                         SEQUENCE LISTING

<110>  Government of the United States, as represented by the 
       Secretary, Department of Health and Human Services
       Johnson, Jeffrey A.
       Heneine, Walid M.
       Lipscomb, Jonathan T.
 
<120>  REAL-TIME PCR POINT MUTATION ASSAYS FOR DETECTING HIV-1 
       RESISTANCE TO ANTIVIRAL DRUGS

<130>  CDC-19552/38

<150>  US 61/829,473
<151>  2013-05-31

<160>  151   

<170>  PatentIn version 3.5

<210>  1
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  1
cctcagatca ctctttggca acg                                               23


<210>  2
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  2
aaagttaaac aatggccatt gacag                                             25


<210>  3
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  3
atccctgcat aaatctgact tgc                                               23


<210>  4
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  4
cctcaaatca ctctttggca gcg                                               23


<210>  5
<211>  27
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  5
aggttaaaca atggccattg acagaag                                           27


<210>  6
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  6
ctgggtaaat ctgacttgcc ca                                                22


<210>  7
<211>  27
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  7
cttctgggaa gttcaattag gaatacc                                           27


<210>  8
<211>  27
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  8
cctggtgtct cattgtttat actaggt                                           27


<210>  9
<211>  35
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  9
tggatgtggg tgatgcatat ttytcarttc cctta                                  35


<210>  10
<211>  31
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  10
catayaatac yccartattt gycataaaaa g                                      31


<210>  11
<211>  27
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  11
cctggtgtct cattgtttat actaggt                                           27


<210>  12
<211>  29
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  12
rtatttgcca taaagaaraa rrayaatac                                         29


<210>  13
<211>  29
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  13
rtatttgcca taaagaaraa rrayaacac                                         29


<210>  14
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  14
gtatggtaaa tgcagtatac ttcct                                             25


<210>  15
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  15
ccartatttg ccataaagaa raarrayagt                                        30


<210>  16
<211>  31
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  16
trtttgccat aaagaaaaaa rayagtamca g                                      31


<210>  17
<211>  28
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  17
ttgccataaa gaaaaaarac agtgacag                                          28


<210>  18
<211>  28
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  18
ttgccataaa gaaaaaarac agyracag                                          28


<210>  19
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  19
gccataaaga aaaaaracrg tracgg                                            26


<210>  20
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  20
gtatggtaaa tgcagtatac ttcct                                             25


<210>  21
<211>  32
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  21
agtatttgcc ataaagaaaa aaracagtam ta                                     32


<210>  22
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  22
tcchgcaggg ttaaaraagg ac                                                22


<210>  23
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  23
tccckcwggg ttaaraaggg ac                                                22


<210>  24
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  24
catcchgcag grttaaaaaa gggc                                              24


<210>  25
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  25
catcccgcag ggttaaaava ggat                                              24


<210>  26
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  26
gtatggtaaa tgcagtatac ttcct                                             25


<210>  27
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  27
catcchgcag grctaaaaaa gaa                                               23


<210>  28
<211>  27
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  28
aaaacaaaay ccagamatgr ttggctg                                           27


<210>  29
<211>  28
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  29
gaaaacaaaa yccaramatr gttgghtg                                          28


<210>  30
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  30
caggatggag ttcataaccc at                                                22


<210>  31
<211>  31
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  31
ttyagaaaac aaaayccaga matgrttatm t                                      31


<210>  32
<211>  34
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  32
taggatctga cttagaaata ggrcagcata garc                                   34


<210>  33
<211>  29
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  33
aaatccaram mtarttatmt rtcagcacg                                         29


<210>  34
<211>  29
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  34
aaatccagam atarttatct rtcagcacg                                         29


<210>  35
<211>  29
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  35
aaayccaram atarttatct rycagcatg                                         29


<210>  36
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  36
caggatggag ttcataaccc at                                                22


<210>  37
<211>  33
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  37
aarcaaaayc caramatart tatctrtcaa tay                                    33


<210>  38
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  38
acatctgtkg argtggggry tcac                                              24


<210>  39
<211>  27
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  39
asaayatctg ttrargtggg grttcac                                           27


<210>  40
<211>  27
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  40
asarcatctg tkgarrtggg grytcta                                           27


<210>  41
<211>  27
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  41
asarcatctg tkgarrtggg grytctt                                           27


<210>  42
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  42
arcatctgtk gargtggggr ytctc                                             25


<210>  43
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  43
arcatctgtk gargtggggr ytctg                                             25


<210>  44
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  44
sarcatctgt kgarrtgggg rytcga                                            26


<210>  45
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  45
cttctgtatg tcattgacag tcc                                               23


<210>  46
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  46
saacatctgt tgargtgggg rytt                                              24


<210>  47
<211>  29
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  47
tggacagtac agcctatart gctgccaga                                         29


<210>  48
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  48
gctytattag ayacaggrgc aggta                                             25


<210>  49
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  49
gctctattmg ayacaggagc wggta                                             25


<210>  50
<211>  27
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  50
tggtacagtt tcaataggac taatggg                                           27


<210>  51
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  51
ctytattmga yacaggrgca ggta                                              24


<210>  52
<211>  39
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  52
taaracagta tgatcagrta cccatagaaa tctgtggac                              39


<210>  53
<211>  27
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  53
ctgycaacrt aattggaaga aatccga                                           27


<210>  54
<211>  27
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  54
ctrccaacat aattggaaga aayccga                                           27


<210>  55
<211>  27
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  55
ctrycaacrt aattggaaga aatccaa                                           27


<210>  56
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  56
cttctgtcaa tggccattgt ttaac                                             25


<210>  57
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  57
cctgycaacr taattggaag aaayct                                            26


<210>  58
<211>  33
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  58
tgtaccagta aaattaaagc caggaatgga tgg                                    33


<210>  59
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  59
cccagtaggr ttaaaraagg ac                                                22


<210>  60
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  60
cccakcrggg ttraaagagg ac                                                22


<210>  61
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  61
cccagcaggr ttaaaavagg at                                                22


<210>  62
<211>  29
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  62
aaaagcatta rtrgaaatyt gtrcaggac                                         29


<210>  63
<211>  32
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  63
aataaaagca ttartrgaaa tytgtrcagc at                                     32


<210>  64
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  64
taaaagcatt artrgaaaty tgtrcakgtc                                        30


<210>  65
<211>  27
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  65
aagcattart rgaaatytgt rcakggc                                           27


<210>  66
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  66
cctaattgaa cttcccagaa gtc                                               23


<210>  67
<211>  35
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  67
ttgggcctga aaatccatac aatactccag tattt                                  35


<210>  68
<211>  39
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  68
tagtagattt cagagaactt aataagagaa ctcaagact                              39


<210>  69
<211>  31
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  69
aatactccar tatttgycat aargaargca a                                      31


<210>  70
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  70
atactccart atttgycata aagaargcga                                        30


<210>  71
<211>  29
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  71
rtatttgcya taaagaaraa rgayagcac                                         29


<210>  72
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  72
gttctctraa atctaytawt tttctccctc                                        30


<210>  73
<211>  29
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  73
ttctctraaa tctaytawtt ttctccccc                                         29


<210>  74
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  74
aacatctgtk gargtggggr ytcac                                             25


<210>  75
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  75
aacatytgtt aargtggggr ytcac                                             25


<210>  76
<211>  34
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  76
tatgaactcc atcctgataa atggacagta carc                                   34


<210>  77
<211>  31
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  77
tatgagctcc atcctgataa atggacagtr c                                      31


<210>  78
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  78
tgycaacrta attggragra aycgga                                            26


<210>  79
<211>  27
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  79
ctrycaacrt aattggaagr aatkgga                                           27


<210>  80
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  80
rycaacrtaa ttggragaga ycgga                                             25


<210>  81
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  81
aatgctttta ttttttcttc tgtcaatggc                                        30


<210>  82
<211>  37
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  82
taaattttcc cattagtcct attgaaactg taccagt                                37


<210>  83
<211>  28
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  83
gracamaaaa tccagaaata gtygcctg                                          28


<210>  84
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  84
acamraaatc cagaaatagt ygcttg                                            26


<210>  85
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  85
caggatggag ttcataaccc at                                                22


<210>  86
<211>  34
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  86
taggatctga tttagaaata gggcaacata grac                                   34


<210>  87
<211>  34
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  87
taggatctga tttagaaata aagcaacata grac                                   34


<210>  88
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  88
aaaayccaga matartyatc trycagcatg                                        30


<210>  89
<211>  31
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  89
maaaayccar amatartyat mtrtcagcac g                                      31


<210>  90
<211>  297
<212>  DNA
<213>  HIV

<400>  90
cctcaggtca ctctttggca acgacccctc gtcacaataa agataggggg gcaactaaag       60

gaagctctat tagatacagg agcagatgat acagtattag aagaaatgag tttgccagga      120

agatggaaac caaaaatgat agggggaatt ggaggtttta tcaaagtaag acagtatgat      180

cagatactca tagaaatctg tggacataaa gctataggta cagtattagt aggacctaca      240

cctgtcaaca taattggaag aaatctgttg actcagattg gttgcacttt aaatttt         297


<210>  91
<211>  1680
<212>  DNA
<213>  HIV

<400>  91
cccattagcc ctattgagac tgtaccagta aaattaaagc caggaatgga tggcccaaaa       60

gttaaacaat ggccattgac agaagaaaaa ataaaagcat tagtagaaat ttgtacagag      120

atggaaaagg aagggaaaat ttcaaaaatt gggcctgaaa atccatacaa tactccagta      180

tttgccataa agaaaaaaga cagtactaaa tggagaaaat tagtagattt cagagaactt      240

aataagagaa ctcaagactt ctgggaagtt caattaggaa taccacatcc cgcagggtta      300

aaaaagaaaa aatcagtaac agtactggat gtgggtgatg catatttttc agttccctta      360

gatgaagact tcaggaagta tactgcattt accataccta gtataaacaa tgagacacca      420

gggattagat atcagtacaa tgtgcttcca cagggatgga aaggatcacc agcaatattc      480

caaagtagca tgacaaaaat cttagagcct tttagaaaac aaaatccaga catagttatc      540

tatcaataca tggatgattt gtatgtagga tctgacttag aaatagggca gcatagaaca      600

aaaatagagg agctgagaca acatctgttg aggtggggac ttaccacacc agacaaaaaa      660

catcagaaag aacctccatt cctttggatg ggttatgaac tccatcctga taaatggaca      720

gtacagccta tagtgctgcc agaaaaagac agctggactg tcaatgacat acagaagtta      780

gtggggaaat tgaattgggc aagtcagatt tacccaggga ttaaagtaag gcaattatgt      840

aaactcctta gaggaaccaa agcactaaca gaagtaatac cactaacaga agaagcagag      900

ctagaactgg cagaaaacag agagattcta aaagaaccag tacatggagt gtattatgac      960

ccatcaaaag acttaatagc agaaatacag aagcaggggc aaggccaatg gacatatcaa     1020

atttatcaag agccatttaa aaatctgaaa acaggaaaat atgcaagaat gaggggtgcc     1080

cacactaatg atgtaaaaca attaacagag gcagtgcaaa aaataaccac agaaagcata     1140

gtaatatggg gaaagactcc taaatttaaa ctgcccatac aaaaggaaac atgggaaaca     1200

tggtggacag agtattggca agccacctgg attcctgagt gggagtttgt taatacccct     1260

cccttagtga aattatggta ccagttagag aaagaaccca tagtaggagc agaaaccttc     1320

tatgtagatg gggcagctaa cagggagact aaattaggaa aagcaggata tgttactaat     1380

agaggaagac aaaaagttgt caccctaact gacacaacaa atcagaagac tgagttacaa     1440

gcaatttatc tagctttgca ggattcggga ttagaagtaa acatagtaac agactcacaa     1500

tatgcattag gaatcattca agcacaacca gatcaaagtg aatcagagtt agtcaatcaa     1560

ataatagagc agttaataaa aaaggaaaag gtctatctgg catgggtacc agcacacaaa     1620

ggaattggag gaaatgaaca agtagataaa ttagtcagtg ctggaatcag gaaagtacta     1680


<210>  92
<211>  297
<212>  DNA
<213>  HIV

<400>  92
cctcaaatca ctctttggca gcgacccctt gtcacaataa aagtaggggg tcagataaag       60

gaggctctct tagatacagg agcagatgat acagtattag aagacataaa tttgccagga      120

aaatggaaac caaaaatgat aggaggaatt ggaggtttta tcaaagtaag acagtatgat      180

caaatactta tagaaatttg tggaaaaaag gctataggta cagtattagt gggacccaca      240

cctgtcaaca taattggaag aaatatgttg actcagcttg gatgcacact aaatttt         297


<210>  93
<211>  963
<212>  DNA
<213>  HIV

<400>  93
ccaattagtc cyattgaaac tgtaccagta aaattaaagc cagggatgga tggcccaaag       60

gtcaaacaat ggccattgac agaagaaaaa ataaaagcat taatagcaat ttgtgaagag      120

atggagaagg aaggaaaaat tacaaaaatt gggcctgaaa atccatataa caccccagta      180

tttgccataa aaaagaagga cagtactaag tggagaaaat tagtagattt cagggaactc      240

aataaaagaa ctcaagactt ttgggaagtt caattaggga taccacaccc agcagggtta      300

aagaaaaaga aatcagtaac agtactggat gtgggggatg catatttttc agttccttta      360

gataaagact tcagaaaata tactgcattc accataccta gtataaacaa tgagacacca      420

gggattagat atcaatataa tgtgcttcca cagggatgga aaggatcacc atcaatattc      480

caaagtagta tgacaaaaat cttagagccc tttagggcac aaaatccaga attggttatt      540

tatcaatata tggatgactt gtatgtagga tccgacttag aaatagggca gcatagagca      600

aaaatagagg agttaagaaa acatctattg aggtggggat ttaccacacc agacaagaaa      660

catcagaaag aacctccatt tctttggatg gggtatgaac tccatcctga caaatggaca      720

gtacagccta taaagctgcc agaaaaggat agctggactg ttaatgatat acagaagtta      780

gtgggaaaac taaactgggc aagtcagatt tacaaaggga ttaaagtaag gcagctgtgt      840

agactcctta ggggagccaa agcactaaca gacatagtac cactgactga agaagcagaa      900

ttagaattgg cagagaacag ggaaattcta aaagaaccag tacatggagt atattatgac      960

tca                                                                    963


<210>  94
<211>  297
<212>  DNA
<213>  HIV

<400>  94
cctcaaatca ctctttggca acgacccctt gtcacagtaa rgataggggg acaactaaag       60

gaagctctat tagatacagg agcagatgat acagtattgg aagaaatgaa tttgccagga      120

aaatggaaac caaaaatgat agggggaatt ggaggcttta tcaaagtaag acagtatgat      180

caaatacttg tagaaatctg tggatataag gctataggta cagtgttagt aggacctaca      240

cctgtcaaca taattggaag aaatttgttg actcagattg gttgcacttt aaatttt         297


<210>  95
<211>  963
<212>  DNA
<213>  HIV

<400>  95
ccaattagtc ctattgaaac tgtaccagta aaattaaagc cagggatgga tggcccaaaa       60

gttaaacaat ggccgttaac agaagaaaaa ataaaagcac taacagaaat ttgtacagaa      120

atggaaaagg aaggaaaaat ttcaagaatt gggcctgaaa atccatacaa tactccaata      180

tttgccataa agaaaaaaga cagtactaar tggagaaaat tagtagattt tagagaactt      240

aataagagaa ctcaagactt ctgggaagtt caactaggaa taccacatcc tgcagggcta      300

aaaaagaaaa aatcagtaac agtactggat gtgggwgatg catatttttc agttccctta      360

tatgaagact ttagaaaata tactgcattc accataccya gtataaataa tgagacacca      420

ggaattagat atcagtacaa tgtgcttcca caaggatgga aaggatcacc ggcaatattt      480

caaagtagca tgacaaaaat cttagaacct tttagaaaac aaaatccaga aatggtgatc      540

tatcaataca tggatgattt gtatgtagga tctgacttag aaatagggca gcatagaata      600

aaaatagagg aattaaggga acacttattg aagtggggat ttaccacacc agacaaaaag      660

catcagaaag aacccccatt tctttggatg ggttatgaac tccatccgga taaatggaca      720

gtacagccta taaaactgcc agaaaaagaa agctggactg tcaatgatat acagaagtta      780

gtgggaaaat taaattgggc aagtcagatt tatccaggaa ttaaagtaag acaattatgc      840

aaatgcatta ggggagccaa agcactgaca gaagtagtac cactgacaga agaagcagaa      900

ttagaactgg cagaaaacag agaaattcta aaagaaccag tacatggagt gtattatgat      960

cca                                                                    963


<210>  96
<211>  32
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  96
aatwaaagca ttartrgaaa tytgtrcwgc at                                     32


<210>  97
<211>  29
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  97
aaaagcatta rtrgaaatyt gtrcaggac                                         29


<210>  98
<211>  28
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  98
acaatactcc artatttgcc ataarcag                                          28


<210>  99
<211>  37
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  99
tcagagaact taataaraga actcaagact tctggga                                37


<210>  100
<211>  29
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  100
agaratttgt acagaratgg aaaaggaag                                         29


<210>  101
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  101
caacatytgt taargtgggg rgatac                                            26


<210>  102
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  102
aaaayccagr aatartyatc trtcagcatg                                        30


<210>  103
<211>  28
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  103
aayccagama tartyatctr tcagcacg                                          28


<210>  104
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  104
aaaayccaga ratartyaty trtcagcatg                                        30


<210>  105
<211>  2954
<212>  DNA
<213>  Simian Immunodeficiency Virus

<400>  105
cccatagcta aagtagagcc tgtaaaagtc gccttaaagc caggaaagga tggaccaaaa       60

ttgaagcagt ggccattatc aaaagaaaag atagttgcat taagagaaat ctgtgaaaag      120

atggaaaagg atggtcagtt ggaggaagct cccccgacca atccatacaa cacccccaca      180

tttgctataa agaaaaagga taagaacaaa tggagaatgc tgatagattt tagggaacta      240

aatagggtca ctcaggactt tacggaagtc caattaggaa taccacaccc tgcaggacta      300

gcaaaaagga aaagaattac agtactggat ataggtgatg catatttctc catacctcta      360

gatgaagaat ttaggcagta cactgccttt actttaccat cagtaaataa tgcagagcca      420

ggaaaacgat acatttataa ggttctgcct cagggatgga aggggtcacc agccatcttc      480

caatacacta tgagacatgt gctagaaccc ttcaggaagg caaatccaga tgtgacctta      540

gtccagtata tggatgacat cttaatagct agtgacagga cagacctgga acatgacagg      600

gtagttttac agtcaaagga actcttgaat agcatagggt tttctacccc agaagagaaa      660

ttccaaaaag atcccccatt tcaatggatg gggtacgaat tgtggccaac aaaatggaag      720

ttgcaaaaga tagagttgcc acaaagagag acctggacag tgaatgatat acagaagtta      780

gtaggagtat taaattgggc agctcaaatt tatccaggta taaaaaccaa acatctctgt      840

aggttaatta gaggaaaaat gactctaaca gaggaagttc agtggactga gatggcagaa      900

gcagaatatg aggaaaataa aataattctc agtcaggaac aagaaggatg ttattaccaa      960

gaaggcaagc cattagaagc cacggtaata aagagtcagg acaatcagtg gtcttataaa     1020

attcaccaag aagacaaaat actgaaagta ggaaaatttg caaagataaa gaatacacat     1080

accaatggag tgagactatt agcacatgta atacagaaaa taggaaagga agcaatagtg     1140

atctggggac aggtcccaaa attccactta ccagttgaga aggatgtatg ggaacagtgg     1200

tggacagact attggcaggt aacctggata ccggaatggg attttatctc aacaccaccg     1260

ctagtaagat tagtcttcaa tctagtgaag gaccctatag agggagaaga aacctattat     1320

acagatggat catgtaataa acagtcaaaa gaagggaaag caggatatat cacagatagg     1380

ggcaaagaca aagtaaaagt gttagaacag actactaatc aacaagcaga attggaagca     1440

tttctcatgg cattgacaga ctcagggcca aaggcaaata ttatagtaga ttcacaatat     1500

gttatgggaa taataacagg atgccctaca gaatcagaga gcaggctagt taatcaaata     1560

atagaagaaa tgattaaaaa gtcagaaatt tatgtagcat gggtaccagc acacaaaggt     1620

ataggaggaa accaagaaat agaccaccta gttagtcaag ggattagaca agttctcttc     1680

ttggaaaaga tagagccagc acaagaagaa catgataaat accatagtaa tgtaaaagaa     1740

ttggtattca aatttggatt acccagaata gtggccagac agatagtaga cacctgtgat     1800

aaatgtcatc agaaaggaga ggctatacat gggcaggcaa attcagatct agggacttgg     1860

caaatggatt gtacccatct agagggaaaa ataatcatag ttgcagtaca tgtagctagt     1920

ggattcatag aagcagaggt aattccacaa gagacaggaa gacagacagc actatttctg     1980

ttaaaattgg caggcagatg gcctattaca catctacaca cagataatgg tgctaacttt     2040

gcttcgcaag aagtaaagat ggttgcatgg tgggcaggga tagagcacac ctttggggta     2100

ccatacaatc cacagagtca gggagtagtg gaagcaatga atcaccacct gaaaaatcaa     2160

atagatagaa tcagggaaca agcaaattca gtagaaacca tagtattaat ggcagttcat     2220

tgcatgaatt ttaaaagaag gggaggaata ggggatatga ctccagcaga aagattaatt     2280

aacatgatca ctacagaaca agagatacaa tttcaacaat caaaaaactc aaaatttaaa     2340

aattttcggg tctattacag agaaggcaga gatcaactgt ggaagggacc cggtgagcta     2400

ttgtggaaag gggaaggagc agtcatctta aaggtaggga cagacattaa ggtagtaccc     2460

agaagaaagg ctaaaattat caaagattat ggaggaggaa aagaggtgga tagcagttcc     2520

cacatggagg ataccggaga ggctagagag gtggcatagc ctcataaaat atctgaaata     2580

taaaactaaa gatctacaaa aggtttgcta tgtgccccat tttaaggtcg gatgggcatg     2640

gtggacctgc agcagagtaa tcttcccact acaggaagga agccatttag aagtacaagg     2700

gtattggcat ttgacaccag aaaaagggtg gctcagtact tatgcagtga ggataacctg     2760

gtactcaaag aacttttgga cagatgtaac accaaactat gcagacattt tactgcatag     2820

cacttatttc ccttgcttta cagcgggaga agtgagaagg gccatcaggg gagaacaact     2880

gctgtcttgc tgcaggttcc cgagagctca taagtaccag gtaccaagcc tacagtactt     2940

agcactgaaa gtag                                                       2954


<210>  106
<211>  31
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  106
caaaagaaaa gatagttgca ttaagagaaa t                                      31


<210>  107
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  107
gccacaattc gtaccccatc ca                                                22


<210>  108
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  108
catacaacac ccccacattt gctata                                            26


<210>  109
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  109
agtcctgcag ggtgtggtat tc                                                22


<210>  110
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  110
actcccacat ttgcyatagc gag                                               23


<210>  111
<211>  22
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  111
agtcctgcag ggtgtggtat tc                                                22


<210>  112
<211>  35
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  112
tagattttag ggaactaaat agggtcactc aggac                                  35


<210>  113
<211>  30
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  113
atayaatact ccartatttg ctataaacag                                        30


<210>  114
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  114
tggtgtctca ttgtttrtac taggta                                            26


<210>  115
<211>  33
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  115
tcagtaacag tactagatgt gggagatgca tat                                    33


<210>  116
<211>  33
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  116
tcagtaacag tactggatgt gggggatgca tat                                    33


<210>  117
<211>  27
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  117
caatactcca gtatttgtca taccaag                                           27


<210>  118
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  118
aacactccar tatttgcyat accaag                                            26


<210>  119
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  119
tytttaaccc tgmtgggtgt ggtat                                             25


<210>  120
<211>  37
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  120
tcagggarct caataaaaga actcaagact tytggga                                37


<210>  121
<211>  37
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  121
tcagggaact yaayaaaaga actcaagact tytggga                                37


<210>  122
<211>  27
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  122
yaayactcca gtatttgyca taccaag                                           27


<210>  123
<211>  288
<212>  PRT
<213>  HIV-1

<400>  123

Phe Leu Asp Gly Ile Asp Lys Ala Gln Glu Glu His Glu Lys Tyr His 
1               5                   10                  15      


Ser Asn Trp Arg Ala Met Ala Ser Asp Phe Asn Leu Pro Pro Val Val 
            20                  25                  30          


Ala Lys Glu Ile Val Ala Ser Cys Asp Lys Cys Gln Leu Lys Gly Glu 
        35                  40                  45              


Ala Met His Gly Gln Val Asp Cys Ser Pro Gly Ile Trp Gln Leu Asp 
    50                  55                  60                  


Cys Thr His Leu Glu Gly Lys Val Ile Leu Val Ala Val His Val Ala 
65                  70                  75                  80  


Ser Gly Tyr Ile Glu Ala Glu Val Ile Pro Ala Glu Thr Gly Gln Glu 
                85                  90                  95      


Thr Ala Tyr Phe Leu Leu Lys Leu Ala Gly Arg Trp Pro Val Lys Thr 
            100                 105                 110         


Ile His Thr Asp Asn Gly Ser Asn Phe Thr Ser Ala Thr Val Lys Ala 
        115                 120                 125             


Ala Cys Trp Trp Ala Gly Ile Lys Gln Glu Phe Gly Ile Pro Tyr Asn 
    130                 135                 140                 


Pro Gln Ser Gln Gly Val Val Glu Ser Met Asn Lys Glu Leu Lys Lys 
145                 150                 155                 160 


Ile Ile Gly Gln Val Arg Asp Gln Ala Glu His Leu Lys Thr Ala Val 
                165                 170                 175     


Gln Met Ala Val Phe Ile His Asn Phe Lys Arg Lys Gly Gly Ile Gly 
            180                 185                 190         


Gly Tyr Ser Ala Gly Glu Arg Ile Val Asp Ile Ile Ala Thr Asp Ile 
        195                 200                 205             


Gln Thr Lys Glu Leu Gln Lys Gln Ile Thr Lys Ile Gln Asn Phe Arg 
    210                 215                 220                 


Val Tyr Tyr Arg Asp Ser Arg Asp Pro Leu Trp Lys Gly Pro Ala Lys 
225                 230                 235                 240 


Leu Leu Trp Lys Gly Glu Gly Ala Val Val Ile Gln Asp Asn Ser Glu 
                245                 250                 255     


Ile Lys Val Val Pro Arg Arg Lys Val Lys Ile Ile Arg Asp Tyr Gly 
            260                 265                 270         


Lys Gln Met Ala Gly Asp Asp Cys Val Ala Ser Arg Gln Asp Glu Asp 
        275                 280                 285             


<210>  124
<211>  28
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  124
gtgataaatg tcarytaaaa ggrgaagc                                          28


<210>  125
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  125
ctttccaaas tggrtctctg ctg                                               23


<210>  126
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  126
catggacaag tagactgtag ycca                                              24


<210>  127
<211>  27
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  127
gtccctgtaa taaacycgaa aattttg                                           27


<210>  128
<211>  29
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  128
ctytrgtytg tatgtctgtt gctatyatg                                         29


<210>  129
<211>  24
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  129
cagcytgmtc tcttacytgt ccta                                              24


<210>  130
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  130
ctaytattct ttcycctgca ctgta                                             25


<210>  131
<211>  36
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  131
tcaagctgaa catctyaara cagcagtaca ratggc                                 36


<210>  132
<211>  36
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  132
tcaggctgaa catctyaara cagcagtaca ratggc                                 36


<210>  133
<211>  20
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  133
gtgggcrggr atcaarctga                                                   20


<210>  134
<211>  23
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  134
ggcrggratc aagcagraat cta                                               23


<210>  135
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  135
gtagccagtg gatayataga agcag                                             25


<210>  136
<211>  27
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  136
gtccctgtaa taaacycgaa aattttg                                           27


<210>  137
<211>  32
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  137
acctgtccta taattttctt taattcyttc tg                                     32


<210>  138
<211>  27
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  138
ctttattcat agattctact acycgtc                                           27


<210>  139
<211>  34
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  139
ctttaattct ttattcatag attctactac ycga                                   34


<210>  140
<211>  43
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  140
tcttaaaatt agcaggaaga tggccagtra maacaataca tac                         43


<210>  141
<211>  43
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  141
ttttaaaact agcaggaaga tggccagtra maacaataca tac                         43


<210>  142
<211>  27
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  142
yaayactcca gtatttgyca taccaag                                           27


<210>  143
<211>  31
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  143
gttctctraa atctaytawt tttctccagt c                                      31


<210>  144
<211>  29
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  144
agaratttgt amagaratgg aaraggaag                                         29


<210>  145
<211>  39
<212>  PRT
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  145

Phe Ala Met Thr Ala Thr Thr Thr Gly Cys Cys Ala Thr Ala Ala Ala 
1               5                   10                  15      


Ala Ala Gly Gly Ala Ala Gly Arg Ala Cys Arg Gly Thr Ala Cys Thr 
            20                  25                  30          


Ala Ala Gly Thr Gly Gly Ala 
        35                  


<210>  146
<211>  25
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  146
tggaaaccaa waatgatagk ggcag                                             25


<210>  147
<211>  26
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  147
gaaaatttaa agtgcaacca akctga                                            26


<210>  148
<211>  31
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  148
taagacagta tgatcagata cycatagaaa t                                      31


<210>  149
<211>  27
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  149
cctgaaatct aytaatttyc tccagtc                                           27


<210>  150
<211>  28
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  150
graatggrgg ttctttctga tgycgttg                                          28


<210>  151
<211>  28
<212>  DNA
<213>  Artificial Sequence

<220>
<223>  synthetic construct

<400>  151
graatggrgg ttctttctga tgyttgtg                                          28


