leu Ala Thr Gln Gly Ser Tyr Val Val Asn Cys 
            740                 745                 750         


Asn Thr Lys Lys Pro Asn Leu Asp Ala Glu Leu Asp Gln Leu Leu Gln 
        755                 760                 765             


Gly His Tyr Ile Lys Gly Tyr Pro Lys Gln Tyr Thr Tyr Phe Leu Glu 
    770                 775                 780                 


Asp Gly Lys Val Lys Val Ser Arg Pro Glu Gly Val Lys Ile Ile Pro 
785                 790                 795                 800 


Pro Gln Ser Asp Arg Gln Lys Ile Val Leu Gln Ala His Asn Leu Ala 
                805                 810                 815     


His Thr Gly Arg Glu Ala Thr Leu Leu Lys Ile Ala Asn Leu Tyr Trp 
            820                 825                 830         


Trp Pro Asn Met Arg Lys Asp Val Val Lys Gln Leu Gly Arg Cys Gln 
        835                 840                 845             


Gln Cys Leu Ile Thr Asn Ala Ser Asn Lys Ala Ser Gly Pro Ile Leu 
    850                 855                 860                 


Arg Pro Asp Arg Pro Gln Lys Pro Phe Asp Lys Phe Phe Ile Asp Tyr 
865                 870                 875                 880 


Ile Gly Pro Leu Pro Pro Ser Gln Gly Tyr Leu Tyr Val Leu Val Val 
                885                 890                 895     


Val Asp Gly Met Thr Gly Phe Thr Trp Leu Tyr Pro Thr Lys Ala Pro 
            900                 905                 910         


Ser Thr Ser Ala Thr Val Lys Ser Leu Asn Val Leu Thr Ser Ile Ala 
        915                 920                 925             


Ile Pro Lys Val Ile His Ser Asp Gln Gly Ala Ala Phe Thr Ser Ser 
    930                 935                 940                 


Thr Phe Ala Glu Trp Ala Lys Glu Arg Gly Ile His Leu Glu Phe Ser 
945                 950                 955                 960 


Thr Pro Tyr His Pro Gln Ser Ser Gly Lys Val Glu Arg Lys Asn Ser 
                965                 970                 975     


Asp Ile Lys Arg Leu Leu Thr Lys Leu Leu Val Gly Arg Pro Thr Lys 
            980                 985                 990         


Trp Tyr Asp Leu Leu Pro Val Val Gln Leu Ala Leu Asn Asn Thr Tyr 
        995                 1000                1005            


Ser Pro Val Leu Lys Tyr Thr Pro His Gln Leu Leu Phe Gly Ile Asp 
    1010                1015                1020                


Ser Asn Thr Pro Phe Ala Asn Gln Asp Thr Leu Asp Leu Thr Arg Glu 
1025                1030                1035                1040


Glu Glu Leu Ser Leu Leu Gln Glu Ile Arg Thr Ser Leu Tyr His Pro 
                1045                1050                1055    


Ser Thr Pro Pro Ala Ser Ser Arg Ser Trp Ser Pro Val Val Gly Gln 
            1060                1065                1070        


Leu Val Gln Glu Arg Val Ala Arg Pro Ala Ser Leu Arg Pro Arg Trp 
        1075                1080                1085            


His Lys Pro Ser Thr Val Leu Lys Val Leu Asn Pro Arg Thr Val Val 
    1090                1095                1100                


Ile Leu Asp His Leu Gly Asn Asn Arg Thr Val Ser Ile Asp Asn Leu 
1105                1110                1115                1120


Lys Pro Thr Ser His Gln Asn Gly Thr Thr Asn Asp Thr Ala Thr Met 
                1125                1130                1135    


Asp His Leu Glu Lys Asn Glu 
            1140            


<210>  14

<211>  1143
<212>  PRT
<213>  Human foamy virus

<220>
<223>  Pol (GenBank: CAA68999.1)

<400>  14
Met Asn Pro Leu Gln Leu Leu Gln Pro Leu Pro Ala Glu Ile Lys Gly 
1               5                   10                  15      


Thr Lys Leu Leu Ala His Trp Asp Ser Gly Ala Thr Ile Thr Cys Ile 
            20                  25                  30          


Pro Glu Ser Phe Leu Glu Asp Glu Gln Pro Ile Lys Lys Thr Leu Ile 
        35                  40                  45              


Lys Thr Ile His Gly Glu Lys Gln Gln Asn Val Tyr Tyr Val Thr Phe 
    50                  55                  60                  


Lys Val Lys Gly Arg Lys Val Glu Ala Glu Val Ile Ala Ser Pro Tyr 
65                  70                  75                  80  


Glu Tyr Ile Leu Leu Ser Pro Thr Asp Val Pro Trp Leu Thr Gln Gln 
                85                  90                  95      


Pro Leu Gln Leu Thr Ile Leu Val Pro Leu Gln Glu Tyr Gln Glu Lys 
            100                 105                 110         


Ile Leu Ser Lys Thr Ala Leu Pro Glu Asp Gln Lys Gln Gln Leu Lys 
        115                 120                 125             


Thr Leu Phe Val Lys Tyr Asp Asn Leu Trp Gln His Trp Glu Asn Gln 
    130                 135                 140                 


Val Gly His Arg Lys Ile Arg Pro His Asn Ile Ala Thr Gly Asp Tyr 
145                 150                 155                 160 


Pro Pro Arg Pro Gln Lys Gln Tyr Pro Ile Asn Pro Lys Ala Lys Pro 
                165                 170                 175     


Ser Ile Gln Ile Val Ile Asp Asp Leu Leu Lys Gln Gly Val Leu Thr 
            180                 185                 190         


Pro Gln Asn Ser Thr Met Asn Thr Pro Val Tyr Pro Val Pro Lys Pro 
        195                 200                 205             


Asp Gly Arg Trp Arg Met Val Leu Asp Tyr Arg Glu Val Asn Lys Thr 
    210                 215                 220                 


Ile Pro Leu Thr Ala Ala Gln Asn Gln His Ser Ala Gly Ile Leu Ala 
225                 230                 235                 240 


Thr Ile Val Arg Gln Lys Tyr Lys Thr Thr Leu Asp Leu Ala Asn Gly 
                245                 250                 255     


Phe Trp Ala His Pro Ile Thr Pro Glu Ser Tyr Trp Leu Thr Ala Phe 
            260                 265                 270         


Thr Trp Gln Gly Lys Gln Tyr Cys Trp Thr Arg Leu Pro Gln Gly Phe 
        275                 280                 285             


Leu Asn Ser Pro Ala Leu Phe Thr Ala Asp Val Val Asp Leu Leu Lys 
    290                 295                 300                 


Glu Ile Pro Asn Val Gln Val Tyr Val Asp Asp Ile Tyr Leu Ser His 
305                 310                 315                 320 


Asp Asp Pro Lys Glu His Val Gln Gln Leu Glu Lys Val Phe Gln Ile 
                325                 330                 335     


Leu Leu Gln Ala Gly Tyr Val Val Ser Leu Lys Lys Ser Glu Ile Gly 
            340                 345                 350         


Gln Lys Thr Val Glu Phe Leu Gly Phe Asn Ile Thr Lys Glu Gly Arg 
        355                 360                 365             


Gly Leu Thr Asp Thr Phe Lys Thr Lys Leu Leu Asn Ile Thr Pro Pro 
    370                 375                 380                 


Lys Asp Leu Lys Gln Leu Gln Ser Ile Leu Gly Leu Leu Asn Phe Ala 
385                 390                 395                 400 


Arg Asn Phe Ile Pro Asn Phe Ala Glu Leu Val Gln Pro Leu Tyr Asn 
                405                 410                 415     


Leu Ile Ala Ser Ala Lys Gly Lys Tyr Ile Glu Trp Ser Glu Glu Asn 
            420                 425                 430         


Thr Lys Gln Leu Asn Met Val Ile Glu Ala Leu Asn Thr Ala Ser Asn 
        435                 440                 445             


Leu Glu Glu Arg Leu Pro Glu Gln Arg Leu Val Ile Lys Val Asn Thr 
    450                 455                 460                 


Ser Pro Ser Ala Gly Tyr Val Arg Tyr Tyr Asn Glu Thr Gly Lys Lys 
465                 470                 475                 480 


Pro Ile Met Tyr Leu Asn Tyr Val Phe Ser Lys Ala Glu Leu Lys Phe 
                485                 490                 495     


Ser Met Leu Glu Lys Leu Leu Thr Thr Met His Lys Ala Leu Ile Lys 
            500                 505                 510         


Ala Met Asp Leu Ala Met Gly Gln Glu Ile Leu Val Tyr Ser Pro Ile 
        515                 520                 525             


Val Ser Met Thr Lys Ile Gln Lys Thr Pro Leu Pro Glu Arg Lys Ala 
    530                 535                 540                 


Leu Pro Ile Arg Trp Ile Thr Trp Met Thr Tyr Leu Glu Asp Pro Arg 
545                 550                 555                 560 


Ile Gln Phe His Tyr Asp Lys Thr Leu Pro Glu Leu Lys His Ile Pro 
                565                 570                 575     


Asp Val Tyr Thr Ser Ser Gln Ser Pro Val Lys His Pro Ser Gln Tyr 
            580                 585                 590         


Glu Gly Val Phe Tyr Thr Asp Gly Ser Ala Ile Lys Ser Pro Asp Pro 
        595                 600                 605             


Thr Lys Ser Asn Asn Ala Gly Met Gly Ile Val His Ala Thr Tyr Lys 
    610                 615                 620                 


Pro Glu Tyr Gln Val Leu Asn Gln Trp Ser Ile Pro Leu Gly Asn His 
625                 630                 635                 640 


Thr Ala Gln Met Ala Glu Ile Ala Ala Val Glu Phe Ala Cys Lys Lys 
                645                 650                 655     


Ala Leu Lys Ile Pro Gly Pro Val Leu Val Ile Thr Asp Ser Phe Tyr 
            660                 665                 670         


Val Ala Glu Ser Ala Asn Lys Glu Leu Pro Tyr Trp Lys Ser Asn Gly 
        675                 680                 685             


Phe Val Asn Asn Lys Lys Lys Pro Leu Lys His Ile Ser Lys Trp Lys 
    690                 695                 700                 


Ser Ile Ala Glu Cys Leu Ser Met Lys Pro Asp Ile Thr Ile Gln His 
705                 710                 715                 720 


Glu Lys Gly Ile Ser Leu Gln Ile Pro Val Phe Ile Leu Lys Gly Asn 
                725                 730                 735     


Ala Leu Ala Asp Lys Leu Ala Thr Gln Gly Ser Tyr Val Val Asn Cys 
            740                 745                 750         


Asn Thr Lys Lys Pro Asn Leu Asp Ala Glu Leu Asp Gln Leu Leu Gln 
        755                 760                 765             


Gly His Tyr Ile Lys Gly Tyr Pro Lys Gln Tyr Thr Tyr Phe Leu Glu 
    770                 775                 780                 


Asp Gly Lys Val Lys Val Ser Arg Pro Glu Gly Val Lys Ile Ile Pro 
785                 790                 795                 800 


Pro Gln Ser Asp Arg Gln Lys Ile Val Leu Gln Ala His Asn Leu Ala 
                805                 810                 815     


His Thr Gly Arg Glu Ala Thr Leu Leu Lys Ile Ala Asn Leu Tyr Trp 
            820                 825                 830         


Trp Pro Asn Met Arg Lys Asp Val Val Lys Gln Leu Gly Arg Cys Gln 
        835                 840                 845             


Gln Cys Leu Ile Thr Asn Ala Ser Asn Lys Ala Ser Gly Pro Ile Leu 
    850                 855                 860                 


Arg Pro Asp Arg Pro Gln Lys Pro Phe Asp Lys Phe Phe Ile Asp Tyr 
865                 870                 875                 880 


Ile Gly Pro Leu Pro Pro Ser Gln Gly Tyr Leu Tyr Val Leu Val Val 
                885                 890                 895     


Val Asp Gly Met Thr Gly Phe Thr Trp Leu Tyr Pro Thr Lys Ala Pro 
            900                 905                 910         


Ser Thr Ser Ala Thr Val Lys Ser Leu Asn Val Leu Thr Ser Ile Ala 
        915                 920                 925             


Ile Pro Lys Val Ile His Ser Asp Gln Gly Ala Ala Phe Thr Ser Ser 
    930                 935                 940                 


Thr Phe Ala Glu Trp Ala Lys Glu Arg Gly Ile His Leu Glu Phe Ser 
945                 950                 955                 960 


Thr Pro Tyr His Pro Gln Ser Gly Ser Lys Val Glu Arg Lys Asn Ser 
                965                 970                 975     


Asp Ile Lys Arg Leu Leu Thr Lys Leu Leu Val Gly Arg Pro Thr Lys 
            980                 985                 990         


Trp Tyr Asp Leu Leu Pro Val Val Gln Leu Ala Leu Asn Asn Thr Tyr 
        995                 1000                1005            


Ser Pro Val Leu Lys Tyr Thr Pro His Gln Leu Leu Phe Gly Ile Asp 
    1010                1015                1020                


Ser Asn Thr Pro Phe Ala Asn Gln Asp Thr Leu Asp Leu Thr Arg Glu 
1025                1030                1035                1040


Glu Glu Leu Ser Leu Leu Gln Glu Ile Arg Thr Ser Leu Tyr His Pro 
                1045                1050                1055    


Ser Thr Pro Pro Ala Ser Ser Arg Ser Trp Ser Pro Val Val Gly Gln 
            1060                1065                1070        


Leu Val Gln Glu Arg Val Ala Arg Pro Ala Ser Leu Arg Pro Arg Trp 
        1075                1080                1085            


His Lys Pro Ser Thr Val Leu Lys Val Leu Asn Pro Arg Thr Val Val 
    1090                1095                1100                


Ile Leu Asp His Leu Gly Asn Asn Arg Thr Val Ser Ile Asp Asn Leu 
1105                1110                1115                1120


Lys Pro Thr Ser His Gln Asn Gly Thr Thr Asn Asp Thr Ala Thr Met 
                1125                1130                1135    


Asp His Leu Glu Lys Asn Glu 
            1140            


<210>  15

<211>  1156
<212>  PRT
<213>  Macaque simian foamy virus

<220>
<223>  Pol (NCBI Reference: YP_001961122.1)

<400>  15
Met Asp Leu Leu Lys Pro Leu Thr Val Glu Arg Lys Gly Val Lys Ile 
1               5                   10                  15      


Lys Gly Tyr Trp Asp Ser Gln Ala Asp Ile Thr Cys Val Pro Lys Asp 
            20                  25                  30          


Leu Leu Gln Gly Glu Glu Pro Val Arg Gln Gln Asn Val Thr Thr Ile 
        35                  40                  45              


His Gly Thr Gln Glu Gly Asp Val Tyr Tyr Val Asn Leu Lys Ile Asp 
    50                  55                  60                  


Gly Arg Arg Ile Asn Thr Glu Val Ile Gly Thr Thr Leu Asp Tyr Ala 
65                  70                  75                  80  


Ile Ile Thr Pro Gly Asp Val Pro Trp Ile Leu Lys Lys Pro Leu Glu 
                85                  90                  95      


Leu Thr Ile Lys Leu Asp Leu Glu Glu Gln Gln Gly Thr Leu Leu Asn 
            100                 105                 110         


Asn Ser Ile Leu Ser Lys Lys Gly Lys Glu Glu Leu Lys Gln Leu Phe 
        115                 120                 125             


Glu Lys Tyr Ser Ala Leu Trp Gln Ser Trp Glu Asn Gln Val Gly His 
    130                 135                 140                 


Arg Arg Ile Arg Pro His Lys Ile Ala Thr Gly Thr Val Lys Pro Thr 
145                 150                 155                 160 


Pro Gln Lys Gln Tyr His Ile Asn Pro Lys Ala Lys Pro Asp Ile Gln 
                165                 170                 175     


Ile Val Ile Asn Asp Leu Leu Lys Gln Gly Val Leu Ile Gln Lys Glu 
            180                 185                 190         


Ser Thr Met Asn Thr Pro Val Tyr Pro Val Pro Lys Pro Asn Gly Arg 
        195                 200                 205             


Trp Arg Met Val Leu Asp Tyr Arg Ala Val Asn Lys Val Thr Pro Leu 
    210                 215                 220                 


Ile Ala Val Gln Asn Gln His Ser Tyr Gly Ile Leu Gly Ser Leu Phe 
225                 230                 235                 240 


Lys Gly Arg Tyr Lys Thr Thr Ile Asp Leu Ser Asn Gly Phe Trp Ala 
                245                 250                 255     


His Pro Ile Val Pro Glu Asp Tyr Trp Ile Thr Ala Phe Thr Trp Gln 
            260                 265                 270         


Gly Lys Gln Tyr Cys Trp Thr Val Leu Pro Gln Gly Phe Leu Asn Ser 
        275                 280                 285             


Pro Gly Leu Phe Thr Gly Asp Val Val Asp Leu Leu Gln Gly Ile Pro 
    290                 295                 300                 


Asn Val Glu Val Tyr Val Asp Asp Val Tyr Ile Ser His Asp Ser Glu 
305                 310                 315                 320 


Lys Glu His Leu Glu Tyr Leu Asp Ile Leu Phe Asn Arg Leu Lys Glu 
                325                 330                 335     


Ala Gly Tyr Ile Ile Ser Leu Lys Lys Ser Asn Ile Ala Asn Ser Ile 
            340                 345                 350         


Val Asp Phe Leu Gly Phe Gln Ile Thr Asn Glu Gly Arg Gly Leu Thr 
        355                 360                 365             


Asp Thr Phe Lys Glu Lys Leu Glu Asn Ile Thr Ala Pro Thr Thr Leu 
    370                 375                 380                 


Lys Gln Leu Gln Ser Ile Leu Gly Leu Leu Asn Phe Ala Arg Asn Phe 
385                 390                 395                 400 


Ile Pro Asp Phe Thr Glu Leu Ile Ala Pro Leu Tyr Ala Leu Ile Pro 
                405                 410                 415     


Lys Ser Thr Lys Asn Tyr Val Pro Trp Gln Ile Glu His Ser Thr Thr 
            420                 425                 430         


Leu Glu Thr Leu Ile Thr Lys Leu Asn Gly Ala Glu Tyr Leu Gln Gly 
        435                 440                 445             


Arg Lys Gly Asp Lys Thr Leu Ile Met Lys Val Asn Ala Ser Tyr Thr 
    450                 455                 460                 


Thr Gly Tyr Ile Arg Tyr Tyr Asn Glu Gly Glu Lys Lys Pro Ile Ser 
465                 470                 475                 480 


Tyr Val Ser Ile Val Phe Ser Lys Thr Glu Leu Lys Phe Thr Glu Leu 
                485                 490                 495     


Glu Lys Leu Leu Thr Thr Val His Lys Gly Leu Leu Lys Ala Leu Asp 
            500                 505                 510         


Leu Ser Met Gly Gln Asn Ile His Val Tyr Ser Pro Ile Val Ser Met 
        515                 520                 525             


Gln Asn Ile Gln Lys Thr Pro Gln Thr Ala Lys Lys Ala Leu Ala Ser 
    530                 535                 540                 


Arg Trp Leu Ser Trp Leu Ser Tyr Leu Glu Asp Pro Arg Ile Arg Phe 
545                 550                 555                 560 


Phe Tyr Asp Pro Gln Met Pro Ala Leu Lys Asp Leu Pro Ala Val Asp 
                565                 570                 575     


Thr Gly Lys Asp Asn Lys Lys His Pro Ser Asn Phe Gln His Ile Phe 
            580                 585                 590         


Tyr Thr Asp Gly Ser Ala Ile Thr Ser Pro Thr Lys Glu Gly His Leu 
        595                 600                 605             


Asn Ala Gly Met Gly Ile Val Tyr Phe Ile Asn Lys Asp Gly Asn Leu 
    610                 615                 620                 


Gln Lys Gln Gln Glu Trp Ser Ile Ser Leu Gly Asn His Thr Ala Gln 
625                 630                 635                 640 


Phe Ala Glu Ile Ala Ala Phe Glu Phe Ala Leu Lys Lys Cys Leu Pro 
                645                 650                 655     


Leu Gly Gly Asn Ile Leu Val Val Thr Asp Ser Asn Tyr Val Ala Lys 
            660                 665                 670         


Ala Tyr Asn Glu Glu Leu Asp Val Trp Ala Ser Asn Gly Phe Val Asn 
        675                 680                 685             


Asn Arg Lys Lys Pro Leu Lys His Ile Ser Lys Trp Lys Ser Val Ala 
    690                 695                 700                 


Asp Leu Lys Arg Leu Arg Pro Asp Val Val Val Thr His Glu Pro Gly 
705                 710                 715                 720 


His Gln Lys Leu Asp Ser Ser Pro His Ala Tyr Gly Asn Asn Leu Ala 
                725                 730                 735     


Asp Gln Leu Ala Thr Gln Ala Ser Phe Lys Val His Met Thr Lys Asn 
            740                 745                 750         


Pro Lys Leu Asp Ile Glu Gln Ile Lys Ala Ile Gln Ala Cys Gln Asn 
        755                 760                 765             


Asn Glu Arg Leu Pro Val Gly Tyr Pro Lys Gln Tyr Thr Tyr Glu Leu 
    770                 775                 780                 


Gln Asn Asn Lys Cys Met Val Leu Arg Lys Asp Gly Trp Arg Glu Ile 
785                 790                 795                 800 


Pro Pro Ser Arg Glu Arg Tyr Lys Leu Ile Lys Glu Ala His Asn Ile 
                805                 810                 815     


Ser His Ala Gly Arg Glu Ala Val Leu Leu Lys Ile Gln Glu Asn Tyr 
            820                 825                 830         


Trp Trp Pro Lys Met Lys Lys Asp Ile Ser Ser Phe Leu Ser Thr Cys 
        835                 840                 845             


Asn Val Cys Lys Met Val Asn Pro Leu Asn Leu Lys Pro Ile Ser Pro 
    850                 855                 860                 


Gln Ala Ile Val His Pro Thr Lys Pro Phe Asp Lys Phe Tyr Met Asp 
865                 870                 875                 880 


Tyr Ile Gly Pro Leu Pro Pro Ser Glu Gly Tyr Val His Val Leu Val 
                885                 890                 895     


Val Val Asp Ala Ala Thr Gly Phe Thr Trp Leu Tyr Pro Thr Lys Ala 
            900                 905                 910         


Gln Thr Ser Lys Ala Thr Ile Lys Val Leu Asn His Leu Thr Gly Leu 
        915                 920                 925             


Ala Ile Pro Lys Val Leu His Ser Asp Gln Gly Ser Ala Phe Thr Ser 
    930                 935                 940                 


Glu Glu Phe Ala Gln Trp Ala Lys Glu Arg Asn Ile Gln Leu Glu Phe 
945                 950                 955                 960 


Ser Thr Pro Tyr His Pro Gln Ser Ser Gly Lys Val Glu Arg Lys Asn 
                965                 970                 975     


Ser Glu Ile Lys Lys Leu Leu Thr Lys Leu Leu Val Gly Arg Pro Leu 
            980                 985                 990         


Lys Trp Tyr Asn Leu Ile Ser Ser Val Gln Leu Ala Leu Asn Asn Thr 
        995                 1000                1005            


His Val Val Ser Thr Lys Tyr Thr Pro His Gln Leu Met Phe Gly Ile 
    1010                1015                1020                


Asp Cys Asn Leu Pro Phe Ala Asn Lys Asp Thr Leu Asp Trp Thr Arg 
1025                1030                1035                1040


Glu Glu Glu Leu Ala Leu Leu Gln Glu Ile Arg Glu Ser Leu Gln His 
                1045                1050                1055    


Pro Val Gln Pro Pro Thr Cys Ser Gly Trp Ser Pro Tyr Val Gly Gln 
            1060                1065                1070        


Leu Val Gln Glu Arg Val Tyr Arg Pro Ser Gln Leu Arg Pro Lys Trp 
        1075                1080                1085            


Arg Lys Pro Thr Lys Val Leu Glu Ile Leu Asn Pro Arg Thr Val Ile 
    1090                1095                1100                


Ile Val Asp His Leu Gly Gln Arg Lys Ser Val Ser Ile Asp Asn Leu 
1105                1110                1115                1120


Lys Pro Thr Ala His Gln His Asn Gly Thr Arg Thr Cys Asp Asp Pro 
                1125                1130                1135    


Glu Gly Met Asp Gly Met Glu Cys Ser Gln Thr Thr Thr Glu Thr Ser 
            1140                1145                1150        


Val Asp Ser Ser 
        1155    


<210>  16

<211>  1143
<212>  PRT
<213>  African green monkey simian foamy virus

<220>
<223>  Pol (NCBI Reference: YP_001956722.2)

<400>  16
Met Asp Pro Leu Gln Leu Leu Gln Pro Leu Glu Ala Glu Ile Lys Gly 
1               5                   10                  15      


Thr Lys Leu Lys Ala His Trp Asp Ser Gly Ala Thr Ile Thr Cys Val 
            20                  25                  30          


Pro Gln Ala Phe Leu Glu Glu Glu Val Pro Ile Lys Asn Ile Trp Ile 
        35                  40                  45              


Lys Thr Ile His Gly Glu Lys Glu Gln Pro Val Tyr Tyr Leu Thr Phe 
    50                  55                  60                  


Lys Ile Gln Gly Arg Lys Val Glu Ala Glu Val Ile Ser Ser Pro Tyr 
65                  70                  75                  80  


Asp Tyr Ile Leu Val Ser Pro Ser Asp Ile Pro Trp Leu Met Lys Lys 
                85                  90                  95      


Pro Leu Gln Leu Thr Thr Leu Val Pro Leu Gln Glu Tyr Glu Glu Arg 
            100                 105                 110         


Leu Leu Lys Gln Thr Met Leu Thr Gly Ser Tyr Lys Glu Lys Leu Gln 
        115                 120                 125             


Ser Leu Phe Leu Lys Tyr Asp Ala Leu Trp Gln His Trp Glu Asn Gln 
    130                 135                 140                 


Val Gly His Arg Arg Ile Lys Pro His His Ile Ala Thr Gly Thr Val 
145                 150                 155                 160 


Asn Pro Arg Pro Gln Lys Gln Tyr Pro Ile Asn Pro Lys Ala Lys Ala 
                165                 170                 175     


Ser Ile Gln Thr Val Ile Asn Asp Leu Leu Lys Gln Gly Val Leu Ile 
            180                 185                 190         


Gln Gln Asn Ser Ile Met Asn Thr Pro Val Tyr Pro Val Pro Lys Pro 
        195                 200                 205             


Asp Gly Lys Trp Arg Met Val Leu Asp Tyr Arg Glu Val Asn Lys Thr 
    210                 215                 220                 


Ile Pro Leu Ile Ala Ala Gln Asn Gln His Ser Ala Gly Ile Leu Ser 
225                 230                 235                 240 


Ser Ile Phe Arg Gly Lys Tyr Lys Thr Thr Leu Asp Leu Ser Asn Gly 
                245                 250                 255     


Phe Trp Ala His Ser Ile Thr Pro Glu Ser Tyr Trp Leu Thr Ala Phe 
            260                 265                 270         


Thr Trp Leu Gly Gln Gln Tyr Cys Trp Thr Arg Leu Pro Gln Gly Phe 
        275                 280                 285             


Leu Asn Ser Pro Ala Leu Phe Thr Ala Asp Val Val Asp Leu Leu Lys 
    290                 295                 300                 


Glu Val Pro Asn Val Gln Val Tyr Val Asp Asp Ile Tyr Ile Ser His 
305                 310                 315                 320 


Asp Asp Pro Arg Glu His Leu Glu Gln Leu Glu Lys Val Phe Ser Leu 
                325                 330                 335     


Leu Leu Asn Ala Gly Tyr Val Val Ser Leu Lys Lys Ser Glu Ile Ala 
            340                 345                 350         


Gln His Glu Val Glu Phe Leu Gly Phe Asn Ile Thr Lys Glu Gly Arg 
        355                 360                 365             


Gly Leu Thr Glu Thr Phe Lys Gln Lys Leu Leu Asn Ile Thr Pro Pro 
    370                 375                 380                 


Arg Asp Leu Lys Gln Leu Gln Ser Ile Leu Gly Leu Leu Asn Phe Ala 
385                 390                 395                 400 


Arg Asn Phe Ile Pro Asn Phe Ser Glu Leu Val Lys Pro Leu Tyr Asn 
                405                 410                 415     


Ile Ile Ala Thr Ala Asn Gly Lys Tyr Ile Thr Trp Thr Thr Asp Asn 
            420                 425                 430         


Ser Gln Gln Leu Gln Asn Ile Ile Ser Met Leu Asn Ser Ala Glu Asn 
        435                 440                 445             


Leu Glu Glu Arg Asn Pro Glu Val Arg Leu Ile Met Lys Val Asn Thr 
    450                 455                 460                 


Ser Pro Ser Ala Gly Tyr Ile Arg Phe Tyr Asn Glu Phe Ala Lys Arg 
465                 470                 475                 480 


Pro Ile Met Tyr Leu Asn Tyr Val Tyr Thr Lys Ala Glu Val Lys Phe 
                485                 490                 495     


Thr Asn Thr Glu Lys Leu Leu Thr Thr Ile His Lys Gly Leu Ile Lys 
            500                 505                 510         


Ala Leu Asp Leu Gly Met Gly Gln Glu Ile Leu Val Tyr Ser Pro Ile 
        515                 520                 525             


Val Ser Met Thr Lys Ile Gln Lys Thr Pro Leu Pro Glu Arg Lys Ala 
    530                 535                 540                 


Leu Pro Ile Arg Trp Ile Thr Trp Met Ser Tyr Leu Glu Asp Pro Arg 
545                 550                 555                 560 


Ile Gln Phe His Tyr Asp Lys Thr Leu Pro Glu Leu Gln Gln Val Pro 
                565                 570                 575     


Thr Val Thr Asp Asp Ile Ile Ala Lys Ile Lys His Pro Ser Glu Phe 
            580                 585                 590         


Ser Met Val Phe Tyr Thr Asp Gly Ser Ala Ile Lys His Pro Asn Val 
        595                 600                 605             


Asn Lys Ser His Asn Ala Gly Met Gly Ile Ala Gln Val Gln Phe Lys 
    610                 615                 620                 


Pro Glu Phe Thr Val Ile Asn Thr Trp Ser Ile Pro Leu Gly Asp His 
625                 630                 635                 640 


Thr Ala Gln Leu Ala Glu Val Ala Ala Val Glu Phe Ala Cys Lys Lys 
                645                 650                 655     


Ala Leu Lys Ile Asp Gly Pro Val Leu Ile Val Thr Asp Ser Phe Tyr 
            660                 665                 670         


Val Ala Glu Ser Val Asn Lys Glu Leu Pro Tyr Trp Gln Ser Asn Gly 
        675                 680                 685             


Phe Phe Asn Asn Lys Lys Lys Pro Leu Lys His Val Ser Lys Trp Lys 
    690                 695                 700                 


Ser Ile Ala Asp Cys Ile Gln Leu Lys Pro Asp Ile Ile Ile Ile His 
705                 710                 715                 720 


Glu Lys Gly His Gln Pro Thr Ala Ser Thr Phe His Thr Glu Gly Asn 
                725                 730                 735     


Asn Leu Ala Asp Lys Leu Ala Thr Gln Gly Ser Tyr Val Val Asn Ile 
            740                 745                 750         


Asn Thr Thr Pro Ser Leu Asp Ala Glu Leu Asp Gln Leu Leu Gln Gly 
        755                 760                 765             


Gln Tyr Pro Lys Gly Phe Pro Lys His Tyr Gln Tyr Gln Leu Glu Asn 
    770                 775                 780                 


Gly Gln Val Met Val Thr Arg Pro Asn Gly Lys Arg Ile Ile Pro Pro 
785                 790                 795                 800 


Lys Ser Asp Arg Pro Gln Ile Ile Leu Gln Ala His Asn Ile Ala His 
                805                 810                 815     


Thr Gly Arg Asp Ser Thr Phe Leu Lys Val Ser Ser Lys Tyr Trp Trp 
            820                 825                 830         


Pro Asn Leu Arg Lys Asp Val Val Lys Val Ile Arg Gln Cys Lys Gln 
        835                 840                 845             


Cys Leu Val Thr Asn Ala Ala Thr Leu Ala Ala Pro Pro Ile Leu Arg 
    850                 855                 860                 


Pro Glu Arg Pro Val Lys Pro Phe Asp Lys Phe Phe Ile Asp Tyr Ile 
865                 870                 875                 880 


Gly Pro Leu Pro Pro Ser Asn Gly Tyr Leu His Val Leu Val Val Val 
                885                 890                 895     


Asp Ser Met Thr Gly Phe Val Trp Leu Tyr Pro Thr Lys Ala Pro Ser 
            900                 905                 910         


Thr Ser Ala Thr Val Lys Ala Leu Asn Met Leu Thr Ser Ile Ala Val 
        915                 920                 925             


Pro Lys Val Ile His Ser Asp Gln Gly Ala Ala Phe Thr Ser Ala Thr 
    930                 935                 940                 


Phe Ala Asp Trp Ala Lys Asn Lys Gly Ile Gln Leu Glu Phe Ser Thr 
945                 950                 955                 960 


Pro Tyr His Pro Gln Ser Ser Gly Lys Val Glu Arg Lys Asn Ser Asp 
                965                 970                 975     


Ile Lys Arg Leu Leu Thr Lys Leu Leu Val Gly Arg Pro Ala Lys Trp 
            980                 985                 990         


Tyr Asp Leu Leu Pro Val Val Gln Leu Ala Leu Asn Asn Ser Tyr Ser 
        995                 1000                1005            


Pro Ser Ser Lys Tyr Thr Pro His Gln Leu Leu Phe Gly Ile Asp Ser 
    1010                1015                1020                


Asn Thr Pro Phe Ala Asn Ser Asp Thr Leu Asp Leu Ser Arg Glu Glu 
1025                1030                1035                1040


Glu Leu Ser Leu Leu Gln Glu Ile Arg Ser Ser Leu Tyr Leu Pro Ser 
                1045                1050                1055    


Thr Pro Pro Ala Ser Ile Arg Ala Trp Ser Pro Ser Val Gly Gln Leu 
            1060                1065                1070        


Val Gln Glu Arg Val Ala Arg Pro Ala Ser Leu Arg Pro Arg Trp His 
        1075                1080                1085            


Lys Pro Thr Pro Val Leu Glu Val Ile Asn Pro Arg Ala Val Val Ile 
    1090                1095                1100                


Leu Asp His Leu Gly Asn Arg Arg Thr Val Ser Val Asp Asn Leu Lys 
1105                1110                1115                1120


Leu Thr Ala Tyr Gln Lys Asp Gly Thr Pro Asn Glu Ser Ala Ala Val 
                1125                1130                1135    


Val Ala Met Glu Lys Asp Glu 
            1140            


<210>  17

<211>  1134
<212>  PRT
<213>  Squirrel monkey foamy virus

<220>
<223>  Pol (GenBank: ADE05995.1)

<400>  17
Met Tyr Gln Pro Gln His Gln Leu Gln Val Glu Ile His Asp Gln Lys 
1               5                   10                  15      


Leu Ile Gly Tyr Trp Asp Thr Gly Ala Gln Ile Thr Cys Ile Pro Gln 
            20                  25                  30          


Val Tyr Leu Glu Gln Glu Lys Pro Ile Gly Lys His Val Ile Glu Thr 
        35                  40                  45              


Val Asn Gly Lys Thr Gln Arg Asp Ala Tyr Tyr Ile Lys Leu Lys Ile 
    50                  55                  60                  


Asn Gly Lys Lys Ile Glu Thr Glu Val Ile Pro Ser Pro Phe Ser Tyr 
65                  70                  75                  80  


Ala Leu Ile Thr Pro Asn Asp Ile Pro Trp Phe Lys Pro Gly Gly Ile 
                85                  90                  95      


Glu Leu Thr Glu Lys Leu Pro Ile Gln Asp Tyr Lys Asp Asn Ile Val 
            100                 105                 110         


Lys Arg Ala Asp Ile Thr Lys Glu Glu Lys Gly Met Leu Tyr Lys Leu 
        115                 120                 125             


Leu Asp Lys Tyr Asp Pro Leu Trp Gln Gln Trp Glu Asn Gln Val Gly 
    130                 135                 140                 


Asn Arg Gln Ile Thr Pro His Ile Ile Ala Thr Gly Thr Ile Asn Pro 
145                 150                 155                 160 


Lys Pro Gln Lys Gln Tyr His Ile Asn Pro Lys Ala Lys Pro Ser Ile 
                165                 170                 175     


Gln Ile Val Ile Asn Asp Leu Leu Lys Gln Gly Val Leu Lys Gln Gln 
            180                 185                 190         


Asn Ser Ile Met Asn Thr Pro Ile Tyr Pro Val Pro Lys Thr Glu Gly 
        195                 200                 205             


Lys Trp Arg Met Val Leu Asp Tyr Arg Ala Val Asn Lys Thr Ile Pro 
    210                 215                 220                 


Leu Ile Ala Ala Gln Asn Gln His Ser Ala Gly Ile Leu Thr Asn Leu 
225                 230                 235                 240 


Val Arg Gln Lys Tyr Lys Ser Thr Ile Asp Leu Ser Asn Gly Phe Trp 
                245                 250                 255     


Ala His Pro Ile Asp Gln Asp Ser Gln Trp Ile Thr Ala Phe Thr Trp 
            260                 265                 270         


Glu Gly Lys Gln Tyr Val Trp Thr Arg Leu Pro Gln Gly Phe Leu Asn 
        275                 280                 285             


Ser Pro Ala Leu Phe Thr Ala Asp Val Val Asp Leu Leu Lys Glu Ile 
    290                 295                 300                 


Pro Asn Val Asn Val Tyr Val Asp Asp Ile Tyr Val Ser Thr Glu Thr 
305                 310                 315                 320 


Ile Asn Gln His Phe Gln Val Leu Asp Lys Ile Phe Gln Lys Leu Leu 
                325                 330                 335     


Gln Ala Gly Tyr Val Val Ser Leu Lys Lys Ser Asn Leu Cys Arg Tyr 
            340                 345                 350         


Glu Val Thr Phe Leu Gly Phe Thr Ile Ser Lys Tyr Gly Arg Gly Leu 
        355                 360                 365             


Thr Glu Glu Phe Gln Glu Lys Leu Arg Asn Ile Ser Pro Pro Asn Ser 
    370                 375                 380                 


Leu Lys Gln Leu Gln Ser Ile Leu Gly Leu Leu Asn Phe Ala Arg Asn 
385                 390                 395                 400 


Phe Ile Pro Asn Phe Ser Glu Leu Ile Lys Pro Leu Tyr Glu Leu Ile 
                405                 410                 415     


Ser Thr Ala Gln Gly Gln Ser Ile Ser Trp Glu Pro Lys His Ser Gln 
            420                 425                 430         


Ala Leu Asn Asn Leu Ile Ile Ala Leu Asn His Ala Asp Asn Leu Glu 
        435                 440                 445             


Gln Arg Asn Gly Glu Val Pro Leu Val Ile Lys Ile Asn Ala Ser Asn 
    450                 455                 460                 


Thr Thr Gly Tyr Ile Arg Phe Tyr Asn Lys Asn Gly Lys Arg Pro Ile 
465                 470                 475                 480 


Ala Tyr Ala Ser His Val Phe Asn His Thr Glu Gln Lys Phe Thr Pro 
                485                 490                 495     


Val Glu Lys Leu Leu Thr Thr Met His Lys Ala Ile Ile Lys Gly Ile 
            500                 505                 510         


Asp Leu Ala Ile Gly Gln Pro Ile Glu Ile Tyr Ser Pro Ile Val Ser 
        515                 520                 525             


Met Gln Lys Leu Gln Lys Ile Thr Leu Pro Glu Arg Lys Ala Leu Ser 
    530                 535                 540                 


Thr Arg Trp Leu Ser Trp Leu Ser Tyr Ile Glu Asp Pro Arg Phe Leu 
545                 550                 555                 560 


Phe Ile Tyr Asp Lys Thr Leu Pro Asp Leu Lys Glu Met Pro Pro Thr 
                565                 570                 575     


Gln Thr Asp Asp Tyr Asn Pro Met Leu Pro Leu His Gln Tyr Leu Ala 
            580                 585                 590         


Val Phe Tyr Thr Asp Gly Ser Ser Ile Lys Ser Pro Asp Pro Thr Lys 
        595                 600                 605             


Thr His Ser Ser Gly Met Gly Ile Val Gln Ala Ile Tyr Glu Pro Asn 
    610                 615                 620                 


Phe Gln Ile Lys His Gln Trp Ser Ile Pro Leu Gly Asp His Thr Ala 
625                 630                 635                 640 


Gln Tyr Ala Glu Ile Ala Ala Val Glu Phe Ala Cys Lys Lys Ala Leu 
                645                 650                 655     


Gln Val Thr Gly Pro Val Leu Ile Val Thr Asp Ser Asp Tyr Val Ala 
            660                 665                 670         


Arg Ser Val Asn Asn Glu Leu Asn Phe Trp Arg Ser Asn Gly Phe Val 
        675                 680                 685             


Asn Asn Lys Lys Lys Pro Leu Lys His Ile Ser Lys Trp Lys Ser Ile 
    690                 695                 700                 


Ser Glu Ser Leu Leu Leu His Lys Asn Ile Thr Ile Val His Glu Pro 
705                 710                 715                 720 


Gly His Gln Pro Ser Ser Thr Ser Val His Thr Gln Gly Asn Ala Leu 
                725                 730                 735     


Ala Asp Lys Leu Ala Val Gln Gly Ser Tyr Thr Ile Asn Asn Ile Thr 
            740                 745                 750         


Ile Lys Pro Ser Leu Asp Thr Glu Leu Arg Ala Val Leu Glu Gly Lys 
        755                 760                 765             


Leu Pro Lys Gly Tyr Pro Lys Asn Leu Lys Tyr Glu Tyr Asn Ser Pro 
    770                 775                 780                 


Asn Leu Ile Val Ile Arg Lys Glu Gly Gln Arg Ile Ile Pro Pro Leu 
785                 790                 795                 800 


Ser Asp Arg Pro Lys Leu Val Lys Gln Ala His Glu Leu Ala His Thr 
                805                 810                 815     


Gly Arg Glu Ala Thr Leu Leu Arg Leu Gln Asn Gln Tyr Trp Trp Pro 
            820                 825                 830         


Lys Met Arg Lys Asp Val Ser His Cys Leu Arg Thr Cys Met Pro Cys 
        835                 840                 845             


Leu Gln Thr Asn Ser Thr Asn Leu Thr Thr Thr Arg Pro Phe Gln Gln 
    850                 855                 860                 


Ile Arg Pro Ser Lys Pro Phe Asp Lys Tyr Tyr Ile Asp Tyr Ile Gly 
865                 870                 875                 880 


Pro Leu Pro Pro Ser Glu Gly Tyr Ser Tyr Val Leu Val Val Val Asp 
                885                 890                 895     


Ser Ala Thr Gly Phe Cys Trp Leu Tyr Pro Thr Lys Ala Pro Ser Thr 
            900                 905                 910         


Arg Ala Thr Val Lys Ser Leu Asn Phe Leu Leu Gly Ile Ala Val Pro 
        915                 920                 925             


Lys Ile Leu His Ser Asp Gln Gly Ser Ala Phe Thr Ser Ser Asp Phe 
    930                 935                 940                 


Ala Asn Trp Ala Lys Glu Lys Glu Ile Thr Leu Glu Phe Ser Thr Pro 
945                 950                 955                 960 


Tyr His Pro Gln Ser Ser Gly Lys Val Glu Arg Lys Asn Gln Glu Ile 
                965                 970                 975     


Lys Lys Leu Leu Thr Lys Leu Leu Val Gly Arg Pro Ala Lys Trp Tyr 
            980                 985                 990         


Pro Leu Ile Pro Ser Val Gln Leu Ala Leu Asn Asn Thr Tyr Ser Pro 
        995                 1000                1005            


Lys Ile Lys Leu Thr Pro His Gln Leu Leu Phe Gly Val Asp Gly Asn 
    1010                1015                1020                


Ile Pro Phe Ala Asn Ser Asp Thr Leu Asp Leu Lys Arg Glu Glu Glu 
1025                1030                1035                1040


Leu Ala Leu Leu Ser Glu Ile Arg Thr Thr Leu Ser Thr Val Ser Pro 
                1045                1050                1055    


Glu Pro Phe Pro Ser Thr Ala Lys Thr Trp Thr Pro Ser Val Gly Leu 
            1060                1065                1070        


Leu Val Gln Glu Arg Val Tyr Arg Pro Ser Gln Leu Arg Pro Lys Trp 
        1075                1080                1085            


Lys Lys Pro Thr Pro Ile Leu Glu Val Leu Asn Glu Arg Thr Val Val 
    1090                1095                1100                


Ile Asp Asn Asn Gly Gln Arg Arg Thr Val Ser Val Asp Asn Leu Lys 
1105                1110                1115                1120


Tyr Thr Pro His Gln Lys Asp Gly Glu Thr Tyr Asp Ser Ser 
                1125                1130                


<210>  18

<211>  1153
<212>  PRT
<213>  equine foamy virus

<220>
<223>  Pol (NCBI Reference: NP_054716.1)

<400>  18
Met Gln Ala Leu Gln Pro Leu Gln Val Gln Ile Lys Gly Asn Ser Leu 
1               5                   10                  15      


Lys Gly Phe Tyr Asp Thr Gly Ala Glu Ile Thr Cys Val Pro Ala Ile 
            20                  25                  30          


Phe Leu Ile Glu Glu Glu Pro Ile Gly Glu Arg Thr Ile Gln Thr Ile 
        35                  40                  45              


His Gly Ile Thr Lys Glu Lys Val Tyr Tyr Leu Thr Phe Lys Ile Gln 
    50                  55                  60                  


Gly Arg Lys Leu Ala Ala Glu Val Ile Gly Thr Gln Leu Asp Tyr Val 
65                  70                  75                  80  


Ile Ile Ala Pro Ser Asp Ile Pro Trp Tyr Lys Lys Tyr Glu Leu Glu 
                85                  90                  95      


Leu Thr Ile Lys Ile Asp Ile Gln Lys Gln Gln Glu Gln Leu Leu His 
            100                 105                 110         


Thr Thr Asn Leu Ser Ser Glu Gly Lys Lys Tyr Leu Lys Asp Leu Phe 
        115                 120                 125             


Ile Lys Tyr Asp Asn Leu Trp Gln Lys Trp Glu Asn Gln Val Gly His 
    130                 135                 140                 


Arg Arg Ile Thr Pro His Lys Ile Ala Thr Gly Thr Leu Asn Pro Lys 
145                 150                 155                 160 


Pro Gln Lys Gln Tyr Arg Ile Asn Pro Lys Ala Lys Ala Asp Ile Gln 
                165                 170                 175     


Ile Val Ile Asp Asp Leu Leu Lys Gln Gly Val Leu Lys Gln Gln Thr 
            180                 185                 190         


Ser Pro Met Asn Thr Pro Val Tyr Pro Val Pro Lys Pro Asp Gly Arg 
        195                 200                 205             


Trp Arg Met Val Leu Asp Tyr Arg Ala Val Asn Lys Val Thr Pro Ala 
    210                 215                 220                 


Ile Ala Thr Gln Asn Cys His Ser Ala Ser Leu Leu Asn Thr Leu Tyr 
225                 230                 235                 240 


Arg Gly Gln Tyr Lys Thr Thr Leu Asp Leu Ala Asn Gly Phe Trp Ala 
                245                 250                 255     


His Pro Ile Gln Glu Ser Asp Gln Trp Ile Thr Ser Phe Thr Trp Asn 
            260                 265                 270         


Gly Lys Ser Tyr Val Trp Thr Thr Leu Pro Gln Gly Phe Leu Asn Ser 
        275                 280                 285             


Pro Ala Leu Phe Thr Ala Asp Val Val Asp Leu Leu Lys Asp Ile Pro 
    290                 295                 300                 


Asn Val Glu Val Tyr Val Asp Asp Val Tyr Phe Ser Asn Asp Thr Glu 
305                 310                 315                 320 


Glu Glu His Leu Lys Thr Met Asp Leu Leu Phe Gln Lys Leu Gln Thr 
                325                 330                 335     


Ala Gly Tyr Ile Val Ser Leu Lys Lys Ser Lys Leu Gly Gln His Thr 
            340                 345                 350         


Val Asp Phe Leu Gly Phe Gln Ile Thr Gln Thr Gly Arg Gly Leu Thr 
        355                 360                 365             


Asp Ser Tyr Lys Ser Lys Leu Leu Asp Ile Thr Pro Pro Asn Thr Leu 
    370                 375                 380                 


Lys Gln Leu Gln Ser Ile Leu Gly Leu Leu Asn Phe Ala Arg Asn Phe 
385                 390                 395                 400 


Ile Pro Asn Tyr Ser Glu Leu Ile Thr Pro Leu Tyr Gln Leu Ile Pro 
                405                 410                 415     


Leu Ala Lys Gly Ile Tyr Ile Pro Trp Glu Thr Lys His Thr Ala Ile 
            420                 425                 430         


Leu Gln Lys Ile Ile Lys Glu Leu Asn Ala Ser Glu Asn Leu Glu Gln 
        435                 440                 445             


Arg Lys Pro Asp Val Glu Leu Ile Val Lys Val His Val Ser Pro Thr 
    450                 455                 460                 


Ala Gly Tyr Ile Lys Phe Ala Asn Lys Gly Ser Ile Lys Pro Ile Ala 
465                 470                 475                 480 


Tyr His Asn Val Val Phe Ser Lys Thr Glu Leu Lys Phe Thr Ile Thr 
                485                 490                 495     


Glu Lys Val Met Thr Thr Ile His Lys Ala Leu Leu Lys Ala Phe Asp 
            500                 505                 510         


Leu Ala Met Gly Gln Pro Ile Trp Val Tyr Ser Pro Ile His Ser Met 
        515                 520                 525             


Thr Arg Ile Gln Lys Thr Pro Leu Thr Glu Arg Lys Ala Leu Ser Ile 
    530                 535                 540                 


Arg Trp Leu Lys Trp Gln Thr Tyr Phe Glu Asp Pro Arg Leu Ile Phe 
545                 550                 555                 560 


His Tyr Asp Asp Thr Leu Pro Asp Leu Gln Asn Leu Pro Gln Thr Thr 
                565                 570                 575     


Leu Gly Asn Glu Val Asp Ile Leu Pro Leu Ser Glu Tyr Glu Val Val 
            580                 585                 590         


Phe Tyr Thr Asp Gly Ser Ser Ile Lys Ser Pro Lys Lys Asp Lys Gln 
        595                 600                 605             


His Ser Ala Gly Met Gly Ile Ile Ala Val Arg Tyr Gln Pro Gln Met 
    610                 615                 620                 


Asn Ile Ile Gln Glu Trp Ser Ile Pro Leu Gly Asp His Thr Ala Gln 
625                 630                 635                 640 


Phe Ala Glu Ile Ala Ala Phe Glu Phe Ala Leu Lys Gln Ala Ile Arg 
                645                 650                 655     


Lys Met Gly Pro Val Leu Ile Val Thr Asp Ser Asp Tyr Val Ala Lys 
            660                 665                 670         


Ser Tyr Asn Gln Glu Leu Asp Phe Trp Val Ser Asn Gly Phe Val Asn 
        675                 680                 685             


Asn Lys Lys Lys Pro Leu Lys His Val Ser Lys Trp Lys Ser Ile Ala 
    690                 695                 700                 


Asp Cys Lys Lys His Lys Ala Asp Ile His Val Ile His Glu Pro Gly 
705                 710                 715                 720 


His Gln Asn Asp Leu Gln Ser Pro Tyr Ala Met Gly Asn Asn Ala Ala 
                725                 730                 735     


Asp Lys Leu Ala Val Lys Ala Ser Tyr Thr Val Phe Ser Val Gln Thr 
            740                 745                 750         


Leu Pro Ser Leu Asp Ala Glu Leu His Gln Leu Leu Asp Lys Gln Thr 
        755                 760                 765             


Pro Asn Pro Lys Gly Tyr Pro Ser Lys Tyr Glu Tyr Thr Leu Arg Asp 
    770                 775                 780                 


Gly Gln Val Tyr Val Lys Arg Thr Asp Gly Glu Lys Ile Ile Pro Ser 
785                 790                 795                 800 


Lys Asp Asp Arg Val Lys Ile Leu Glu Leu Ala His Lys Gly Pro Gly 
                805                 810                 815     


Ser Gly His Leu Gly Lys Asn Thr Met Tyr Ile Lys Ile Leu Asn Lys 
            820                 825                 830         


Tyr Trp Trp Pro Asn Leu Ile Lys Asp Ile Ser Lys Tyr Ile Arg Thr 
        835                 840                 845             


Cys Thr Asn Cys Ile Ile Thr Asn Thr Asp Asn Val Pro Asn Lys Ser 
    850                 855                 860                 


Tyr Ile Val Gln Glu Lys Thr Gly Leu Pro Phe Gln Lys Tyr Tyr Met 
865                 870                 875                 880 


Asp Tyr Ile Gly Pro Leu Pro Pro Ser Asp Gly Tyr Tyr His Val Leu 
                885                 890                 895     


Val Ile Val Asp Glu Gly Thr Gly Tyr Thr Trp Leu Tyr Pro Thr Lys 
            900                 905                 910         


Ala Gln Thr Ala Asn Ala Thr Val Lys Ala Leu Asn His Leu Thr Gly 
        915                 920                 925             


Thr Ala Ile Pro Lys Val Leu His Ser Asp Gln Gly Ser Ala Phe Thr 
    930                 935                 940                 


Ser Ala Thr Leu Val Ala Trp Ala Lys Asp Lys Gly Ile Gln Met Glu 
945                 950                 955                 960 


Tyr Ser Ser Pro Tyr His Pro Gln Ser Ser Gly Lys Val Glu Arg Lys 
                965                 970                 975     


Asn Ser Glu Ile Lys Arg Leu Leu Thr Lys Leu Leu Val Gly Arg Pro 
            980                 985                 990         


Thr Lys Trp Tyr Pro Leu Ile Pro Thr Val Gln Leu Ala Leu Asn Asn 
        995                 1000                1005            


Thr Pro Asn Ala Lys Ile Gly Lys Thr Pro His Gln Leu Met Tyr Gly 
    1010                1015                1020                


Val Asp Cys Asn Leu Pro Phe Gln Asp Leu Ser Thr Leu Asp Leu Thr 
1025                1030                1035                1040


Arg Glu Glu Gln Leu Ala Val Leu Gln Glu Ile Arg Thr Ala Leu Glu 
                1045                1050                1055    


Gln Pro Ala Gln His Pro Thr Leu Pro Lys Trp Thr Pro Cys Pro Gly 
            1060                1065                1070        


Leu Leu Val Gln Glu Arg Val Asn Arg Pro Ala Gln Leu Arg Pro Lys 
        1075                1080                1085            


Trp Lys Lys Pro Thr Pro Ile Leu Lys Val Leu Asn Pro Lys Thr Val 
    1090                1095                1100                


Val Ile Ala Gly Pro Gly Gly Gln Glu Arg Ile Val Ser Ile Asp Asn 
1105                1110                1115                1120


Leu Lys Lys Thr Pro His His Asp Thr Ser Asn Asp Ser Thr Arg Met 
                1125                1130                1135    


Asp Ala Val Glu Val Pro Thr Glu Cys Gln Gln Asp Gln Arg Gly His 
            1140                1145                1150        


Thr 
    


<210>  19

<211>  1220
<212>  PRT
<213>  Bovine foamy virus

<220>
<223>  Pol (GenBank: AFR79239.1)

<400>  19
Met Pro Ala Leu Arg Pro Leu Gln Val Glu Ile Lys Gly Asn His Leu 
1               5                   10                  15      


Lys Gly Tyr Trp Asp Ser Gly Ala Glu Ile Thr Cys Val Pro Ala Ile 
            20                  25                  30          


Tyr Val Ile Glu Glu Gln Pro Val Gly Lys Lys Leu Ile Thr Thr Ile 
        35                  40                  45              


His Asp Glu Lys Glu His Asp Val Tyr Tyr Val Glu Met Lys Val Glu 
    50                  55                  60                  


Lys Arg Lys Val Gln Cys Glu Val Ile Thr Thr Ala Leu Asp Tyr Val 
65                  70                  75                  80  


Leu Val Ala Pro Ile Asp Ile Pro Trp Tyr Lys Pro Gly Pro Leu Glu 
                85                  90                  95      


Leu Thr Ile Lys Ile Asp Val Glu Ser Gln Lys His Ala Leu Ile Thr 
            100                 105                 110         


Gly Ser Thr Leu Ser Pro Gln Gly Arg Met Arg Leu Lys Lys Leu Leu 
        115                 120                 125             


Asp Gln Tyr Gln Ala Leu Trp Gln Cys Trp Glu Asn Gln Val Gly His 
    130                 135                 140                 


Arg Arg Ile Glu Pro His Lys Ile Ala Thr Gly Thr Leu Lys Pro Arg 
145                 150                 155                 160 


Pro Gln Lys Gln Tyr His Val Asn Pro Arg Ala Lys Ala Asp Ile Gln 
                165                 170                 175     


Val Val Ile Asp Asp Leu Leu Arg Gln Gly Val Leu Arg Gln Gln Asn 
            180                 185                 190         


Ser Glu Met Asn Thr Pro Val Tyr Pro Val Pro Lys Ala Asp Gly Arg 
        195                 200                 205             


Trp Arg Met Val Leu Asp Tyr Arg Glu Val Asn Lys Val Thr Pro Leu 
    210                 215                 220                 


Val Ala Thr Gln Asn Cys His Ser Ala Ser Ile Leu Asn Thr Leu Tyr 
225                 230                 235                 240 


Arg Gly Pro Tyr Lys Ser Thr Leu Asp Leu Ala Asn Gly Phe Trp Ala 
                245                 250                 255     


His Pro Ile Lys Pro Glu Asp Tyr Trp Ile Thr Ala Phe Thr Trp Gly 
            260                 265                 270         


Gly Lys Thr Tyr Cys Trp Thr Val Leu Pro Gln Gly Phe Leu Asn Ser 
        275                 280                 285             


Pro Ala Leu Phe Thr Ala Asp Val Val Asp Ile Leu Lys Asp Ile Pro 
    290                 295                 300                 


Asn Val Gln Val Tyr Val Asp Asp Val Tyr Val Ser Ser Ala Thr Glu 
305                 310                 315                 320 


Gln Glu His Leu Asp Thr Leu Glu Ile Ile Phe Asn Arg Leu Ser Thr 
                325                 330                 335     


Ala Gly Tyr Ile Val Ser Leu Lys Lys Ser Lys Leu Ala Lys Glu Thr 
            340                 345                 350         


Val Glu Phe Leu Gly Phe Ser Ile Ser Gln Asn Gly Arg Gly Leu Thr 
        355                 360                 365             


Asp Ser Tyr Lys Gln Lys Leu Met Asp Leu Gln Pro Pro Thr Thr Leu 
    370                 375                 380                 


Arg Gln Leu Gln Ser Ile Leu Gly Leu Ile Asn Phe Ala Arg Asn Phe 
385                 390                 395                 400 


Leu Pro Asn Phe Ala Glu Leu Val Ala Pro Leu Tyr Gln Leu Ile Pro 
                405                 410                 415     


Lys Ala Lys Gly Gln Cys Ile Pro Trp Thr Met Asp His Thr Thr Gln 
            420                 425                 430         


Leu Lys Thr Ile Ile Gln Ala Leu Asn Ser Thr Glu Asn Leu Glu Glu 
        435                 440                 445             


Arg Arg Pro Asp Val Asp Leu Ile Met Lys Val His Ile Ser Asn Thr 
    450                 455                 460                 


Ala Gly Tyr Ile Arg Phe Tyr Asn His Gly Gly Gln Lys Pro Ile Ala 
465                 470                 475                 480 


Tyr Asn Asn Ala Leu Phe Thr Ser Thr Glu Leu Lys Phe Thr Pro Thr 
                485                 490                 495     


Glu Lys Ile Met Ala Thr Ile His Lys Gly Leu Leu Lys Ala Leu Asp 
            500                 505                 510         


Leu Ser Leu Gly Lys Glu Ile His Val Tyr Ser Ala Ile Ala Ser Met 
        515                 520                 525             


Thr Lys Leu Gln Lys Thr Pro Leu Thr Glu Arg Lys Ala Leu Ser Ile 
    530                 535                 540                 


Arg Trp Leu Lys Trp Gln Thr Tyr Phe Glu Asp Pro Arg Ile Lys Phe 
545                 550                 555                 560 


His His Asp Ala Thr Leu Pro Asp Leu Gln Asn Leu Pro Ile Pro Gln 
                565                 570                 575     


Gln Asp Thr Gly Lys Glu Val Thr Ile Leu Pro Leu Leu His Tyr Glu 
            580                 585                 590         


Ala Ile Phe Tyr Thr Asp Gly Ser Ala Ile Arg Ser Pro Lys Pro Asn 
        595                 600                 605             


Lys Thr His Ser Ala Gly Met Gly Ile Ile Gln Ala Lys Phe Glu Pro 
    610                 615                 620                 


Asp Phe Lys Ile Val His Leu Trp Ser Phe Pro Leu Gly Asp His Thr 
625                 630                 635                 640 


Ala Gln Tyr Ala Glu Ile Ala Ala Phe Glu Phe Ala Met Arg Arg Ala 
                645                 650                 655     


Thr Gly Ile Arg Gly Pro Val Leu Ile Val Thr Asp Ser Asn Tyr Val 
            660                 665                 670         


Ala Lys Ser Tyr Asn Glu Glu Leu Pro Tyr Trp Glu Ser Asn Gly Phe 
        675                 680                 685             


Val Asn Asn Lys Lys Lys Thr Leu Lys His Ile Ser Lys Trp Lys Thr 
    690                 695                 700                 


Ile Ala Glu Cys Lys Asn Leu Lys Ala Asp Ile His Val Ile His Glu 
705                 710                 715                 720 


Pro Gly His Gln Pro Ala Glu Ala Ser Pro His Ala Gln Gly Asn Ala 
                725                 730                 735     


Leu Ala Asp Lys Gln Ala Val Ser Gly Ser Tyr Lys Val Phe Ser Asn 
            740                 745                 750         


Glu Leu Lys Pro Ser Leu Asp Ala Glu Leu Glu Gln Val Leu Ser Ala 
        755                 760                 765             


Gly Arg Pro Asn Pro Gln Gly Tyr Pro Asn Lys Tyr Glu Tyr Lys Leu 
    770                 775                 780                 


Val Asn Gly Leu Cys Tyr Val Asp Arg Arg Gly Glu Glu Gly Leu Lys 
785                 790                 795                 800 


Ile Ile Pro Pro Lys Ala Asp Arg Ala Lys Leu Cys Gln Leu Ala His 
                805                 810                 815     


Asp Gly Pro Gly Ser Ala His Leu Gly Arg Thr Ala Leu Leu Leu Lys 
            820                 825                 830         


Leu Gln Gln Lys Tyr Trp Trp Pro Lys Met His Ile Asp Ala Ser Arg 
        835                 840                 845             


Thr Val Leu Asn Cys Thr Val Cys Ala Gln Thr Asn Pro Thr Asn Gln 
    850                 855                 860                 


Lys Pro Arg Pro Pro Leu Val Ile Pro His Asp Thr Lys Pro Phe Gln 
865                 870                 875                 880 


Val Trp Tyr Met Asp Tyr Ile Gly Pro Leu Pro Pro Ser Asn Gly Tyr 
                885                 890                 895     


His His Ala Leu Val Ile Val Asp Ala Gly Thr Gly Phe Thr Trp Ile 
            900                 905                 910         


Tyr Pro Thr Lys Ala Gln Thr Ala Asn Ala Thr Val Lys Ala Leu Thr 
        915                 920                 925             


His Leu Thr Gly Thr Ala Val Pro Lys Val Leu His Ser Asp Gln Gly 
    930                 935                 940                 


Pro Ala Phe Thr Ser Ser Ile Leu Ala Asp Trp Ala Lys Asp Arg Gly 
945                 950                 955                 960 


Ile Gln Leu Glu His Ser Ala Pro Tyr His Pro Gln Ser Ser Gly Lys 
                965                 970                 975     


Val Glu Arg Lys Asn Ser Glu Ile Lys Arg Leu Leu Thr Lys Leu Leu 
            980                 985                 990         


Ala Gly Arg Pro Thr Lys Trp Tyr Pro Leu Ile Pro Ile Val Gln Leu 
        995                 1000                1005            


Ala Leu Asn Asn Thr Pro Asn Thr Arg Gln Lys Tyr Thr Pro His Gln 
    1010                1015                1020                


Leu Met Tyr Gly Val Asp Cys Asn Leu Pro Phe Glu Asn Leu Asp Thr 
1025                1030                1035                1040


Leu Asp Leu Thr Arg Glu Glu Gln Leu Ala Val Leu Lys Glu Val Arg 
                1045                1050                1055    


Asp Gly Leu Leu Asp Ser Tyr Pro Ser Pro Ser Gln Thr Thr Ala Arg 
            1060                1065                1070        


Ser Trp Thr Pro Ser Pro Gly Leu Leu Val Gln Glu Arg Val Ala Arg 
        1075                1080                1085            


Pro Ala Gln Leu Arg Pro Lys Trp Arg Lys Pro Ala Pro Ile Lys Lys 
    1090                1095                1100                


Val Leu Asn Glu Arg Thr Val Ile Ile Asp His Leu Gly Gln Asp Lys 
1105                1110                1115                1120


Val Val Ser Ile Asp Asn Leu Lys Pro Ala Ala His Gln Lys Leu Ala 
                1125                1130                1135    


Gln Thr Pro Asp Ser Ala Glu Ile Cys Pro Ser Ala Thr Pro Cys Pro 
            1140                1145                1150        


Pro Asn Thr Ser Leu Trp Tyr Asp Leu Asp Thr Asp Thr Trp Thr Cys 
        1155                1160                1165            


Gln Arg Cys Gly Tyr Gln Cys Pro Asp Lys Tyr His Gln Pro Gln Cys 
    1170                1175                1180                


Thr Trp Ser Cys Glu Asp Arg Cys Gly His Arg Trp Lys Glu Cys Gly 
1185                1190                1195                1200


Asn Cys Ile Pro Arg Asp Gly Ser Ser Asp Asp Ala Ser Ala Met Ala 
                1205                1210                1215    


Thr Val Glu Val 
            1220


<210>  20

<211>  1149
<212>  PRT
<213>  Feline Foamy virus 

<220>
<223>  Pol (GenBank: CAA11581.1)

<400>  20
Met Asp Pro Leu Gln Leu Leu Gln Pro Leu Glu Ala Glu Ile Lys Gly 
1               5                   10                  15      


Thr Lys Leu Lys Ala His Trp Asp Ser Gly Ala Thr Ile Thr Cys Val 
            20                  25                  30          


Pro Glu Ala Phe Leu Glu Asp Glu Arg Pro Ile Gln Thr Met Leu Ile 
        35                  40                  45              


Lys Thr Ile His Gly Glu Lys Gln Gln Asp Val Tyr Tyr Leu Thr Phe 
    50                  55                  60                  


Lys Val Gln Gly Arg Lys Val Glu Ala Glu Val Leu Ala Ser Pro Tyr 
65                  70                  75                  80  


Asp Tyr Ile Leu Leu Asn Pro Ser Asp Val Pro Trp Leu Met Lys Lys 
                85                  90                  95      


Pro Leu Gln Leu Thr Val Leu Val Pro Leu His Glu Tyr Gln Glu Arg 
            100                 105                 110         


Leu Leu Gln Gln Thr Ala Leu Pro Lys Glu Gln Lys Glu Leu Leu Gln 
        115                 120                 125             


Lys Leu Phe Leu Lys Tyr Asp Ala Leu Trp Gln His Trp Glu Asn Gln 
    130                 135                 140                 


Val Gly His Arg Arg Ile Lys Pro His Asn Ile Ala Thr Gly Thr Leu 
145                 150                 155                 160 


Ala Pro Arg Pro Gln Lys Gln Tyr Pro Ile Asn Pro Lys Ala Lys Pro 
                165                 170                 175     


Ser Ile Gln Ile Val Ile Asp Asp Leu Leu Lys Gln Gly Val Leu Ile 
            180                 185                 190         


Gln Gln Asn Ser Thr Met Asn Thr Pro Val Tyr Pro Val Pro Lys Pro 
        195                 200                 205             


Asp Gly Lys Trp Arg Met Val Leu Asp Tyr Arg Glu Val Asn Lys Thr 
    210                 215                 220                 


Ile Pro Leu Ile Ala Ala Gln Asn Gln His Ser Ala Gly Ile Leu Ser 
225                 230                 235                 240 


Ser Ile Tyr Arg Gly Lys Tyr Lys Thr Thr Leu Asp Leu Thr Asn Gly 
                245                 250                 255     


Phe Trp Ala His Pro Ile Thr Pro Glu Ser Tyr Trp Leu Thr Ala Phe 
            260                 265                 270         


Thr Trp Gln Gly Lys Gln Tyr Cys Trp Thr Arg Leu Pro Gln Gly Phe 
        275                 280                 285             


Leu Asn Ser Pro Ala Leu Phe Thr Ala Asp Val Val Asp Leu Leu Lys 
    290                 295                 300                 


Glu Ile Pro Asn Val Gln Ala Tyr Val Asp Asp Ile Tyr Ile Ser His 
305                 310                 315                 320 


Asp Asp Pro Gln Glu His Leu Glu Gln Leu Glu Lys Ile Phe Ser Ile 
                325                 330                 335     


Leu Leu Asn Ala Gly Tyr Val Val Ser Leu Lys Lys Ser Glu Ile Ala 
            340                 345                 350         


Gln Arg Glu Val Glu Phe Leu Gly Phe Asn Ile Thr Lys Glu Gly Arg 
        355                 360                 365             


Gly Leu Thr Asp Thr Phe Lys Gln Lys Leu Leu Asn Ile Thr Pro Pro 
    370                 375                 380                 


Lys Asp Leu Lys Gln Leu Gln Ser Ile Leu Gly Leu Leu Asn Phe Ala 
385                 390                 395                 400 


Arg Asn Phe Ile Pro Asn Tyr Ser Glu Leu Val Lys Pro Leu Tyr Thr 
                405                 410                 415     


Ile Val Ala Asn Ala Asn Gly Lys Phe Ile Ser Trp Thr Glu Asp Asn 
            420                 425                 430         


Ser Asn Gln Leu Gln His Ile Ile Ser Val Leu Asn Gln Ala Asp Asn 
        435                 440                 445             


Leu Glu Glu Arg Asn Pro Glu Thr Arg Leu Ile Ile Lys Val Asn Ser 
    450                 455                 460                 


Ser Pro Ser Ala Gly Tyr Ile Arg Tyr Tyr Asn Glu Gly Ser Lys Arg 
465                 470                 475                 480 


Pro Ile Met Tyr Val Asn Tyr Ile Phe Ser Lys Ala Glu Ala Lys Phe 
                485                 490                 495     


Thr Gln Thr Glu Lys Leu Leu Thr Thr Met His Lys Gly Leu Ile Lys 
            500                 505                 510         


Ala Met Asp Leu Ala Met Gly Gln Glu Ile Leu Val Tyr Ser Pro Ile 
        515                 520                 525             


Val Ser Met Thr Lys Ile Gln Arg Thr Pro Leu Pro Glu Arg Lys Ala 
    530                 535                 540                 


Leu Pro Val Arg Trp Ile Thr Trp Met Thr Tyr Leu Glu Asp Pro Arg 
545                 550                 555                 560 


Ile Gln Phe His Tyr Asp Lys Ser Leu Pro Glu Leu Gln Gln Ile Pro 
                565                 570                 575     


Asn Val Thr Glu Asp Val Ile Ala Lys Thr Lys His Pro Ser Glu Phe 
            580                 585                 590         


Ala Met Val Phe Tyr Thr Asp Gly Ser Ala Ile Lys His Pro Asp Val 
        595                 600                 605             


Asn Lys Ser His Ser Ala Gly Met Gly Ile Ala Gln Val Gln Phe Ile 
    610                 615                 620                 


Pro Glu Tyr Lys Ile Val His Gln Trp Ser Ile Pro Leu Gly Asp His 
625                 630                 635                 640 


Thr Ala Gln Leu Ala Glu Ile Ala Ala Val Glu Phe Ala Cys Lys Lys 
                645                 650                 655     


Ala Leu Lys Ile Ser Gly Pro Val Leu Ile Val Thr Asp Ser Phe Tyr 
            660                 665                 670         


Val Ala Glu Ser Ala Asn Lys Glu Leu Pro Tyr Trp Lys Ser Asn Gly 
        675                 680                 685             


Phe Leu Asn Asn Lys Lys Lys Pro Leu Arg His Val Ser Lys Trp Lys 
    690                 695                 700                 


Ser Ile Ala Glu Cys Leu Gln Leu Lys Pro Asp Ile Ile Ile Met His 
705                 710                 715                 720 


Glu Lys Gly His Gln Gln Pro Met Thr Thr Leu His Thr Glu Gly Asn 
                725                 730                 735     


Asn Leu Ala Asp Lys Leu Ala Thr Gln Gly Ser Tyr Val Val His Cys 
            740                 745                 750         


Asn Thr Thr Pro Ser Leu Asp Ala Glu Leu Asp Gln Leu Leu Gln Gly 
        755                 760                 765             


His Tyr Pro Pro Gly Tyr Pro Lys Gln Tyr Lys Tyr Thr Leu Glu Glu 
    770                 775                 780                 


Asn Lys Leu Ile Val Glu Arg Pro Asn Gly Ile Arg Ile Val Pro Pro 
785                 790                 795                 800 


Lys Ala Asp Arg Glu Lys Ile Ile Ser Thr Ala His Asn Ile Ala His 
                805                 810                 815     


Thr Gly Arg Asp Ala Thr Phe Leu Lys Val Ser Ser Lys Tyr Trp Trp 
            820                 825                 830         


Pro Asn Leu Arg Lys Asp Val Val Lys Ser Ile Arg Gln Cys Lys Gln 
        835                 840                 845             


Cys Leu Val Thr Asn Ala Thr Asn Leu Thr Ser Pro Pro Ile Leu Arg 
    850                 855                 860                 


Pro Val Lys Pro Leu Lys Pro Phe Asp Lys Phe Tyr Ile Asp Tyr Ile 
865                 870                 875                 880 


Gly Pro Leu Pro Pro Ser Asn Gly Tyr Leu His Val Leu Val Val Val 
                885                 890                 895     


Asp Ser Met Thr Gly Phe Val Trp Leu Tyr Pro Thr Lys Ala Pro Ser 
            900                 905                 910         


Thr Ser Ala Thr Val Lys Ala Leu Asn Met Leu Thr Ser Ile Ala Ile 
        915                 920                 925             


Pro Lys Val Leu His Ser Asp Gln Gly Ala Ala Phe Thr Ser Ser Thr 
    930                 935                 940                 


Phe Ala Asp Trp Ala Lys Glu Lys Gly Ile Gln Leu Glu Phe Ser Thr 
945                 950                 955                 960 


Pro Tyr His Pro Gln Ser Ser Gly Lys Val Glu Arg Lys Asn Ser Asp 
                965                 970                 975     


Ile Lys Arg Leu Leu Thr Lys Leu Leu Ile Gly Arg Pro Ala Lys Trp 
            980                 985                 990         


Tyr Asp Leu Leu Pro Val Val Gln Leu Ala Leu Asn Asn Ser Tyr Ser 
        995                 1000                1005            


Pro Ser Ser Lys Tyr Thr Pro His Gln Leu Leu Phe Gly Val Asp Ser 
    1010                1015                1020                


Asn Thr Pro Phe Ala Asn Ser Asp Thr Leu Asp Leu Ser Arg Glu Glu 
1025                1030                1035                1040


Glu Leu Ser Leu Leu Gln Glu Ile Arg Ser Ser Leu His Gln Pro Thr 
                1045                1050                1055    


Ser Pro Pro Ala Ser Ser Arg Ser Trp Ser Pro Ser Val Gly Gln Leu 
            1060                1065                1070        


Val Gln Glu Arg Val Ala Arg Pro Ala Ser Leu Arg Pro Arg Trp His 
        1075                1080                1085            


Lys Pro Thr Ala Ile Leu Glu Val Val Asn Pro Arg Thr Val Ile Ile 
    1090                1095                1100                


Leu Asp His Leu Gly Asn Arg Arg Thr Val Ser Val Asp Asn Leu Lys 
1105                1110                1115                1120


Leu Thr Ala Tyr Gln Asp Asn Gly Thr Ser Asn Asp Ser Gly Thr Met 
                1125                1130                1135    


Ala Leu Met Glu Glu Asp Glu Ser Ser Thr Ser Ser Thr 
            1140                1145                



<210>  21

<211>  193
<212>  RNA
<213>  Human foamy virus

<220>
<223>  proviral DNA, R region

<400>  21
gagcucuuca cuacucgcug cgucgagagu guacgagacu cuccagguuu gguaagaaau     60
auuuuauauu guuauaaugu uacuaugauc cauuaacacu cugcuuauag auuguaaggg    120
ugauugcaau gcuuucugca uaaaacuuug guuuucuugu uaaucaauaa accgacuuga    180
uucgagaacc uac                                                       193


<210>  22

<211>  153
<212>  RNA
<213>  Human foamy virus

<220>
<223>  proviral DNA, T5 region

<400>  22
ucauauauua uugucucuuu uauacuuuau uaaguaaaag gauuuguaua uuagccuugc     60
uaagggagac aucuagugau auaaguguga acuacacuua ucuuaaauga uguaacuccu    120
uaggauaauc aauauacaaa auuccaugac aau                                 153


<210>  23

<211>  294
<212>  RNA
<213>  Human foamy virus

<220>
<223>  Cas I

<400>  23
uggcgcccaa cguggggcuc gaauauaagu cggguuuauu uguaaauuau cccuagggac     60
cuccgagcau agcgggaggc auauaaaagc caauagacac uggcuuaagg aaguaauguu    120
gaagaauaug aacuugaugu ugaagcucug guuguaauuu uaagagauag aaauauacca    180
agaaauccuu uacauggaga aguuauaggu cuucgccuua cugaaggaug guggggacaa    240
auugagagau uucagauggu acgucuaaua uuacaagaug augauaauga accu          294


<210>  24

<211>  807
<212>  RNA
<213>  Human foamy virus

<220>
<223>  5' CAS II

<400>  24
uuacagagac cuuaauuaag gcuauggauu uggccuuggg acaagaaaua uuaguuuaua     60
gucccauugu aucuaugacu aaaauacaaa aaacuccacu accagaaaga aaagcuuuac    120
ccauuagaug gauaacaugg augacuuauu uagaagaucc aagaauccaa uuucauuaug    180
auaaaaccuu accagaacuu aagcauauuc cagauguaua uacaucuagu cagucuccug    240
uuaaacaucc uucucaauau gaaggagugu uuuauacuga uggcucggcc aucaaaaguc    300
cugauccuac aaaaagcaau aaugcuggca ugggaauagu acaugccaca uacaaaccug    360
aauaucaagu uuugaaucaa uggucaauac cacuagguaa ucauacugcu cagauggcug    420
aaauagcugc aguugaauuu gccuguaaaa aagcuuuaaa aauaccuggu ccuguauuag    480
uuauaacuga uaguuucuau guagcagaaa gugcuaauaa agaauuacca uacuggaaau    540
cuaauggguu uguuaauaau aagaaaaagc cucuuaaaca uaucuccaaa uggaaaucua    600
uugcugagug uuuaucuaug aaaccagaca uuacuauuca acaugaaaaa ggcaucagcc    660
uacaaauacc aguauucaua cugaaaggca augcccuagc agauaagcuu gccacccaag    720
gaaguuaugu gguuaauugu aauaccaaaa aaccaaaccu ggaugcagag uuggaucaau    780
uauuacaggg ucauuauaua aaaggau                                        807


<210>  25

<211>  649
<212>  RNA
<213>  Human foamy virus

<220>
<223>  3' CAS II

<400>  25
uauuggaccu uugccaccuu cacagggaua ccuauaugua uuaguaguug uugauggaau     60
gacaggauuc acuugguuau accccacuaa ggcuccuucu acuagcgcaa cuguuaaauc    120
ucucaaugua cucacuagua uugcaauucc aaaggugauu cacucugauc aaggugcagc    180
auucacuucu ucaaccuuug cugaaugggc aaaggaaaga gguauacauu uggaauucag    240
uacuccuuau cacccccaaa gugguaguaa gguggaaagg aaaaauagug auauaaaacg    300
acuuuuaacu aaacugcuag uaggaagacc cacaaagugg uaugaccuau ugccuguugu    360
acaacuugcu uuaaacaaca ccuauagccc uguauuaaaa uauacuccac aucaacucuu    420
auuugguaua gauucaaaua cuccauuugc aaaucaagau acacuugacu ugaccagaga    480
agaagaacuu ucucuuuuac aggaaauucg uacuucuuua uaccauccau ccaccccucc    540
agccuccucu cguuccuggu cuccuguugu uggccaauug guccaggaga ggguggcuag    600
gccugcuucu uugagaccuc guuggcauaa accgucuacu guacuuaag                649


<210>  26

<211>  9
<212>  RNA
<213>  Human foamy virus

<220>
<223>  cppt

<400>  26
caggagagg                                                              9


<210>  27

<211>  410
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Description of artificial sequence: Synthetic polynucleotide

<220>
<223>  SFFV promoter

<400>  27
cuagcugcag uaacgccauu uugcaaggca uggaaaaaua ccaaaccaag aauagagaag     60
uucagaucaa gggcggguac augaaaauag cuaacguugg gccaaacagg auaucugcgg    120
ugagcaguuu cggccccggc ccggggccaa gaacagaugg ucaccgcagu uucggccccg    180
gcccgaggcc aagaacagau gguccccaga uauggcccaa cccucagcag uuucuuaaga    240
cccaucagau guuuccaggc ucccccaagg accugaaaug acccugcgcc uuauuugaau    300
uaaccaauca gccugcuucu cgcuucuguu cgcgcgcuuc ugcuucccga gcucuauaaa    360
agagcucaca accccucacu cggcgcgcca guccuccgac agacugaguc               410


<210>  28

<211>  219
<212>  RNA
<213>  Artificial sequence

<220>
<223>  Description of artificial sequence: Synthetic polynucleotide


<220>
<223>  proviral DNA, deleted T3 sequence

<400>  28
ugugguggaa ugccacuaga aacuagggaa aacuaggagg agaguauuac agggaaggaa     60
gugaagaacc ucgugaccca aauacuccug cuccucauag acguaccugg gaugagagac    120
acaagguucu uaaauugucc ucauucgcua cucccucuga cauccaacgc ugggcuacua    180
aagcauugcc uuauggcugg aaagugguca cuuguacgg                           219


<210>  29

<211>  24
<212>  RNA
<213>  Human foamy virus

<220>
<223>  3'PPT

<400>  29
agagaggaag uaacgaggag aggg                                            24


<210>  30

<211>  2975
<212>  DNA
<213>  artificial sequence

<220>
<223>  Description of artificial sequence: Synthetic polynucleotide


<220>
<223>  FV_Env_HCO_Seq

<400>  30
ccatggcccc tcccatgacc ctgcagcagt ggatcatctg gaagaagatg aacaaggccc     60
acgaggccct gcagaacacc accaccgtga ccgagcagca gaaagagcag atcatcctgg    120
acatccagaa cgaggaagtg cagcccacca ggcgggacaa gttcagatac ctgctgtaca    180
cctgctgcgc cacctccagc cgggtgctgg cctggatgtt cctggtgtgc atcctgctga    240
tcatcgtgct ggtgtcctgc ttcgtgacca tcagccggat ccagtggaac aaggacatcc    300
aggtgctggg ccccgtgatc gactggaacg tgacccagcg ggccgtgtac cagcccctgc    360
agacccggcg gatcgcccgg tccctgcgga tgcagcaccc cgtgcccaag tacgtggagg    420
tgaacatgac cagcatcccc cagggcgtgt actacgagcc ccaccccgag cccatcgtgg    480
tgaaagaaag agtgctgggc ctgagccaga tcctgatgat caacagcgag aacatcgcca    540
acaacgccaa cctgacccag gaagtgaaga aactgctgac cgagatggtg aacgaagaga    600
tgcagagcct gagcgacgtg atgatcgact tcgagatccc cctgggcgac cccagggacc    660
aggaacagta catccaccgg aagtgctacc aggaatttgc caactgctac ctggtgaagt    720
acaaagagcc caagccctgg cccaaagagg gcctgatcgc cgaccagtgc cccctgcccg    780
gctatcacgc cggcctgacc tacaaccggc agagcatctg ggactactac atcaaggtgg    840
agagcatcag gcccgccaac tggaccacca agagcaagta cggccaggcc cggctgggca    900
gcttctacat ccccagcagc ctgcggcaga tcaacgtgag ccacgtgctg ttctgcagcg    960
accagctgta cagcaagtgg tacaacatcg agaacaccat cgagcagaac gagcggttcc   1020
tgctgaacaa gctgaataac ctgaccagcg gcaccagcgt gctgaagaag agagccctgc   1080
ccaaggactg gtccagccag ggcaagaacg ccctgttccg ggagatcaat gtgctggaca   1140
tctgcagcaa gcccgagagc gtgatcctgc tgaataccag ctactacagc ttcagcctgt   1200
gggagggcga ctgcaacttc accaaggaca tgatcagcca gctggtgccc gagtgcgacg   1260
gcttctacaa caactccaag tggatgcaca tgcaccccta cgcctgccgg ttctggcgga   1320
gcaagaacga gaaagaggaa accaagtgcc gggacggcga gaccaagcgg tgcctgtact   1380
accccctgtg ggacagccct gagagcacct acgacttcgg ctacctggcc taccagaaga   1440
acttccccag ccccatctgc atcgaacagc agaagatccg ggaccaggac tacgaggtgt   1500
acagcctgta ccaggaatgc aagatcgcca gcaaggccta cggcatcgac accgtgctgt   1560
tcagcctgaa gaatttcctg aactacaccg gcacccccgt gaacgagatg cccaacgcca   1620
gggccttcgt gggcctgatt gaccccaagt tcccccccag ctaccccaac gtgacccggg   1680
agcactacac cagctgcaac aaccggaagc ggcggagcgt ggacaacaac tacgccaagc   1740
tgcggagcat gggctacgct ctgacaggcg ccgtgcagac cctgtcccag atcagcgaca   1800
tcaacgacga gaacctgcag cagggcatct acctgctgcg ggaccacgtg atcaccctga   1860
tggaagccac cctgcacgac atcagcgtga tggaaggcat gttcgccgtg cagcacctgc   1920
acacccacct gaatcacctg aaaaccatgc tgctggaacg gcgcatcgac tggacctaca   1980
tgagcagcac ctggctgcag cagcagctgc agaaaagcga cgacgagatg aaggtgatca   2040
agcggatcgc cagatctctg gtgtactacg tgaagcagac ccacagcagc cccaccgcca   2100
ccgcctggga gatcggcctg tactatgagc tggtgatccc caagcacatc tacctgaaca   2160
actggaatgt ggtgaacatc ggccacctgg tgaaaagcgc cggacagctg acccacgtga   2220
ccatcgccca cccctacgag atcatcaaca aagaatgcgt ggagaccatc tatctgcacc   2280
tggaagattg cacccggcag gactacgtga tctgcgacgt ggtgaagatc gtgcagccct   2340
gcggcaacag cagcgacacc agcgactgcc ccgtgtgggc cgaggccgtg aaagaaccct   2400
tcgtgcaggt gaaccccctg aagaacggct cctacctggt gctggccagc agcaccgact   2460
gccagatccc cccctacgtg cccagcatcg tgaccgtgaa tgagaccacc tcctgcttcg   2520
gcctggactt caagcggccc ctggtggccg aggaaagact gagcttcgag ccccggctgc   2580
ccaacctgca gctgaggctg ccccacctgg tgggcatcat cgccaagatc aagggcatca   2640
agatcgaggt gaccagcagc ggcgagagca tcaaagaaca gatcgagcgg gccaaggccg   2700
agctgctgcg gctggatatc cacgagggcg acacacccgc ctggatccag cagctggccg   2760
ccgccaccaa ggacgtgtgg cccgctgcag ccagcgccct gcagggcatc ggcaactttc   2820
tgagcggcac cgcccagggc atcttcggca ccgccttctc cctgctgggc tacctgaagc   2880
ccatcctgat cggcgtgggc gtgattctgc tggtgattct gatcttcaag atcgtgagct   2940
ggatccccac caagaaaaag aaccagtgac tcgag                              2975


<210>  31

<211>  2967
<212>  RNA
<213>  artificial sequence

<220>
<223>  Description of artificial sequence: Synthetic polynucleotide

<220>
<223>  FV_Env_HCO_Seq

<400>  31
auggccccuc ccaugacccu gcagcagugg aucaucugga agaagaugaa caaggcccac     60
gaggcccugc agaacaccac caccgugacc gagcagcaga aagagcagau cauccuggac    120
auccagaacg aggaagugca gcccaccagg cgggacaagu ucagauaccu gcuguacacc    180
ugcugcgcca ccuccagccg ggugcuggcc uggauguucc uggugugcau ccugcugauc    240
aucgugcugg uguccugcuu cgugaccauc agccggaucc aguggaacaa ggacauccag    300
gugcugggcc ccgugaucga cuggaacgug acccagcggg ccguguacca gccccugcag    360
acccggcgga ucgcccgguc ccugcggaug cagcaccccg ugcccaagua cguggaggug    420
aacaugacca gcauccccca gggcguguac uacgagcccc accccgagcc caucguggug    480
aaagaaagag ugcugggccu gagccagauc cugaugauca acagcgagaa caucgccaac    540
aacgccaacc ugacccagga agugaagaaa cugcugaccg agauggugaa cgaagagaug    600
cagagccuga gcgacgugau gaucgacuuc gagauccccc ugggcgaccc cagggaccag    660
gaacaguaca uccaccggaa gugcuaccag gaauuugcca acugcuaccu ggugaaguac    720
aaagagccca agcccuggcc caaagagggc cugaucgccg accagugccc ccugcccggc    780
uaucacgccg gccugaccua caaccggcag agcaucuggg acuacuacau caagguggag    840
agcaucaggc ccgccaacug gaccaccaag agcaaguacg gccaggcccg gcugggcagc    900
uucuacaucc ccagcagccu gcggcagauc aacgugagcc acgugcuguu cugcagcgac    960
cagcuguaca gcaaguggua caacaucgag aacaccaucg agcagaacga gcgguuccug   1020
cugaacaagc ugaauaaccu gaccagcggc accagcgugc ugaagaagag agcccugccc   1080
aaggacuggu ccagccaggg caagaacgcc cuguuccggg agaucaaugu gcuggacauc   1140
ugcagcaagc ccgagagcgu gauccugcug aauaccagcu acuacagcuu cagccugugg   1200
gagggcgacu gcaacuucac caaggacaug aucagccagc uggugcccga gugcgacggc   1260
uucuacaaca acuccaagug gaugcacaug caccccuacg ccugccgguu cuggcggagc   1320
aagaacgaga aagaggaaac caagugccgg gacggcgaga ccaagcggug ccuguacuac   1380
ccccuguggg acagcccuga gagcaccuac gacuucggcu accuggccua ccagaagaac   1440
uuccccagcc ccaucugcau cgaacagcag aagauccggg accaggacua cgagguguac   1500
agccuguacc aggaaugcaa gaucgccagc aaggccuacg gcaucgacac cgugcuguuc   1560
agccugaaga auuuccugaa cuacaccggc acccccguga acgagaugcc caacgccagg   1620
gccuucgugg gccugauuga ccccaaguuc ccccccagcu accccaacgu gacccgggag   1680
cacuacacca gcugcaacaa ccggaagcgg cggagcgugg acaacaacua cgccaagcug   1740
cggagcaugg gcuacgcucu gacaggcgcc gugcagaccc ugucccagau cagcgacauc   1800
aacgacgaga accugcagca gggcaucuac cugcugcggg accacgugau cacccugaug   1860
gaagccaccc ugcacgacau cagcgugaug gaaggcaugu ucgccgugca gcaccugcac   1920
acccaccuga aucaccugaa aaccaugcug cuggaacggc gcaucgacug gaccuacaug   1980
agcagcaccu ggcugcagca gcagcugcag aaaagcgacg acgagaugaa ggugaucaag   2040
cggaucgcca gaucucuggu guacuacgug aagcagaccc acagcagccc caccgccacc   2100
gccugggaga ucggccugua cuaugagcug gugaucccca agcacaucua ccugaacaac   2160
uggaaugugg ugaacaucgg ccaccuggug aaaagcgccg gacagcugac ccacgugacc   2220
aucgcccacc ccuacgagau caucaacaaa gaaugcgugg agaccaucua ucugcaccug   2280
gaagauugca cccggcagga cuacgugauc ugcgacgugg ugaagaucgu gcagcccugc   2340
ggcaacagca gcgacaccag cgacugcccc gugugggccg aggccgugaa agaacccuuc   2400
gugcagguga acccccugaa gaacggcucc uaccuggugc uggccagcag caccgacugc   2460
cagauccccc ccuacgugcc cagcaucgug accgugaaug agaccaccuc cugcuucggc   2520
cuggacuuca agcggccccu gguggccgag gaaagacuga gcuucgagcc ccggcugccc   2580
aaccugcagc ugaggcugcc ccaccuggug ggcaucaucg ccaagaucaa gggcaucaag   2640
aucgagguga ccagcagcgg cgagagcauc aaagaacaga ucgagcgggc caaggccgag   2700
cugcugcggc uggauaucca cgagggcgac acacccgccu ggauccagca gcuggccgcc   2760
gccaccaagg acguguggcc cgcugcagcc agcgcccugc agggcaucgg caacuuucug   2820
agcggcaccg cccagggcau cuucggcacc gccuucuccc ugcugggcua ccugaagccc   2880
auccugaucg gcgugggcgu gauucugcug gugauucuga ucuucaagau cgugagcugg   2940
auccccacca agaaaaagaa ccaguga                                       2967


<210>  32

<211>  988
<212>  PRT
<213>  artificial sequence

<220>
<223>  Description of artificial sequence: Synthetic polypeptide

<220>
<223>  FV_Env_HCO_Seq

<400>  32
Met Ala Pro Pro Met Thr Leu Gln Gln Trp Ile Ile Trp Lys Lys Met 
1               5                   10                  15      


Asn Lys Ala His Glu Ala Leu Gln Asn Thr Thr Thr Val Thr Glu Gln 
            20                  25                  30          


Gln Lys Glu Gln Ile Ile Leu Asp Ile Gln Asn Glu Glu Val Gln Pro 
        35                  40                  45              


Thr Arg Arg Asp Lys Phe Arg Tyr Leu Leu Tyr Thr Cys Cys Ala Thr 
    50                  55                  60                  


Ser Ser Arg Val Leu Ala Trp Met Phe Leu Val Cys Ile Leu Leu Ile 
65                  70                  75                  80  


Ile Val Leu Val Ser Cys Phe Val Thr Ile Ser Arg Ile Gln Trp Asn 
                85                  90                  95      


Lys Asp Ile Gln Val Leu Gly Pro Val Ile Asp Trp Asn Val Thr Gln 
            100                 105                 110         


Arg Ala Val Tyr Gln Pro Leu Gln Thr Arg Arg Ile Ala Arg Ser Leu 
        115                 120                 125             


Arg Met Gln His Pro Val Pro Lys Tyr Val Glu Val Asn Met Thr Ser 
    130                 135                 140                 


Ile Pro Gln Gly Val Tyr Tyr Glu Pro His Pro Glu Pro Ile Val Val 
145                 150                 155                 160 


Lys Glu Arg Val Leu Gly Leu Ser Gln Ile Leu Met Ile Asn Ser Glu 
                165                 170                 175     


Asn Ile Ala Asn Asn Ala Asn Leu Thr Gln Glu Val Lys Lys Leu Leu 
            180                 185                 190         


Thr Glu Met Val Asn Glu Glu Met Gln Ser Leu Ser Asp Val Met Ile 
        195                 200                 205             


Asp Phe Glu Ile Pro Leu Gly Asp Pro Arg Asp Gln Glu Gln Tyr Ile 
    210                 215                 220                 


His Arg Lys Cys Tyr Gln Glu Phe Ala Asn Cys Tyr Leu Val Lys Tyr 
225                 230                 235                 240 


Lys Glu Pro Lys Pro Trp Pro Lys Glu Gly Leu Ile Ala Asp Gln Cys 
                245                 250                 255     


Pro Leu Pro Gly Tyr His Ala Gly Leu Thr Tyr Asn Arg Gln Ser Ile 
            260                 265                 270         


Trp Asp Tyr Tyr Ile Lys Val Glu Ser Ile Arg Pro Ala Asn Trp Thr 
        275                 280                 285             


Thr Lys Ser Lys Tyr Gly Gln Ala Arg Leu Gly Ser Phe Tyr Ile Pro 
    290                 295                 300                 


Ser Ser Leu Arg Gln Ile Asn Val Ser His Val Leu Phe Cys Ser Asp 
305                 310                 315                 320 


Gln Leu Tyr Ser Lys Trp Tyr Asn Ile Glu Asn Thr Ile Glu Gln Asn 
                325                 330                 335     


Glu Arg Phe Leu Leu Asn Lys Leu Asn Asn Leu Thr Ser Gly Thr Ser 
            340                 345                 350         


Val Leu Lys Lys Arg Ala Leu Pro Lys Asp Trp Ser Ser Gln Gly Lys 
        355                 360                 365             


Asn Ala Leu Phe Arg Glu Ile Asn Val Leu Asp Ile Cys Ser Lys Pro 
    370                 375                 380                 


Glu Ser Val Ile Leu Leu Asn Thr Ser Tyr Tyr Ser Phe Ser Leu Trp 
385                 390                 395                 400 


Glu Gly Asp Cys Asn Phe Thr Lys Asp Met Ile Ser Gln Leu Val Pro 
                405                 410                 415     


Glu Cys Asp Gly Phe Tyr Asn Asn Ser Lys Trp Met His Met His Pro 
            420                 425                 430         


Tyr Ala Cys Arg Phe Trp Arg Ser Lys Asn Glu Lys Glu Glu Thr Lys 
        435                 440                 445             


Cys Arg Asp Gly Glu Thr Lys Arg Cys Leu Tyr Tyr Pro Leu Trp Asp 
    450                 455                 460                 


Ser Pro Glu Ser Thr Tyr Asp Phe Gly Tyr Leu Ala Tyr Gln Lys Asn 
465                 470                 475                 480 


Phe Pro Ser Pro Ile Cys Ile Glu Gln Gln Lys Ile Arg Asp Gln Asp 
                485                 490                 495     


Tyr Glu Val Tyr Ser Leu Tyr Gln Glu Cys Lys Ile Ala Ser Lys Ala 
            500                 505                 510         


Tyr Gly Ile Asp Thr Val Leu Phe Ser Leu Lys Asn Phe Leu Asn Tyr 
        515                 520                 525             


Thr Gly Thr Pro Val Asn Glu Met Pro Asn Ala Arg Ala Phe Val Gly 
    530                 535                 540                 


Leu Ile Asp Pro Lys Phe Pro Pro Ser Tyr Pro Asn Val Thr Arg Glu 
545                 550                 555                 560 


His Tyr Thr Ser Cys Asn Asn Arg Lys Arg Arg Ser Val Asp Asn Asn 
                565                 570                 575     


Tyr Ala Lys Leu Arg Ser Met Gly Tyr Ala Leu Thr Gly Ala Val Gln 
            580                 585                 590         


Thr Leu Ser Gln Ile Ser Asp Ile Asn Asp Glu Asn Leu Gln Gln Gly 
        595                 600                 605             


Ile Tyr Leu Leu Arg Asp His Val Ile Thr Leu Met Glu Ala Thr Leu 
    610                 615                 620                 


His Asp Ile Ser Val Met Glu Gly Met Phe Ala Val Gln His Leu His 
625                 630                 635                 640 


Thr His Leu Asn His Leu Lys Thr Met Leu Leu Glu Arg Arg Ile Asp 
                645                 650                 655     


Trp Thr Tyr Met Ser Ser Thr Trp Leu Gln Gln Gln Leu Gln Lys Ser 
            660                 665                 670         


Asp Asp Glu Met Lys Val Ile Lys Arg Ile Ala Arg Ser Leu Val Tyr 
        675                 680                 685             


Tyr Val Lys Gln Thr His Ser Ser Pro Thr Ala Thr Ala Trp Glu Ile 
    690                 695                 700                 


Gly Leu Tyr Tyr Glu Leu Val Ile Pro Lys His Ile Tyr Leu Asn Asn 
705                 710                 715                 720 


Trp Asn Val Val Asn Ile Gly His Leu Val Lys Ser Ala Gly Gln Leu 
                725                 730                 735     


Thr His Val Thr Ile Ala His Pro Tyr Glu Ile Ile Asn Lys Glu Cys 
            740                 745                 750         


Val Glu Thr Ile Tyr Leu His Leu Glu Asp Cys Thr Arg Gln Asp Tyr 
        755                 760                 765             


Val Ile Cys Asp Val Val Lys Ile Val Gln Pro Cys Gly Asn Ser Ser 
    770                 775                 780                 


Asp Thr Ser Asp Cys Pro Val Trp Ala Glu Ala Val Lys Glu Pro Phe 
785                 790                 795                 800 


Val Gln Val Asn Pro Leu Lys Asn Gly Ser Tyr Leu Val Leu Ala Ser 
                805                 810                 815     


Ser Thr Asp Cys Gln Ile Pro Pro Tyr Val Pro Ser Ile Val Thr Val 
            820                 825                 830         


Asn Glu Thr Thr Ser Cys Phe Gly Leu Asp Phe Lys Arg Pro Leu Val 
        835                 840                 845             


Ala Glu Glu Arg Leu Ser Phe Glu Pro Arg Leu Pro Asn Leu Gln Leu 
    850                 855                 860                 


Arg Leu Pro His Leu Val Gly Ile Ile Ala Lys Ile Lys Gly Ile Lys 
865                 870                 875                 880 


Ile Glu Val Thr Ser Ser Gly Glu Ser Ile Lys Glu Gln Ile Glu Arg 
                885                 890                 895     


Ala Lys Ala Glu Leu Leu Arg Leu Asp Ile His Glu Gly Asp Thr Pro 
            900                 905                 910         


Ala Trp Ile Gln Gln Leu Ala Ala Ala Thr Lys Asp Val Trp Pro Ala 
        915                 920                 925             


Ala Ala Ser Ala Leu Gln Gly Ile Gly Asn Phe Leu Ser Gly Thr Ala 
    930                 935                 940                 


Gln Gly Ile Phe Gly Thr Ala Phe Ser Leu Leu Gly Tyr Leu Lys Pro 
945                 950                 955                 960 


Ile Leu Ile Gly Val Gly Val Ile Leu Leu Val Ile Leu Ile Phe Lys 
                965                 970                 975     


Ile Val Ser Trp Ile Pro Thr Lys Lys Lys Asn Gln 
            980                 985             


<210>  33

<211>  988
<212>  PRT
<213>  Human foamy virus

<220>
<223>  Env (GenBank: CAA69000.1)

<400>  33
Met Ala Pro Pro Met Thr Leu Gln Gln Trp Ile Ile Trp Lys Lys Met 
1               5                   10                  15      


Asn Lys Ala His Glu Ala Leu Gln Asn Thr Thr Thr Val Thr Glu Gln 
            20                  25                  30          


Gln Lys Glu Gln Ile Ile Leu Asp Ile Gln Asn Glu Glu Val Gln Pro 
        35                  40                  45              


Thr Arg Arg Asp Lys Phe Arg Tyr Leu Leu Tyr Thr Cys Cys Ala Thr 
    50                  55                  60                  


Ser Ser Arg Val Leu Ala Trp Met Phe Leu Val Cys Ile Leu Leu Ile 
65                  70                  75                  80  


Ile Val Leu Val Ser Cys Phe Val Thr Ile Ser Arg Ile Gln Trp Asn 
                85                  90                  95      


Lys Asp Ile Gln Val Leu Gly Pro Val Ile Asp Trp Asn Val Thr Gln 
            100                 105                 110         


Arg Ala Val Tyr Gln Pro Leu Gln Thr Arg Arg Ile Ala Arg Ser Leu 
        115                 120                 125             


Arg Met Gln His Pro Val Pro Lys Tyr Val Glu Val Asn Met Thr Ser 
    130                 135                 140                 


Ile Pro Gln Gly Val Tyr Tyr Glu Pro His Pro Glu Pro Ile Val Val 
145                 150                 155                 160 


Lys Glu Arg Val Leu Gly Leu Ser Gln Ile Leu Met Ile Asn Ser Glu 
                165                 170                 175     


Asn Ile Ala Asn Asn Ala Asn Leu Thr Gln Glu Val Lys Lys Leu Leu 
            180                 185                 190         


Thr Glu Met Val Asn Glu Glu Met Gln Ser Leu Ser Asp Val Met Ile 
        195                 200                 205             


Asp Phe Glu Ile Pro Leu Gly Asp Pro Arg Asp Gln Glu Gln Tyr Ile 
    210                 215                 220                 


His Arg Lys Cys Tyr Gln Glu Phe Ala Asn Cys Tyr Leu Val Lys Tyr 
225                 230                 235                 240 


Lys Glu Pro Lys Pro Trp Pro Lys Glu Gly Leu Ile Ala Asp Gln Cys 
                245                 250                 255     


Pro Leu Pro Gly Tyr His Ala Gly Leu Thr Tyr Asn Arg Gln Ser Ile 
            260                 265                 270         


Trp Asp Tyr Tyr Ile Lys Val Glu Ser Ile Arg Pro Ala Asn Trp Thr 
        275                 280                 285             


Thr Lys Ser Lys Tyr Gly Gln Ala Arg Leu Gly Ser Phe Tyr Ile Pro 
    290                 295                 300                 


Ser Ser Leu Arg Gln Ile Asn Val Ser His Val Leu Phe Cys Ser Asp 
305                 310                 315                 320 


Gln Leu Tyr Ser Lys Trp Tyr Asn Ile Glu Asn Thr Ile Glu Gln Asn 
                325                 330                 335     


Glu Arg Phe Leu Leu Asn Lys Leu Asn Asn Leu Thr Ser Gly Thr Ser 
            340                 345                 350         


Val Leu Lys Lys Arg Ala Leu Pro Lys Asp Trp Ser Ser Gln Gly Lys 
        355                 360                 365             


Asn Ala Leu Phe Arg Glu Ile Asn Val Leu Asp Ile Cys Ser Lys Pro 
    370                 375                 380                 


Glu Ser Val Ile Leu Leu Asn Thr Ser Tyr Tyr Ser Phe Ser Leu Trp 
385                 390                 395                 400 


Glu Gly Asp Cys Asn Phe Thr Lys Asp Met Ile Ser Gln Leu Val Pro 
                405                 410                 415     


Glu Cys Asp Gly Phe Tyr Asn Asn Ser Lys Trp Met His Met His Pro 
            420                 425                 430         


Tyr Ala Cys Arg Phe Trp Arg Ser Lys Asn Glu Lys Glu Glu Thr Lys 
        435                 440                 445             


Cys Arg Asp Gly Glu Thr Lys Arg Cys Leu Tyr Tyr Pro Leu Trp Asp 
    450                 455                 460                 


Ser Pro Glu Ser Thr Tyr Asp Phe Gly Tyr Leu Ala Tyr Gln Lys Asn 
465                 470                 475                 480 


Phe Pro Ser Pro Ile Cys Ile Glu Gln Gln Lys Ile Arg Asp Gln Asp 
                485                 490                 495     


Tyr Glu Val Tyr Ser Leu Tyr Gln Glu Arg Lys Ile Ala Ser Lys Ala 
            500                 505                 510         


Tyr Gly Ile Asp Thr Val Leu Phe Ser Leu Lys Asn Phe Leu Asn Tyr 
        515                 520                 525             


Thr Gly Thr Pro Val Asn Glu Met Pro Asn Ala Arg Ala Phe Val Gly 
    530                 535                 540                 


Leu Ile Asp Pro Lys Phe Pro Pro Ser Tyr Pro Asn Val Thr Arg Glu 
545                 550                 555                 560 


His Tyr Thr Ser Cys Asn Asn Arg Lys Arg Arg Ser Val Asp Asn Asn 
                565                 570                 575     


Tyr Ala Lys Leu Arg Ser Met Gly Tyr Ala Leu Thr Gly Ala Val Gln 
            580                 585                 590         


Thr Leu Ser Gln Ile Ser Asp Ile Asn Asp Glu Asn Leu Gln Gln Gly 
        595                 600                 605             


Ile Tyr Leu Leu Arg Asp His Val Ile Thr Leu Met Glu Ala Thr Leu 
    610                 615                 620                 


His Asp Ile Ser Val Met Glu Gly Met Phe Ala Val Gln His Leu His 
625                 630                 635                 640 


Thr His Leu Asn His Leu Lys Thr Met Leu Leu Glu Arg Arg Ile Asp 
                645                 650                 655     


Trp Thr Tyr Met Ser Ser Thr Trp Leu Gln Gln Gln Leu Gln Lys Ser 
            660                 665                 670         


Asp Asp Glu Met Lys Val Ile Lys Arg Ile Ala Arg Ser Leu Val Tyr 
        675                 680                 685             


Tyr Val Lys Gln Thr His Ser Ser Pro Thr Ala Thr Ala Trp Glu Ile 
    690                 695                 700                 


Gly Leu Tyr Tyr Glu Leu Val Ile Pro Lys His Ile Tyr Leu Asn Asn 
705                 710                 715                 720 


Trp Asn Val Val Asn Ile Gly His Leu Val Lys Ser Ala Gly Gln Leu 
                725                 730                 735     


Thr His Val Thr Ile Ala His Pro Tyr Glu Ile Ile Asn Lys Glu Cys 
            740                 745                 750         


Val Glu Thr Ile Tyr Leu His Leu Glu Asp Cys Thr Arg Gln Asp Tyr 
        755                 760                 765             


Val Ile Cys Asp Val Val Lys Ile Val Gln Pro Cys Gly Asn Ser Ser 
    770                 775                 780                 


Asp Thr Ser Asp Cys Pro Val Trp Ala Glu Ala Val Lys Glu Pro Phe 
785                 790                 795                 800 


Val Gln Val Asn Pro Leu Lys Asn Gly Ser Tyr Leu Val Leu Ala Ser 
                805                 810                 815     


Ser Thr Asp Cys Gln Ile Pro Pro Tyr Val Pro Ser Ile Val Thr Val 
            820                 825                 830         


Asn Glu Thr Thr Ser Cys Phe Gly Leu Asp Phe Lys Arg Pro Leu Val 
        835                 840                 845             


Ala Glu Glu Arg Leu Ser Phe Glu Pro Arg Leu Pro Asn Leu Gln Leu 
    850                 855                 860                 


Arg Leu Pro His Leu Val Gly Ile Ile Ala Lys Ile Lys Gly Ile Lys 
865                 870                 875                 880 


Ile Glu Val Thr Ser Ser Gly Glu Ser Ile Lys Glu Gln Ile Glu Arg 
                885                 890                 895     


Ala Lys Ala Glu Leu Leu Arg Leu Asp Ile His Glu Gly Asp Thr Pro 
            900                 905                 910         


Ala Trp Ile Gln Gln Leu Ala Ala Ala Thr Lys Asp Val Trp Pro Ala 
        915                 920                 925             


Ala Ala Ser Ala Leu Gln Gly Ile Gly Asn Phe Leu Ser Gly Thr Ala 
    930                 935                 940                 


Gln Gly Ile Phe Gly Thr Ala Phe Ser Leu Leu Gly Tyr Leu Lys Pro 
945                 950                 955                 960 


Ile Leu Ile Gly Val Gly Val Ile Leu Leu Val Ile Leu Ile Phe Lys 
                965                 970                 975     


Ile Val Ser Trp Ile Pro Thr Lys Lys Lys Asn Gln 
            980                 985             


<210>  34

<211>  989
<212>  PRT
<213>  Macaque simian foamy virus 

<220>
<223>  Env(NCBI Reference: YP_001961123.1)

<400>  34
Met Ala Pro Pro Met Thr Leu Glu Gln Trp Leu Leu Trp Lys Lys Met 
1               5                   10                  15      


Ser Gln Ala His Gln Ala Leu Glu Asn Val Thr Thr Leu Thr Glu Glu 
            20                  25                  30          


Gln Lys Gln Gln Val Ile Ile Asp Ile Gln His Glu Asp Val Val Pro 
        35                  40                  45              


Thr Arg Met Asp Lys Leu Lys Tyr Leu Ala Tyr Ser Cys Cys Ala Thr 
    50                  55                  60                  


Ser Thr Arg Val Leu Cys Trp Ile Val Leu Val Cys Val Leu Leu Leu 
65                  70                  75                  80  


Val Val Phe Ile Ser Cys Phe Val Thr Met Ser Arg Ile Gln Trp Asn 
                85                  90                  95      


Lys Asp Ile Ala Val Phe Gly Pro Val Ile Asp Trp Asn Val Ser Gln 
            100                 105                 110         


Gln Ala Val Ile Gln Gln Ile Arg Ala Lys Arg Leu Ala Arg Ser Ile 
        115                 120                 125             


Arg Val Glu His Ala Thr Glu Thr Tyr Val Glu Val Asn Met Thr Ser 
    130                 135                 140                 


Ile Pro Gln Gly Val Leu Tyr Val Pro His Pro Glu Pro Ile Ile Leu 
145                 150                 155                 160 


Lys Glu Arg Ile Leu Gly Leu Ser Gln Val Met Met Ile Asn Ser Glu 
                165                 170                 175     


Asn Ile Ala Asn Thr Ala Asn Leu Thr Gln Glu Thr Lys Val Leu Leu 
            180                 185                 190         


Ala Asp Met Ile Asn Glu Glu Met Asn Asp Leu Ala Asn Gln Met Ile 
        195                 200                 205             


Asp Phe Glu Ile Pro Leu Gly Asp Pro Arg Asp Gln Lys Gln Tyr Gln 
    210                 215                 220                 


His Gln Lys Cys Phe Gln Glu Phe Ala His Cys Tyr Leu Val Lys Tyr 
225                 230                 235                 240 


Lys Thr Thr Lys Gly Trp Pro Ser Ser Thr Val Ile Ala Asp Gln Cys 
                245                 250                 255     


Pro Leu Pro Gly Asn His Pro Thr Val Gln Tyr Ala His Gln Asn Ile 
            260                 265                 270         


Trp Asp Tyr Tyr Val Pro Phe Glu Gln Ile Arg Pro Glu Gly Trp Asn 
        275                 280                 285             


Ser Lys Ser Tyr Tyr Glu Asp Ala Arg Ile Gly Gly Phe Tyr Ile Pro 
    290                 295                 300                 


Lys Trp Leu Arg Asn Asn Ser Tyr Thr His Val Leu Phe Cys Ser Asp 
305                 310                 315                 320 


Gln Ile Tyr Gly Lys Trp Tyr Asn Ile Asp Leu Thr Ala Gln Glu Arg 
                325                 330                 335     


Glu Asn Leu Leu Val Arg Lys Leu Ile Asn Leu Ala Lys Gly Asn Ser 
            340                 345                 350         


Ser Gln Leu Lys Asp Arg Ala Met Pro Ala Glu Trp Asp Lys Gln Gly 
        355                 360                 365             


Lys Ala Asp Leu Phe Arg Gln Ile Asn Thr Leu Asp Val Cys Asn Arg 
    370                 375                 380                 


Pro Glu Met Val Phe Leu Leu Asn Ser Ser Tyr Tyr Glu Phe Ser Leu 
385                 390                 395                 400 


Trp Glu Gly Asp Cys Gly Phe Thr Arg Gln Asn Val Thr Gln Ala Asn 
                405                 410                 415     


Ser Leu Cys Lys Asp Phe Tyr Asn Asn Ser Lys Trp Gln Lys Leu His 
            420                 425                 430         


Pro Tyr Ser Cys Arg Phe Trp Arg Tyr Lys Gln Glu Lys Glu Glu Thr 
        435                 440                 445             


Lys Cys Ser Asn Gly Glu Lys Lys Lys Cys Leu Tyr Tyr Pro Gln Trp 
    450                 455                 460                 


Asp Thr Pro Glu Ala Leu Tyr Asp Phe Gly Phe Leu Ala Tyr Leu Asn 
465                 470                 475                 480 


Ser Phe Pro Ser Pro Ile Cys Ile Lys Asn Gln Thr Ile Arg Glu Pro 
                485                 490                 495     


Glu Tyr Lys Ile Ser Ser Leu Tyr Leu Glu Cys Met Asn Ala Ser Asp 
            500                 505                 510         


Arg His Gly Ile Asp Ser Ala Leu Leu Ala Leu Lys Thr Phe Leu Asn 
        515                 520                 525             


Phe Thr Gly Gln Ser Val Asn Glu Met Pro Leu Ala Arg Ala Phe Val 
    530                 535                 540                 


Gly Leu Thr Asp Pro Lys Phe Pro Pro Thr Tyr Pro Asn Ile Thr Arg 
545                 550                 555                 560 


Glu Ser Ser Gly Cys Asn Asn Asn Lys Arg Lys Arg Arg Ser Val Asn 
                565                 570                 575     


Asn Tyr Glu Arg Leu Arg Ser Met Gly Tyr Ala Leu Thr Gly Ala Val 
            580                 585                 590         


Gln Thr Leu Ser Gln Ile Ser Asp Ile Asn Asp Glu Arg Leu Gln His 
        595                 600                 605             


Gly Val Tyr Leu Leu Arg Asp His Val Val Thr Leu Met Glu Ala Ala 
    610                 615                 620                 


Leu His Asp Val Ser Ile Met Glu Gly Met Leu Ala Ile Gln His Val 
625                 630                 635                 640 


His Thr His Leu Asn His Leu Lys Thr Met Leu Leu Met Arg Lys Ile 
                645                 650                 655     


Asp Trp Thr Phe Ile Arg Ser Asp Trp Ile Gln Gln Gln Leu Gln Lys 
            660                 665                 670         


Thr Asp Asp Glu Met Lys Leu Ile Arg Arg Thr Ala Arg Ser Leu Val 
        675                 680                 685             


Tyr Tyr Val Thr Gln Thr Ser Ser Ser Pro Thr Ala Thr Ser Trp Glu 
    690                 695                 700                 


Ile Gly Ile Tyr Tyr Glu Ile Val Ile Pro Lys His Ile Tyr Leu Asn 
705                 710                 715                 720 


Asn Trp Gln Val Ile Asn Val Gly His Leu Leu Glu Ser Ala Gly His 
                725                 730                 735     


Leu Thr His Val Lys Val Lys His Pro Tyr Glu Ile Ile Asn Lys Glu 
            740                 745                 750         


Cys Ser Asp Thr Gln Tyr Leu His Leu Glu Glu Cys Ile Arg Glu Asp 
        755                 760                 765             


Tyr Val Ile Cys Asp Ile Val Gln Ile Val Gln Pro Cys Gly Asn Ala 
    770                 775                 780                 


Thr Glu Leu Ser Asp Cys Pro Val Thr Ala Leu Lys Val Lys Thr Pro 
785                 790                 795                 800 


Tyr Ile Gln Val Ser Pro Leu Lys Asn Gly Ser Tyr Leu Val Leu Ser 
                805                 810                 815     


Ser Thr Lys Asp Cys Ser Ile Pro Ala Tyr Val Pro Ser Val Val Thr 
            820                 825                 830         


Val Asn Glu Thr Val Lys Cys Phe Gly Val Glu Phe His Lys Pro Leu 
        835                 840                 845             


Tyr Ala Glu Thr Lys Thr Ser Tyr Glu Pro Gln Val Pro His Leu Lys 
    850                 855                 860                 


Leu Arg Leu Pro His Leu Thr Gly Ile Ile Ala Ser Leu Gln Ser Leu 
865                 870                 875                 880 


Glu Ile Glu Val Thr Ser Thr Gln Glu Asn Ile Lys Asp Gln Ile Glu 
                885                 890                 895     


Arg Ala Lys Ala Gln Leu Leu Arg Leu Asp Ile His Glu Gly Asp Phe 
            900                 905                 910         


Pro Asp Trp Leu Lys Gln Val Ala Ser Ala Thr Arg Asp Val Trp Pro 
        915                 920                 925             


Ala Ala Ala Ser Phe Ile Gln Gly Val Gly Asn Phe Leu Ser Asn Thr 
    930                 935                 940                 


Ala Gln Gly Ile Phe Gly Ser Ala Val Ser Leu Leu Phe Tyr Ala Lys 
945                 950                 955                 960 


Pro Ile Leu Ile Gly Ile Gly Val Ile Leu Leu Ile Ala Leu Leu Phe 
                965                 970                 975     


Lys Ile Ile Ser Trp Leu Pro Gly Lys Pro Lys Lys Asn 
            980                 985                 


<210>  35

<211>  982
<212>  PRT
<213>  African green monkey simian foamy virus

<220>
<223>  Env (NCBI Reference: YP_001956723.2)

<400>  35
Met Ala Pro Pro Met Asn Leu Gln Gln Trp Leu Leu Trp Lys Lys Met 
1               5                   10                  15      


Asn Glu Thr His Leu Ala Leu Glu Asn Ile Ser Ser Leu Thr Glu Glu 
            20                  25                  30          


Gln Lys Gln Gln Val Ile Ile Glu Ile Gln Gln Glu Glu Val Ile Pro 
        35                  40                  45              


Thr Arg Met Asp Arg Val Lys Tyr Leu Ala Tyr Ala Cys Cys Ala Thr 
    50                  55                  60                  


Ser Thr Arg Val Met Cys Trp Leu Phe Leu Ile Cys Val Leu Leu Ile 
65                  70                  75                  80  


Ile Val Phe Val Ser Cys Phe Val Thr Val Ala Arg Ile Gln Trp Asn 
                85                  90                  95      


Arg Asp Ile Asn Val Phe Gly Pro Val Ile Asp Trp Asn Val Thr His 
            100                 105                 110         


Gln Ala Thr Tyr Gln Gln Leu Lys Ala Ala Arg Leu Thr Arg Ser Leu 
        115                 120                 125             


Lys Val Glu His Pro His Ile Ser Tyr Ile Ser Ile Asn Met Ser Ser 
    130                 135                 140                 


Ile Pro Gln Gly Val Met Tyr Thr Pro His Pro Glu Pro Ile Ile Leu 
145                 150                 155                 160 


Lys Glu Arg Val Leu Gly Ile Ser Gln Val Leu Met Ile Asn Ser Glu 
                165                 170                 175     


Asn Ile Ala Asn Val Ala Asn Leu Ser Gln Glu Thr Lys Val Leu Leu 
            180                 185                 190         


Thr Asp Met Ile Asn Glu Glu Leu Gln Asp Leu Ser Asn Gln Met Ile 
        195                 200                 205             


Asp Phe Glu Leu Pro Leu Gly Asp Pro Arg Asp Gln Asp Gln Tyr Ile 
    210                 215                 220                 


His His Lys Cys Tyr Gln Glu Phe Ala His Cys Tyr Leu Val Lys Tyr 
225                 230                 235                 240 


Lys Lys Pro Ser Pro Trp Ile Ser Glu Gly Ile Ile Val Asp Gln Cys 
                245                 250                 255     


Pro Leu Pro Arg Ile His Asp Pro Asn Tyr Tyr Lys Tyr Gln Pro Ile 
            260                 265                 270         


Trp Asp Tyr Tyr Leu Lys Ile Gln Asn Ile Arg Pro Gln Gly Trp Thr 
        275                 280                 285             


Ser Lys Ser Tyr Tyr Gly Thr Ala Arg Met Gly Ser Phe Tyr Ile Pro 
    290                 295                 300                 


Thr Phe Leu Arg Asn Asn Thr Val Ser His Val Leu Phe Cys Ser Asp 
305                 310                 315                 320 


Gln Leu Tyr Gly Lys Trp Tyr Asn Ile Glu Asn Asn Ile Gln Glu Asn 
                325                 330                 335     


Glu Gln Leu Leu Lys Thr Lys Leu Tyr Asn Leu Thr Thr Tyr Ser Lys 
            340                 345                 350         


Leu Lys Ala Arg Ala Leu Pro Lys Glu Trp Asn Asn Gln Gly Asn Ala 
        355                 360                 365             


Arg Leu Phe Arg Ser Phe Asn Pro Leu Asp Val Cys Asn Arg Pro Glu 
    370                 375                 380                 


Ala Val Leu Leu Leu Asn Thr Thr Tyr Phe Thr Tyr Ser Leu Trp Glu 
385                 390                 395                 400 


Gly Asp Cys Asn Tyr Thr Thr Ala Leu Ile Gln Asn Leu Thr Glu Cys 
                405                 410                 415     


Arg Gln Pro Asp Arg Leu Lys Leu Lys His Pro Tyr Ala Cys Arg Phe 
            420                 425                 430         


Trp Arg Tyr Lys Glu Gly Gln Glu Glu Val Lys Cys Leu Gly Asn Glu 
        435                 440                 445             


Lys Lys Lys Cys Leu Tyr Tyr Ser Glu Tyr Ser Ser Pro Glu Ala Gln 
    450                 455                 460                 


Phe Asp Phe Gly Phe Leu Ser Tyr Leu Asn Ala Phe Pro Gly Leu Lys 
465                 470                 475                 480 


Tyr Ile Glu Asn Gln Thr Val Arg Glu Pro Glu Tyr Glu Val Tyr Ser 
                485                 490                 495     


Leu Tyr Met Glu Cys Met Asn Ser Ala Glu Lys Tyr Gly Ile Asp Ser 
            500                 505                 510         


Val Leu Phe Ala Leu Lys Thr Phe Leu Asn Phe Thr Gly Thr Pro Val 
        515                 520                 525             


Asn Glu Met Ser Thr Ala Arg Ala Phe Val Gly Leu Thr Asp Pro Lys 
    530                 535                 540                 


Phe Pro Pro Thr Tyr Pro Asn Ile Thr Lys Glu Gln Lys Arg Cys Asn 
545                 550                 555                 560 


Asn Leu Lys Arg Arg Lys Arg Ser Thr Asn Ile Glu Lys Leu Arg Ser 
                565                 570                 575     


Met Gly Tyr Ser Leu Thr Gly Ala Val Gln Thr Leu Ser Gln Ile Ser 
            580                 585                 590         


Asp Ile Asn Asp Glu Arg Leu Gln Gln Gly Val Ser Leu Leu Arg Asp 
        595                 600                 605             


His Val Val Thr Leu Met Glu Ala Ala Leu His Asp Ile Thr Ile Met 
    610                 615                 620                 


Glu Gly Met Leu Ala Ile Gln His Val His Thr His Leu Asn His Leu 
625                 630                 635                 640 


Lys Thr Ile Leu Leu Met Arg Lys Ile Asp Trp Thr Phe Ile Lys Ser 
                645                 650                 655     


Asn Trp Ile Lys Glu Gln Leu Gln Lys Thr Glu Asp Glu Met Lys Ile 
            660                 665                 670         


Ile Arg Arg Thr Ala Lys Ser Leu Val Tyr Tyr Val Thr Gln Thr Ser 
        675                 680                 685             


Ser Ser Thr Thr Ala Thr Ser Trp Glu Ile Gly Ile Tyr Tyr Glu Ile 
    690                 695                 700                 


Thr Ile Pro Lys His Ile Tyr Leu Asn Asn Trp Gln Val Ile Asn Ile 
705                 710                 715                 720 


Gly His Leu Val Glu Ser Ala Gly His Leu Thr Leu Ile Arg Val Lys 
                725                 730                 735     


His Pro Tyr Glu Val Ile Asn Lys Glu Cys Thr Tyr Glu Gln Tyr Leu 
            740                 745                 750         


His Leu Glu Asp Cys Ile Ser Gln Asp Tyr Val Ile Cys Asp Thr Val 
        755                 760                 765             


Gln Ile Val Ser Pro Cys Gly Asn Ser Thr Thr Thr Ser Asp Cys Pro 
    770                 775                 780                 


Val Thr Ala Glu Lys Val Lys Glu Pro Tyr Val Gln Val Ser Ala Leu 
785                 790                 795                 800 


Lys Asn Gly Ser Tyr Leu Val Leu Thr Ser Arg Thr Asp Cys Ser Ile 
                805                 810                 815     


Pro Ala Tyr Val Pro Ser Ile Val Thr Val Asn Glu Thr Val Lys Cys 
            820                 825                 830         


Phe Gly Val Glu Phe His Lys Pro Leu Tyr Ser Glu Ser Lys Val Ser 
        835                 840                 845             


Phe Glu Pro Gln Val Pro His Leu Lys Leu Arg Leu Pro His Leu Val 
    850                 855                 860                 


Gly Ile Ile Ala Asn Leu Gln Asn Leu Glu Ile Glu Val Thr Ser Thr 
865                 870                 875                 880 


Gln Glu Ser Ile Lys Asp Gln Ile Glu Arg Ala Lys Ser Gln Leu Leu 
                885                 890                 895     


Arg Leu Asp Ile His Glu Gly Asp Phe Pro Ala Trp Ile Gln Gln Leu 
            900                 905                 910         


Ala Ser Ala Thr Arg Asp Val Trp Pro Ala Ala Ala Arg Ala Leu Gln 
        915                 920                 925             


Gly Ile Gly Asn Val Leu Ser Asn Thr Ala Gln Gly Ile Phe Gly Thr 
    930                 935                 940                 


Thr Val Ser Ile Leu Ser Tyr Ala Lys Pro Ile Leu Ile Gly Ile Gly 
945                 950                 955                 960 


Val Ile Leu Leu Ile Ala Phe Leu Phe Lys Ile Val Ser Trp Leu Pro 
                965                 970                 975     


Gly Lys Lys Lys Arg Asn 
            980         


<210>  36

<211>  980
<212>  PRT
<213>  Squirrel monkey foamy virus

<220>
<223>  Env (GenBank: ADE05996.1)

<400>  36
Met Ala Arg Pro Met Thr Leu His Glu Trp Leu Lys Trp Lys Lys Thr 
1               5                   10                  15      


Asn Ala Val Arg Gln Leu Thr Glu Asn Leu Gln Ser Leu Pro Pro Glu 
            20                  25                  30          


Gln Lys Glu Leu Leu Ile Gln Glu Ile Glu Glu Glu Asp Val Pro Thr 
        35                  40                  45              


Pro Ser Trp Thr Gln Lys Cys Ser Tyr Met Cys Tyr Leu Ala Cys Ala 
    50                  55                  60                  


Thr Thr Thr Arg Ile Met Gly Trp Ile Ile Phe Thr Leu Ile Ile Ala 
65                  70                  75                  80  


Ser Val Ile Leu Val Thr Cys Phe Val Val Met Ala Arg Ile Gln Trp 
                85                  90                  95      


Arg Asn Ala Ile Thr Val Pro Gly Ile Ile Leu Asp Trp Asn Ser Thr 
            100                 105                 110         


Ser His Glu Val Phe Pro Met Pro Gln Asn Lys Arg Arg Ser Ala Arg 
        115                 120                 125             


Asp Leu Ile Arg Ile Leu Glu Glu Asn Ile Val Glu Ile Asn Thr Thr 
    130                 135                 140                 


Ser Leu Pro Gln Gly Ile Leu Phe Glu Pro His Pro Lys Pro Ile Ile 
145                 150                 155                 160 


Gly Lys Glu Arg Val Leu Gly Leu Ser Gln Val Ile Leu Ile Asn Ser 
                165                 170                 175     


Glu Ser Ile Ala Thr Ser Leu Glu Ile Lys Gln Glu His Lys His Ile 
            180                 185                 190         


Leu Val Glu Met Ile Lys Glu Glu Leu Leu Ser Leu Gln Asn Val Met 
        195                 200                 205             


Leu Asn Phe Asp Leu Pro Leu Gly Asp Pro Lys Thr Gln Gln Glu Tyr 
    210                 215                 220                 


Ile Ser Gln Arg Cys Phe Gln Glu Phe Lys His Cys Tyr Leu Val Ala 
225                 230                 235                 240 


Tyr Asn Glu Thr Gln Lys Pro Trp Pro Thr Asp Asp Val Val Gln Asp 
                245                 250                 255     


Met Cys Pro Leu Pro Gly Asn Gly Tyr Ser Pro Gln Asn Ala Trp Asp 
            260                 265                 270         


Tyr Tyr Leu Glu Ile Lys Asn Ile Arg Pro Glu Asn Trp Thr Ser Lys 
        275                 280                 285             


Asp Tyr Phe Gly Ser Ala Arg Met Gly Gly Phe Trp Val Pro Pro Trp 
    290                 295                 300                 


Leu Arg Gln Asn Asn Tyr Thr His Val Leu Phe Cys Ser Asp Gln Leu 
305                 310                 315                 320 


Tyr Glu Lys Trp Tyr Ile Pro Tyr Gly Leu Thr Glu Glu Asn Asp Val 
                325                 330                 335     


Lys Leu Met Asn Lys Leu Lys Thr Leu Leu Asn Gly Thr Asn Lys Leu 
            340                 345                 350         


Lys Ala Arg Ala Leu Ser Ala Tyr Trp His Pro Gln Gly Gln Asn Lys 
        355                 360                 365             


Leu Phe Arg Asn Ile Thr Arg Leu Asp Tyr Cys Lys Tyr Pro Glu Ala 
    370                 375                 380                 


Val Ile Leu Leu Asn Thr Thr Lys Ser Asp Tyr Ser Leu Trp Glu Gly 
385                 390                 395                 400 


Asp Cys Asn Ile Trp Ala His Asn Ile Thr Val His Pro Ala Cys Lys 
                405                 410                 415     


Asn Phe Asn Phe Ser Glu Lys Ser Lys Val His Pro Tyr Thr Cys Arg 
            420                 425                 430         


His Trp Arg Phe Lys Glu Gly Pro Glu Gln Thr Lys Cys Leu Glu Asp 
        435                 440                 445             


Lys Thr Gln Cys Leu Tyr Tyr Ser Glu Tyr Ser Ser Pro Ser Tyr Leu 
    450                 455                 460                 


Gln Asp Phe Gly Trp Leu Ala Tyr Gln Gly His Phe Pro Ser Pro Ile 
465                 470                 475                 480 


Cys Glu Lys Glu Thr Lys Ile Arg Met Pro Gly Tyr Thr Val Tyr Ser 
                485                 490                 495     


Leu Phe Gly Glu Cys Leu Asn Ala Ala Gln Gln His Gly Ile Glu Arg 
            500                 505                 510         


Ala Leu Ile Gly Leu His Ala Phe Met Asn Phe Thr Lys Thr Pro Leu 
        515                 520                 525             


Gln Glu Val Asn Lys Glu Arg Ala Phe Ile Gly Leu Asp Ser Pro Lys 
    530                 535                 540                 


Trp Pro Pro Thr Tyr Pro Asn Ile Thr Ile Phe Ser Val Asp Lys Cys 
545                 550                 555                 560 


Lys Thr Glu Lys Arg Lys Lys Arg Glu Ile His Asn Trp Gly Lys Leu 
                565                 570                 575     


Gln Ala Val Gly Phe Thr Ile Thr Asn Thr Val Ser Lys Ile Ala Arg 
            580                 585                 590         


Ile Ile Asp Leu Asn Asn Glu His Leu Val Ser Gly Leu Tyr Leu Leu 
        595                 600                 605             


Lys Asp His Leu Val Thr Leu Met Glu Ser Thr Leu His Asp Ile Ser 
    610                 615                 620                 


Ile Leu Gly Asn Ala Val Ala Ile Gln His Phe His Thr His Leu Thr 
625                 630                 635                 640 


Gln Leu Lys Leu Leu Leu Met Glu Asn Arg Met Asp Trp Thr Phe Ile 
                645                 650                 655     


Asp Ser Ser Trp Ile Gln Asp Gln Leu Lys Leu Ser Asp Glu Asp Met 
            660                 665                 670         


Lys Ile Leu Arg Arg Ala Ser Arg Ala Leu Val Tyr Lys Val Glu Glu 
        675                 680                 685             


Ile Gly Glu Gly Val Thr Ser Thr Ile Trp Glu Ile Gly Ile Tyr Tyr 
    690                 695                 700                 


Glu Ile Ile Ile Pro Arg Val Ile Tyr Ser Thr Asn Trp Lys Ile Met 
705                 710                 715                 720 


Asn Leu Gly His Leu Val Tyr Ser Ala Asp Asn Leu Val Gln Ile Asn 
                725                 730                 735     


Val Glu Gln Pro Tyr Glu Ile Leu Asn Val Glu Cys Gly Lys Ser Thr 
            740                 745                 750         


Tyr Leu His Ile Asp Lys Cys Glu Glu Gln Asp Tyr Val Ile Cys Glu 
        755                 760                 765             


Val Ile Gln Glu Lys Gln Pro Cys Gly Asn Gln Ser Gly Ser Asp Cys 
    770                 775                 780                 


Pro Val Lys Ala Arg Thr Ile Glu Lys Gly Tyr Thr Tyr Ile Gln Pro 
785                 790                 795                 800 


Leu Lys Asn Gly Ser Tyr Val Val Met Ser His Phe Gln Asp Cys His 
                805                 810                 815     


Ile Lys Pro Tyr Ile Pro Gln Ile Val Thr Val Asn Ala Thr Val Lys 
            820                 825                 830         


Cys Leu Gly Glu Val Phe Gln Pro Pro Leu Val Pro Gly Asn Ser Ser 
        835                 840                 845             


Thr Glu Val Leu Pro Val Thr Thr Ser Leu Lys Leu Gln Leu Pro His 
    850                 855                 860                 


Leu Val Gly Ile Ile Thr Lys Leu Lys Gly Phe Gln Val Gln Ile Thr 
865                 870                 875                 880 


Ser Thr Trp Glu Ser Ile Lys Gly Gln Val Glu Gln Ala Gln Ala Glu 
                885                 890                 895     


Leu Leu Arg Leu Asp Leu His Glu Gly Asp Ser Gly Gln Trp Ile Lys 
            900                 905                 910         


Gln Leu Ala Ser Ala Ser Lys Asp Ile Trp Pro Ala Ala Ala Thr Val 
        915                 920                 925             


Leu Gly Lys Ile Gly Asp Phe Leu Gly Gly Thr Ala Gly Ser Ile Phe 
    930                 935                 940                 


Gly Ile Phe Gly Tyr Leu Lys Pro Ile Phe Ile Gly Leu Thr Ile Leu 
945                 950                 955                 960 


Ile Leu Ile Val Leu Val Phe Lys Ile Leu Ser Trp Leu Pro Thr Lys 
                965                 970                 975     


Arg Lys Ala Gln 
            980 


<210>  37

<211>  986
<212>  PRT
<213>  equine foamy virus

<220>
<223>  Env (NCBI Reference: NP_054717.1)

<400>  37
Met Thr Pro Pro Met Thr Leu Pro Glu Trp Met Gln Trp Arg Tyr Arg 
1               5                   10                  15      


Gln Asn Val Asn Lys Ile Arg Glu Ala Ile Pro Asp Val Gln Ile Asp 
            20                  25                  30          


Leu Pro Val Tyr Asn Pro Asp Met Thr Lys Pro Leu Pro Leu Cys Leu 
        35                  40                  45              


Arg Ile Lys Tyr Trp Met Tyr Leu Leu Cys Ala Thr Ser Pro Arg Val 
    50                  55                  60                  


Met Ala Trp Leu Leu Phe Val Cys Val Leu Ile Ser Val Met Ile Ile 
65                  70                  75                  80  


Ala Val Ile Val Thr Val Phe Arg Met Gln Trp Lys Ala Ala Ile Asp 
                85                  90                  95      


Val Pro Gly Pro Val Leu Phe Trp Asn His Thr Asp Val Leu Thr His 
            100                 105                 110         


Val Pro Pro Val Gly Pro His Val Thr Arg Leu Arg Arg Ala Val His 
        115                 120                 125             


Leu Ala Asp Arg Ala Val Asn Ile Asn Ile Thr His Ile Pro Gln Gly 
    130                 135                 140                 


Val Phe Leu Glu Pro Phe Pro Lys Pro Ile Ile Asp Lys Glu Arg Val 
145                 150                 155                 160 


Leu Gly Ile Ser Gln Ile Val Met Ile Asp Ser Gly Ser Ile Ala Gln 
                165                 170                 175     


Ser Met Asn Leu Asp Leu Tyr Met Lys His Leu Leu Val Asp Met Ile 
            180                 185                 190         


Asn Glu Glu Met Val Ala Leu Ser Asn Val Val Leu Pro Phe Glu Leu 
        195                 200                 205             


Pro Val Gly Asp Pro Ser Thr Gln Asp Gln Tyr Ile His Lys Arg Cys 
    210                 215                 220                 


Tyr Gln Gln Phe Ala His Cys Tyr Ile Val Trp Gln Pro Gly Arg Arg 
225                 230                 235                 240 


Val Trp Pro Thr Ser Glu Ile Ile Gln Asp Gln Cys Pro Leu Pro Asp 
                245                 250                 255     


His Pro Tyr Arg Pro Leu Gly Tyr Met Gln Gln Asn Ala Tyr Asp Leu 
            260                 265                 270         


Tyr Leu Gln Pro Pro Arg Tyr Gly Leu Gln Asn Val Asn Leu Thr Ser 
        275                 280                 285             


Leu Tyr Gly Ile Ala Arg Ile Gly Ala Tyr Arg Val Leu Tyr Pro Glu 
    290                 295                 300                 


Gln Tyr Asn Ala Thr Ile Phe Cys Ser Asp Gln Leu Tyr Gly Asn Trp 
305                 310                 315                 320 


Trp Tyr Leu Asn Arg Thr Ser Glu Gln Lys Glu Glu Thr Tyr Arg Lys 
                325                 330                 335     


Lys Met Leu Asn Leu Thr Glu Asn Asn Ser Ser Ile Leu Lys Asp Arg 
            340                 345                 350         


Ala Leu Pro Pro Thr Trp Thr Pro Lys Gly Gln Ala Arg Leu Phe Arg 
        355                 360                 365             


Glu Leu Asn Pro Leu Asp Phe Cys Thr Lys Pro Glu Ala Val Met Leu 
    370                 375                 380                 


Leu Asn Gln Ser Tyr Tyr Thr Trp Ser Leu Trp Glu Gly Asp Cys Tyr 
385                 390                 395                 400 


Val Tyr Ser Arg Asn Ile Ser Phe Pro Pro Glu Cys Ile Asn Tyr Thr 
                405                 410                 415     


Arg Ile Ala Asn Lys Thr Ala His Pro Tyr Ala Cys Arg His Trp Arg 
            420                 425                 430         


Leu Leu Ser Thr Asn Asn Glu Gly Lys Asp Glu Ile Lys Cys Ser Glu 
        435                 440                 445             


Tyr Gly Cys Leu Phe Tyr Pro Lys Tyr Asp Gln Phe Glu Leu Ala Asn 
    450                 455                 460                 


Asp Phe Gly Phe Leu Ala Tyr Gln Lys Met Phe Pro Ser Pro Ile Cys 
465                 470                 475                 480 


Ile Gln Asn Tyr Ser Leu Ser Thr Glu Pro Tyr Lys Val Gln Ser Leu 
                485                 490                 495     


Tyr Gln Glu Cys Ile Gln Lys Gly Thr Ser Tyr Asp Leu Glu Asp Val 
            500                 505                 510         


Ile Asn Gln Leu Leu Arg Val Leu Gln Asn Asn Gly Ile Asp Leu Gly 
        515                 520                 525             


Lys Val Pro Ala Ser Arg Ala Phe Thr Pro Phe Tyr Asn Gln Met Pro 
    530                 535                 540                 


Val Ser Tyr Lys Lys Arg Asp Val Thr Lys Arg Lys Ser Cys Gly Arg 
545                 550                 555                 560 


Arg Lys Arg Gly Asp Asn Phe Arg Lys Leu Gln Thr Ser Gly Leu Ser 
                565                 570                 575     


Met Asn Gln Ala Ile Ser Thr Leu Ala Lys Ile Ser Asp Leu Asn Asp 
            580                 585                 590         


Glu Asn Leu Ala Ala Gly Ile His Leu Leu Gln Glu His Ile Val Thr 
        595                 600                 605             


Leu Met Glu Ala Thr Val His Asp Ile Ser Met Leu Glu Ala Ala His 
    610                 615                 620                 


Gly Leu Gln Ile Leu His Thr His Leu Ser Thr Leu Arg Leu Leu Leu 
625                 630                 635                 640 


Thr Glu Asn Arg Val Asp Trp Asn Leu Ile Asp Ser Thr Trp Ile Gln 
                645                 650                 655     


Gln Gln Leu Gln Ala Asp Glu Ala Leu Met Asn Val Ile Arg Arg Thr 
            660                 665                 670         


Ala Arg Ser Met Thr Tyr Arg Val Ile Gln Gln Ile Asn Arg Pro Asp 
        675                 680                 685             


Met Thr Leu Trp Glu Leu Gly Ile Tyr Tyr Glu Leu Ile Ile Pro Lys 
    690                 695                 700                 


Lys Val Trp Leu Thr Asn Trp Lys Ile Gln Asn Ile Gly His Leu Ile 
705                 710                 715                 720 


Lys Asn Ala Gly His Leu Ala Arg Val Glu Leu Gln His Pro Tyr Glu 
                725                 730                 735     


Ile Val Asn Gln Asp Cys Glu Gln Leu Thr Tyr Leu Glu Leu Lys Gly 
            740                 745                 750         


Cys Gln Glu Leu Asp Tyr Leu Val Cys Glu Glu Ile Leu Gln His Glu 
        755                 760                 765             


Pro Cys Gly Asn Gln Thr Gly Ser Asp Cys Pro Val Thr Ala Gln Lys 
    770                 775                 780                 


Ile Lys Asp Pro Tyr Val Trp Ile Tyr Pro Leu Lys Asn Gly Ser Tyr 
785                 790                 795                 800 


Leu Ile Met Ser Ser His Thr Asp Cys Ala Ile Pro Pro Tyr Glu Pro 
                805                 810                 815     


Val Leu Val Thr Val Asn Asp Thr Val Arg Cys Phe Gly Thr Thr Leu 
            820                 825                 830         


Lys Lys Pro Leu Arg Thr Ser Leu Glu Thr Phe Thr Phe Gln Pro His 
        835                 840                 845             


Ile Pro Gln Leu Gln Val Arg Leu Pro His Leu Val Gly Leu Ile Ala 
    850                 855                 860                 


Lys Ile Lys Gly Leu Lys Ile Glu Ile Thr Ser Thr Trp Glu Asn Ile 
865                 870                 875                 880 


Lys Asp Gln Ile Lys Arg Ser Glu Ala Glu Leu Leu Arg Leu Asp Leu 
                885                 890                 895     


His Glu Gly Asp Tyr Ala Glu Trp Thr Lys Gln Leu Gly Lys Ala Leu 
            900                 905                 910         


Glu Asp Ile Trp Pro Ala Ala Ala Gln Thr Val Ser Lys Ile Gly Asp 
        915                 920                 925             


Phe Leu Gly Lys Ile Ala Asp Gly Ile Phe Gly Thr Thr Phe Ser Leu 
    930                 935                 940                 


Leu Thr Tyr Ala Lys Pro Val Ile Ile Gly Ile Val Val Ile Val Leu 
945                 950                 955                 960 


Leu Ile Leu Ile Ile Arg Ile Leu Ser Trp Leu Ala Ala Leu Gly Pro 
                965                 970                 975     


Arg Arg Arg Arg Arg Glu Asp Lys Gly Glu 
            980                 985     


<210>  38

<211>  990
<212>  PRT
<213>  Bovine Foamy Virus

<220>
<223>  Env (GenBank: AFR79240.1)

<400>  38
Met Ala Pro Pro Met Thr Leu Gln Gln Trp Leu Gln Trp Arg Tyr Asn 
1               5                   10                  15      


Leu Glu Thr Thr Asn Leu Leu Gln Met Asn Pro Lys Met Glu Ser Ile 
            20                  25                  30          


Cys Leu Pro Asp Phe Glu Pro Pro Gly Asp Glu Glu Val Ser Leu Arg 
        35                  40                  45              


Met Lys Cys Lys Tyr Trp Ile Tyr Leu Cys Cys Ala Thr Ser Thr Arg 
    50                  55                  60                  


Ile Met Ala Trp Ile Val Phe Ile Phe Thr Val Leu Ser Ile Leu Leu 
65                  70                  75                  80  


Ile Ser Val Leu Ile Ala Val Phe Arg Leu Gln Trp Lys Gly Ala Ile 
                85                  90                  95      


Glu Ser Pro Gly Pro Ile Leu Val Trp Asn Asn Ser Asn Ser Ile Asn 
            100                 105                 110         


Ala Gln Ser Thr Thr Pro Pro His Tyr Ser Arg Leu Arg Arg Ala Ile 
        115                 120                 125             


His Leu Ala Gln Lys Pro Val Gln Val Asn Phe Thr Ser Ile Pro Gln 
    130                 135                 140                 


Gly Leu Phe Leu Glu Pro His Pro Lys Pro Ile Ile Ser Lys Glu Arg 
145                 150                 155                 160 


Val Leu Gly Leu Ser Gln Val Val Met Val Asp Ser Ser Ser Leu Thr 
                165                 170                 175     


Gln Lys Leu Asn Leu Val Gly Glu Ala Lys Ser Leu Leu Ile Lys Thr 
            180                 185                 190         


Ile Asn Glu Glu Leu Ile Ser Leu Gln Asp Val Val Leu Asn Phe Asp 
        195                 200                 205             


Leu Pro Leu Gly Asp Pro His Thr Gln Glu Glu Tyr Ile Ala Lys Arg 
    210                 215                 220                 


Cys Tyr Gln His Phe Gly His Cys Tyr Val Val His Ile Pro Gly Gly 
225                 230                 235                 240 


Lys Glu Trp Pro Thr Arg Glu Ile Ile Gln Asp Gln Cys Pro Leu Asn 
                245                 250                 255     


Asn Ser Trp Leu Thr Ala Leu His Tyr Asp Tyr Leu Pro Ala Trp Asp 
            260                 265                 270         


Tyr Tyr Asn Gln Pro Pro Pro Arg Gln Leu Ser Leu Glu Asp Phe Arg 
        275                 280                 285             


Lys Tyr Asn Ile Ser Asn Asn Gly Ser Arg Tyr Glu Ala Tyr Arg Leu 
    290                 295                 300                 


Pro Leu Gln Asp Lys Ile Gly Ala Val Ala Phe Cys Ser Pro Thr Leu 
305                 310                 315                 320 


Tyr Ser Ser Trp Trp Asn Tyr Thr Gln Ser Ser Arg Glu Arg Glu Glu 
                325                 330                 335     


Leu Phe Arg Arg Lys Leu Glu Thr Phe Leu Asn Pro Gln Thr Gly Cys 
            340                 345                 350         


Leu Asn Pro Glu Ala Leu Pro Gly Thr Trp His Thr Leu Gly Lys Gly 
        355                 360                 365             


Glu Trp Phe Lys Asp Leu Thr Thr Tyr Asp Phe Cys Lys Lys Pro Glu 
    370                 375                 380                 


Ala Val Phe Gly Leu Asn Lys Thr Tyr Tyr Ser Trp Ser Leu Trp Glu 
385                 390                 395                 400 


Gly Asp Cys Gly Arg Gln Gly Asn Asp Thr Gln Asn Tyr Pro Pro Glu 
                405                 410                 415     


Cys Arg Asn Tyr Glu Lys Arg Asp Gly Val His Val Tyr Gly Cys Arg 
            420                 425                 430         


Tyr Trp Arg Thr Tyr Ser Gln Thr Ala His Thr Ser Asp Asn Val Ser 
        435                 440                 445             


Cys Tyr Leu Ser Glu Asp His Cys Leu Phe Gln Pro Lys Trp Asp Ser 
    450                 455                 460                 


Ala Glu Ile Arg Ser Asp Leu Gly Tyr Leu Ala Tyr Leu Gly Ala Phe 
465                 470                 475                 480 


Pro Ser Pro Ile Cys Ile Glu Ala Lys Asn Leu Thr Asp Gln Asp Tyr 
                485                 490                 495     


Lys Val Thr Ser Ile Tyr Ala Glu Cys Val Lys Gln Gly Lys Gln Tyr 
            500                 505                 510         


Asp Ile Ala Asp Val Thr Arg Gln Leu Ala Ser Lys Leu Thr Arg Arg 
        515                 520                 525             


Gly Val Phe Leu Gly Asp Leu Pro Ala Asp Arg Ala Phe Ser Leu Leu 
    530                 535                 540                 


Ser Asp Phe Ser Leu Pro Asp Ser Tyr Gln Asn Lys Thr Gln Asp Gly 
545                 550                 555                 560 


Arg Arg Arg Val Cys Ser Ser Lys Arg Thr Arg Arg Ser Ile Asn Asn 
                565                 570                 575     


Trp Arg Arg Leu Gln Ile Ala Gly Gln Ser Met Asn Gln Ala Ile Thr 
            580                 585                 590         


Thr Leu Ser Lys Leu Ser Asp Leu Asn Asp Glu Asn Leu Ala Ala Gly 
        595                 600                 605             


Ile His Leu Leu Gln Asp His Ile Ile Thr Leu Met Glu Ala Thr Leu 
    610                 615                 620                 


His Asp Val Ser Leu Leu Gly His Met Ala Ser Ile Gln His Leu His 
625                 630                 635                 640 


Thr His Leu Ala Thr Phe Lys Asn Leu Leu Ile Gly Asn Arg Val Asp 
                645                 650                 655     


Trp Ser Val Leu Glu Ser Arg Trp Ile Gln Glu Glu Leu Lys Tyr Thr 
            660                 665                 670         


Asp Glu Val Met Asn Val Ile Arg Arg Thr Ala Arg Ser Ile Thr Tyr 
        675                 680                 685             


Asp Val Gln Asn Val Lys Asn Thr Ser Asp Ser Thr Ile Trp Glu Ile 
    690                 695                 700                 


Tyr Ile Tyr Tyr Glu Leu Ile Leu Pro Glu Arg Ile Trp Ile Arg Asn 
705                 710                 715                 720 


Trp Gln Val Ala Asn Leu Gly His Leu Thr Tyr Asn Ser Gly His Leu 
                725                 730                 735     


Thr His Val Thr Ile His His Pro Tyr Glu Ile Val Asn Gln Asp Cys 
            740                 745                 750         


Glu Glu Leu Thr Phe Leu His Leu Val Asp Cys His Glu Gln Asp Tyr 
        755                 760                 765             


Leu Ile Cys Glu Glu Val Val Glu Val Glu Pro Cys Gly Asn Leu Thr 
    770                 775                 780                 


Gly Ser Asp Cys Pro Val Leu Ala Glu Asn Ile Gln Ala Pro Tyr Val 
785                 790                 795                 800 


Tyr Leu His Pro Leu Lys Asn Gly Ser Tyr Leu Leu Met Ala Ser His 
                805                 810                 815     


Thr Asp Cys Ser Leu Pro Pro Tyr Glu Pro Val Val Val Thr Val Asn 
            820                 825                 830         


Asp Ser Leu Glu Cys Tyr Gly Lys Pro Leu Lys Arg Pro Leu Thr Ser 
        835                 840                 845             


His Thr Glu Ile Lys Leu Phe Ala Pro Gln Ile Pro Gln Leu Arg Val 
    850                 855                 860                 


Arg Leu Pro His Leu Val Gly Ile Ile Ala Lys Leu Lys Ser Leu Lys 
865                 870                 875                 880 


Ile Lys Val Thr Ser Thr Trp Glu Ser Ile Lys Asp Gln Ile His Arg 
                885                 890                 895     


Ser Glu Gln Glu Leu Leu Arg Leu Asp Leu His Glu Gly Asp Tyr Ser 
            900                 905                 910         


Asp Trp Ile Leu Gln Leu Gly Asn Ala Leu Glu Asp Val Trp Pro Val 
        915                 920                 925             


Ala Ala Ser Ala Val Ser Thr Ile Gly Thr Leu Leu Glu Lys Ala Ala 
    930                 935                 940                 


Gly Thr Leu Phe Gly Asn Val Phe Ser Ile Leu Ala Tyr Ala Lys Pro 
945                 950                 955                 960 


Val Ile Ile Gly Ile Ile Leu Ile Ile Leu Leu Leu Leu Val Ile Arg 
                965                 970                 975     


Ile Leu Arg Trp Leu Ala Val Gly Arg Arg Arg Lys Gln Glu 
            980                 985                 990 


<210>  39

<211>  982
<212>  PRT
<213>  Feline Foamy virus

<220>
<223>  Env (GenBank: CAA11582.1)

<400>  39
Met Glu Gln Glu His Val Met Thr Leu Lys Glu Trp Met Glu Trp Asn 
1               5                   10                  15      


Ala His Lys Gln Leu Gln Lys Leu Gln Ser Thr His Pro Glu Leu His 
            20                  25                  30          


Val Asp Ile Pro Glu Asp Ile Pro Leu Val Pro Glu Lys Val Pro Leu 
        35                  40                  45              


Lys Met Arg Met Arg Tyr Arg Cys Tyr Thr Leu Cys Ala Thr Ser Thr 
    50                  55                  60                  


Arg Ile Met Phe Trp Ile Leu Phe Phe Leu Leu Cys Phe Ser Ile Val 
65                  70                  75                  80  


Thr Leu Ser Thr Ile Ile Ser Ile Leu Arg Tyr Gln Trp Lys Glu Ala 
                85                  90                  95      


Ile Thr His Pro Gly Pro Val Leu Ser Trp Gln Val Thr Asn Ser His 
            100                 105                 110         


Val Thr Met Gly Gly Asn Thr Ser Ser Ser Ser Arg Arg Arg Arg Asp 
        115                 120                 125             


Ile Gln Tyr His Lys Leu Pro Val Glu Val Asn Ile Ser Gly Ile Pro 
    130                 135                 140                 


Gln Gly Leu Phe Phe Ala Pro Gln Pro Lys Pro Ile Phe His Lys Glu 
145                 150                 155                 160 


Arg Thr Leu Gly Leu Ser Gln Val Ile Leu Ile Asp Ser Asp Thr Ile 
                165                 170                 175     


Thr Gln Gly His Ile Lys Gln Gln Lys Ala Tyr Leu Val Ser Thr Ile 
            180                 185                 190         


Asn Glu Glu Met Glu Gln Leu Gln Lys Thr Val Leu Pro Phe Asp Leu 
        195                 200                 205             


Pro Ile Lys Asp Pro Leu Thr Gln Lys Glu Tyr Ile Glu Lys Arg Cys 
    210                 215                 220                 


Phe Gln Lys Tyr Gly His Cys Tyr Val Ile Ala Phe Asn Gly Asn Lys 
225                 230                 235                 240 


Val Trp Pro Ser Gln Asp Leu Ile Gln Asp Gln Cys Pro Leu Pro Pro 
                245                 250                 255     


Arg Phe Gly Asn Asn Leu Lys Tyr Arg Asn His Thr Ile Trp Lys Tyr 
            260                 265                 270         


Tyr Ile Pro Leu Pro Phe Lys Val Ser Ser Asn Trp Thr Arg Val Glu 
        275                 280                 285             


Ser Tyr Gly Asn Ile Arg Ile Gly Ser Phe Lys Val Pro Asp Glu Phe 
    290                 295                 300                 


Arg Gln Asn Ala Thr His Gly Ile Phe Cys Ser Asp Ala Leu Tyr Ser 
305                 310                 315                 320 


Asn Trp Tyr Pro Arg Asp Leu Pro Ser Ser Val Gln Gln Ser Phe Ala 
                325                 330                 335     


Gln Ala Tyr Ile Thr Lys Val Leu Met Lys Arg Lys Lys Gln Pro Thr 
            340                 345                 350         


Leu Arg Asp Ile Ala Phe Pro Lys Glu Leu Ser Pro Val Gly Ser Gly 
        355                 360                 365             


Met Leu Phe Arg Pro Ile Asn Pro Tyr Asp Ile Cys Asn Met Pro Arg 
    370                 375                 380                 


Ala Val Leu Leu Leu Asn Lys Thr Tyr Tyr Thr Phe Ser Leu Trp Glu 
385                 390                 395                 400 


Gly Asp Cys Gly Tyr Tyr Gln His Asn Leu Thr Leu His Pro Ala Cys 
                405                 410                 415     


Lys Asn Phe Asn Arg Thr Arg Gln Asp His Pro Tyr Ala Cys Arg Phe 
            420                 425                 430         


Trp Arg Asn Lys Tyr Asp Ser Glu Ser Val Gln Cys Tyr Asn Asn Asp 
        435                 440                 445             


Met Cys Tyr Tyr Arg Pro Leu Tyr Asp Gly Thr Glu Asn Thr Glu Asp 
    450                 455                 460                 


Trp Gly Trp Leu Ala Tyr Thr Asp Ser Phe Pro Ser Pro Ile Cys Ile 
465                 470                 475                 480 


Glu Glu Lys Arg Ile Trp Lys Lys Asn Tyr Thr Leu Ser Ser Val Leu 
                485                 490                 495     


Ala Glu Cys Val Asn Gln Ala Met Glu Tyr Gly Ile Asp Glu Val Leu 
            500                 505                 510         


Ser Lys Leu Asp Leu Ile Phe Gly Asn Leu Thr His Gln Ser Ala Asp 
        515                 520                 525             


Glu Ala Phe Ile Pro Val Asn Asn Phe Thr Trp Pro Arg Tyr Glu Lys 
    530                 535                 540                 


Gln Asn Lys Gln Gln Lys Thr Ser Cys Glu Arg Lys Lys Gly Arg Arg 
545                 550                 555                 560 


Gln Arg Arg Ser Val Ser Thr Glu Asn Leu Arg Arg Ile Gln Glu Ala 
                565                 570                 575     


Gly Leu Gly Leu Ala Asn Ala Ile Thr Thr Val Ala Lys Ile Ser Asp 
            580                 585                 590         


Leu Asn Asp Gln Lys Leu Ala Lys Gly Val His Leu Leu Arg Asp His 
        595                 600                 605             


Val Val Thr Leu Met Glu Ala Asn Leu Asp Asp Ile Val Ser Leu Gly 
    610                 615                 620                 


Glu Gly Ile Gln Ile Glu His Ile His Asn His Leu Thr Ser Leu Lys 
625                 630                 635                 640 


Leu Leu Thr Leu Glu Asn Arg Ile Asp Trp Arg Phe Ile Asn Asp Ser 
                645                 650                 655     


Trp Ile Gln Glu Glu Leu Gly Val Ser Asp Asn Ile Met Lys Val Ile 
            660                 665                 670         


Arg Lys Thr Ala Arg Cys Ile Pro Tyr Asn Val Lys Gln Thr Arg Asn 
        675                 680                 685             


Leu Asn Thr Ser Thr Ala Trp Glu Ile Tyr Leu Tyr Tyr Glu Ile Ile 
    690                 695                 700                 


Ile Pro Thr Thr Ile Tyr Thr Gln Asn Trp Asn Ile Lys Asn Leu Gly 
705                 710                 715                 720 


His Leu Val Arg Asn Ala Gly Tyr Leu Ser Lys Val Trp Ile Gln Gln 
                725                 730                 735     


Pro Phe Glu Val Leu Asn Gln Glu Cys Gly Thr Asn Ile Tyr Leu His 
            740                 745                 750         


Met Glu Glu Cys Val Asp Gln Asp Tyr Ile Ile Cys Glu Glu Val Met 
        755                 760                 765             


Glu Leu Pro Pro Cys Gly Asn Gly Thr Gly Ser Asp Cys Pro Val Leu 
    770                 775                 780                 


Thr Lys Pro Leu Thr Asp Glu Tyr Leu Glu Ile Glu Pro Leu Lys Asn 
785                 790                 795                 800 


Gly Ser Tyr Leu Val Leu Ser Ser Thr Thr Asp Cys Gly Ile Pro Ala 
                805                 810                 815     


Tyr Val Pro Val Val Ile Thr Val Asn Asp Thr Ile Ser Cys Phe Asp 
            820                 825                 830         


Lys Glu Phe Lys Arg Pro Leu Lys Gln Glu Leu Lys Val Thr Lys Tyr 
        835                 840                 845             


Ala Pro Ser Val Pro Gln Leu Glu Leu Arg Val Pro Arg Leu Thr Ser 
    850                 855                 860                 


Leu Ile Ala Lys Ile Lys Gly Ile Gln Ile Glu Ile Thr Ser Ser Trp 
865                 870                 875                 880 


Glu Thr Ile Lys Glu Gln Val Ala Arg Ala Lys Ala Glu Leu Leu Arg 
                885                 890                 895     


Leu Asp Leu His Glu Gly Asp Tyr Pro Glu Trp Leu Gln Leu Leu Gly 
            900                 905                 910         


Glu Ala Thr Lys Asp Val Trp Pro Thr Ile Ser Asn Phe Val Ser Gly 
        915                 920                 925             


Ile Gly Asn Phe Ile Lys Asp Thr Ala Gly Gly Ile Phe Gly Thr Ala 
    930                 935                 940                 


Phe Ser Phe Leu Gly Tyr Val Lys Pro Val Leu Leu Gly Phe Val Ile 
945                 950                 955                 960 


Ile Phe Cys Ile Ile Leu Ile Ile Lys Ile Ile Gly Trp Leu Gln Asn 
                965                 970                 975     


Thr Arg Lys Lys Asp Gln 
            980         



<210>  40

<211>  2975
<212>  DNA
<213>  artificial sequence

<220>
<223>  Description of artificial sequence: Synthetic polynucleotide

<220>
<223>  FV_EM20_HCO_Seq


<400>  40
ccatggcccc tcccatgacc ctgcagcagt ggatcatctg gaagaagatg aacaaggccc     60
acgaggccct gcagaacacc accaccgtga ccgagcagca gaaagagcag atcatcctgg    120
acatccagaa cgaggaagtg cagcccacca ggcgggacaa gttcagatac ctgctgtaca    180
cctgctgcgc cacctccagc cgggtgctgg cctggatgtt cctggtgtgc atcctgctga    240
tcatcgtgct ggtgtcctgc ttcgtgacca tcagccggat ccagtggaac aaggacatcc    300
aggtgctggg ccccgtgatc gactggaacg tgacccagcg ggccgtgtac cagcccctgc    360
agacccggcg gatcgcccgg tccctgcgga tgcagcaccc cgtgcccaag tacgtggagg    420
tgaacatgac cagcatcccc cagggcgtgt actacgagcc ccaccccgag cccatcgtgg    480
tgaaagaaag agtgctgggc ctgagccaga tcctgatgat caacagcgag aacatcgcca    540
acaacgccaa cctgacccag gaagtgaaga aactgctgac cgagatggtg aacgaagaga    600
tgcagagcct gagcgacgtg atgatcgact tcgagatccc cctgggcgac cccagggacc    660
aggaacagta catccaccgg aagtgctacc aggaatttgc caactgctac ctggtgaagt    720
acaaagagcc caagccctgg cccaaagagg gcctgatcgc cgaccagtgc cccctgcccg    780
gctatcacgc cggcctgacc tacaaccggc agagcatctg ggactactac atcaaggtgg    840
agagcatcag gcccgccaac tggaccacca agagcaagta cggccaggcc cggctgggca    900
gcttctacat ccccagcagc ctgcggcaga tcaacgtgag ccacgtgctg ttctgcagcg    960
accagctgta cagcaagtgg tacaacatcg agaacaccat cgagcagaac gagcggttcc   1020
tgctgaacaa gctgaataac ctgaccagcg gcaccagcgt gctgaagaag agagccctgc   1080
ccaaggactg gtccagccag ggcaagaacg ccctgttccg ggagatcaat gtgctggaca   1140
tctgcagcaa gcccgagagc gtgatcctgc tgaataccag ctactacagc ttcagcctgt   1200
gggagggcga ctgcaacttc accaaggaca tgatcagcca gctggtgccc gagtgcgacg   1260
gcttctacaa caactccaag tggatgcaca tgcaccccta cgcctgccgg ttctggcgga   1320
gcaagaacga gaaagaggaa accaagtgcc gggacggcga gaccaagcgg tgcctgtact   1380
accccctgtg ggacagccct gagagcacct acgacttcgg ctacctggcc taccagaaga   1440
acttccccag ccccatctgc atcgaacagc agaagatccg ggaccaggac tacgaggtgt   1500
acagcctgta ccaggaatgc aagatcgcca gcaaggccta cggcatcgac accgtgctgt   1560
tcagcctgaa gaatttcctg aactacaccg gcacccccgt gaacgagatg cccaacgcca   1620
gggccttcgt gggcctgatt gaccccaagt tcccccccag ctaccccaac gtgacccggg   1680
agcactacac cagctgcaac aaccggaagc ggactagcgt ggacaacaac tacgccaagc   1740
tgcggagcat gggctacgct ctgacaggcg ccgtgcagac cctgtcccag atcagcgaca   1800
tcaacgacga gaacctgcag cagggcatct acctgctgcg ggaccacgtg atcaccctga   1860
tggaagccac cctgcacgac atcagcgtga tggaaggcat gttcgccgtg cagcacctgc   1920
acacccacct gaatcacctg aaaaccatgc tgctggaacg gcgcatcgac tggacctaca   1980
tgagcagcac ctggctgcag cagcagctgc agaaaagcga cgacgagatg aaggtgatca   2040
agcggatcgc cagatctctg gtgtactacg tgaagcagac ccacagcagc cccaccgcca   2100
ccgcctggga gatcggcctg tactatgagc tggtgatccc caagcacatc tacctgaaca   2160
actggaatgt ggtgaacatc ggccacctgg tgaaaagcgc cggacagctg acccacgtga   2220
ccatcgccca cccctacgag atcatcaaca aagaatgcgt ggagaccatc tatctgcacc   2280
tggaagattg cacccggcag gactacgtga tctgcgacgt ggtgaagatc gtgcagccct   2340
gcggcaacag cagcgacacc agcgactgcc ccgtgtgggc cgaggccgtg aaagaaccct   2400
tcgtgcaggt gaaccccctg aagaacggct cctacctggt gctggccagc agcaccgact   2460
gccagatccc cccctacgtg cccagcatcg tgaccgtgaa tgagaccacc tcctgcttcg   2520
gcctggactt caagcggccc ctggtggccg aggaaagact gagcttcgag ccccggctgc   2580
ccaacctgca gctgaggctg ccccacctgg tgggcatcat cgccaagatc aagggcatca   2640
agatcgaggt gaccagcagc ggcgagagca tcaaagaaca gatcgagcgg gccaaggccg   2700
agctgctgcg gctggatatc cacgagggcg acacacccgc ctggatccag cagctggccg   2760
ccgccaccaa ggacgtgtgg cccgctgcag ccagcgccct gcagggcatc ggcaactttc   2820
tgagcggcac cgcccagggc atcttcggca ccgccttctc cctgctgggc tacctgaagc   2880
ccatcctgat cggcgtgggc gtgattctgc tggtgattct gatcttcaag atcgtgagct   2940
ggatccccac caagaaaaag aaccagtgac tcgag                              2975


<210>  41

<211>  2967
<212>  RNA
<213>  artificial sequence

<220>
<223>  Description of artificial sequence: Synthetic polynucleotide

<220>
<223>  FV_EM20_HCO_Seq

<400>  41
auggccccuc ccaugacccu gcagcagugg aucaucugga agaagaugaa caaggcccac     60
gaggcccugc agaacaccac caccgugacc gagcagcaga aagagcagau cauccuggac    120
auccagaacg aggaagugca gcccaccagg cgggacaagu ucagauaccu gcuguacacc    180
ugcugcgcca ccuccagccg ggugcuggcc uggauguucc uggugugcau ccugcugauc    240
aucgugcugg uguccugcuu cgugaccauc agccggaucc aguggaacaa ggacauccag    300
gugcugggcc ccgugaucga cuggaacgug acccagcggg ccguguacca gccccugcag    360
acccggcgga ucgcccgguc ccugcggaug cagcaccccg ugcccaagua cguggaggug    420
aacaugacca gcauccccca gggcguguac uacgagcccc accccgagcc caucguggug    480
aaagaaagag ugcugggccu gagccagauc cugaugauca acagcgagaa caucgccaac    540
aacgccaacc ugacccagga agugaagaaa cugcugaccg agauggugaa cgaagagaug    600
cagagccuga gcgacgugau gaucgacuuc gagauccccc ugggcgaccc cagggaccag    660
gaacaguaca uccaccggaa gugcuaccag gaauuugcca acugcuaccu ggugaaguac    720
aaagagccca agcccuggcc caaagagggc cugaucgccg accagugccc ccugcccggc    780
uaucacgccg gccugaccua caaccggcag agcaucuggg acuacuacau caagguggag    840
agcaucaggc ccgccaacug gaccaccaag agcaaguacg gccaggcccg gcugggcagc    900
uucuacaucc ccagcagccu gcggcagauc aacgugagcc acgugcuguu cugcagcgac    960
cagcuguaca gcaaguggua caacaucgag aacaccaucg agcagaacga gcgguuccug   1020
cugaacaagc ugaauaaccu gaccagcggc accagcgugc ugaagaagag agcccugccc   1080
aaggacuggu ccagccaggg caagaacgcc cuguuccggg agaucaaugu gcuggacauc   1140
ugcagcaagc ccgagagcgu gauccugcug aauaccagcu acuacagcuu cagccugugg   1200
gagggcgacu gcaacuucac caaggacaug aucagccagc uggugcccga gugcgacggc   1260
uucuacaaca acuccaagug gaugcacaug caccccuacg ccugccgguu cuggcggagc   1320
aagaacgaga aagaggaaac caagugccgg gacggcgaga ccaagcggug ccuguacuac   1380
ccccuguggg acagcccuga gagcaccuac gacuucggcu accuggccua ccagaagaac   1440
uuccccagcc ccaucugcau cgaacagcag aagauccggg accaggacua cgagguguac   1500
agccuguacc aggaaugcaa gaucgccagc aaggccuacg gcaucgacac cgugcuguuc   1560
agccugaaga auuuccugaa cuacaccggc acccccguga acgagaugcc caacgccagg   1620
gccuucgugg gccugauuga ccccaaguuc ccccccagcu accccaacgu gacccgggag   1680
cacuacacca gcugcaacaa ccggaagcgg acuagcgugg acaacaacua cgccaagcug   1740
cggagcaugg gcuacgcucu gacaggcgcc gugcagaccc ugucccagau cagcgacauc   1800
aacgacgaga accugcagca gggcaucuac cugcugcggg accacgugau cacccugaug   1860
gaagccaccc ugcacgacau cagcgugaug gaaggcaugu ucgccgugca gcaccugcac   1920
acccaccuga aucaccugaa aaccaugcug cuggaacggc gcaucgacug gaccuacaug   1980
agcagcaccu ggcugcagca gcagcugcag aaaagcgacg acgagaugaa ggugaucaag   2040
cggaucgcca gaucucuggu guacuacgug aagcagaccc acagcagccc caccgccacc   2100
gccugggaga ucggccugua cuaugagcug gugaucccca agcacaucua ccugaacaac   2160
uggaaugugg ugaacaucgg ccaccuggug aaaagcgccg gacagcugac ccacgugacc   2220
aucgcccacc ccuacgagau caucaacaaa gaaugcgugg agaccaucua ucugcaccug   2280
gaagauugca cccggcagga cuacgugauc ugcgacgugg ugaagaucgu gcagcccugc   2340
ggcaacagca gcgacaccag cgacugcccc gugugggccg aggccgugaa agaacccuuc   2400
gugcagguga acccccugaa gaacggcucc uaccuggugc uggccagcag caccgacugc   2460
cagauccccc ccuacgugcc cagcaucgug accgugaaug agaccaccuc cugcuucggc   2520
cuggacuuca agcggccccu gguggccgag gaaagacuga gcuucgagcc ccggcugccc   2580
aaccugcagc ugaggcugcc ccaccuggug ggcaucaucg ccaagaucaa gggcaucaag   2640
aucgagguga ccagcagcgg cgagagcauc aaagaacaga ucgagcgggc caaggccgag   2700
cugcugcggc uggauaucca cgagggcgac acacccgccu ggauccagca gcuggccgcc   2760
gccaccaagg acguguggcc cgcugcagcc agcgcccugc agggcaucgg caacuuucug   2820
agcggcaccg cccagggcau cuucggcacc gccuucuccc ugcugggcua ccugaagccc   2880
auccugaucg gcgugggcgu gauucugcug gugauucuga ucuucaagau cgugagcugg   2940
auccccacca agaaaaagaa ccaguga                                       2967


<210>  42

<211>  988
<212>  PRT
<213>  artificial sequence


<220>
<223>  Description of artificial sequence: Synthetic polypeptide

<220>
<223>  FV_EM20_HCO_Seq

<400>  42
Met Ala Pro Pro Met Thr Leu Gln Gln Trp Ile Ile Trp Lys Lys Met 
1               5                   10                  15      


Asn Lys Ala His Glu Ala Leu Gln Asn Thr Thr Thr Val Thr Glu Gln 
            20                  25                  30          


Gln Lys Glu Gln Ile Ile Leu Asp Ile Gln Asn Glu Glu Val Gln Pro 
        35                  40                  45              


Thr Arg Arg Asp Lys Phe Arg Tyr Leu Leu Tyr Thr Cys Cys Ala Thr 
    50                  55                  60                  


Ser Ser Arg Val Leu Ala Trp Met Phe Leu Val Cys Ile Leu Leu Ile 
65                  70                  75                  80  


Ile Val Leu Val Ser Cys Phe Val Thr Ile Ser Arg Ile Gln Trp Asn 
                85                  90                  95      


Lys Asp Ile Gln Val Leu Gly Pro Val Ile Asp Trp Asn Val Thr Gln 
            100                 105                 110         


Arg Ala Val Tyr Gln Pro Leu Gln Thr Arg Arg Ile Ala Arg Ser Leu 
        115                 120                 125             


Arg Met Gln His Pro Val Pro Lys Tyr Val Glu Val Asn Met Thr Ser 
    130                 135                 140                 


Ile Pro Gln Gly Val Tyr Tyr Glu Pro His Pro Glu Pro Ile Val Val 
145                 150                 155                 160 


Lys Glu Arg Val Leu Gly Leu Ser Gln Ile Leu Met Ile Asn Ser Glu 
                165                 170                 175     


Asn Ile Ala Asn Asn Ala Asn Leu Thr Gln Glu Val Lys Lys Leu Leu 
            180                 185                 190         


Thr Glu Met Val Asn Glu Glu Met Gln Ser Leu Ser Asp Val Met Ile 
        195                 200                 205             


Asp Phe Glu Ile Pro Leu Gly Asp Pro Arg Asp Gln Glu Gln Tyr Ile 
    210                 215                 220                 


His Arg Lys Cys Tyr Gln Glu Phe Ala Asn Cys Tyr Leu Val Lys Tyr 
225                 230                 235                 240 


Lys Glu Pro Lys Pro Trp Pro Lys Glu Gly Leu Ile Ala Asp Gln Cys 
                245                 250                 255     


Pro Leu Pro Gly Tyr His Ala Gly Leu Thr Tyr Asn Arg Gln Ser Ile 
            260                 265                 270         


Trp Asp Tyr Tyr Ile Lys Val Glu Ser Ile Arg Pro Ala Asn Trp Thr 
        275                 280                 285             


Thr Lys Ser Lys Tyr Gly Gln Ala Arg Leu Gly Ser Phe Tyr Ile Pro 
    290                 295                 300                 


Ser Ser Leu Arg Gln Ile Asn Val Ser His Val Leu Phe Cys Ser Asp 
305                 310                 315                 320 


Gln Leu Tyr Ser Lys Trp Tyr Asn Ile Glu Asn Thr Ile Glu Gln Asn 
                325                 330                 335     


Glu Arg Phe Leu Leu Asn Lys Leu Asn Asn Leu Thr Ser Gly Thr Ser 
            340                 345                 350         


Val Leu Lys Lys Arg Ala Leu Pro Lys Asp Trp Ser Ser Gln Gly Lys 
        355                 360                 365             


Asn Ala Leu Phe Arg Glu Ile Asn Val Leu Asp Ile Cys Ser Lys Pro 
    370                 375                 380                 


Glu Ser Val Ile Leu Leu Asn Thr Ser Tyr Tyr Ser Phe Ser Leu Trp 
385                 390                 395                 400 


Glu Gly Asp Cys Asn Phe Thr Lys Asp Met Ile Ser Gln Leu Val Pro 
                405                 410                 415     


Glu Cys Asp Gly Phe Tyr Asn Asn Ser Lys Trp Met His Met His Pro 
            420                 425                 430         


Tyr Ala Cys Arg Phe Trp Arg Ser Lys Asn Glu Lys Glu Glu Thr Lys 
        435                 440                 445             


Cys Arg Asp Gly Glu Thr Lys Arg Cys Leu Tyr Tyr Pro Leu Trp Asp 
    450                 455                 460                 


Ser Pro Glu Ser Thr Tyr Asp Phe Gly Tyr Leu Ala Tyr Gln Lys Asn 
465                 470                 475                 480 


Phe Pro Ser Pro Ile Cys Ile Glu Gln Gln Lys Ile Arg Asp Gln Asp 
                485                 490                 495     


Tyr Glu Val Tyr Ser Leu Tyr Gln Glu Cys Lys Ile Ala Ser Lys Ala 
            500                 505                 510         


Tyr Gly Ile Asp Thr Val Leu Phe Ser Leu Lys Asn Phe Leu Asn Tyr 
        515                 520                 525             


Thr Gly Thr Pro Val Asn Glu Met Pro Asn Ala Arg Ala Phe Val Gly 
    530                 535                 540                 


Leu Ile Asp Pro Lys Phe Pro Pro Ser Tyr Pro Asn Val Thr Arg Glu 
545                 550                 555                 560 


His Tyr Thr Ser Cys Asn Asn Arg Lys Arg Thr Ser Val Asp Asn Asn 
                565                 570                 575     


Tyr Ala Lys Leu Arg Ser Met Gly Tyr Ala Leu Thr Gly Ala Val Gln 
            580                 585                 590         


Thr Leu Ser Gln Ile Ser Asp Ile Asn Asp Glu Asn Leu Gln Gln Gly 
        595                 600                 605             


Ile Tyr Leu Leu Arg Asp His Val Ile Thr Leu Met Glu Ala Thr Leu 
    610                 615                 620                 


His Asp Ile Ser Val Met Glu Gly Met Phe Ala Val Gln His Leu His 
625                 630                 635                 640 


Thr His Leu Asn His Leu Lys Thr Met Leu Leu Glu Arg Arg Ile Asp 
                645                 650                 655     


Trp Thr Tyr Met Ser Ser Thr Trp Leu Gln Gln Gln Leu Gln Lys Ser 
            660                 665                 670         


Asp Asp Glu Met Lys Val Ile Lys Arg Ile Ala Arg Ser Leu Val Tyr 
        675                 680                 685             


Tyr Val Lys Gln Thr His Ser Ser Pro Thr Ala Thr Ala Trp Glu Ile 
    690                 695                 700                 


Gly Leu Tyr Tyr Glu Leu Val Ile Pro Lys His Ile Tyr Leu Asn Asn 
705                 710                 715                 720 


Trp Asn Val Val Asn Ile Gly His Leu Val Lys Ser Ala Gly Gln Leu 
                725                 730                 735     


Thr His Val Thr Ile Ala His Pro Tyr Glu Ile Ile Asn Lys Glu Cys 
            740                 745                 750         


Val Glu Thr Ile Tyr Leu His Leu Glu Asp Cys Thr Arg Gln Asp Tyr 
        755                 760                 765             


Val Ile Cys Asp Val Val Lys Ile Val Gln Pro Cys Gly Asn Ser Ser 
    770                 775                 780                 


Asp Thr Ser Asp Cys Pro Val Trp Ala Glu Ala Val Lys Glu Pro Phe 
785                 790                 795                 800 


Val Gln Val Asn Pro Leu Lys Asn Gly Ser Tyr Leu Val Leu Ala Ser 
                805                 810                 815     


Ser Thr Asp Cys Gln Ile Pro Pro Tyr Val Pro Ser Ile Val Thr Val 
            820                 825                 830         


Asn Glu Thr Thr Ser Cys Phe Gly Leu Asp Phe Lys Arg Pro Leu Val 
        835                 840                 845             


Ala Glu Glu Arg Leu Ser Phe Glu Pro Arg Leu Pro Asn Leu Gln Leu 
    850                 855                 860                 


Arg Leu Pro His Leu Val Gly Ile Ile Ala Lys Ile Lys Gly Ile Lys 
865                 870                 875                 880 


Ile Glu Val Thr Ser Ser Gly Glu Ser Ile Lys Glu Gln Ile Glu Arg 
                885                 890                 895     


Ala Lys Ala Glu Leu Leu Arg Leu Asp Ile His Glu Gly Asp Thr Pro 
            900                 905                 910         


Ala Trp Ile Gln Gln Leu Ala Ala Ala Thr Lys Asp Val Trp Pro Ala 
        915                 920                 925             


Ala Ala Ser Ala Leu Gln Gly Ile Gly Asn Phe Leu Ser Gly Thr Ala 
    930                 935                 940                 


Gln Gly Ile Phe Gly Thr Ala Phe Ser Leu Leu Gly Tyr Leu Lys Pro 
945                 950                 955                 960 


Ile Leu Ile Gly Val Gly Val Ile Leu Leu Val Ile Leu Ile Phe Lys 
                965                 970                 975     


Ile Val Ser Trp Ile Pro Thr Lys Lys Lys Asn Gln 
            980                 985             


<210>  43

<211>  3924
<212>  DNA
<213>  artificial sequence

<220>
<223>  Description of artificial sequence: Synthetic polynucleotide

<220>
<223>  FV_Geno_Seq-GFP (3924 bp)

<400>  43
ccatgggagc tcttcactac tcgctgcgtc gagagtgtac gagactctcc aggtttggta     60
agaaatattt tatattgtta taatgttact atgatccatt aacactctgc ttatagattg    120
taagggtgat tgcaatgctt tctgcataaa actttggttt tcttgttaat caataaaccg    180
acttgattcg agaacctact catatattat tgtctctttt atactttatt aagtaaaagg    240
atttgtatat tagccttgct aagggagaca tctagtgata taagtgtgaa ctacacttat    300
cttaaatgat gtaactcctt aggataatca atatacaaaa ttccatgaca attggcgccc    360
aacgtggggc tcgaatataa gtcgggttta tttgtaaatt atccctaggg acctccgagc    420
atagcgggag gcatataaaa gccaatagac actggcttaa ggaagtaatg ttgaagaata    480
tgaacttgat gttgaagctc tggttgtaat tttaagagat agaaatatac caagaaatcc    540
tttacatgga gaagttatag gtcttcgcct tactgaagga tggtggggac aaattgagag    600
atttcagatg gtacgtctaa tattacaaga tgatgataat gaacctttac agagacctta    660
attaaggcta tggatttggc cttgggacaa gaaatattag tttatagtcc cattgtatct    720
atgactaaaa tacaaaaaac tccactacca gaaagaaaag ctttacccat tagatggata    780
acatggatga cttatttaga agatccaaga atccaatttc attatgataa aaccttacca    840
gaacttaagc atattccaga tgtatataca tctagtcagt ctcctgttaa acatccttct    900
caatatgaag gagtgtttta tactgatggc tcggccatca aaagtcctga tcctacaaaa    960
agcaataatg ctggcatggg aatagtacat gccacataca aacctgaata tcaagttttg   1020
aatcaatggt caataccact aggtaatcat actgctcaga tggctgaaat agctgcagtt   1080
gaatttgcct gtaaaaaagc tttaaaaata cctggtcctg tattagttat aactgatagt   1140
ttctatgtag cagaaagtgc taataaagaa ttaccatact ggaaatctaa tgggtttgtt   1200
aataataaga aaaagcctct taaacatatc tccaaatgga aatctattgc tgagtgttta   1260
tctatgaaac cagacattac tattcaacat gaaaaaggca tcagcctaca aataccagta   1320
ttcatactga aaggcaatgc cctagcagat aagcttgcca cccaaggaag ttatgtggtt   1380
aattgtaata ccaaaaaacc aaacctggat gcagagttgg atcaattatt acagggtcat   1440
tatataaaag gattattgga cctttgccac cttcacaggg atacctatat gtattagtag   1500
ttgttgatgg aatgacagga ttcacttggt tataccccac taaggctcct tctactagcg   1560
caactgttaa atctctcaat gtactcacta gtattgcaat tccaaaggtg attcactctg   1620
atcaaggtgc agcattcact tcttcaacct ttgctgaatg ggcaaaggaa agaggtatac   1680
atttggaatt cagtactcct tatcaccccc aaagtggtag taaggtggaa aggaaaaata   1740
gtgatataaa acgactttta actaaactgc tagtaggaag acccacaaag tggtatgacc   1800
tattgcctgt tgtacaactt gctttaaaca acacctatag ccctgtatta aaatatactc   1860
cacatcaact cttatttggt atagattcaa atactccatt tgcaaatcaa gatacacttg   1920
acttgaccag agaagaagaa ctttctcttt tacaggaaat tcgtacttct ttataccatc   1980
catccacccc tccagcctcc tctcgttcct ggtctcctgt tgttggccaa ttggtccagg   2040
agagggtggc taggcctgct tctttgagac ctcgttggca taaaccgtct actgtactta   2100
agagtcgacc tagctgcagt aacgccattt tgcaaggcat ggaaaaatac caaaccaaga   2160
atagagaagt tcagatcaag ggcgggtaca tgaaaatagc taacgttggg ccaaacagga   2220
tatctgcggt gagcagtttc ggccccggcc cggggccaag aacagatggt caccgcagtt   2280
tcggccccgg cccgaggcca agaacagatg gtccccagat atggcccaac cctcagcagt   2340
ttcttaagac ccatcagatg tttccaggct cccccaagga cctgaaatga ccctgcgcct   2400
tatttgaatt aaccaatcag cctgcttctc gcttctgttc gcgcgcttct gcttcccgag   2460
ctctataaaa gagctcacaa cccctcactc ggcgcgccag tcctccgaca gactgagtct   2520
acgtagccac gatggtgagc aagggcgagg agctgttcac cggggtggtg cccatcctgg   2580
tcgagctgga cggcgacgta aacggccaca agttcagcgt gtccggcgag ggcgagggcg   2640
atgccaccta cggcaagctg accctgaagt tcatctgcac caccggcaag ctgcccgtgc   2700
cctggcccac cctcgtgacc accctgacct acggcgtgca gtgcttcagc cgctaccccg   2760
accacatgaa gcagcacgac ttcttcaagt ccgccatgcc cgaaggctac gtccaggagc   2820
gcaccatctt cttcaaggac gacggcaact acaagacccg cgccgaggtg aagttcgagg   2880
gcgacaccct ggtgaaccgc atcgagctga agggcatcga cttcaaggag gacggcaaca   2940
tcctggggca caagctggag tacaactaca acagccacaa cgtctatatc atggccgaca   3000
agcagaagaa cggcatcaag gtgaacttca agatccgcca caacatcgag gacggcagcg   3060
tgcagctcgc cgaccactac cagcagaaca cccccatcgg cgacggcccc gtgctgctgc   3120
ccgacaacca ctacctgagc acccagtccg ccctgagcaa agaccccaac gagaagcgcg   3180
atcacatggt cctgctggag ttcgtgaccg ccgccgggat cactctcggc atggacgagc   3240
tgtacaagta agctagctgg cagcctcgac tgtgccttct agttgccagc catctgttgt   3300
ttgcccctcc cccgtgcctt ccttgaccct ggaaggtgcc actcccactg tcctttccta   3360
ataaaatgag gaaattgcat cgcattgtct gagtaggtgt cattctattc tggggggtgg   3420
ggtggggcag gacagcaagg gggaggattg ggaagacaat agcaggcatg ctggggatgc   3480
ggtgggctct atggacgcgt tgtggtggaa tgccactaga aactagggaa aactaggagg   3540
agagtattac agggaaggaa gtgaagaacc tcgtgaccca aatactcctg ctcctcatag   3600
acgtacctgg gatgagagac acaaggttct taaattgtcc tcattcgcta ctccctctga   3660
catccaacgc tgggctacta aagcattgcc ttatggctgg aaagtggtca cttgtacggg   3720
agctcttcac tactcgctgc gtcgagagtg tacgagactc tccaggtttg gtaagaaata   3780
ttttatattg ttataatgtt actatgatcc attaacactc tgcttataga ttgtaagggt   3840
gattgcaatg ctttctgcat aaaactttgg ttttcttgtt aatcaataaa ccgacttgat   3900
tcgagaacct accagctgct cgag                                          3924


<210>  44

<211>  3918
<212>  RNA
<213>  artificial sequence

<220>
<223>  Description of artificial sequence: Synthetic polynucleotide

<220>
<223>  FV_Geno_Seq-GFP (3924 bp)

<400>  44
gagcucuuca cuacucgcug cgucgagagu guacgagacu cuccagguuu gguaagaaau     60
auuuuauauu guuauaaugu uacuaugauc cauuaacacu cugcuuauag auuguaaggg    120
ugauugcaau gcuuucugca uaaaacuuug guuuucuugu uaaucaauaa accgacuuga    180
uucgagaacc uacucauaua uuauugucuc uuuuauacuu uauuaaguaa aaggauuugu    240
auauuagccu ugcuaaggga gacaucuagu gauauaagug ugaacuacac uuaucuuaaa    300
ugauguaacu ccuuaggaua aucaauauac aaaauuccau gacaauuggc gcccaacgug    360
gggcucgaau auaagucggg uuuauuugua aauuaucccu agggaccucc gagcauagcg    420
ggaggcauau aaaagccaau agacacuggc uuaaggaagu aauguugaag aauaugaacu    480
ugauguugaa gcucugguug uaauuuuaag agauagaaau auaccaagaa auccuuuaca    540
uggagaaguu auaggucuuc gccuuacuga aggauggugg ggacaaauug agagauuuca    600
gaugguacgu cuaauauuac aagaugauga uaaugaaccu uuacagagac cuuaauuaag    660
gcuauggauu uggccuuggg acaagaaaua uuaguuuaua gucccauugu aucuaugacu    720
aaaauacaaa aaacuccacu accagaaaga aaagcuuuac ccauuagaug gauaacaugg    780
augacuuauu uagaagaucc aagaauccaa uuucauuaug auaaaaccuu accagaacuu    840
aagcauauuc cagauguaua uacaucuagu cagucuccug uuaaacaucc uucucaauau    900
gaaggagugu uuuauacuga uggcucggcc aucaaaaguc cugauccuac aaaaagcaau    960
aaugcuggca ugggaauagu acaugccaca uacaaaccug aauaucaagu uuugaaucaa   1020
uggucaauac cacuagguaa ucauacugcu cagauggcug aaauagcugc aguugaauuu   1080
gccuguaaaa aagcuuuaaa aauaccuggu ccuguauuag uuauaacuga uaguuucuau   1140
guagcagaaa gugcuaauaa agaauuacca uacuggaaau cuaauggguu uguuaauaau   1200
aagaaaaagc cucuuaaaca uaucuccaaa uggaaaucua uugcugagug uuuaucuaug   1260
aaaccagaca uuacuauuca acaugaaaaa ggcaucagcc uacaaauacc aguauucaua   1320
cugaaaggca augcccuagc agauaagcuu gccacccaag gaaguuaugu gguuaauugu   1380
aauaccaaaa aaccaaaccu ggaugcagag uuggaucaau uauuacaggg ucauuauaua   1440
aaaggauuau uggaccuuug ccaccuucac agggauaccu auauguauua guaguuguug   1500
auggaaugac aggauucacu ugguuauacc ccacuaaggc uccuucuacu agcgcaacug   1560
uuaaaucucu caauguacuc acuaguauug caauuccaaa ggugauucac ucugaucaag   1620
gugcagcauu cacuucuuca accuuugcug aaugggcaaa ggaaagaggu auacauuugg   1680
aauucaguac uccuuaucac ccccaaagug guaguaaggu ggaaaggaaa aauagugaua   1740
uaaaacgacu uuuaacuaaa cugcuaguag gaagacccac aaagugguau gaccuauugc   1800
cuguuguaca acuugcuuua aacaacaccu auagcccugu auuaaaauau acuccacauc   1860
aacucuuauu ugguauagau ucaaauacuc cauuugcaaa ucaagauaca cuugacuuga   1920
ccagagaaga agaacuuucu cuuuuacagg aaauucguac uucuuuauac cauccaucca   1980
ccccuccagc cuccucucgu uccuggucuc cuguuguugg ccaauugguc caggagaggg   2040
uggcuaggcc ugcuucuuug agaccucguu ggcauaaacc gucuacugua cuuaagaguc   2100
gaccuagcug caguaacgcc auuuugcaag gcauggaaaa auaccaaacc aagaauagag   2160
aaguucagau caagggcggg uacaugaaaa uagcuaacgu ugggccaaac aggauaucug   2220
cggugagcag uuucggcccc ggcccggggc caagaacaga uggucaccgc aguuucggcc   2280
ccggcccgag gccaagaaca gauggucccc agauauggcc caacccucag caguuucuua   2340
agacccauca gauguuucca ggcuccccca aggaccugaa augacccugc gccuuauuug   2400
aauuaaccaa ucagccugcu ucucgcuucu guucgcgcgc uucugcuucc cgagcucuau   2460
aaaagagcuc acaaccccuc acucggcgcg ccaguccucc gacagacuga gucuacguag   2520
ccacgauggu gagcaagggc gaggagcugu ucaccggggu ggugcccauc cuggucgagc   2580
uggacggcga cguaaacggc cacaaguuca gcguguccgg cgagggcgag ggcgaugcca   2640
ccuacggcaa gcugacccug aaguucaucu gcaccaccgg caagcugccc gugcccuggc   2700
ccacccucgu gaccacccug accuacggcg ugcagugcuu cagccgcuac cccgaccaca   2760
ugaagcagca cgacuucuuc aaguccgcca ugcccgaagg cuacguccag gagcgcacca   2820
ucuucuucaa ggacgacggc aacuacaaga cccgcgccga ggugaaguuc gagggcgaca   2880
cccuggugaa ccgcaucgag cugaagggca ucgacuucaa ggaggacggc aacauccugg   2940
ggcacaagcu ggaguacaac uacaacagcc acaacgucua uaucauggcc gacaagcaga   3000
agaacggcau caaggugaac uucaagaucc gccacaacau cgaggacggc agcgugcagc   3060
ucgccgacca cuaccagcag aacaccccca ucggcgacgg ccccgugcug cugcccgaca   3120
accacuaccu gagcacccag uccgcccuga gcaaagaccc caacgagaag cgcgaucaca   3180
ugguccugcu ggaguucgug accgccgccg ggaucacucu cggcauggac gagcuguaca   3240
aguaagcuag cuggcagccu cgacugugcc uucuaguugc cagccaucug uuguuugccc   3300
cucccccgug ccuuccuuga cccuggaagg ugccacuccc acuguccuuu ccuaauaaaa   3360
ugaggaaauu gcaucgcauu gucugaguag gugucauucu auucuggggg gugggguggg   3420
gcaggacagc aagggggagg auugggaaga caauagcagg caugcugggg augcgguggg   3480
cucuauggac gcguuguggu ggaaugccac uagaaacuag ggaaaacuag gaggagagua   3540
uuacagggaa ggaagugaag aaccucguga cccaaauacu ccugcuccuc auagacguac   3600
cugggaugag agacacaagg uucuuaaauu guccucauuc gcuacucccu cugacaucca   3660
acgcugggcu acuaaagcau ugccuuaugg cuggaaagug gucacuugua cgggagcucu   3720
ucacuacucg cugcgucgag aguguacgag acucuccagg uuugguaaga aauauuuuau   3780
auuguuauaa uguuacuaug auccauuaac acucugcuua uagauuguaa gggugauugc   3840
aaugcuuucu gcauaaaacu uugguuuucu uguuaaucaa uaaaccgacu ugauucgaga   3900
accuaccagc ugcucgag                                                 3918




<210>  45

<211>  239
<212>  PRT
<213>  artificial sequence

<220>
<223>  Description of artificial sequence: Synthetic polypeptide


<220>
<223>  GFP

<400>  45
Met Val Ser Lys Gly Glu Glu Leu Phe Thr Gly Val Val Pro Ile Leu 
1               5                   10                  15      


Val Glu Leu Asp Gly Asp Val Asn Gly His Lys Phe Ser Val Ser Gly 
            20                  25                  30          


Glu Gly Glu Gly Asp Ala Thr Tyr Gly Lys Leu Thr Leu Lys Phe Ile 
        35                  40                  45              


Cys Thr Thr Gly Lys Leu Pro Val Pro Trp Pro Thr Leu Val Thr Thr 
    50                  55                  60                  


Leu Thr Tyr Gly Val Gln Cys Phe Ser Arg Tyr Pro Asp His Met Lys 
65                  70                  75                  80  


Gln His Asp Phe Phe Lys Ser Ala Met Pro Glu Gly Tyr Val Gln Glu 
                85                  90                  95      


Arg Thr Ile Phe Phe Lys Asp Asp Gly Asn Tyr Lys Thr Arg Ala Glu 
            100                 105                 110         


Val Lys Phe Glu Gly Asp Thr Leu Val Asn Arg Ile Glu Leu Lys Gly 
        115                 120                 125             


Ile Asp Phe Lys Glu Asp Gly Asn Ile Leu Gly His Lys Leu Glu Tyr 
    130                 135                 140                 


Asn Tyr Asn Ser His Asn Val Tyr Ile Met Ala Asp Lys Gln Lys Asn 
145                 150                 155                 160 


Gly Ile Lys Val Asn Phe Lys Ile Arg His Asn Ile Glu Asp Gly Ser 
                165                 170                 175     


Val Gln Leu Ala Asp His Tyr Gln Gln Asn Thr Pro Ile Gly Asp Gly 
            180                 185                 190         


Pro Val Leu Leu Pro Asp Asn His Tyr Leu Ser Thr Gln Ser Ala Leu 
        195                 200                 205             


Ser Lys Asp Pro Asn Glu Lys Arg Asp His Met Val Leu Leu Glu Phe 
    210                 215                 220                 


Val Thr Ala Ala Gly Ile Thr Leu Gly Met Asp Glu Leu Tyr Lys 
225                 230                 235                 



<210>  46

<211>  3918
<212>  RNA
<213>  artificial sequence

<220>
<223>  Description of artificial sequence: Synthetic polynucleotide

<220>
<223>  FV_Geno_Seq-GFP v2

<400>  46
gagcucuuca cuacucgcug cgucgagagu guacgagacu cuccagguuu gguaagaaau     60
auuuuauauu guuauaaugu uacuaugauc cauuaacacu cugcuuauag auuguaaggg    120
ugauugcaau gcuuucugca uaaaacuuug guuuucuugu uaaucaauaa accgacuuga    180
uucgagaacc uacucauaua uuauugucuc uuuuauacuu uauuaaguaa aaggauuugu    240
auauuagccu ugcuaaggga gacaucuagu gauauaagug ugaacuacac uuaucuuaaa    300
ugauguaacu ccuuaggaua aucaauauac aaaauuccau gacaauuggc gcccaacgug    360
gggcucgaau auaagucggg uuuauuugua aauuaucccu agggaccucc gagcauagcg    420
ggaggcauau aaaagccaau agacacuggc uuaaggaagu aauguugaag aauaugaacu    480
ugauguugaa gcucugguug uaauuuuaag agauagaaau auaccaagaa auccuuuaca    540
uggagaaguu auaggucuuc gccuuacuga aggauggugg ggacaaauug agagauuuca    600
gaugguacgu cuaauauuac aagaugauga uaaugaaccu uuacagagac cuuaauuaag    660
gcuauggauu uggccuuggg acaagaaaua uuaguuuaua gucccauugu aucuaugacu    720
aaaauacaaa aaacuccacu accagaaaga aaagcuuuac ccauuagaug gauaacaugg    780
augacuuauu uagaagaucc aagaauccaa uuucauuaug auaaaaccuu accagaacuu    840
aagcauauuc cagauguaua uacaucuagu cagucuccug uuaaacaucc uucucaauau    900
gaaggagugu uuuauacuga uggcucggcc aucaaaaguc cugauccuac aaaaagcaau    960
aaugcuggca ugggaauagu acaugccaca uacaaaccug aauaucaagu uuugaaucaa   1020
uggucaauac cacuagguaa ucauacugcu cagauggcug aaauagcugc aguugaauuu   1080
gccuguaaaa aagcuuuaaa aauaccuggu ccuguauuag uuauaacuga uaguuucuau   1140
guagcagaaa gugcuaauaa agaauuacca uacuggaaau cuaauggguu uguuaauaau   1200
aagaaaaagc cucuuaaaca uaucuccaaa uggaaaucua uugcugagug uuuaucuaug   1260
aaaccagaca uuacuauuca acaugaaaaa ggcaucagcc uacaaauacc aguauucaua   1320
cugaaaggca augcccuagc agauaagcuu gccacccaag gaaguuaugu gguuaauugu   1380
aauaccaaaa aaccaaaccu ggaugcagag uuggaucaau uauuacaggg ucauuauaua   1440
aaaggauuau uggaccuuug ccaccuucac agggauaccu auauguauua guaguuguug   1500
auggaaugac aggauucacu ugguuauacc ccacuaaggc uccuucuacu agcgcaacug   1560
uuaaaucucu caauguacuc acuaguauug caauuccaaa ggugauucac ucugaucaag   1620
gugcagcauu cacuucuuca accuuugcug aaugggcaaa ggaaagaggu auacauuugg   1680
aauucaguac uccuuaucac ccccaaagug guaguaaggu ggaaaggaaa aauagugaua   1740
uaaaacgacu uuuaacuaaa cugcuaguag gaagacccac aaagugguau gaccuauugc   1800
cuguuguaca acuugcuuua aacaacaccu auagcccugu auuaaaauau acuccacauc   1860
aacucuuauu ugguauagau ucaaauacuc cauuugcaaa ucaagauaca cuugacuuga   1920
ccagagaaga agaacuuucu cuuuuacagg aaauucguac uucuuuauac cauccaucca   1980
ccccuccagc cuccucucgu uccuggucuc cuguuguugg ccaauugguc caggagaggg   2040
uggcuaggcc ugcuucuuug agaccucguu ggcauaaacc gucuacugua cuuaagaguc   2100
gaccuagcug caguaacgcc auuuugcaag gcauggaaaa auaccaaacc aagaauagag   2160
aaguucagau caagggcggg uacaugaaaa uagcuaacgu ugggccaaac aggauaucug   2220
cggugagcag uuucggcccc ggcccggggc caagaacaga uggucaccgc aguuucggcc   2280
ccggcccgag gccaagaaca gauggucccc agauauggcc caacccucag caguuucuua   2340
agacccauca gauguuucca ggcuccccca aggaccugaa augacccugc gccuuauuug   2400
aauuaaccaa ucagccugcu ucucgcuucu guucgcgcgc uucugcuucc cgagcucuau   2460
aaaagagcuc acaaccccuc acucggcgcg ccaguccucc gacagacuga gucuacguag   2520
ccacgauggu gagcaagggc gaggagcugu ucaccggggu ggugcccauc cuggucgagc   2580
uggacggcga cguaaacggc cacaaguuca gcguguccgg cgagggcgag ggcgaugcca   2640
ccuacggcaa gcugacccug aaguucaucu gcaccaccgg caagcugccc gugcccuggc   2700
ccacccucgu gaccacccug accuacggcg ugcagugcuu cagccgcuac cccgaccaca   2760
ugaagcagca cgacuucuuc aaguccgcca ugcccgaagg cuacguccag gagcgcacca   2820
ucuucuucaa ggacgacggc aacuacaaga cccgcgccga ggugaaguuc gagggcgaca   2880
cccuggugaa ccgcaucgag cugaagggca ucgacuucaa ggaggacggc aacauccugg   2940
ggcacaagcu ggaguacaac uacaacagcc acaacgucua uaucauggcc gacaagcaga   3000
agaacggcau caaggugaac uucaagaucc gccacaacau cgaggacggc agcgugcagc   3060
ucgccgacca cuaccagcag aacaccccca ucggcgacgg ccccgugcug cugcccgaca   3120
accacuaccu gagcacccag uccgcccuga gcaaagaccc caacgagaag cgcgaucaca   3180
ugguccugcu ggaguucgug accgccgccg ggaucacucu cggcauggac gagcuguaca   3240
aguaagcuag cuggcagccu cgacugugcc uucuaguugc cagccaucug uuguuugccc   3300
cucccccgug ccuuccuuga cccuggaagg ugccacuccc acuguccuuu ccuaauaaaa   3360
ugaggaaauu gcaucgcauu gucugaguag gugucauucu auucuggggg gugggguggg   3420
gcaggacagc aagggggagg auugggaaga caauagcagg caugcugggg augcgguggg   3480
cucuauggac gcguuguggu ggaaugccac uagaaacuag ggaaaacuag gaggagagua   3540
uuacagggaa ggaagugaag aaccucguga cccaaauacu ccugcuccuc auagacguac   3600
cugggaugag agacacaagg uucuuaaauu guccucauuc gcuacucccu cugacaucca   3660
acgcugggcu acuaaagcau ugccuuaugg cuggaaagug gucacuugua cgggagcucu   3720
ucacuacucg cugcgucgag aguguacgag acucuccagg uuugguaaga aauauuuuau   3780
auuguuauaa uguuacuaug auccauuaac acucugcuua uagauuguaa gggugauugc   3840
aaugcuuucu gcauaaaacu uugguuuucu uguuaaucaa uaaaccgacu ugauucgaga   3900
accuaccagc ugcucgag                                                 3918




