                         SEQUENCE LISTING

<110>  VERENIUM CORPORATION
 
<120>  Phytase

<130>  VEREN.070WO/D2500-2WO

<140>  Filed herewith
<141>  Filed herewith

<150>  US 61/858,496
<151>  2013-07-25

<160>  8     

<170>  PatentIn version 3.5

<210>  1
<211>  1239
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetically generated polynucleotide

<400>  1
atgcagagcg agccggagct gaagctggaa agcgtggtga ttgtcagccg tcatggtgtg       60

cgtgctccaa ccaaggctac gcaactgatg caggatgtca ccccagacgc atggccaacc      120

tggccggtaa aactgggtga gctgacaccg cgcggtggtg agctaatcgc ctatctcgga      180

cattactggc gtcagcgtct ggtagccgac ggattgctgc ctaaagaagg ctgcccgcag      240

tctggtcagg tcgcgattat tgctgatgtc gacgagcgta cccgtaaaac aggcgaagcc      300

ttcgccgccg ggctggcacc tgactgtgca ataaccgtac atcatcaggc agatacgtcc      360

agtcccgatc cgttatttaa tcctctaaaa actggcgttt gccaactgga tgtcgcgaac      420

gtgagacggg cgatcctcag aagggcagga gggtcaattg ctgactttac ccggcattat      480

caaacggcgt ttcgcgaact ggaacgggtg cttaattttc cgcaatcaaa cttgtgcctt      540

aaacgtgaga aacaggacga aagctgttca ttaacgcagg cattaccatc ggaactcaag      600

gtgagcgccg acgatgtctc attaaccggt gcggttagcc tcgcatcaat gctgacggag      660

atatttctcc tgcaacaagc acagggaatg ccggagccgg ggtggggaag gatcaccgat      720

tcacaccagt ggaacacctt gctaagtttg cataacgcgg tgtttgattt gctacaacgc      780

acgccagagg ttgcccgcag ccgcgccacc ccgttattag atttgatcaa gacagcgttg      840

acgccccatc caccgcaaaa acaggcgtat ggtgtgacat tacccacttc agtgctgttt      900

atcgccggac acgatactaa tctggcaaat ctcggcggcg cactggagct caactggacg      960

cttcccggtc agccggataa ctatccgcca ggtggtgaac tggtgtttga acgctggcgt     1020

cggctaagcg ataacagcca gtggattcag gtttcgctgg tcttccagac tttacagcag     1080

atgcgtgata aaacgccgct gtcattaaat acgccgcccg gagaggtgaa actgaccctg     1140

gcaggatgtg aagagcgaaa tgcgcagggc atgtgttcgt tggcaggttt tacgcaaatc     1200

gtgaatgaag cacgcatacc ggcgtgcagt ttgtgatga                            1239


<210>  2
<211>  1230
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetically generated polynucleotide

<400>  2
cagagtgagc cggagctgaa gctggaaagt gtggtgattg tcagtcgtca tggtgtgcgt       60

gctccaacca aggctacgca actgatgcag gatgtcaccc cagacgcatg gccaacctgg      120

ccggtaaaac tgggtgagct gacaccgcgc ggtggtgagc taatcgccta tctcggacat      180

tactggcgtc agcgtctggt agccgacgga ttgctgccta aagaaggctg cccgcagtct      240

ggtcaggtcg cgattattgc tgatgtcgac gagcgtaccc gtaaaacagg cgaagccttc      300

gccgccgggc tggcacctga ctgtgcaata accgtacatc atcaggcaga tacgtccagt      360

cccgatccgt tatttaatcc tctaaaaact ggcgtttgcc aactggatgt cgcgaacgtg      420

agacgggcga tcctcagaag ggcaggaggg tcaattgctg actttacccg gcattatcaa      480

acggcgtttc gcgaactgga acgggtgctt aattttccgc aatcaaactt gtgccttaaa      540

cgtgagaaac aggacgaaag ctgttcatta acgcaggcat taccatcgga actcaaggtg      600

agcgccgacg atgtctcatt aaccggtgcg gttagcctcg catcaatgct gacggagata      660

tttctcctgc aacaagcaca gggaatgccg gagccggggt ggggaaggat caccgattca      720

caccagtgga acaccttgct aagtttgcat aacgcggtgt ttgatttgct acaacgcacg      780

ccagaggttg cccgcagccg cgccaccccg ttattagatt tgatcaagac agcgttgacg      840

ccccatccac cgcaaaaaca ggcgtatggt gtgacattac ccacttcagt gctgtttatc      900

gccggacacg atactaatct ggcaaatctc ggcggcgcac tggagctcaa ctggacgctt      960

cccggtcagc cggataacta tccgccaggt ggtgaactgg tgtttgaacg ctggcgtcgg     1020

ctaagcgata acagccagtg gattcaggtt tcgctggtct tccagacttt acagcagatg     1080

cgtgataaaa cgccgctgtc attaaatacg ccgcccggag aggtgaaact gaccctggca     1140

ggatgtgaag agcgaaatgc gcagggcatg tgttcgttgg caggttttac gcaaatcgtg     1200

aatgaagcac gcataccggc gtgcagtttg                                      1230


<210>  3
<211>  411
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetically generated polypeptide

<400>  3

Met Gln Ser Glu Pro Glu Leu Lys Leu Glu Ser Val Val Ile Val Ser 
1               5                   10                  15      


Arg His Gly Val Arg Ala Pro Thr Lys Ala Thr Gln Leu Met Gln Asp 
            20                  25                  30          


Val Thr Pro Asp Ala Trp Pro Thr Trp Pro Val Lys Leu Gly Glu Leu 
        35                  40                  45              


Thr Pro Arg Gly Gly Glu Leu Ile Ala Tyr Leu Gly His Tyr Trp Arg 
    50                  55                  60                  


Gln Arg Leu Val Ala Asp Gly Leu Leu Pro Lys Glu Gly Cys Pro Gln 
65                  70                  75                  80  


Ser Gly Gln Val Ala Ile Ile Ala Asp Val Asp Glu Arg Thr Arg Lys 
                85                  90                  95      


Thr Gly Glu Ala Phe Ala Ala Gly Leu Ala Pro Asp Cys Ala Ile Thr 
            100                 105                 110         


Val His His Gln Ala Asp Thr Ser Ser Pro Asp Pro Leu Phe Asn Pro 
        115                 120                 125             


Leu Lys Thr Gly Val Cys Gln Leu Asp Val Ala Asn Val Arg Arg Ala 
    130                 135                 140                 


Ile Leu Arg Arg Ala Gly Gly Ser Ile Ala Asp Phe Thr Arg His Tyr 
145                 150                 155                 160 


Gln Thr Ala Phe Arg Glu Leu Glu Arg Val Leu Asn Phe Pro Gln Ser 
                165                 170                 175     


Asn Leu Cys Leu Lys Arg Glu Lys Gln Asp Glu Ser Cys Ser Leu Thr 
            180                 185                 190         


Gln Ala Leu Pro Ser Glu Leu Lys Val Ser Ala Asp Asp Val Ser Leu 
        195                 200                 205             


Thr Gly Ala Val Ser Leu Ala Ser Met Leu Thr Glu Ile Phe Leu Leu 
    210                 215                 220                 


Gln Gln Ala Gln Gly Met Pro Glu Pro Gly Trp Gly Arg Ile Thr Asp 
225                 230                 235                 240 


Ser His Gln Trp Asn Thr Leu Leu Ser Leu His Asn Ala Val Phe Asp 
                245                 250                 255     


Leu Leu Gln Arg Thr Pro Glu Val Ala Arg Ser Arg Ala Thr Pro Leu 
            260                 265                 270         


Leu Asp Leu Ile Lys Thr Ala Leu Thr Pro His Pro Pro Gln Lys Gln 
        275                 280                 285             


Ala Tyr Gly Val Thr Leu Pro Thr Ser Val Leu Phe Ile Ala Gly His 
    290                 295                 300                 


Asp Thr Asn Leu Ala Asn Leu Gly Gly Ala Leu Glu Leu Asn Trp Thr 
305                 310                 315                 320 


Leu Pro Gly Gln Pro Asp Asn Tyr Pro Pro Gly Gly Glu Leu Val Phe 
                325                 330                 335     


Glu Arg Trp Arg Arg Leu Ser Asp Asn Ser Gln Trp Ile Gln Val Ser 
            340                 345                 350         


Leu Val Phe Gln Thr Leu Gln Gln Met Arg Asp Lys Thr Pro Leu Ser 
        355                 360                 365             


Leu Asn Thr Pro Pro Gly Glu Val Lys Leu Thr Leu Ala Gly Cys Glu 
    370                 375                 380                 


Glu Arg Asn Ala Gln Gly Met Cys Ser Leu Ala Gly Phe Thr Gln Ile 
385                 390                 395                 400 


Val Asn Glu Ala Arg Ile Pro Ala Cys Ser Leu 
                405                 410     


<210>  4
<211>  1266
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetically generated polynucleotide

<400>  4
atgcagagcg agccggagct gaagctggaa agcgtggtga ttgtcagtcg tcatggtgtg       60

cgtgctccaa ccaaggctac gcaactgatg caggatgtca ccccagacgc atggccaacc      120

tggccggtaa aactgggtga gctgacaccg cgcggtggtg agctaatcgc ctatctcgga      180

cattactggc gtcagcgtct ggtagccgac ggattgctgc ctaaagaagg ctgcccgcag      240

tctggtcagg tcgcgattat tgctgatgtc gacgagcgta cccgtaaaac aggcgaagcc      300

ttcgccgccg ggctggcacc tgactgtgca ataaccgtac atcatcaggc agatacgtcc      360

agtcccgatc cgttatttaa tcctctaaaa actggcgttt gccaactgga tgtcgcgaac      420

gtgactcggg cgatcctcag aagggcagga gggtcaattg ctgactttac ccggcattat      480

caaacggcgt ttcgcgaact ggaacgggtg cttaattttc cgcaatcaaa cttgtgcctt      540

aaacgtgaga aacaggacga aagctgttca ttaacgcagg cattaccatc ggaactcaag      600

gtgagcgccg acgatgtctc attaaccggt gcggttagcc tcgcatcaat gctgacggag      660

atatttctcc tgcaacaagc acagggaatg ccggagccgg ggtggggaag gatcaccgat      720

tcacaccagt ggaacacctt gctaagtttg cataacgcgg tgtttgattt gctacaacgc      780

acgccagagg ttgcccgcag ccgcgccacc ccgttattag atttgatcaa gacagcgttg      840

acgccccatc caccgcaaaa acaggcgtat ggtgtgacat tacccacttc agtgctgttt      900

atcgccggac acgatactaa tctggcaaat ctcggcggcg cactggagct caactggacg      960

cttcccggtc agccggataa ctatccgcca ggtggtgaac tggtgtttga acgctggcgt     1020

cggctaagcg ataacagcca gtggattcag gtttcgctgg tcttccagac tttacagcag     1080

atgcgtgata aaacgccgct gtcattaaat acgccgcccg gagaggtgaa actgaccctg     1140

gcaggatgtg aagagcgaaa tgcgcagggc atgtgttcgt tggcaggttt tacgcaaatc     1200

gtgaatgaag cacgcatacc ggcgtgcagt ttgtgatgac tcgagcccaa aacgaaaggc     1260

tcagtc                                                                1266


<210>  5
<211>  1230
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetically generated polynucleotide

<400>  5
cagagtgagc cggagctgaa gctggaaagt gtggtgattg tcagtcgtca tggtgtgcgt       60

gctccaacca aggctacgca actgatgcag gatgtcaccc cagacgcatg gccaacctgg      120

ccggtaaaac tgggtgagct gacaccgcgc ggtggtgagc taatcgccta tctcggacat      180

tactggcgtc agcgtctggt agccgacgga ttgctgccta aagaaggctg cccgcagtct      240

ggtcaggtcg cgattattgc tgatgtcgac gagcgtaccc gtaaaacagg cgaagccttc      300

gccgccgggc tggcacctga ctgtgcaata accgtacatc atcaggcaga tacgtccagt      360

cccgatccgt tatttaatcc tctaaaaact ggcgtttgcc aactggatgt cgcgaacgtg      420

actcgggcga tcctcagaag ggcaggaggg tcaattgctg actttacccg gcattatcaa      480

acggcgtttc gcgaactgga acgggtgctt aattttccgc aatcaaactt gtgccttaaa      540

cgtgagaaac aggacgaaag ctgttcatta acgcaggcat taccatcgga actcaaggtg      600

agcgccgacg atgtctcatt aaccggtgcg gttagcctcg catcaatgct gacggagata      660

tttctcctgc aacaagcaca gggaatgccg gagccggggt ggggaaggat caccgattca      720

caccagtgga acaccttgct aagtttgcat aacgcggtgt ttgatttgct acaacgcacg      780

ccagaggttg cccgcagccg cgccaccccg ttattagatt tgatcaagac agcgttgacg      840

ccccatccac cgcaaaaaca ggcgtatggt gtgacattac ccacttcagt gctgtttatc      900

gccggacacg atactaatct ggcaaatctc ggcggcgcac tggagctcaa ctggacgctt      960

cccggtcagc cggataacta tccgccaggt ggtgaactgg tgtttgaacg ctggcgtcgg     1020

ctaagcgata acagccagtg gattcaggtt tcgctggtct tccagacttt acagcagatg     1080

cgtgataaaa cgccgctgtc attaaatacg ccgcccggag aggtgaaact gaccctggca     1140

ggatgtgaag agcgaaatgc gcagggcatg tgttcgttgg caggttttac gcaaatcgtg     1200

aatgaagcac gcataccggc gtgcagtttg                                      1230


<210>  6
<211>  411
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetically generated polypolypeptide

<400>  6

Met Gln Ser Glu Pro Glu Leu Lys Leu Glu Ser Val Val Ile Val Ser 
1               5                   10                  15      


Arg His Gly Val Arg Ala Pro Thr Lys Ala Thr Gln Leu Met Gln Asp 
            20                  25                  30          


Val Thr Pro Asp Ala Trp Pro Thr Trp Pro Val Lys Leu Gly Glu Leu 
        35                  40                  45              


Thr Pro Arg Gly Gly Glu Leu Ile Ala Tyr Leu Gly His Tyr Trp Arg 
    50                  55                  60                  


Gln Arg Leu Val Ala Asp Gly Leu Leu Pro Lys Glu Gly Cys Pro Gln 
65                  70                  75                  80  


Ser Gly Gln Val Ala Ile Ile Ala Asp Val Asp Glu Arg Thr Arg Lys 
                85                  90                  95      


Thr Gly Glu Ala Phe Ala Ala Gly Leu Ala Pro Asp Cys Ala Ile Thr 
            100                 105                 110         


Val His His Gln Ala Asp Thr Ser Ser Pro Asp Pro Leu Phe Asn Pro 
        115                 120                 125             


Leu Lys Thr Gly Val Cys Gln Leu Asp Val Ala Asn Val Thr Arg Ala 
    130                 135                 140                 


Ile Leu Arg Arg Ala Gly Gly Ser Ile Ala Asp Phe Thr Arg His Tyr 
145                 150                 155                 160 


Gln Thr Ala Phe Arg Glu Leu Glu Arg Val Leu Asn Phe Pro Gln Ser 
                165                 170                 175     


Asn Leu Cys Leu Lys Arg Glu Lys Gln Asp Glu Ser Cys Ser Leu Thr 
            180                 185                 190         


Gln Ala Leu Pro Ser Glu Leu Lys Val Ser Ala Asp Asp Val Ser Leu 
        195                 200                 205             


Thr Gly Ala Val Ser Leu Ala Ser Met Leu Thr Glu Ile Phe Leu Leu 
    210                 215                 220                 


Gln Gln Ala Gln Gly Met Pro Glu Pro Gly Trp Gly Arg Ile Thr Asp 
225                 230                 235                 240 


Ser His Gln Trp Asn Thr Leu Leu Ser Leu His Asn Ala Val Phe Asp 
                245                 250                 255     


Leu Leu Gln Arg Thr Pro Glu Val Ala Arg Ser Arg Ala Thr Pro Leu 
            260                 265                 270         


Leu Asp Leu Ile Lys Thr Ala Leu Thr Pro His Pro Pro Gln Lys Gln 
        275                 280                 285             


Ala Tyr Gly Val Thr Leu Pro Thr Ser Val Leu Phe Ile Ala Gly His 
    290                 295                 300                 


Asp Thr Asn Leu Ala Asn Leu Gly Gly Ala Leu Glu Leu Asn Trp Thr 
305                 310                 315                 320 


Leu Pro Gly Gln Pro Asp Asn Tyr Pro Pro Gly Gly Glu Leu Val Phe 
                325                 330                 335     


Glu Arg Trp Arg Arg Leu Ser Asp Asn Ser Gln Trp Ile Gln Val Ser 
            340                 345                 350         


Leu Val Phe Gln Thr Leu Gln Gln Met Arg Asp Lys Thr Pro Leu Ser 
        355                 360                 365             


Leu Asn Thr Pro Pro Gly Glu Val Lys Leu Thr Leu Ala Gly Cys Glu 
    370                 375                 380                 


Glu Arg Asn Ala Gln Gly Met Cys Ser Leu Ala Gly Phe Thr Gln Ile 
385                 390                 395                 400 


Val Asn Glu Ala Arg Ile Pro Ala Cys Ser Leu 
                405                 410     


<210>  7
<211>  1230
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  Synthetically generated polynucleotide

<400>  7
cagagtgagc cggagctgaa gctggaaagt gtggtgattg tcagtcgtca tggtgtgcgt       60

gctccaacca aggccatgca actgatgcag gatgtcaccc cagacgcatg gccaacctgg      120

ccggtaaaac tgggtgagct gacaccgcgc ggtggtgagc taatcgccca tctcggacat      180

tactggcgtc agcgtctggt agccgacgga ttgctgccta aatgtggctg cccgcagtct      240

ggtcaggtcg cgattattgc tgatgtcgac gagcgtaccc gtaaaacagg cgaagccttc      300

gccgccgggc tggcacctga ctgtgcaata accgtacata cccaggcaga tacgtccagt      360

cccgatccgt tatttaatcc tctaaaaact ggcgtttgcc aactggatgt ggcgaacgtg      420

agacgtgcga tcctcgagag ggcaggaggg tcaattgctg actttaccgg gcattatcaa      480

acggcgtttc gcgaactgga acgggtgctt aattttccgc aatcaaactt gtgccttaaa      540

cgtgagaaac aggacgaaag ctgttcatta acgcaggcat taccatcgga actcaaggtg      600

agcgccgact gtgtctcatt aaccggtgcg gtaagcctcg catcaatgct gacggagata      660

tttctcctgc aacatgcaca gggaatgccg gagccggggt ggggaaggat caccgattca      720

caccagtgga acaccttgct aagtttgcat aacgcggtgt ttgatttgct acaacgcacg      780

ccagaggttg cccgcagccg cgccaccccg ttattagatt tgatcaagac agcgttgacg      840

ccccatccac cgcaaaaaca ggcgtatggt gtgacattac ccacttcagt gctgtttatc      900

gccggacacg atactaatct ggcaaatctc ggcggcgcac tggagctcga atggacgctt      960

cccggtcagc cggataacta tccgccaggt ggtgaactgg tgtttgaacg ctggcgtcgg     1020

ctaagcgata acagccagtg gattcaggtt tcgctggtct tccagacttt acagcagatg     1080

cgtgataaaa cgccgctgtc attaaatacg ccgcccggag aggtgaaact gaccctggca     1140

ggatgtgaag agcgaaatgc gcagggcatg tgttcgttgg caggttttac gcaaatcgtg     1200

aatgaagcac gcataccggc gtgcagtttg                                      1230


<210>  8
<211>  411
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  Synthetically generated polypeptide

<400>  8

Met Gln Ser Glu Pro Glu Leu Lys Leu Glu Ser Val Val Ile Val Ser 
1               5                   10                  15      


Arg His Gly Val Arg Ala Pro Thr Lys Ala Met Gln Leu Met Gln Asp 
            20                  25                  30          


Val Thr Pro Asp Ala Trp Pro Thr Trp Pro Val Lys Leu Gly Glu Leu 
        35                  40                  45              


Thr Pro Arg Gly Gly Glu Leu Ile Ala His Leu Gly His Tyr Trp Arg 
    50                  55                  60                  


Gln Arg Leu Val Ala Asp Gly Leu Leu Pro Lys Cys Gly Cys Pro Gln 
65                  70                  75                  80  


Ser Gly Gln Val Ala Ile Ile Ala Asp Val Asp Glu Arg Thr Arg Lys 
                85                  90                  95      


Thr Gly Glu Ala Phe Ala Ala Gly Leu Ala Pro Asp Cys Ala Ile Thr 
            100                 105                 110         


Val His Thr Gln Ala Asp Thr Ser Ser Pro Asp Pro Leu Phe Asn Pro 
        115                 120                 125             


Leu Lys Thr Gly Val Cys Gln Leu Asp Val Ala Asn Val Arg Arg Ala 
    130                 135                 140                 


Ile Leu Glu Arg Ala Gly Gly Ser Ile Ala Asp Phe Thr Gly His Tyr 
145                 150                 155                 160 


Gln Thr Ala Phe Arg Glu Leu Glu Arg Val Leu Asn Phe Pro Gln Ser 
                165                 170                 175     


Asn Leu Cys Leu Lys Arg Glu Lys Gln Asp Glu Ser Cys Ser Leu Thr 
            180                 185                 190         


Gln Ala Leu Pro Ser Glu Leu Lys Val Ser Ala Asp Cys Val Ser Leu 
        195                 200                 205             


Thr Gly Ala Val Ser Leu Ala Ser Met Leu Thr Glu Ile Phe Leu Leu 
    210                 215                 220                 


Gln His Ala Gln Gly Met Pro Glu Pro Gly Trp Gly Arg Ile Thr Asp 
225                 230                 235                 240 


Ser His Gln Trp Asn Thr Leu Leu Ser Leu His Asn Ala Val Phe Asp 
                245                 250                 255     


Leu Leu Gln Arg Thr Pro Glu Val Ala Arg Ser Arg Ala Thr Pro Leu 
            260                 265                 270         


Leu Asp Leu Ile Lys Thr Ala Leu Thr Pro His Pro Pro Gln Lys Gln 
        275                 280                 285             


Ala Tyr Gly Val Thr Leu Pro Thr Ser Val Leu Phe Ile Ala Gly His 
    290                 295                 300                 


Asp Thr Asn Leu Ala Asn Leu Gly Gly Ala Leu Glu Leu Glu Trp Thr 
305                 310                 315                 320 


Leu Pro Gly Gln Pro Asp Asn Tyr Pro Pro Gly Gly Glu Leu Val Phe 
                325                 330                 335     


Glu Arg Trp Arg Arg Leu Ser Asp Asn Ser Gln Trp Ile Gln Val Ser 
            340                 345                 350         


Leu Val Phe Gln Thr Leu Gln Gln Met Arg Asp Lys Thr Pro Leu Ser 
        355                 360                 365             


Leu Asn Thr Pro Pro Gly Glu Val Lys Leu Thr Leu Ala Gly Cys Glu 
    370                 375                 380                 


Glu Arg Asn Ala Gln Gly Met Cys Ser Leu Ala Gly Phe Thr Gln Ile 
385                 390                 395                 400 


Val Asn Glu Ala Arg Ile Pro Ala Cys Ser Leu 
                405                 410     


