                               SEQUENCE LISTING

<110> BOEHRINGER INGELHEIM VETMEDICA, INC.
 
<120> PORCINE REPRODUCTIVE AND RESPIRATORY SYNDROME VIRUS, 
      COMPOSITIONS, VACCINE AND METHODS OF USE

<130> 10-0145-WO-1

<140>
<141>

<150> 61/791,504
<151> 2013-03-15

<160> 19    

<170> PatentIn version 3.5

<210> 1
<211> 14963
<212> DNA
<213> Porcine reproductive and respiratory syndrome virus

<400> 1
gggtgttggc tctatgccac gacatttgta ttgtcaggag ctgtgaccac tggcacagcc       60

caaaacttgc tgcacgggaa caccctcctg tgacggcctc cttcagggaa gtttaggggt      120

ttgtccctaa caccttgttt ccggagttgc actgctttac ggtctctcca ctcctttaac      180

catgtctggg attcttgatc ggtgcacgtg tacccccaat gccagggtgt ttgtggcaga      240

cggccaggtc tactgcacac gatgtctcag tgcacggacc ctccttcccc tgaatctcca      300

agtctctgaa cttggggtgt tgggcttgtt ctacaggccc gaagagccac tccggtggac      360

gttgccgcgc gcattcccca ctgttgagtg ctcccctgct ggagcttgtt ggctttctgc      420

gatttttcca attgcacgaa tgaccagtgg aaacctgaac ttccaacaaa ggatagtacg      480

ggttgcagct gagatttaca gagtcggcca actcaccccc acagtcttga agaacctaca      540

agtctatgaa cggggttgcc gctggtaccc catcgtcgga cctgtccctg gagttgccgt      600

ttacgctaac tccctacatg tgagtgataa acctttcccg ggggctactc acgtgctaac      660

caacctgccg ctcccgcaga gacctaagcc tgaagatttt tgcccctttg agtgtgcgat      720

ggctgtcgtc tatgacattg gtcatgacgc tgttatgtat gtggccaaag agagggtctc      780

ctgggctccg cgtggtggag aaaagggaaa attcgaaact gttccagagg agttgaggtt      840

ggttgcagag caacttttta cctccttccc gcctcaccac gtggtagaca tgtcgaagtt      900

catcttcaca gcccctgatt gtggagcttc catgcgggtc gaacgccagt atggctgcct      960

ccccgctggc actgtccctg acggtaattg ctggtggagc ttgtttagct cactcccacc     1020

ggaagttcag tgtagagaaa ttcgccgcgc cacccaattt ggctaccaaa ccaagcatgg     1080

cgttgctggc aagtacctac agcggaggct gcaagccaat ggtctccgag cagtggttga     1140

ctcaaatgga cctatcgtca tacagtattt ctccgttaag gagagctgga tccgccacgt     1200

gaaactggcg ggagagccct gctatcccgg gtttgaggat ctcctcagga taagagtcga     1260

gcccaacacg ttgccattgt ccgacaaggg cgacaaagtc ttccggtttg gcgggcacaa     1320

gtggtacggc gctgggaaga gggcaaggag atcacgtgca ggtgctgcca ctacagttgc     1380

cggtcacgcc tcgcctgttc gcgaaactca acaggccaag aagcacgagg ctgctagcgc     1440

caacaaggct gagctccttg agcgctactc cccgcctgct gaagggaact gcggctggca     1500

ctgcatctct gccattgtca accgaatggt aaattccaag tttgaaactg cccttcctga     1560

aaaagtgaga cccccagaag attgggccac tgatgaggat cttgtgaaca ctatccaaat     1620

tctcaggctc cctgcggcct tggacaggaa cggcgtctgc gcaagcgcca agtacgtcct     1680

taaactggag ggtgaacatt ggactgtttc agtgactccc ggaatgcctc cttccttgct     1740

cccccttgaa tgcgttcaag gttgttgtga gcacaagggc agtcttcgtt ctccagatgc     1800

ggtcgaagtt tccggattcg accctgccag ccttgatcga ctcgccgggg tgatgcatct     1860

gcccagcagt gccatcccag ccgccctggc tgagttgtct ggcgaccctg atcgtccagt     1920

ttccccggcc accactgcgt ggactgtctc gcagttttat gctcgccata gtggcggaga     1980

gcatcctgac caaaagtact taagaaaaat catcagcctc tgcgaggtga tcgagagctg     2040

ctgctgttcc cagaataaaa tcaacctggt cactccggaa gaggttaaaa caaaaattga     2100

ccaatacctc agtggtgcag caagtcttga agaatgcttg gccaggcttg agaaggctcg     2160

cccgccaagc gtgttggaca cctcctttga ttgggatgtt gtgctccctg gtgttggggc     2220

ggctgttcga gcagcgaaac tgcccctcgc caatcagtgt cacgctccag tcactgttgt     2280

gacccaaagg ccttcgttga aatttcagcc tcgaaaagcg gaatctgtca agagcttacc     2340

agagagcagg cctcttcctg ccccgcgcag gaagattagg tccaggtgtg gtagtctgac     2400

ttcattggac ggcaacttcc ctgacagctg ggaagacttg gccggtggtc ccttccattt     2460

cccgacccta cctgagccga cgacacgtcc gggtgagcct gtgcctgtcc ctgcaccgcg     2520

caagactgtg ccccgattgg tgtcgtcact gatagtgtca gtccctgtgc ccgcaccacg     2580

acgtgggatt cgacaggcgg agggaatgaa tttggtggca gtgactccag cgtgccagga     2640

cgagctcctc gatttatctg aatcctcgca ggctgagcat ggggctccct ccttggcatt     2700

gccgcggagt gaggatgccc tggcggtggg gagacgagaa gctgaagaag ttctgagcga     2760

aatctcgggc atgccagatg acattagatt ggtgcccgtg tcatcaagca gctccctgtc     2820

aagcgtagag attacacgcc caaagtactc agctcaagcc atcattgact caggtgggcc     2880

ctgttgtggg cacctccaag aggtaaaaga gaaatacctc aatgtgatgc gtgaggcatg     2940

tgatgcgacc aagcttgatg accctgccac acgagaatgg ctttcccgta tgtgggacag     3000

ggtagacatg ctaacctggc gcaacacgtc catttttcag gcgcctttca ctttggctga     3060

caagttcaag ctcctcccga agatgatact cgaaacaccg ccgccctacc cttgcgggtt     3120

tgtaatgatg ccccgcacac ctgcaccttc tgtgggtgcg gagagcgacc tcaccgttgg     3180

ttcagttgct actgaggatg ttccgcgcat tctcgggaag gtgcaaggtg tttgcaaaac     3240

aaccgtccat gaacccttag cacctttcgc agatggaccg acagatggcc aacctgctag     3300

agaaccccga acacaaactc ctcccgcagg cacaggtggc gttggcttag ttttggattc     3360

tgaaggatcg ccggagctca ctgattcgcc gcctccaaac ggtacagacg cgagcggagg     3420

gggaccgtta tacacagtca agaagaaggc tgagaggtgc tttgaccagc tgagccgacg     3480

ggtttttgac atcgtctccc atctccctgt tttcttctca cgccttttca agtctgacgg     3540

tcattatgct ccgggtgatt ggggttttgc agcttttact ttattgtgcc tctttctgtg     3600

ttacagttac ccggcgttcg gtgtggttcc cctattgggt gtattttctg ggtcttctcg     3660

gcgcgtccgc atgggggttt ttggttgttg gttggctttc gctgttagtt tgttcaagcc     3720

tgctcccgac ccagtcggta ctgcttgtga gtttgactcg ccagagtgta gagacatcct     3780

tcattctttt gagcttctgc aaccttggga ccctgttcgc agccttgtgg tgggccccgt     3840

cggtctcggt cttgccattc ttggcaggtt actgggcggg gcacgctacg tctggttgtt     3900

tttgcttagg cttggcatcg tttcagactg tatcttggct ggagcctatg tgctttcgca     3960

aggtaggtgt aaaaagtgtt ggggatcttg tataagaact gctcccagtg aggtcgcctt     4020

caatgtgttt cccttcacac gcgcaaccag atcgtcactt attgacctgt gcgaccggtt     4080

ctgcgcgccc aaaggcatgg accccatctt cctcgctact ggatggcgtg gatgctgggc     4140

cggtcagagc cccattgagc aacccactga gaaacccatt gcgttcgccc agttggatga     4200

gaagaaaatc actgctaaaa ctgtggttgc ccagccttat gaccccaacc aagctgtgaa     4260

gtgcttacga gtcctgcagg cgggcggggc gatggtggct gaggcgattc caaaagtagt     4320

caaagtttct gctatcccat ttcgagctcc cttcttccct gtcggagtga aagttgatcc     4380

tgaatgcagg gtcgtggttg actctgacac cttcacaact gctctccggt ccggctactc     4440

caccacaaac ctcattcttg gtgtggggga ttttgcccag ctgaatgggt tgaaaatcag     4500

gcaaatttcc aagccttcgg gaggaggtcc acacatcatg gcggccttac atgtcgcttg     4560

ctcgatggct ttgcacatgc tcgttgggat ttacgtcact acggtgggtt cttgtggttc     4620

tggcactaac gacccgtggt gcactaaccc gtttgccgtc cctgtctacg gacctggctc     4680

tctttgcacc tccaggttgt gcatctccca gcatggcctt actctgccct taacagcgct     4740

tgtggcgggg tttggcattc aggaagttgc cttggtggtt ttaatctttg tttccatcgg     4800

aggtatggct cacagattaa gttgcaaggc tgatgtactg tgtattctgc ttgcgattgc     4860

cagctatgtt tggttacccc tcacctggtt gctctgtgtg tttccttgct ggttacgttg     4920

gttttctttg catcccctca ccgttacatg gttggtgttt ttcttgattt ctgtaaacat     4980

gccctcagga gtcttggcct tggtgttgtt aatctctctc tggctccttg gccgctatac     5040

caatgtcgca ggtcttgtca ctccttatga cattcaccat tacaccaacg gcccccgtgg     5100

cgttgccgcc ttggccactg caccggatgg gacctacttg gctgctgtcc gccgcgctgc     5160

gctgactggt cgtaccatgc tgtttacccc gtcccagctt gggtcactcc ttgagggtgc     5220

ctttagaacc caaaagccta cactgaatac cgtcaatgtg gtcgggtcct ctatgggctc     5280

cggcggggtg ttcaccattg acgggaaaat caagtgcgtg acagcagcgc atattctcac     5340

aggcaactct gccagggtct ccggggtcgg cttcaatcaa atgttggatt tcgatgtgaa     5400

aggggatttt gccatagccg attgtccgga ttggcaagga gtcgctccca agtcccagtt     5460

ctgtgaggat gggtggactg gccgcgctta ttggctaaca tcctctggcg tcgaacccgg     5520

cgtcatcggg aggggatttg ccttttgttt caccgcgtgc ggcgattccg ggtccccagt     5580

gatcaccgag gccggagaac ttgtcggtgt ccacacggga tcaaacaaac aaggaggagg     5640

cattgtcacg cgcccttcag gccagttttg taatgtgaca cccaccaaat taagtgaatt     5700

gagtgaattc ttcgctggac ccagggtccc gcttggcgat gtgaaggtcg gcaaccacat     5760

aatcaaagac acaaatgagg tgccctcaga tctttgcgcc ttgctcgctg ccaaacccga     5820

gttggaagga ggtctctcca ccgttcaact tttgtgcgtg tttttcctcc tatggagaat     5880

gatgggacat gcctggacgc ctttggttgc tgttggtttt ttcgttttga acgaaatcct     5940

cccagcggtt ctggtccgga gtgttttctc ctttggaatg ttcgcactgt cttggttcac     6000

accgtggtct gcacaaattc taatgatcag gcttctaaca gcagctctta acagaaacag     6060

atggtcactt gccttttaca gccttggtgc actaactgga tttgctgcag accttgcaat     6120

taatcagggg cactcgctgc acgtggccat gaattttagc acctatgcat tcctacctcg     6180

tgcaatggcc gtgacctcac cagtcccaac gattgcgtgt ggtgttgtgc acttgcttgc     6240

tattgttttg tacttgttca agtaccgcag cctgcatacc gtcttggtcg gcgatggagc     6300

gttttccgca gctttctttt tgcgatactt tgcggaggga aaactgaggg aaggggtgtc     6360

gcagtcttgc ggcatgaatc atgagtcact gactggtgcc atcgccatca gactcgacga     6420

cgaggacctg gatttcctta taaaactgac tgattttaag tgctttgttt ccgcgtccaa     6480

catgaggaat gcggcaggcc agttcatcga ggccgcttat gccaaagcac ttagggtgga     6540

acttgctcag ttagtgcagg ttgacaaggt ccgtggtgtc ttagctaagc ttgaagcatt     6600

tgctgacact gcgacgcccc aactctcacc tggcgacatt gttgttgctc ttggccatac     6660

gcctgttggc agtatcttcg acttgaaagt gggcagcacc aagcataccc tacaagccat     6720

cgagaccaga gtcctcgctg ggtccagaat gaccgtggcg cgcgtcgttg atccgactcc     6780

cgcacctcca cccgtgcccg tgcccattcc tctcccgccg aaagttttag agaacggccc     6840

ccgtgcctgg gaggacgagg accgtctgaa caaaaagagg cggcgcaaaa tggaagccgt     6900

tggcatttat gtcatggacg ggaaaaagta ccaaaaattt tgggataaga attctggtga     6960

tgtgttctat gaggaagtcc acgataacac agacgcgtgg gaatgcctca gaactgacga     7020

ccctgccgac ttggatcctg agaaggggac tttgtgtggg cacctcacca tagagaatag     7080

accttaccat gtttacgcct ccccttccgg taggaagttc ctggtccctg ccaacccaga     7140

gagtgggaaa gcccagtggg aagctgcaag gctttccata gagcaggccc ttggcatgat     7200

gaacgtcgac ggcgagttga ccgccaagga ggtagagaaa ctgaagagaa taattgacaa     7260

actccagggc ctgactaagg agcagtgttt aaactactag ccgccagcgg cttgacccgc     7320

tgtggtcgcg gcggcttggt tattactgag acagcggtga aaatagtcag attccacagt     7380

cggaccttta ccctggggcc tgtgaatttg aaagtggcta gcgaggttga gttgaaagac     7440

gccgtcgagc acaaccaaca cccaattgca agaccagttg acggtggcgt tgtgctcctg     7500

cgctctgcag ttccttcgct catagacgtc ttgatctccg gggccgacgc atcccctcag     7560

ttactcgccc atcatgggcc aggaaacacc gggattgatg gcacgctctg ggattttgag     7620

tccgtagcca ctaaagagga agtcacactt agtgcacaga taatacaggc ttgtggcatt     7680

aggcgcggcg atgctcctga gatcggcctc ccttacaaac tgcaccctgt taggggcaac     7740

cctgaacgtg taaaaggggt tttgaagaac acaaggtttg gggacatacc ttacaagacc     7800

cctagtgaca ctgggagccc tgtacatgcg gccgcctgtc ttacgcctaa tgccaccccg     7860

gtgactgacg ggcgctccgt cttggccacg accatgccct ccgggtttga gttgtatgtg     7920

ccgaccattc cagcatctgt ccttgattac cttgattcca ggccagactg ccctaaacag     7980

ttgacggagc acgggtgtga agatgctgca ttgagagatc tctccaaata tgacttgtcc     8040

acccaaggtt ttgttttgcc cggggtcctc cgcctcgtac ggaaatattt atttgcccac     8100

gtgggcaagt gcccgcctgt ccatcggccc tccacctacc cggccaagaa ttccatggct     8160

ggaataaacg ggaataggtt cccaaccaag gacattcaga gcattcctga gatcgacgtt     8220

ctatgtgcac aggctgtacg agagaactgg caaactgtta ccccttgcac cctcaagaag     8280

cagtattgcg ggaagaagaa aaccaggacc atactcggta ccaataactt tatcgcgctg     8340

gcccaccggg cagcgctgag tggtgtcacc cagggcttca tgaaaaaggc atttaactcg     8400

cccattgccc tcgggaagaa taaattcaag gagctacaaa ctccggtcct gggcaggtgc     8460

cttgaggctg atcttgcatc ttgcgatcga tccactcccg cgattgtccg ctggtttgcc     8520

gcccatctcc tttatgaact tgcctgcgct gaagagcacc taccgtcata tgtgctgaac     8580

tgctgtcatg acctattggt cacgcaatcc ggtgcggtga ctaagagagg tggcctgtca     8640

tctggtgatc cgatcacctc tgtgtccaac accatttaca gtctggtgat ttacgcgcag     8700

cacatggtgc tcagttactt taaaagtggt cacccacatg gtctcttgtt ccttcaggac     8760

cagctaaagt ttgaggacat gctcaaggtt caacccctga ttgtctactc ggacgatctt     8820

gtgctgtatg ccgagtctcc caccatgcca aactaccatt ggtgggttga gcacctgaat     8880

ttgatgttag ggtttcagac ggacccgaag aaaacaacca ttactgactc gccgtctttc     8940

ctgggctgca ggataatgaa tgggtgtcag ctagtcccaa accgtgacag gattctcgca     9000

gctcttgcct accacatgaa ggcgaataat gtttctgagt actacgcctc cgccgctgca     9060

atactcatgg acagttgtgc ttgtctggag tacgaccctg aatggtttga agaacttgtg     9120

gtaggaatgg cgcaatgcgc tcgcaaggac ggctatagct tccccggccc gccgttcttc     9180

ctatccatgt gggagaaact caggtctaat tatgagggga agaggtcaag ggtgtgtggg     9240

tactgcggag cttcagcccc gtatgccact tcctgtggtc ttgatgtctg tgtttaccac     9300

actcacttcc accagcattg tccagtcata atctggtgtg gccacccggc gggttctggg     9360

tcctgtgatg attgcaaatc tcccacaggg aaagatacaa accccctgga tgaggtctta     9420

aaacaagtcc catataagcc tccacggact gtcctcatgc atgtggagca gggcctcacc     9480

ccccttgacc caggcagata tcagacccgt cgtgggttgg ttgccgttag gcgcgggatc     9540

aggggaaatg aagtcgacct accagatggt gattatgcca gcaccgcgtt actcccaact     9600

tgtaaagaga tcaacatggt cgctgttgct tccaatgtat tgcgcagtag atttatcatc     9660

ggtccacccg gtgctggaaa aacacactgg ctccttcaac aggttcagga tggtgatgtc     9720

atttatacac cgacccacca gaccatgctc gacatgatta aagctttggg gacgtgtcga     9780

tttaacgttc cggcaggtac aacgctgcaa ttccccgccc cttcccgcac tggcccgtgg     9840

gttcgcatcc tggctggcgg gtggtgtcct ggcaaaaatt cattcctgga cgaagctgcg     9900

tattgcaacc atcttgatgt cttgaggctc cttagcaaaa ctactctcac ctgtttggga     9960

gacttcaaac aactccaccc ggtgggtttt gattctcact gctatgtctt tgacatcatg    10020

cctcaaactc aactgaagac tatctggagg tttggacaga atatctgtga tgccattcaa    10080

ccagattaca gggacaagct tatgtccatg gtcaacacaa ctcgtgtaac ctatgtggaa    10140

aagcccgtca aatatgggca agtcctcacc ccttaccata gggaccgaga ggatggcgcc    10200

attaccattg actccagtca aggtgccaca tttgatgtgg ttacactgca tttgcccacg    10260

aaagattcac tcaacaaaca aagggccctt gttgctatca ccagggcaag acatgccatc    10320

tttgtgtatg acccatatag gcaactgcag agcttatttg atcttcctgc aaaaagcacg    10380

cccgtcaacc tggccgtgca ccgcgatggg caactgattg tgctagacag aaataataaa    10440

gaatgcacgg ttgcccaggc tctgggcaat ggtgacaaat tcagagctac agataagcgc    10500

gttgtagatt ctcttcgcgc catttgtgct gacctggaag ggtcgagctc gccgcttccc    10560

aaggttgcac ataacttggg gttttatttc tcacctgatt tgacacagtt tgccaagctt    10620

ccaatagaac ttgcaccaca ttggccagtg gtgacgaccc aaaataatga gaactggcct    10680

gatcgactgg ttgccagcct acgccccatt cacaaatata gccgtgcatg tatcggtgcc    10740

ggctatatgg tgggcccctc ggtgttttta ggcacccctg gggtagtatc atactatctc    10800

acaaaatttg tcaaaggcga ggctcaggtg cttccagaaa cggtcttcag cactggccga    10860

attgaggtgg actgccgaga gtaccttgat gatcgggagc gggaagtcgc agcgtccctc    10920

ccgcatgcct ttatcggcga cgtcaaaggc actactgtgg gagggtgtca ccatgtcacc    10980

tctaaatatc tcccgcgctt cctccccaag gaatcagtcg cggtggtcgg ggtttcaagc    11040

cccgggaaag ccgcaaaagc agtgtgcaca ttgacggatg tgtacctccc agaccttgag    11100

gcctacctcc atcctgtgac ccagtccaag tgctggaaaa tgatgttgga ctttaaagaa    11160

gttcgactga tggtttggaa ggacaagacg gcctatttcc aactcgaagg tcgtcatttc    11220

acctggtatc agcttgctag ctttgcttcg tacatccgtg ttcctgtaaa ttccacggtg    11280

tacctggacc cctgcatggg ccccgccctt tgcaacagga aagtcgttgg gtcccctcat    11340

tggggagctg acctcgcagt caccccttat gattatggag ctagaaaaat tttgtccagt    11400

gcatatcatg gtgagatgcc tcctgggtac aagattctgg cgtgcgcaga gttctcgcta    11460

gacgacccag tcagatacaa gcatacttgg gggttcgagt cggatacagc gtacttgtac    11520

gagttcactg gaaacggcga ggactgggag gattacaacg acgcgtttcg tgcgcgacag    11580

aaaggaaaaa tttataaggc cactgccacc agcctgaagt tccatttccc tccgggtcac    11640

atcgttgaac caactttggg cctgaactga aatgagatgg gagccgcaca gagccttttt    11700

gacaaaattg gtcaactttt tgttgatgcc ttcacggagt tcttggtgtc tattgttgat    11760

atcatcatat ttttggccat tttgttcggc ttcaccatcg ccggttggct ggtggtcttt    11820

tgcatcagat tggttttctc cgcgatactc cgtgcgcgcc ctaccgttca ctctgagcaa    11880

ttacagaaga tcctatgagg cctacctctc ccagtgccag gtggacattc ctgcctgggg    11940

gactaaacac cctttgggga tgatctggca ccacaaggtg tcgaccctaa ttgatgaaat    12000

ggtgtcgcgt cggatgtacc gcaccatgga acaagcaggg caggctgcct ggaaacaggt    12060

ggtgaccgag gcaacgctgt ctcgtattag tagtttggat gtggtggctc atttccagca    12120

tcttgccgcc atagaagccg agacttgtaa atacttggcc tcccggctgc caatgctaca    12180

caacctgcgc ttgacagggt caaatgtaac catagtgtat aatagctccc tggaccgggt    12240

gtttgctgtt ttcccgacct ccagttcccg gccaaagctt catgattttc ggcaatggct    12300

aatagctgtg cattcctcca tattctcctc tgttgcggct tcttgtaccc ttttcgtcgt    12360

actgtggttg cggcttccaa taatacgtac tgtttttggt ttccgctggt taggggcaat    12420

ttttctttcg agctcacagt gaattacacg gtatgtcctc cctgcctcac ccggcaagcg    12480

gcttcagaga tctacgaacc cagcagatct ctttggtgta ggatagggca agatcgatgt    12540

acagagagcg atcacgatga gctaggtttc ctggtgccgc ctggcctctc taacgaaggc    12600

catttaatta gtgtctacgc ctggctggcg ttcctatcct tcagttacac gtcgcagttc    12660

catcccgaaa tattcggcat agggaatgtg agcgaggtct atgtcgacat caagcaccaa    12720

tttatttgtg ctgttcatga tgggcagaac accaccttgc ctcgccatga caacatcacg    12780

gccgtgtacc agacgtatta tcaacaccag gttgatggcg gcaactggtt tcacctggaa    12840

tggctgcgtc ccttcttttc ttcttggttg gttttgaatg tttcatggtt tctcaggcgt    12900

tcgcctgcaa gccgtgtttc agttcgagtc tttcagacat caaaaccaac accaccgcag    12960

ctgcaggctt tgctgtcctc caagacatca gctgtcttag gcatggcgac tcgtcctctg    13020

aggcgactcg caaaagccgc caatgccgta cggcgatagg gacgcccgta tacattactg    13080

tcacagccaa cgtgacagat gagaattatt tgcattcctc tgaccttctc atgctttctt    13140

cttgcctttt ctacgcttct gagatgagtg aaaagggatt caaggtgata tttggcaatg    13200

tgtcaggcat cgtggctgtt tgtgtcaact tcaccagcta tgtccaacat gttaaggaat    13260

ttacccgacg ctccttggta gtcgatcatg tacgactact acatttcatg acacctgaga    13320

ctatgaggtg ggcaacagtt ttagcctgtc tttttgccat cctattggca atttgaatgt    13380

tcaggtatgt tggggaaatg cttgaccgcg ggctgttgct cgcagttgct ttttttgtgg    13440

tgtatcgtgc cgttctgttt tgttgcgctc gtcaacgcca acaacagcag cagctcccat    13500

ttacagttaa tttataacct gacgatatgt gagctgaatg gcacagattg gctaaataga    13560

aaattcgact gggcagtgga gacctttgtc atctttccag tattgactca catcgtctcc    13620

tatggtgccc tcaccaccag ccatttcctt gacacagtcg gtttggtcac cgtgtccacc    13680

gccggatact accacaggcg gtatgtcctg agtagcattt acgctgtctg cgccctggcc    13740

gcgctgattt gcttcgccat caggctgaca aaaaactgca tgtcctggcg ctactcatgc    13800

actagatata ctaattttct tctagacacc aagggcaaac tctatcgttg gcggtctccc    13860

gtcattatag agaaaggggg aaaaatcgag gttaacggtc acttgatcga cctcaagaga    13920

gttgtgcttg atggttccgc agcaacccct gtaaccaaag tttcagcgga acaatgggga    13980

cgtccttaga tgacttttgc aatgacagca cggctccaca aaaggtgctt ttggcgtttt    14040

ccattaccta tacgccaata atgatatatg ccctgaaggt aagtcgcggc cgattgttag    14100

ggcttctaca ccttttgatt ttcttgaatt gtgcttttac cttcgggtac atgacattcg    14160

cgcattttcg cagcacgaac aaggtcgcgc tcactatggg agcagtagtt gcactccttt    14220

ggggggtgta ttcagccata gaaacctgga gattcatcac ctccagatgc cggttgtgct    14280

tgctaggccg caggtacatt ctggcccctg cccaccacgt tgaaagtgtc gcaggctttc    14340

atccgataac ggcaagtgat aaccacgcat ttgtcgttcg gcgtcccggc tccactacag    14400

tcaacggcac attggtgccc gggttgaaaa gcctcgtgtt gggtggcaga agagctgtta    14460

aacgaggagt ggtgaacctt gtcaaatatg ccaaataaca acggcaagca gcagaaaaga    14520

aaaaggggga tggccagcca gtcaatcagc tgtgccagat gctgggcagg atcatcgccc    14580

agcaaaacca gcccagaggt aagggaccgg gaaaaaggaa taagaagaaa agcccggaga    14640

agccccattt tcctctggcg actgaagatg acgttagaca tcacttcacc cctagtgagc    14700

gacaactgtg tctgtcgtca atccaaactg cctttaacca aggcgctgga acttgcaccc    14760

tgtcagactc gggtagggtg agttatgcag tggagtttag tttgcctacg catcatactg    14820

tgcgcctgat tcgtgccaca acatcaccct cagcatgatg agctggcatt cttgagacat    14880

cccagtgttt gaattggaag tgtgtgtggt gaatggcact gattgacatt gtgcctctaa    14940

gtcacctatt caattagggc gac                                            14963


<210> 2
<211> 14963
<212> DNA
<213> Porcine reproductive and respiratory syndrome virus

<400> 2
gggtgttggc tctatgccac gacatttgta ttgtcaggag ctgtgaccac tggcacagcc       60

caaaacttgc tgcacgggaa caccctcctg tgacggcctc cttcagggaa gtttaggggt      120

ttgtccctaa caccttgttt ccggagttgc actgctttac ggtctctcca ctcctttaac      180

catgtctggg attcttgatc ggtgcacgtg tacccccaat gccagggtgt ttgtggcaga      240

cggccaggtc tactgcacac gatgtctcag tgcacggacc ctccttcccc tgaatctcca      300

agtctctgaa cttggggtgt tgggcttgtt ctacaggccc gaagagccac tccggtggac      360

gttgccgcgc gcattcccca ctgttgagtg ctcccctgct ggagcttgtt ggctttctgc      420

gatttttcca attgcacgaa tgaccagtgg aaacctgaac ttccaacaaa ggatagtacg      480

ggttgcagct gagatttaca gagtcggcca actcaccccc acagtcttga agaacctaca      540

agtctatgaa cggggttgcc gctggtaccc catcgtcgga cctgtccctg gagttgccgt      600

ttacgctaac tccctacatg tgagtgataa acctttcccg ggggctactc acgtgctaac      660

caacctgccg ctcccgcaga gacctaagcc tgaagatttt tgcccctttg agtgtgcgat      720

ggctgtcgtc tatgacattg gtcatgacgc tgttatgtat gtggccaaag agagggtctc      780

ctgggctccg cgtggtggag aaaagggaaa attcgaaact gttccagagg agttgaggtt      840

ggttgcagag caacttttta cctccttccc gcctcaccac gtggtagaca tgtcgaagtt      900

catcttcaca gcccctgatt gtggagcttc tatgcgggtc gaacgccagt atggctgcct      960

ccccgctggc actgtccctg acggtaattg ctggtggagc ttgtttagct cactcccacc     1020

ggaagttcag tgtagagaaa ttcgccgcgc cacccaattt ggctaccaaa ccaagcatgg     1080

cgttgctggc aagtacctac agcggaggct gcaagccaat ggtctccgag cagtggttga     1140

ctcaaacgga cctatcgtca tacagtattt ctccgttaag gagagctgga tccgccacgt     1200

gaaactggcg ggagagccct gctatcccgg gtttgaggat ctcctcagga taagagtcga     1260

gcccaacacg ttgccattgt ccgacaaggg cgacaaagtc ttccggtttg gcgggcacaa     1320

gtggtacggc gctgggaaga gggcaaggag atcacgtgca ggtgctgcca ctacagttgc     1380

cggtcacgcc tcgcctgttc gcgaaactca acaggccaag aagcacgagg ctgctagcgc     1440

caacaaggct gagctccttg agcgctactc cccgcctgct gaagggaact gcggctggca     1500

ctgcatctct gccattgtca accgaatggt aaattccaag tttgaaactg cccttcctga     1560

aaaagtgaga cccccagaag attgggccac tgatgaggat cttgtgaaca ctatccaaat     1620

tctcaggctc cctgcggcct tggacaggaa cggcgtctgc gcaagcgcca agtacgtcct     1680

taaactggag ggtgaacatt ggactgtttc agtgactccc ggaatgcctc cttccttgct     1740

cccccttgaa tgcgttcaag gttgttgtga gcacaagggc agtcttcgtt ctccagatgc     1800

ggtcgaagtt tccggattcg accctgccag ccttgatcga ctcgccgggg tgatgcatct     1860

gcccagcagt gccatcccag ccgccctggc tgagttgtct ggcgaccctg atcgtccagt     1920

ttccccggcc accactgcgt ggactgtctc gcagttttat gctcgccata gtggcggaga     1980

gcatcctgac caaaagtact taagaaaaat catcagcctc tgcgaggtga tcgagagctg     2040

ctgctgctcc cagaataaaa tcaacctggt cactccggaa gaggttaaaa caaaaattga     2100

ccaatacctc agtggtgcag caagtcttga agaatgtttg gccaggcttg agaaggctcg     2160

cccgccaagc gtgttggaca cctcctttga ttgggatgtt gtgctccctg gtgttggggc     2220

ggctgttcga gcagcgaaac tgcccctcgc caatcagtgt cacgctccag tcactgttgt     2280

gacccaaagg ccttcgttga aatttcagcc tcgaaaagcg gaatctgtca agagcttacc     2340

agagagcagg cctcttcctg ccccgcgcag gaagattagg tccaggtgtg gtagtctgac     2400

ttcattggac ggcaacttcc ctgacagctg ggaagacttg gccggtggtc ccttccattt     2460

cccgacccta cctgagccga cgacacgtcc gggtgagcct gtgcctgtcc ctgcaccgcg     2520

caagactgtg ccccgattgg tgtcgtcact gatagtgtca gtccctgtgc ccgcaccacg     2580

acgtgggatt cgacaggcgg agggaatgaa tttggtggca gtgactccag cgtgccagga     2640

cgagctcctc gatttatctg aatcctcgca ggctgagcat ggggctccct ccttggcatt     2700

gccgcggagt gaggatgccc tggcggtggg gagacgagaa gctgaagaag ttctgagcga     2760

aatctcgggc atgccagatg acattagatt ggtgcccgtg tcatcaagca gctccctgtc     2820

aagcgtagag attacacgcc caaagtactc agctcaagcc atcattgact caggtgggcc     2880

ctgttgtggg cacctccaag aggtaaaaga gaaatgcctc aatgtgatgc gtgaggcatg     2940

tgatgcgacc aagcttgatg accctgccac acgagaatgg ctttcccgta tgtgggacag     3000

ggtagacatg ttaacctggc gcaacacgtc catttttcag gcgcctttca ctttggctga     3060

caagttcaag ctcctcccga agatgatact cgaaacaccg ccgccctacc cttgcgggtt     3120

tgtaatgatg ccccgcacac ctgcaccttc tgtgggtgcg gagagcgacc tcaccgttgg     3180

ttcagttgct actgaggatg ttccgcgcat tctcgggaag gtgcaaggtg tttgcaaaac     3240

aaccgtccat gaacccttag cacctttcgc agatggaccg acagatggcc aacctgctag     3300

agaaccccga acacaaactc ctcccgcagg cacaggtggc gttggcttag ttttggattc     3360

tgaaggatcg ccggagctca ctgattcgcc gcctccaaac ggtacagacg cgagcggagg     3420

gggaccgtta tacacagtca agaagaaggt tgagaggtgc tttgaccagc tgagccgacg     3480

ggtttttgac atcgtctccc atctccctgt tttcttctca cgccttttca agtctgacgg     3540

tcattatgct ccgggtgatt ggggttttgc agcttttact ttattgtgcc tctttctgtg     3600

ttacagttac ccggcgttcg gtgtggttcc cctattgggt gtattttctg ggtcttctcg     3660

gcgcgtccgc atgggggttt ttggttgttg gttggctttc gctgttagtt tgttcaagcc     3720

tgctcccgac ccagtcggta ctgcttgtga gtttgactcg ccagagtgta gagacatcct     3780

tcattctttt gagcttctgc aaccttggga ccctgttcgc agccttgtgg tgggccccgt     3840

cggtctcggt cttgccattc ttggcaggtt actgggcggg gcacgctacg tctggctgtt     3900

tttgcttagg cttggcatcg tttcagactg tatcttggct ggagcctatg tgctttcgca     3960

aggtaggtgt aaaaagtgtt ggggatcttg tataagaact gctcccagtg aggtcgcctt     4020

caatgtgttt cccttcacac gcgcaaccag atcgtcactt attgacctgt gcgaccggtt     4080

ctgcgcgccc aaaggcatgg accccatctt cctcgctact ggatggcgtg gatgctgggc     4140

cggtcagagc cccattgagc aacccactga gaaacccatt gcgttcgccc agttggatga     4200

gaagaaaatc actgctaaaa ctgtggttgc ccagccttat gaccccaacc aagctgtgaa     4260

gtgcttacga gtcctgcagg cgggcggggc gatggtggct gaggcgattc caaaagtagt     4320

caaagtttct gctatcccat ttcgagctcc cttcttccct gtcggagtga aagttgatcc     4380

tgaatgcagg gtcgtggttg actctgacac cttcacaact gctctccggt ccggctactc     4440

caccacaaac ctcattcttg gtgtggggga ttttgcccag ctgaatgggt tgaaaatcag     4500

gcaaatttcc aagccttcgg gaggaggtcc acacatcatg gcggccttac atgtcgcttg     4560

ctcgatggct ttgcacatgc tcgttgggat ttacgtcact acggtgggtt cttgtggttc     4620

tggcactaac gacccgtggt gcactaaccc gtttgccgtc cctgtctacg gacctggctc     4680

tctttgcacc tccaggttgt gcatctccca gcatggcctt actctgccct taacagcgct     4740

tgtggcgggg tttggcattc aggaagttgc cttggtggtt ttaatctttg tttccatcgg     4800

aggtatggct cacagattaa gttgcaaggc tgatgtactg tgtattctgc ttgcgattgc     4860

cagctatgtt tggttacccc tcacctggtt gctctgtgtg tttccttgct ggttacgttg     4920

gttttctttg catcccctca ccgttacatg gttggtgttt ttcttgattt ctgtaaacat     4980

gccctcagga gtcttggcct tggtgttgtt aatctctctc tggctccttg gccgctatac     5040

caatgtcgca ggtcttgtca ctccttatga cattcaccat tacaccaacg gcccccgtgg     5100

cgttgccgcc ttggccactg caccggatgg gacctacttg gctgctgtcc gccgcgctgc     5160

gctgactggt cgtaccatgc tgtttacccc gtcccagctt gggtcactcc ttgagggtgc     5220

ctttagaacc caaaagccta cactgaatac cgtcaatgtg gtcgggtcct ctatgggctc     5280

cggcggggtg ttcaccattg acgggaaaat caagtgcgtg acagcagcgc atattctcac     5340

aggcaactct gccagggtct ccggggtcgg cttcaatcaa atgttggatt tcgatgtgaa     5400

aggggatttt gccatagccg attgtccgga ttggcaagga gtcgctccca agtcccagtt     5460

ctgtgaggat gggtggactg gccgcgctta ttggctaaca tcctctggcg tcgaacccgg     5520

cgtcatcggg aggggatttg ccttttgttt caccgcgtgc ggcgattccg ggtccccagt     5580

gatcaccgag gccggagaac ttgtcggtgt ccacacggga tcaaataaac aaggaggagg     5640

cattgtcacg cgcccttcag gccagttttg taatgtgaca cccaccaaat taagtgaatt     5700

gagtgaattc tttgctggac ccagggtccc gcttggcgat gtgaaggtcg gcaaccacat     5760

aatcaaagac acaaatgagg tgccctcaga tctttgtgcc ttgctcgctg ccaaacccga     5820

gttggaagga ggtctctcca ccgttcaact tttgtgcgtg tttttcctcc tatggagaat     5880

gatgggacat gcctggacgc ctttggttgc tgttggtttt ttcgttttga acgaaatcct     5940

cccagcggtt ctggtccgga gtgttttctc ctttggaatg ttcgcactgt cttggttcac     6000

accgtggtct gcacaaattc taatgatcag gcttctaaca gcagctctta acagaaacag     6060

atggtcactt gccttttaca gccttggtgc actaactgga tttgctgcag accttgcaat     6120

taatcagggg cactcgctgc acgtggccat gaattttagc acctatgcat tcctacctcg     6180

tgcaatggcc gtgacctcac cagtcccaac gattgcgtgt ggtgttgtgc acttgcttgc     6240

tattgttttg tacttgttca agtaccgcag cctgcatacc gtcttggtcg gcgatggagc     6300

gttttccgca gctttctttt tgcgatactt tgcggaggga aaactgaggg aaggggtgtc     6360

gcagtcttgc ggcatgaatc atgagtcact gactggtgcc atcgccatca gactcgacga     6420

cgaggacctg gatttcctta taaaactgtc tgattttaag tgctttgttt ccgcgtccaa     6480

catgaggaat gcggcaggcc agttcatcga ggccgcttat gccaaagcac ttagggtgga     6540

acttgctcag ttagtgcagg ttgacaaggt ccgtggtgtc ttagctaagc ttgaagcatt     6600

tgctgacact gcgacgcccc aactctcacc tggcgacatt gttgttgctc ttggccatac     6660

gcctgttggc agtatcttcg acttgaaagt gggcagcacc aagcataccc tacaagccat     6720

cgagaccaga gtcctcgctg ggtccagaat gaccgtggcg cgcgtcgtag atccgactcc     6780

cgcacctcca cccgtgcccg tgcccattcc tctcccgccg aaagttttag agaacggccc     6840

ccgtgcctgg gaggacgagg accgtctgaa caaaaagagg cggcgcaaaa tggaagccgt     6900

tggcatttat gtcatggacg ggaaaaagta ccaaaaattt tgggatcaga attctggtga     6960

tgtgttctat gaggaagtcc acgataacac agacgcgtgg gaatgcctca gaactgacga     7020

ccctgccgac ttggatcctg agaaggggac tttgtgtggg cacctcacca tagagaatag     7080

accttaccat gtttacgcct ccccttccgg taggaagttc ctggtccctg ccaacccaga     7140

gagtgggaaa gcccagtggg aagctgcaag gctttccata gagcaggccc ttggcatgat     7200

gaacgtcgac ggcgagttga ccgccaagga ggtagagaaa ctgaagagaa taattgacaa     7260

actccagggc ctgactaagg agcagtgttt aaactactag ccgccagcgg cttgacccgc     7320

tgtggtcgcg gcggcttggt tattgctgag acagcggtga aaatagtcag attccacagt     7380

cggaccttta ccctggggcc tgtgaatttg aaagtggcta gcgaggttga gttgaaagac     7440

gccgtcgagc acaaccaaca cccaattgca agaccagttg acggtggcgt tgtgctcctg     7500

cgctctgcag ttccttcgct catagacgtc ttgatctccg gggccgacgc atcccctcag     7560

ttactcgccc atcatgggcc aggaaacacc gggattgatg gtacgctctg ggattttgag     7620

tccgtagcca ctaaagagga agtcacactt agtgcacaga taatacaggc ttgtggcatt     7680

aggcgcggcg atgctcctga gatcggcctc ccttacaaac tgcaccctgt taggggcaac     7740

cctgaacgtg taaaaggggt tttgaagaac acaaggtttg gggacatacc ttacaagacc     7800

cctagtgaca ctgggagccc tgtacatgcg gccgcctgtc ttacgcctaa tgccaccccg     7860

gtgactgacg ggcgctccgt cttggccacg accatgccct ccgggtttga gttgtatgtg     7920

ccgaccattc cagcatctgt ccttgattac cttgattcca ggccagactg ccctaaacag     7980

ttgacggagc acgggtgtga agatgctgca ttgagagatc tctccaaata tgacttgtcc     8040

acccaaggtt ttgttttgcc cggggtcctc cgcctcgtac ggaaatattt atttgcccac     8100

gtgggcaagt gcccgcctgt ccatcggccc tccacctacc cggccaagaa ttccatggct     8160

ggaataaacg ggaataggtt cccaaccaag gacattcaga gcattcctga gatcgacgtt     8220

ctatgtgcac aggctgtacg agagaactgg caaactgtta ccccttgcac cctcaagaag     8280

cagtattgcg ggaagaagaa aaccaggacc atactcggta ccaataactt tatcgcgctg     8340

gcccaccggg cagcgctgag tggagtcacc cagggcttta tgaaaaaggc atttaactcg     8400

cccattgccc tcgggaagaa taaattcaag gagctacaaa ctccggtcct gggcaggtgc     8460

cttgaggctg atcttgcatc ttgcgatcga tccactcccg cgattgtccg ctggtttgcc     8520

gcccatctcc tttatgaact tgcctgcgct gaagagcacc taccgtcata tgtgctgaac     8580

tgctgtcatg acctattggt cacgcaatcc ggtgcggtga ctaagagagg tggcctgtca     8640

tctggtgatc cgatcacctc tgtgtccaac accatttaca gtctggtgat ttacgcgcag     8700

cacatggtgc tcagttactt taaaagtggt cacccacatg gtctcttgtt ccttcaggac     8760

cagctaaagt ttgaggacat gctcaaggtt caacccctga ttgtctactc ggacgatctt     8820

gtgctgtatg ccgagtctcc caccatgcca aactaccatt ggtgggttga gcacctgaat     8880

ttgatgttag ggtttcagac ggacccgaag aaaacaacca ttactgactc gccgtctttc     8940

ctgggctgca ggataatgaa tgggtgtcag ctagtcccaa accgtgacag gattctcgca     9000

gctcttgcct accacatgaa ggcgaataat gtttctgagt actacgcctc cgccgctgca     9060

atactcatgg acagttgtgc ttgtctggag tacgaccctg aatggtttga agaacttgtg     9120

gtaggaatgg cgcaatgcgc tcgcaaggac ggctatagct tccccggccc gccgttcttc     9180

ctatccatgt gggagaaact caggtctaat tatgagggga agaggtcaag ggtgtgtggg     9240

tactgcggag cttcagcccc gtatgccact tcctgtggtc ttgatgtctg tgtttaccac     9300

actcacttcc accagcattg tccagtcata atctggtgtg gccacccggc gggttctggg     9360

tcctgtgatg attgcaaatc tcccacaggg aaagatacaa accccctgga tgaggtctta     9420

aaacaagtcc catataagcc tccacggact gtcctcatgc atgtggagca gggcctcacc     9480

ccccttgacc caggcagata tcagacccgt cgtgggttgg ttgccgttag gcgcgggatc     9540

aggggaaatg aagtcgacct accagatggt gattatgcca gcaccgcgtt actcccaact     9600

tgtaaagaga tcaacatggt cgctgttgct tccaatgtat tgcgcagtag atttatcatc     9660

ggtccacccg gtgctggaaa aacacactgg ctccttcaac aggttcagga tggtgatgtc     9720

atttatacac cgacccacca gaccatgctc gacatgatta aagctttggg gacgtgtcga     9780

tttaacgttc cggcaggtac aacgctgcaa ttccccgccc cttcccgcac tggcccgtgg     9840

gttcgcatcc tggctggcgg gtggtgtcct ggcaaaaatt cattcctgga cgaagctgcg     9900

tattgcaacc atcttgatgt cttgaggctc cttagcaaaa ctactctcac ctgtttagga     9960

gacttcaaac aactccaccc ggtgggtttt gattctcact gctatgtctt tgacatcatg    10020

cctcaaactc aactgaagac tatctggagg tttggacaga atatctgtga tgccattcaa    10080

ccagattaca gggacaagct tatgtccatg gtcaacacaa ctcgtgtaac ctatgtggaa    10140

aagcccgtca aatatgggca agtcctcacc ccttaccata gggaccgaga ggatggcgcc    10200

attaccattg actccagtca aggtgccaca tttgatgtgg ttacactgca tttgcccacg    10260

aaagattcac tcaacaaaca aagggccctt gttgctatca ccagggcaag acatgccatc    10320

tttgtgtatg acccatatag gcaactgcag agcttatttg gtcttcctgc aaaaagcacg    10380

cccgtcaacc tggccgtgca ccgcgatggg caactgattg tgctagacag aaataataaa    10440

gaatgcacgg ttgcccaggc tctgggcaat ggtgacaaat tcagagctac agataagcgc    10500

gttgtagatt ctcttcgcgc catttgtgct gacctggaag ggtcgagctc gccgcttccc    10560

aaggttgcac ataacttggg gttttatttc tcacctgatt tgacacagtt tgccaagctt    10620

ccaatagaac ttgcaccaca ttggccagtg gtgacgaccc aaaataatga gaactggcct    10680

gatcgactgg ttgccagcct acgccccatt cacaaatata gccgtgcatg tatcggtgcc    10740

ggctatatgg tgggcccctc ggtgttttta ggcacccctg gggtagtatc atactatctc    10800

acaaaatttg tcaaaggcga ggctcaggtg cttccagaaa cggtcttcag cactggccga    10860

attgaggtgg actgccgaga gtaccttgat gattgggagc gggaagtcgc agcgtccctc    10920

ccgcatgcct ttatcggcga cgtcaaaggc actactgtgg gagggtgtca ccatgtcacc    10980

tctaaatatc tcccgcgctt cctccccaag gaatcagtcg cggtggtcgg ggtttcaagc    11040

cccgggaaag ccgcaaaagc agtgtgcaca ttgacggatg tgtacctccc agaccttgag    11100

gcctacctcc atcctgtgac ccagtccaag tgctggaaaa tgatgttgga ctttaaagaa    11160

gttcgactga tggtttggaa ggacaagacg gcctatttcc aactcgaagg tcgtcatttc    11220

acctggtatc agcttgctag ctttgcttcg tacatccgtg ttcctgtaaa ttccacggtg    11280

tacctggacc cctgcatggg ccccgccctt tgcaacagga aagtcgttgg gtcccctcat    11340

tggggagctg acctcgcagt caccccttat gattatggag ctagaaaaat tttgtccagt    11400

gcatatcatg gtgagatgcc tcctgggtac aagattctgg cgtgcgcaga gttctcgcta    11460

gacgacccag tcagatacaa gcatacttgg gggttcgagt cggatacagc gtacttgtac    11520

gagttcactg gaaacggcga ggactgggag gattacaacg acgcgtttcg tgcgcgacag    11580

aaaggaaaaa tttataaggc cactgccacc agcctgaagt tccatttccc tccgggtcac    11640

atcgttgaac caactttggg cctgaactga aatgagatgg gagccgcaca gagccttttt    11700

gacaaaattg gtcaactttt tgttgatgcc ttcacggagt tcttggtgtc tattgttgat    11760

atcatcatat ttttggccat tttgttcggc ttcaccatcg ccggttggct ggtggtcttt    11820

tgcatcagat tggttttctc cgcgatactc cgtgcgcgcc ctaccgttca ctctgagcaa    11880

ttacagaaga tcctatgagg cctacctctc ccagtgccag gtggacattc ctgcctgggg    11940

gactaaacac cctttgggga tgatctggca ccacagggtg tcgaccctaa ttgatgaaat    12000

ggtgtcgcgt cggatgtacc gcaccatgga acaagcaggg caggctgcct ggaaacaggt    12060

ggtgaccgag gcaacgctgt ctcgtattag tagtttggat gtggtggctc atttccagca    12120

tcttgccgcc atagaagccg agacttgtaa atacttggcc tcccggctgc caatgctaca    12180

caacctgcgc ttgacagggt caaatgtaac catagtgtat aatagctccc tggaccgggt    12240

gtttgctgtt ttcccgacct ccagttcccg gccaaagctt catgattttc ggcaatggct    12300

aatagctgtg cattcctcca tattctcctc tgttgcggct tcttgtaccc ttttcgtcgt    12360

actgtggttg cggcttccaa taatacgtac tgtttttggt ttccgctggt taggggcaat    12420

ttttctttcg agctcacagt gaattacacg gtatgtcctc cctgcctcac ccggcaagcg    12480

gcttcagaga tctacgaacc cagcagatct ctttggtgta ggatagggca agatcgatgt    12540

acagagagcg atcacgatga gctaggtttc ctggtgccgc ctggcctctc taacgaaggc    12600

catttaatta gtgtctacgc ctggctggcg ttcctatcct tcagttacac gtcgcagttc    12660

catcccgaaa tattcggcat agggaatgtg agtgaggtct atgtcgacat caagcaccaa    12720

cttatttgtg ctgttcatga tgggcagaac accaccttgc ctcgccatga caacatcacg    12780

gccgtgtacc agacgtatta tcaacaccag gttgatggcg gcaactggtt tcacctggaa    12840

tggctgcgtc ccttcttttc ttcttggttg gttttgaatg tttcatggtt tctcaggcgt    12900

tcgcctgcaa gccgtgtttc agttcgagtc tttcagacat caaaaccaac accaccgcag    12960

ctgcaggttt tgctgtcctc caagacatca gctgtcttag gcatggcgac tcgtcctctg    13020

aggcgactcg caaaagccgc caatgccgta cggcgatagg gacgcccgta tacattactg    13080

tcacagccaa cgtgacagat gagaattatt tgcattcctc tgaccttctc atgctttctt    13140

cttgcctttt ctacgcttct gagatgagtg aaaagggatt caaggtgata tttggcaatg    13200

tgtcaggcat cgtggctgtt tgtgtcaact tcaccagcta tgtccaacat gttaaggaat    13260

ttacccgacg ctccttggta gtcgatcatg tacgactact acatttcatg acacctgaga    13320

ctatgaggtg ggcaacagtt ttagcctgtc tttttgccat cctattggca atttgaatgt    13380

tcaggtatgt tggggaattg cttgaccgcg ggctgttgct cgcagttgct ttttttgtgg    13440

tgtatcgtgc cgttctgttt tgttgcgctc gtcaacgcca acaacagcag cagctcccat    13500

ttacagttaa tttataacct gacgatatgt gagctgaatg gcacagattg gctaaataga    13560

aaattcgact gggcagtgga gacctttgtc atctttccag tattgactca catcgtctcc    13620

tatggtgccc tcaccaccag ccatttcctt gacacagtcg gtttggtcac cgtgtccacc    13680

gccggatact accacaggcg gtatgtcctg agtagcattt acgctgtctg cgccctggcc    13740

gcgctgattt gcttcgccat caggctgaca aaaaactgca tgtcctggcg ctactcatgc    13800

actagatata ctaattttct tctagacacc aagggcaaac tctatcgttg gcggtctccc    13860

gtcattatag agaaaagggg aaaaatcgag gttaacggtc acttgatcga cctcaagaga    13920

gttgtgcttg atggttccgc agcaacccct gtaaccaaag ttttagcgga acaatgggga    13980

cgtccttaga tgacttttgc aatgacagca cggctccaca aaaggtgctt ttggcgtttt    14040

ccattaccta tacgccaata atgatatatg ccctgaaggt aagtcgcggc cgattgtcag    14100

ggcttctaca ccttttgatt ttcttgaatt gtgcttttac cttcgggtac atgacattcg    14160

cgcattttcg cagcacgaac aaggtcgcgc tcactatggg agcagtagtt gcactccttt    14220

ggggggtgta ttcagccata gaaacctgga gattcatcac ctccagatgc cggttgtgct    14280

tgctaggccg caggtacatt ctggcccctg cccaccacgt tgaaagtgtc gcaggctttc    14340

atccgataac ggcaagtgat aaccacgcat ttgtcgttcg gcgtcccggc tccactacag    14400

tcaacggcac attggtgccc gggttgaaaa gcctcgtgtt gggtggcaga agagctgtta    14460

aacgaggagt ggtgaacctt gtcaaatatg ccaaataaca acggcaagca gcagaaaaga    14520

aaaaggggga tggccagcca gtcaatcagc tgtgccagat gctgggcagg atcatcgccc    14580

agcaaaacca gcccagaggt aagggaccgg gaaaaaggaa taagaagaaa agcccggaga    14640

agccccattt tcctctggcg actgaagatg acgttagaca tcacttcacc cctagtgagc    14700

gacaactgtg tctgtcgtca atccaaactg cctttaacca aggcgctgga acttgcaccc    14760

tgtcagactc gggtagggtg agttatgcag tggagtttag tttgcctacg catcatactg    14820

tgcgcctgat tcgtgccaca acatcaccct cagcatgatg agctggcatt cttgagacat    14880

cccagtgttt gaattggaag tgtgtgtggt gaatggcact gattgacatt gtgcctctaa    14940

gtcacctatt caattagggc gac                                            14963


<210> 3
<211> 2372
<212> PRT
<213> Porcine reproductive and respiratory syndrome virus

<400> 3
Met Ser Gly Ile Leu Asp Arg Cys Thr Cys Thr Pro Asn Ala Arg Val 
1               5                   10                  15      


Phe Val Ala Asp Gly Gln Val Tyr Cys Thr Arg Cys Leu Ser Ala Arg 
            20                  25                  30          


Thr Leu Leu Pro Leu Asn Leu Gln Val Ser Glu Leu Gly Val Leu Gly 
        35                  40                  45              


Leu Phe Tyr Arg Pro Glu Glu Pro Leu Arg Trp Thr Leu Pro Arg Ala 
    50                  55                  60                  


Phe Pro Thr Val Glu Cys Ser Pro Ala Gly Ala Cys Trp Leu Ser Ala 
65                  70                  75                  80  


Ile Phe Pro Ile Ala Arg Met Thr Ser Gly Asn Leu Asn Phe Gln Gln 
                85                  90                  95      


Arg Ile Val Arg Val Ala Ala Glu Ile Tyr Arg Val Gly Gln Leu Thr 
            100                 105                 110         


Pro Thr Val Leu Lys Asn Leu Gln Val Tyr Glu Arg Gly Cys Arg Trp 
        115                 120                 125             


Tyr Pro Ile Val Gly Pro Val Pro Gly Val Ala Val Tyr Ala Asn Ser 
    130                 135                 140                 


Leu His Val Ser Asp Lys Pro Phe Pro Gly Ala Thr His Val Leu Thr 
145                 150                 155                 160 


Asn Leu Pro Leu Pro Gln Arg Pro Lys Pro Glu Asp Phe Cys Pro Phe 
                165                 170                 175     


Glu Cys Ala Met Ala Val Val Tyr Asp Ile Gly His Asp Ala Val Met 
            180                 185                 190         


Tyr Val Ala Lys Glu Arg Val Ser Trp Ala Pro Arg Gly Gly Glu Lys 
        195                 200                 205             


Gly Lys Phe Glu Thr Val Pro Glu Glu Leu Arg Leu Val Ala Glu Gln 
    210                 215                 220                 


Leu Phe Thr Ser Phe Pro Pro His His Val Val Asp Met Ser Lys Phe 
225                 230                 235                 240 


Ile Phe Thr Ala Pro Asp Cys Gly Ala Ser Met Arg Val Glu Arg Gln 
                245                 250                 255     


Tyr Gly Cys Leu Pro Ala Gly Thr Val Pro Asp Gly Asn Cys Trp Trp 
            260                 265                 270         


Ser Leu Phe Ser Ser Leu Pro Pro Glu Val Gln Cys Arg Glu Ile Arg 
        275                 280                 285             


Arg Ala Thr Gln Phe Gly Tyr Gln Thr Lys His Gly Val Ala Gly Lys 
    290                 295                 300                 


Tyr Leu Gln Arg Arg Leu Gln Ala Asn Gly Leu Arg Ala Val Val Asp 
305                 310                 315                 320 


Ser Asn Gly Pro Ile Val Ile Gln Tyr Phe Ser Val Lys Glu Ser Trp 
                325                 330                 335     


Ile Arg His Val Lys Leu Ala Gly Glu Pro Cys Tyr Pro Gly Phe Glu 
            340                 345                 350         


Asp Leu Leu Arg Ile Arg Val Glu Pro Asn Thr Leu Pro Leu Ser Asp 
        355                 360                 365             


Lys Gly Asp Lys Val Phe Arg Phe Gly Gly His Lys Trp Tyr Gly Ala 
    370                 375                 380                 


Gly Lys Arg Ala Arg Arg Ser Arg Ala Gly Ala Ala Thr Thr Val Ala 
385                 390                 395                 400 


Gly His Ala Ser Pro Val Arg Glu Thr Gln Gln Ala Lys Lys His Glu 
                405                 410                 415     


Ala Ala Ser Ala Asn Lys Ala Glu Leu Leu Glu Arg Tyr Ser Pro Pro 
            420                 425                 430         


Ala Glu Gly Asn Cys Gly Trp His Cys Ile Ser Ala Ile Val Asn Arg 
        435                 440                 445             


Met Val Asn Ser Lys Phe Glu Thr Ala Leu Pro Glu Lys Val Arg Pro 
    450                 455                 460                 


Pro Glu Asp Trp Ala Thr Asp Glu Asp Leu Val Asn Thr Ile Gln Ile 
465                 470                 475                 480 


Leu Arg Leu Pro Ala Ala Leu Asp Arg Asn Gly Val Cys Ala Ser Ala 
                485                 490                 495     


Lys Tyr Val Leu Lys Leu Glu Gly Glu His Trp Thr Val Ser Val Thr 
            500                 505                 510         


Pro Gly Met Pro Pro Ser Leu Leu Pro Leu Glu Cys Val Gln Gly Cys 
        515                 520                 525             


Cys Glu His Lys Gly Ser Leu Arg Ser Pro Asp Ala Val Glu Val Ser 
    530                 535                 540                 


Gly Phe Asp Pro Ala Ser Leu Asp Arg Leu Ala Gly Val Met His Leu 
545                 550                 555                 560 


Pro Ser Ser Ala Ile Pro Ala Ala Leu Ala Glu Leu Ser Gly Asp Pro 
                565                 570                 575     


Asp Arg Pro Val Ser Pro Ala Thr Thr Ala Trp Thr Val Ser Gln Phe 
            580                 585                 590         


Tyr Ala Arg His Ser Gly Gly Glu His Pro Asp Gln Lys Tyr Leu Arg 
        595                 600                 605             


Lys Ile Ile Ser Leu Cys Glu Val Ile Glu Ser Cys Cys Cys Ser Gln 
    610                 615                 620                 


Asn Lys Ile Asn Leu Val Thr Pro Glu Glu Val Lys Thr Lys Ile Asp 
625                 630                 635                 640 


Gln Tyr Leu Ser Gly Ala Ala Ser Leu Glu Glu Cys Leu Ala Arg Leu 
                645                 650                 655     


Glu Lys Ala Arg Pro Pro Ser Val Leu Asp Thr Ser Phe Asp Trp Asp 
            660                 665                 670         


Val Val Leu Pro Gly Val Gly Ala Ala Val Arg Ala Ala Lys Leu Pro 
        675                 680                 685             


Leu Ala Asn Gln Cys His Ala Pro Val Thr Val Val Thr Gln Arg Pro 
    690                 695                 700                 


Ser Leu Lys Phe Gln Pro Arg Lys Ala Glu Ser Val Lys Ser Leu Pro 
705                 710                 715                 720 


Glu Ser Arg Pro Leu Pro Ala Pro Arg Arg Lys Ile Arg Ser Arg Cys 
                725                 730                 735     


Gly Ser Leu Thr Ser Leu Asp Gly Asn Phe Pro Asp Ser Trp Glu Asp 
            740                 745                 750         


Leu Ala Gly Gly Pro Phe His Phe Pro Thr Leu Pro Glu Pro Thr Thr 
        755                 760                 765             


Arg Pro Gly Glu Pro Val Pro Val Pro Ala Pro Arg Lys Thr Val Pro 
    770                 775                 780                 


Arg Leu Val Ser Ser Leu Ile Val Ser Val Pro Val Pro Ala Pro Arg 
785                 790                 795                 800 


Arg Gly Ile Arg Gln Ala Glu Gly Met Asn Leu Val Ala Val Thr Pro 
                805                 810                 815     


Ala Cys Gln Asp Glu Leu Leu Asp Leu Ser Glu Ser Ser Gln Ala Glu 
            820                 825                 830         


His Gly Ala Pro Ser Leu Ala Leu Pro Arg Ser Glu Asp Ala Leu Ala 
        835                 840                 845             


Val Gly Arg Arg Glu Ala Glu Glu Val Leu Ser Glu Ile Ser Gly Met 
    850                 855                 860                 


Pro Asp Asp Ile Arg Leu Val Pro Val Ser Ser Ser Ser Ser Leu Ser 
865                 870                 875                 880 


Ser Val Glu Ile Thr Arg Pro Lys Tyr Ser Ala Gln Ala Ile Ile Asp 
                885                 890                 895     


Ser Gly Gly Pro Cys Cys Gly His Leu Gln Glu Val Lys Glu Lys Tyr 
            900                 905                 910         


Leu Asn Val Met Arg Glu Ala Cys Asp Ala Thr Lys Leu Asp Asp Pro 
        915                 920                 925             


Ala Thr Arg Glu Trp Leu Ser Arg Met Trp Asp Arg Val Asp Met Leu 
    930                 935                 940                 


Thr Trp Arg Asn Thr Ser Ile Phe Gln Ala Pro Phe Thr Leu Ala Asp 
945                 950                 955                 960 


Lys Phe Lys Leu Leu Pro Lys Met Ile Leu Glu Thr Pro Pro Pro Tyr 
                965                 970                 975     


Pro Cys Gly Phe Val Met Met Pro Arg Thr Pro Ala Pro Ser Val Gly 
            980                 985                 990         


Ala Glu Ser Asp Leu Thr Val Gly  Ser Val Ala Thr Glu  Asp Val Pro 
        995                 1000                 1005             


Arg Ile  Leu Gly Lys Val Gln  Gly Val Cys Lys Thr  Thr Val His 
    1010                 1015                 1020             


Glu Pro  Leu Ala Pro Phe Ala  Asp Gly Pro Thr Asp  Gly Gln Pro 
    1025                 1030                 1035             


Ala Arg  Glu Pro Arg Thr Gln  Thr Pro Pro Ala Gly  Thr Gly Gly 
    1040                 1045                 1050             


Val Gly  Leu Val Leu Asp Ser  Glu Gly Ser Pro Glu  Leu Thr Asp 
    1055                 1060                 1065             


Ser Pro  Pro Pro Asn Gly Thr  Asp Ala Ser Gly Gly  Gly Pro Leu 
    1070                 1075                 1080             


Tyr Thr  Val Lys Lys Lys Ala  Glu Arg Cys Phe Asp  Gln Leu Ser 
    1085                 1090                 1095             


Arg Arg  Val Phe Asp Ile Val  Ser His Leu Pro Val  Phe Phe Ser 
    1100                 1105                 1110             


Arg Leu  Phe Lys Ser Asp Gly  His Tyr Ala Pro Gly  Asp Trp Gly 
    1115                 1120                 1125             


Phe Ala  Ala Phe Thr Leu Leu  Cys Leu Phe Leu Cys  Tyr Ser Tyr 
    1130                 1135                 1140             


Pro Ala  Phe Gly Val Val Pro  Leu Leu Gly Val Phe  Ser Gly Ser 
    1145                 1150                 1155             


Ser Arg  Arg Val Arg Met Gly  Val Phe Gly Cys Trp  Leu Ala Phe 
    1160                 1165                 1170             


Ala Val  Ser Leu Phe Lys Pro  Ala Pro Asp Pro Val  Gly Thr Ala 
    1175                 1180                 1185             


Cys Glu  Phe Asp Ser Pro Glu  Cys Arg Asp Ile Leu  His Ser Phe 
    1190                 1195                 1200             


Glu Leu  Leu Gln Pro Trp Asp  Pro Val Arg Ser Leu  Val Val Gly 
    1205                 1210                 1215             


Pro Val  Gly Leu Gly Leu Ala  Ile Leu Gly Arg Leu  Leu Gly Gly 
    1220                 1225                 1230             


Ala Arg  Tyr Val Trp Leu Phe  Leu Leu Arg Leu Gly  Ile Val Ser 
    1235                 1240                 1245             


Asp Cys  Ile Leu Ala Gly Ala  Tyr Val Leu Ser Gln  Gly Arg Cys 
    1250                 1255                 1260             


Lys Lys  Cys Trp Gly Ser Cys  Ile Arg Thr Ala Pro  Ser Glu Val 
    1265                 1270                 1275             


Ala Phe  Asn Val Phe Pro Phe  Thr Arg Ala Thr Arg  Ser Ser Leu 
    1280                 1285                 1290             


Ile Asp  Leu Cys Asp Arg Phe  Cys Ala Pro Lys Gly  Met Asp Pro 
    1295                 1300                 1305             


Ile Phe  Leu Ala Thr Gly Trp  Arg Gly Cys Trp Ala  Gly Gln Ser 
    1310                 1315                 1320             


Pro Ile  Glu Gln Pro Thr Glu  Lys Pro Ile Ala Phe  Ala Gln Leu 
    1325                 1330                 1335             


Asp Glu  Lys Lys Ile Thr Ala  Lys Thr Val Val Ala  Gln Pro Tyr 
    1340                 1345                 1350             


Asp Pro  Asn Gln Ala Val Lys  Cys Leu Arg Val Leu  Gln Ala Gly 
    1355                 1360                 1365             


Gly Ala  Met Val Ala Glu Ala  Ile Pro Lys Val Val  Lys Val Ser 
    1370                 1375                 1380             


Ala Ile  Pro Phe Arg Ala Pro  Phe Phe Pro Val Gly  Val Lys Val 
    1385                 1390                 1395             


Asp Pro  Glu Cys Arg Val Val  Val Asp Ser Asp Thr  Phe Thr Thr 
    1400                 1405                 1410             


Ala Leu  Arg Ser Gly Tyr Ser  Thr Thr Asn Leu Ile  Leu Gly Val 
    1415                 1420                 1425             


Gly Asp  Phe Ala Gln Leu Asn  Gly Leu Lys Ile Arg  Gln Ile Ser 
    1430                 1435                 1440             


Lys Pro  Ser Gly Gly Gly Pro  His Ile Met Ala Ala  Leu His Val 
    1445                 1450                 1455             


Ala Cys  Ser Met Ala Leu His  Met Leu Val Gly Ile  Tyr Val Thr 
    1460                 1465                 1470             


Thr Val  Gly Ser Cys Gly Ser  Gly Thr Asn Asp Pro  Trp Cys Thr 
    1475                 1480                 1485             


Asn Pro  Phe Ala Val Pro Val  Tyr Gly Pro Gly Ser  Leu Cys Thr 
    1490                 1495                 1500             


Ser Arg  Leu Cys Ile Ser Gln  His Gly Leu Thr Leu  Pro Leu Thr 
    1505                 1510                 1515             


Ala Leu  Val Ala Gly Phe Gly  Ile Gln Glu Val Ala  Leu Val Val 
    1520                 1525                 1530             


Leu Ile  Phe Val Ser Ile Gly  Gly Met Ala His Arg  Leu Ser Cys 
    1535                 1540                 1545             


Lys Ala  Asp Val Leu Cys Ile  Leu Leu Ala Ile Ala  Ser Tyr Val 
    1550                 1555                 1560             


Trp Leu  Pro Leu Thr Trp Leu  Leu Cys Val Phe Pro  Cys Trp Leu 
    1565                 1570                 1575             


Arg Trp  Phe Ser Leu His Pro  Leu Thr Val Thr Trp  Leu Val Phe 
    1580                 1585                 1590             


Phe Leu  Ile Ser Val Asn Met  Pro Ser Gly Val Leu  Ala Leu Val 
    1595                 1600                 1605             


Leu Leu  Ile Ser Leu Trp Leu  Leu Gly Arg Tyr Thr  Asn Val Ala 
    1610                 1615                 1620             


Gly Leu  Val Thr Pro Tyr Asp  Ile His His Tyr Thr  Asn Gly Pro 
    1625                 1630                 1635             


Arg Gly  Val Ala Ala Leu Ala  Thr Ala Pro Asp Gly  Thr Tyr Leu 
    1640                 1645                 1650             


Ala Ala  Val Arg Arg Ala Ala  Leu Thr Gly Arg Thr  Met Leu Phe 
    1655                 1660                 1665             


Thr Pro  Ser Gln Leu Gly Ser  Leu Leu Glu Gly Ala  Phe Arg Thr 
    1670                 1675                 1680             


Gln Lys  Pro Thr Leu Asn Thr  Val Asn Val Val Gly  Ser Ser Met 
    1685                 1690                 1695             


Gly Ser  Gly Gly Val Phe Thr  Ile Asp Gly Lys Ile  Lys Cys Val 
    1700                 1705                 1710             


Thr Ala  Ala His Ile Leu Thr  Gly Asn Ser Ala Arg  Val Ser Gly 
    1715                 1720                 1725             


Val Gly  Phe Asn Gln Met Leu  Asp Phe Asp Val Lys  Gly Asp Phe 
    1730                 1735                 1740             


Ala Ile  Ala Asp Cys Pro Asp  Trp Gln Gly Val Ala  Pro Lys Ser 
    1745                 1750                 1755             


Gln Phe  Cys Glu Asp Gly Trp  Thr Gly Arg Ala Tyr  Trp Leu Thr 
    1760                 1765                 1770             


Ser Ser  Gly Val Glu Pro Gly  Val Ile Gly Arg Gly  Phe Ala Phe 
    1775                 1780                 1785             


Cys Phe  Thr Ala Cys Gly Asp  Ser Gly Ser Pro Val  Ile Thr Glu 
    1790                 1795                 1800             


Ala Gly  Glu Leu Val Gly Val  His Thr Gly Ser Asn  Lys Gln Gly 
    1805                 1810                 1815             


Gly Gly  Ile Val Thr Arg Pro  Ser Gly Gln Phe Cys  Asn Val Thr 
    1820                 1825                 1830             


Pro Thr  Lys Leu Ser Glu Leu  Ser Glu Phe Phe Ala  Gly Pro Arg 
    1835                 1840                 1845             


Val Pro  Leu Gly Asp Val Lys  Val Gly Asn His Ile  Ile Lys Asp 
    1850                 1855                 1860             


Thr Asn  Glu Val Pro Ser Asp  Leu Cys Ala Leu Leu  Ala Ala Lys 
    1865                 1870                 1875             


Pro Glu  Leu Glu Gly Gly Leu  Ser Thr Val Gln Leu  Leu Cys Val 
    1880                 1885                 1890             


Phe Phe  Leu Leu Trp Arg Met  Met Gly His Ala Trp  Thr Pro Leu 
    1895                 1900                 1905             


Val Ala  Val Gly Phe Phe Val  Leu Asn Glu Ile Leu  Pro Ala Val 
    1910                 1915                 1920             


Leu Val  Arg Ser Val Phe Ser  Phe Gly Met Phe Ala  Leu Ser Trp 
    1925                 1930                 1935             


Phe Thr  Pro Trp Ser Ala Gln  Ile Leu Met Ile Arg  Leu Leu Thr 
    1940                 1945                 1950             


Ala Ala  Leu Asn Arg Asn Arg  Trp Ser Leu Ala Phe  Tyr Ser Leu 
    1955                 1960                 1965             


Gly Ala  Leu Thr Gly Phe Ala  Ala Asp Leu Ala Ile  Asn Gln Gly 
    1970                 1975                 1980             


His Ser  Leu His Val Ala Met  Asn Phe Ser Thr Tyr  Ala Phe Leu 
    1985                 1990                 1995             


Pro Arg  Ala Met Ala Val Thr  Ser Pro Val Pro Thr  Ile Ala Cys 
    2000                 2005                 2010             


Gly Val  Val His Leu Leu Ala  Ile Val Leu Tyr Leu  Phe Lys Tyr 
    2015                 2020                 2025             


Arg Ser  Leu His Thr Val Leu  Val Gly Asp Gly Ala  Phe Ser Ala 
    2030                 2035                 2040             


Ala Phe  Phe Leu Arg Tyr Phe  Ala Glu Gly Lys Leu  Arg Glu Gly 
    2045                 2050                 2055             


Val Ser  Gln Ser Cys Gly Met  Asn His Glu Ser Leu  Thr Gly Ala 
    2060                 2065                 2070             


Ile Ala  Ile Arg Leu Asp Asp  Glu Asp Leu Asp Phe  Leu Ile Lys 
    2075                 2080                 2085             


Leu Thr  Asp Phe Lys Cys Phe  Val Ser Ala Ser Asn  Met Arg Asn 
    2090                 2095                 2100             


Ala Ala  Gly Gln Phe Ile Glu  Ala Ala Tyr Ala Lys  Ala Leu Arg 
    2105                 2110                 2115             


Val Glu  Leu Ala Gln Leu Val  Gln Val Asp Lys Val  Arg Gly Val 
    2120                 2125                 2130             


Leu Ala  Lys Leu Glu Ala Phe  Ala Asp Thr Ala Thr  Pro Gln Leu 
    2135                 2140                 2145             


Ser Pro  Gly Asp Ile Val Val  Ala Leu Gly His Thr  Pro Val Gly 
    2150                 2155                 2160             


Ser Ile  Phe Asp Leu Lys Val  Gly Ser Thr Lys His  Thr Leu Gln 
    2165                 2170                 2175             


Ala Ile  Glu Thr Arg Val Leu  Ala Gly Ser Arg Met  Thr Val Ala 
    2180                 2185                 2190             


Arg Val  Val Asp Pro Thr Pro  Ala Pro Pro Pro Val  Pro Val Pro 
    2195                 2200                 2205             


Ile Pro  Leu Pro Pro Lys Val  Leu Glu Asn Gly Pro  Arg Ala Trp 
    2210                 2215                 2220             


Glu Asp  Glu Asp Arg Leu Asn  Lys Lys Arg Arg Arg  Lys Met Glu 
    2225                 2230                 2235             


Ala Val  Gly Ile Tyr Val Met  Asp Gly Lys Lys Tyr  Gln Lys Phe 
    2240                 2245                 2250             


Trp Asp  Lys Asn Ser Gly Asp  Val Phe Tyr Glu Glu  Val His Asp 
    2255                 2260                 2265             


Asn Thr  Asp Ala Trp Glu Cys  Leu Arg Thr Asp Asp  Pro Ala Asp 
    2270                 2275                 2280             


Leu Asp  Pro Glu Lys Gly Thr  Leu Cys Gly His Leu  Thr Ile Glu 
    2285                 2290                 2295             


Asn Arg  Pro Tyr His Val Tyr  Ala Ser Pro Ser Gly  Arg Lys Phe 
    2300                 2305                 2310             


Leu Val  Pro Ala Asn Pro Glu  Ser Gly Lys Ala Gln  Trp Glu Ala 
    2315                 2320                 2325             


Ala Arg  Leu Ser Ile Glu Gln  Ala Leu Gly Met Met  Asn Val Asp 
    2330                 2335                 2340             


Gly Glu  Leu Thr Ala Lys Glu  Val Glu Lys Leu Lys  Arg Ile Ile 
    2345                 2350                 2355             


Asp Lys  Leu Gln Gly Leu Thr  Lys Glu Gln Cys Leu  Asn Tyr 
    2360                 2365                 2370         


<210> 4
<211> 1463
<212> PRT
<213> Porcine reproductive and respiratory syndrome virus

<400> 4
Gly Ala Val Phe Lys Leu Leu Ala Ala Ser Gly Leu Thr Arg Cys Gly 
1               5                   10                  15      


Arg Gly Gly Leu Val Ile Thr Glu Thr Ala Val Lys Ile Val Arg Phe 
            20                  25                  30          


His Ser Arg Thr Phe Thr Leu Gly Pro Val Asn Leu Lys Val Ala Ser 
        35                  40                  45              


Glu Val Glu Leu Lys Asp Ala Val Glu His Asn Gln His Pro Ile Ala 
    50                  55                  60                  


Arg Pro Val Asp Gly Gly Val Val Leu Leu Arg Ser Ala Val Pro Ser 
65                  70                  75                  80  


Leu Ile Asp Val Leu Ile Ser Gly Ala Asp Ala Ser Pro Gln Leu Leu 
                85                  90                  95      


Ala His His Gly Pro Gly Asn Thr Gly Ile Asp Gly Thr Leu Trp Asp 
            100                 105                 110         


Phe Glu Ser Val Ala Thr Lys Glu Glu Val Thr Leu Ser Ala Gln Ile 
        115                 120                 125             


Ile Gln Ala Cys Gly Ile Arg Arg Gly Asp Ala Pro Glu Ile Gly Leu 
    130                 135                 140                 


Pro Tyr Lys Leu His Pro Val Arg Gly Asn Pro Glu Arg Val Lys Gly 
145                 150                 155                 160 


Val Leu Lys Asn Thr Arg Phe Gly Asp Ile Pro Tyr Lys Thr Pro Ser 
                165                 170                 175     


Asp Thr Gly Ser Pro Val His Ala Ala Ala Cys Leu Thr Pro Asn Ala 
            180                 185                 190         


Thr Pro Val Thr Asp Gly Arg Ser Val Leu Ala Thr Thr Met Pro Ser 
        195                 200                 205             


Gly Phe Glu Leu Tyr Val Pro Thr Ile Pro Ala Ser Val Leu Asp Tyr 
    210                 215                 220                 


Leu Asp Ser Arg Pro Asp Cys Pro Lys Gln Leu Thr Glu His Gly Cys 
225                 230                 235                 240 


Glu Asp Ala Ala Leu Arg Asp Leu Ser Lys Tyr Asp Leu Ser Thr Gln 
                245                 250                 255     


Gly Phe Val Leu Pro Gly Val Leu Arg Leu Val Arg Lys Tyr Leu Phe 
            260                 265                 270         


Ala His Val Gly Lys Cys Pro Pro Val His Arg Pro Ser Thr Tyr Pro 
        275                 280                 285             


Ala Lys Asn Ser Met Ala Gly Ile Asn Gly Asn Arg Phe Pro Thr Lys 
    290                 295                 300                 


Asp Ile Gln Ser Ile Pro Glu Ile Asp Val Leu Cys Ala Gln Ala Val 
305                 310                 315                 320 


Arg Glu Asn Trp Gln Thr Val Thr Pro Cys Thr Leu Lys Lys Gln Tyr 
                325                 330                 335     


Cys Gly Lys Lys Lys Thr Arg Thr Ile Leu Gly Thr Asn Asn Phe Ile 
            340                 345                 350         


Ala Leu Ala His Arg Ala Ala Leu Ser Gly Val Thr Gln Gly Phe Met 
        355                 360                 365             


Lys Lys Ala Phe Asn Ser Pro Ile Ala Leu Gly Lys Asn Lys Phe Lys 
    370                 375                 380                 


Glu Leu Gln Thr Pro Val Leu Gly Arg Cys Leu Glu Ala Asp Leu Ala 
385                 390                 395                 400 


Ser Cys Asp Arg Ser Thr Pro Ala Ile Val Arg Trp Phe Ala Ala His 
                405                 410                 415     


Leu Leu Tyr Glu Leu Ala Cys Ala Glu Glu His Leu Pro Ser Tyr Val 
            420                 425                 430         


Leu Asn Cys Cys His Asp Leu Leu Val Thr Gln Ser Gly Ala Val Thr 
        435                 440                 445             


Lys Arg Gly Gly Leu Ser Ser Gly Asp Pro Ile Thr Ser Val Ser Asn 
    450                 455                 460                 


Thr Ile Tyr Ser Leu Val Ile Tyr Ala Gln His Met Val Leu Ser Tyr 
465                 470                 475                 480 


Phe Lys Ser Gly His Pro His Gly Leu Leu Phe Leu Gln Asp Gln Leu 
                485                 490                 495     


Lys Phe Glu Asp Met Leu Lys Val Gln Pro Leu Ile Val Tyr Ser Asp 
            500                 505                 510         


Asp Leu Val Leu Tyr Ala Glu Ser Pro Thr Met Pro Asn Tyr His Trp 
        515                 520                 525             


Trp Val Glu His Leu Asn Leu Met Leu Gly Phe Gln Thr Asp Pro Lys 
    530                 535                 540                 


Lys Thr Thr Ile Thr Asp Ser Pro Ser Phe Leu Gly Cys Arg Ile Met 
545                 550                 555                 560 


Asn Gly Cys Gln Leu Val Pro Asn Arg Asp Arg Ile Leu Ala Ala Leu 
                565                 570                 575     


Ala Tyr His Met Lys Ala Asn Asn Val Ser Glu Tyr Tyr Ala Ser Ala 
            580                 585                 590         


Ala Ala Ile Leu Met Asp Ser Cys Ala Cys Leu Glu Tyr Asp Pro Glu 
        595                 600                 605             


Trp Phe Glu Glu Leu Val Val Gly Met Ala Gln Cys Ala Arg Lys Asp 
    610                 615                 620                 


Gly Tyr Ser Phe Pro Gly Pro Pro Phe Phe Leu Ser Met Trp Glu Lys 
625                 630                 635                 640 


Leu Arg Ser Asn Tyr Glu Gly Lys Arg Ser Arg Val Cys Gly Tyr Cys 
                645                 650                 655     


Gly Ala Ser Ala Pro Tyr Ala Thr Ser Cys Gly Leu Asp Val Cys Val 
            660                 665                 670         


Tyr His Thr His Phe His Gln His Cys Pro Val Ile Ile Trp Cys Gly 
        675                 680                 685             


His Pro Ala Gly Ser Gly Ser Cys Asp Asp Cys Lys Ser Pro Thr Gly 
    690                 695                 700                 


Lys Asp Thr Asn Pro Leu Asp Glu Val Leu Lys Gln Val Pro Tyr Lys 
705                 710                 715                 720 


Pro Pro Arg Thr Val Leu Met His Val Glu Gln Gly Leu Thr Pro Leu 
                725                 730                 735     


Asp Pro Gly Arg Tyr Gln Thr Arg Arg Gly Leu Val Ala Val Arg Arg 
            740                 745                 750         


Gly Ile Arg Gly Asn Glu Val Asp Leu Pro Asp Gly Asp Tyr Ala Ser 
        755                 760                 765             


Thr Ala Leu Leu Pro Thr Cys Lys Glu Ile Asn Met Val Ala Val Ala 
    770                 775                 780                 


Ser Asn Val Leu Arg Ser Arg Phe Ile Ile Gly Pro Pro Gly Ala Gly 
785                 790                 795                 800 


Lys Thr His Trp Leu Leu Gln Gln Val Gln Asp Gly Asp Val Ile Tyr 
                805                 810                 815     


Thr Pro Thr His Gln Thr Met Leu Asp Met Ile Lys Ala Leu Gly Thr 
            820                 825                 830         


Cys Arg Phe Asn Val Pro Ala Gly Thr Thr Leu Gln Phe Pro Ala Pro 
        835                 840                 845             


Ser Arg Thr Gly Pro Trp Val Arg Ile Leu Ala Gly Gly Trp Cys Pro 
    850                 855                 860                 


Gly Lys Asn Ser Phe Leu Asp Glu Ala Ala Tyr Cys Asn His Leu Asp 
865                 870                 875                 880 


Val Leu Arg Leu Leu Ser Lys Thr Thr Leu Thr Cys Leu Gly Asp Phe 
                885                 890                 895     


Lys Gln Leu His Pro Val Gly Phe Asp Ser His Cys Tyr Val Phe Asp 
            900                 905                 910         


Ile Met Pro Gln Thr Gln Leu Lys Thr Ile Trp Arg Phe Gly Gln Asn 
        915                 920                 925             


Ile Cys Asp Ala Ile Gln Pro Asp Tyr Arg Asp Lys Leu Met Ser Met 
    930                 935                 940                 


Val Asn Thr Thr Arg Val Thr Tyr Val Glu Lys Pro Val Lys Tyr Gly 
945                 950                 955                 960 


Gln Val Leu Thr Pro Tyr His Arg Asp Arg Glu Asp Gly Ala Ile Thr 
                965                 970                 975     


Ile Asp Ser Ser Gln Gly Ala Thr Phe Asp Val Val Thr Leu His Leu 
            980                 985                 990         


Pro Thr Lys Asp Ser Leu Asn Lys  Gln Arg Ala Leu Val  Ala Ile Thr 
        995                 1000                 1005             


Arg Ala  Arg His Ala Ile Phe  Val Tyr Asp Pro Tyr  Arg Gln Leu 
    1010                 1015                 1020             


Gln Ser  Leu Phe Asp Leu Pro  Ala Lys Ser Thr Pro  Val Asn Leu 
    1025                 1030                 1035             


Ala Val  His Arg Asp Gly Gln  Leu Ile Val Leu Asp  Arg Asn Asn 
    1040                 1045                 1050             


Lys Glu  Cys Thr Val Ala Gln  Ala Leu Gly Asn Gly  Asp Lys Phe 
    1055                 1060                 1065             


Arg Ala  Thr Asp Lys Arg Val  Val Asp Ser Leu Arg  Ala Ile Cys 
    1070                 1075                 1080             


Ala Asp  Leu Glu Gly Ser Ser  Ser Pro Leu Pro Lys  Val Ala His 
    1085                 1090                 1095             


Asn Leu  Gly Phe Tyr Phe Ser  Pro Asp Leu Thr Gln  Phe Ala Lys 
    1100                 1105                 1110             


Leu Pro  Ile Glu Leu Ala Pro  His Trp Pro Val Val  Thr Thr Gln 
    1115                 1120                 1125             


Asn Asn  Glu Asn Trp Pro Asp  Arg Leu Val Ala Ser  Leu Arg Pro 
    1130                 1135                 1140             


Ile His  Lys Tyr Ser Arg Ala  Cys Ile Gly Ala Gly  Tyr Met Val 
    1145                 1150                 1155             


Gly Pro  Ser Val Phe Leu Gly  Thr Pro Gly Val Val  Ser Tyr Tyr 
    1160                 1165                 1170             


Leu Thr  Lys Phe Val Lys Gly  Glu Ala Gln Val Leu  Pro Glu Thr 
    1175                 1180                 1185             


Val Phe  Ser Thr Gly Arg Ile  Glu Val Asp Cys Arg  Glu Tyr Leu 
    1190                 1195                 1200             


Asp Asp  Arg Glu Arg Glu Val  Ala Ala Ser Leu Pro  His Ala Phe 
    1205                 1210                 1215             


Ile Gly  Asp Val Lys Gly Thr  Thr Val Gly Gly Cys  His His Val 
    1220                 1225                 1230             


Thr Ser  Lys Tyr Leu Pro Arg  Phe Leu Pro Lys Glu  Ser Val Ala 
    1235                 1240                 1245             


Val Val  Gly Val Ser Ser Pro  Gly Lys Ala Ala Lys  Ala Val Cys 
    1250                 1255                 1260             


Thr Leu  Thr Asp Val Tyr Leu  Pro Asp Leu Glu Ala  Tyr Leu His 
    1265                 1270                 1275             


Pro Val  Thr Gln Ser Lys Cys  Trp Lys Met Met Leu  Asp Phe Lys 
    1280                 1285                 1290             


Glu Val  Arg Leu Met Val Trp  Lys Asp Lys Thr Ala  Tyr Phe Gln 
    1295                 1300                 1305             


Leu Glu  Gly Arg His Phe Thr  Trp Tyr Gln Leu Ala  Ser Phe Ala 
    1310                 1315                 1320             


Ser Tyr  Ile Arg Val Pro Val  Asn Ser Thr Val Tyr  Leu Asp Pro 
    1325                 1330                 1335             


Cys Met  Gly Pro Ala Leu Cys  Asn Arg Lys Val Val  Gly Ser Pro 
    1340                 1345                 1350             


His Trp  Gly Ala Asp Leu Ala  Val Thr Pro Tyr Asp  Tyr Gly Ala 
    1355                 1360                 1365             


Arg Lys  Ile Leu Ser Ser Ala  Tyr His Gly Glu Met  Pro Pro Gly 
    1370                 1375                 1380             


Tyr Lys  Ile Leu Ala Cys Ala  Glu Phe Ser Leu Asp  Asp Pro Val 
    1385                 1390                 1395             


Arg Tyr  Lys His Thr Trp Gly  Phe Glu Ser Asp Thr  Ala Tyr Leu 
    1400                 1405                 1410             


Tyr Glu  Phe Thr Gly Asn Gly  Glu Asp Trp Glu Asp  Tyr Asn Asp 
    1415                 1420                 1425             


Ala Phe  Arg Ala Arg Gln Lys  Gly Lys Ile Tyr Lys  Ala Thr Ala 
    1430                 1435                 1440             


Thr Ser  Leu Lys Phe His Phe  Pro Pro Gly His Ile  Val Glu Pro 
    1445                 1450                 1455             


Thr Leu  Gly Leu Asn 
    1460             


<210> 5
<211> 256
<212> PRT
<213> Porcine reproductive and respiratory syndrome virus

<400> 5
Met Arg Trp Glu Pro His Arg Ala Phe Leu Thr Lys Leu Val Asn Phe 
1               5                   10                  15      


Leu Leu Met Pro Ser Arg Ser Ser Trp Cys Leu Leu Leu Ile Ser Ser 
            20                  25                  30          


Tyr Phe Trp Pro Phe Cys Ser Ala Ser Pro Ser Pro Val Gly Trp Trp 
        35                  40                  45              


Ser Phe Ala Ser Asp Trp Phe Ser Pro Arg Tyr Ser Val Arg Ala Leu 
    50                  55                  60                  


Pro Phe Thr Leu Ser Asn Tyr Arg Arg Ser Tyr Glu Ala Tyr Leu Ser 
65                  70                  75                  80  


Gln Cys Gln Val Asp Ile Pro Ala Trp Gly Thr Lys His Pro Leu Gly 
                85                  90                  95      


Met Ile Trp His His Lys Val Ser Thr Leu Ile Asp Glu Met Val Ser 
            100                 105                 110         


Arg Arg Met Tyr Arg Thr Met Glu Gln Ala Gly Gln Ala Ala Trp Lys 
        115                 120                 125             


Gln Val Val Thr Glu Ala Thr Leu Ser Arg Ile Ser Ser Leu Asp Val 
    130                 135                 140                 


Val Ala His Phe Gln His Leu Ala Ala Ile Glu Ala Glu Thr Cys Lys 
145                 150                 155                 160 


Tyr Leu Ala Ser Arg Leu Pro Met Leu His Asn Leu Arg Leu Thr Gly 
                165                 170                 175     


Ser Asn Val Thr Ile Val Tyr Asn Ser Ser Leu Asp Arg Val Phe Ala 
            180                 185                 190         


Val Phe Pro Thr Ser Ser Ser Arg Pro Lys Leu His Asp Phe Arg Gln 
        195                 200                 205             


Trp Leu Ile Ala Val His Ser Ser Ile Phe Ser Ser Val Ala Ala Ser 
    210                 215                 220                 


Cys Thr Leu Phe Val Val Leu Trp Leu Arg Leu Pro Ile Ile Arg Thr 
225                 230                 235                 240 


Val Phe Gly Phe Arg Trp Leu Gly Ala Ile Phe Leu Ser Ser Ser Gln 
                245                 250                 255     


<210> 6
<211> 254
<212> PRT
<213> Porcine reproductive and respiratory syndrome virus

<400> 6
Met Ala Asn Ser Cys Ala Phe Leu His Ile Leu Leu Cys Cys Gly Phe 
1               5                   10                  15      


Leu Tyr Pro Phe Arg Arg Thr Val Val Ala Ala Ser Asn Asn Thr Tyr 
            20                  25                  30          


Cys Phe Trp Phe Pro Leu Val Arg Gly Asn Phe Ser Phe Glu Leu Thr 
        35                  40                  45              


Val Asn Tyr Thr Val Cys Pro Pro Cys Leu Thr Arg Gln Ala Ala Ser 
    50                  55                  60                  


Glu Ile Tyr Glu Pro Ser Arg Ser Leu Trp Cys Arg Ile Gly Gln Asp 
65                  70                  75                  80  


Arg Cys Thr Glu Ser Asp His Asp Glu Leu Gly Phe Leu Val Pro Pro 
                85                  90                  95      


Gly Leu Ser Asn Glu Gly His Leu Ile Ser Val Tyr Ala Trp Leu Ala 
            100                 105                 110         


Phe Leu Ser Phe Ser Tyr Thr Ser Gln Phe His Pro Glu Ile Phe Gly 
        115                 120                 125             


Ile Gly Asn Val Ser Glu Val Tyr Val Asp Ile Lys His Gln Phe Ile 
    130                 135                 140                 


Cys Ala Val His Asp Gly Gln Asn Thr Thr Leu Pro Arg His Asp Asn 
145                 150                 155                 160 


Ile Thr Ala Val Tyr Gln Thr Tyr Tyr Gln His Gln Val Asp Gly Gly 
                165                 170                 175     


Asn Trp Phe His Leu Glu Trp Leu Arg Pro Phe Phe Ser Ser Trp Leu 
            180                 185                 190         


Val Leu Asn Val Ser Trp Phe Leu Arg Arg Ser Pro Ala Ser Arg Val 
        195                 200                 205             


Ser Val Arg Val Phe Gln Thr Ser Lys Pro Thr Pro Pro Gln Leu Gln 
    210                 215                 220                 


Ala Leu Leu Ser Ser Lys Thr Ser Ala Val Leu Gly Met Ala Thr Arg 
225                 230                 235                 240 


Pro Leu Arg Arg Leu Ala Lys Ala Ala Asn Ala Val Arg Arg 
                245                 250                 


<210> 7
<211> 178
<212> PRT
<213> Porcine reproductive and respiratory syndrome virus

<400> 7
Met Ala Ala Ser Leu Leu Phe Phe Leu Val Gly Phe Glu Cys Phe Met 
1               5                   10                  15      


Val Ser Gln Ala Phe Ala Cys Lys Pro Cys Phe Ser Ser Ser Leu Ser 
            20                  25                  30          


Asp Ile Lys Thr Asn Thr Thr Ala Ala Ala Gly Phe Ala Val Leu Gln 
        35                  40                  45              


Asp Ile Ser Cys Leu Arg His Gly Asp Ser Ser Ser Glu Ala Thr Arg 
    50                  55                  60                  


Lys Ser Arg Gln Cys Arg Thr Ala Ile Gly Thr Pro Val Tyr Ile Thr 
65                  70                  75                  80  


Val Thr Ala Asn Val Thr Asp Glu Asn Tyr Leu His Ser Ser Asp Leu 
                85                  90                  95      


Leu Met Leu Ser Ser Cys Leu Phe Tyr Ala Ser Glu Met Ser Glu Lys 
            100                 105                 110         


Gly Phe Lys Val Ile Phe Gly Asn Val Ser Gly Ile Val Ala Val Cys 
        115                 120                 125             


Val Asn Phe Thr Ser Tyr Val Gln His Val Lys Glu Phe Thr Arg Arg 
    130                 135                 140                 


Ser Leu Val Val Asp His Val Arg Leu Leu His Phe Met Thr Pro Glu 
145                 150                 155                 160 


Thr Met Arg Trp Ala Thr Val Leu Ala Cys Leu Phe Ala Ile Leu Leu 
                165                 170                 175     


Ala Ile 
        


<210> 8
<211> 200
<212> PRT
<213> Porcine reproductive and respiratory syndrome virus

<400> 8
Met Leu Gly Lys Cys Leu Thr Ala Gly Cys Cys Ser Gln Leu Leu Phe 
1               5                   10                  15      


Leu Trp Cys Ile Val Pro Phe Cys Phe Val Ala Leu Val Asn Ala Asn 
            20                  25                  30          


Asn Ser Ser Ser Ser His Leu Gln Leu Ile Tyr Asn Leu Thr Ile Cys 
        35                  40                  45              


Glu Leu Asn Gly Thr Asp Trp Leu Asn Arg Lys Phe Asp Trp Ala Val 
    50                  55                  60                  


Glu Thr Phe Val Ile Phe Pro Val Leu Thr His Ile Val Ser Tyr Gly 
65                  70                  75                  80  


Ala Leu Thr Thr Ser His Phe Leu Asp Thr Val Gly Leu Val Thr Val 
                85                  90                  95      


Ser Thr Ala Gly Tyr Tyr His Arg Arg Tyr Val Leu Ser Ser Ile Tyr 
            100                 105                 110         


Ala Val Cys Ala Leu Ala Ala Leu Ile Cys Phe Ala Ile Arg Leu Thr 
        115                 120                 125             


Lys Asn Cys Met Ser Trp Arg Tyr Ser Cys Thr Arg Tyr Thr Asn Phe 
    130                 135                 140                 


Leu Leu Asp Thr Lys Gly Lys Leu Tyr Arg Trp Arg Ser Pro Val Ile 
145                 150                 155                 160 


Ile Glu Lys Gly Gly Lys Ile Glu Val Asn Gly His Leu Ile Asp Leu 
                165                 170                 175     


Lys Arg Val Val Leu Asp Gly Ser Ala Ala Thr Pro Val Thr Lys Val 
            180                 185                 190         


Ser Ala Glu Gln Trp Gly Arg Pro 
        195                 200 


<210> 9
<211> 174
<212> PRT
<213> Porcine reproductive and respiratory syndrome virus

<400> 9
Met Gly Thr Ser Leu Asp Asp Phe Cys Asn Asp Ser Thr Ala Pro Gln 
1               5                   10                  15      


Lys Val Leu Leu Ala Phe Ser Ile Thr Tyr Thr Pro Ile Met Ile Tyr 
            20                  25                  30          


Ala Leu Lys Val Ser Arg Gly Arg Leu Leu Gly Leu Leu His Leu Leu 
        35                  40                  45              


Ile Phe Leu Asn Cys Ala Phe Thr Phe Gly Tyr Met Thr Phe Ala His 
    50                  55                  60                  


Phe Arg Ser Thr Asn Lys Val Ala Leu Thr Met Gly Ala Val Val Ala 
65                  70                  75                  80  


Leu Leu Trp Gly Val Tyr Ser Ala Ile Glu Thr Trp Arg Phe Ile Thr 
                85                  90                  95      


Ser Arg Cys Arg Leu Cys Leu Leu Gly Arg Arg Tyr Ile Leu Ala Pro 
            100                 105                 110         


Ala His His Val Glu Ser Val Ala Gly Phe His Pro Ile Thr Ala Ser 
        115                 120                 125             


Asp Asn His Ala Phe Val Val Arg Arg Pro Gly Ser Thr Thr Val Asn 
    130                 135                 140                 


Gly Thr Leu Val Pro Gly Leu Lys Ser Leu Val Leu Gly Gly Arg Arg 
145                 150                 155                 160 


Ala Val Lys Arg Gly Val Val Asn Leu Val Lys Tyr Ala Lys 
                165                 170                 


<210> 10
<211> 123
<212> PRT
<213> Porcine reproductive and respiratory syndrome virus

<400> 10
Met Pro Asn Asn Asn Gly Lys Gln Gln Lys Arg Lys Lys Gly Asp Gly 
1               5                   10                  15      


Gln Pro Val Asn Gln Leu Cys Gln Met Leu Gly Arg Ile Ile Ala Gln 
            20                  25                  30          


Gln Asn Gln Pro Arg Gly Lys Gly Pro Gly Lys Arg Asn Lys Lys Lys 
        35                  40                  45              


Ser Pro Glu Lys Pro His Phe Pro Leu Ala Thr Glu Asp Asp Val Arg 
    50                  55                  60                  


His His Phe Thr Pro Ser Glu Arg Gln Leu Cys Leu Ser Ser Ile Gln 
65                  70                  75                  80  


Thr Ala Phe Asn Gln Gly Ala Gly Thr Cys Thr Leu Ser Asp Ser Gly 
                85                  90                  95      


Arg Val Ser Tyr Ala Val Glu Phe Ser Leu Pro Thr His His Thr Val 
            100                 105                 110         


Arg Leu Ile Arg Ala Thr Thr Ser Pro Ser Ala 
        115                 120             


<210> 11
<211> 2372
<212> PRT
<213> Porcine reproductive and respiratory syndrome virus

<400> 11
Met Ser Gly Ile Leu Asp Arg Cys Thr Cys Thr Pro Asn Ala Arg Val 
1               5                   10                  15      


Phe Val Ala Asp Gly Gln Val Tyr Cys Thr Arg Cys Leu Ser Ala Arg 
            20                  25                  30          


Thr Leu Leu Pro Leu Asn Leu Gln Val Ser Glu Leu Gly Val Leu Gly 
        35                  40                  45              


Leu Phe Tyr Arg Pro Glu Glu Pro Leu Arg Trp Thr Leu Pro Arg Ala 
    50                  55                  60                  


Phe Pro Thr Val Glu Cys Ser Pro Ala Gly Ala Cys Trp Leu Ser Ala 
65                  70                  75                  80  


Ile Phe Pro Ile Ala Arg Met Thr Ser Gly Asn Leu Asn Phe Gln Gln 
                85                  90                  95      


Arg Ile Val Arg Val Ala Ala Glu Ile Tyr Arg Val Gly Gln Leu Thr 
            100                 105                 110         


Pro Thr Val Leu Lys Asn Leu Gln Val Tyr Glu Arg Gly Cys Arg Trp 
        115                 120                 125             


Tyr Pro Ile Val Gly Pro Val Pro Gly Val Ala Val Tyr Ala Asn Ser 
    130                 135                 140                 


Leu His Val Ser Asp Lys Pro Phe Pro Gly Ala Thr His Val Leu Thr 
145                 150                 155                 160 


Asn Leu Pro Leu Pro Gln Arg Pro Lys Pro Glu Asp Phe Cys Pro Phe 
                165                 170                 175     


Glu Cys Ala Met Ala Val Val Tyr Asp Ile Gly His Asp Ala Val Met 
            180                 185                 190         


Tyr Val Ala Lys Glu Arg Val Ser Trp Ala Pro Arg Gly Gly Glu Lys 
        195                 200                 205             


Gly Lys Phe Glu Thr Val Pro Glu Glu Leu Arg Leu Val Ala Glu Gln 
    210                 215                 220                 


Leu Phe Thr Ser Phe Pro Pro His His Val Val Asp Met Ser Lys Phe 
225                 230                 235                 240 


Ile Phe Thr Ala Pro Asp Cys Gly Ala Ser Met Arg Val Glu Arg Gln 
                245                 250                 255     


Tyr Gly Cys Leu Pro Ala Gly Thr Val Pro Asp Gly Asn Cys Trp Trp 
            260                 265                 270         


Ser Leu Phe Ser Ser Leu Pro Pro Glu Val Gln Cys Arg Glu Ile Arg 
        275                 280                 285             


Arg Ala Thr Gln Phe Gly Tyr Gln Thr Lys His Gly Val Ala Gly Lys 
    290                 295                 300                 


Tyr Leu Gln Arg Arg Leu Gln Ala Asn Gly Leu Arg Ala Val Val Asp 
305                 310                 315                 320 


Ser Asn Gly Pro Ile Val Ile Gln Tyr Phe Ser Val Lys Glu Ser Trp 
                325                 330                 335     


Ile Arg His Val Lys Leu Ala Gly Glu Pro Cys Tyr Pro Gly Phe Glu 
            340                 345                 350         


Asp Leu Leu Arg Ile Arg Val Glu Pro Asn Thr Leu Pro Leu Ser Asp 
        355                 360                 365             


Lys Gly Asp Lys Val Phe Arg Phe Gly Gly His Lys Trp Tyr Gly Ala 
    370                 375                 380                 


Gly Lys Arg Ala Arg Arg Ser Arg Ala Gly Ala Ala Thr Thr Val Ala 
385                 390                 395                 400 


Gly His Ala Ser Pro Val Arg Glu Thr Gln Gln Ala Lys Lys His Glu 
                405                 410                 415     


Ala Ala Ser Ala Asn Lys Ala Glu Leu Leu Glu Arg Tyr Ser Pro Pro 
            420                 425                 430         


Ala Glu Gly Asn Cys Gly Trp His Cys Ile Ser Ala Ile Val Asn Arg 
        435                 440                 445             


Met Val Asn Ser Lys Phe Glu Thr Ala Leu Pro Glu Lys Val Arg Pro 
    450                 455                 460                 


Pro Glu Asp Trp Ala Thr Asp Glu Asp Leu Val Asn Thr Ile Gln Ile 
465                 470                 475                 480 


Leu Arg Leu Pro Ala Ala Leu Asp Arg Asn Gly Val Cys Ala Ser Ala 
                485                 490                 495     


Lys Tyr Val Leu Lys Leu Glu Gly Glu His Trp Thr Val Ser Val Thr 
            500                 505                 510         


Pro Gly Met Pro Pro Ser Leu Leu Pro Leu Glu Cys Val Gln Gly Cys 
        515                 520                 525             


Cys Glu His Lys Gly Ser Leu Arg Ser Pro Asp Ala Val Glu Val Ser 
    530                 535                 540                 


Gly Phe Asp Pro Ala Ser Leu Asp Arg Leu Ala Gly Val Met His Leu 
545                 550                 555                 560 


Pro Ser Ser Ala Ile Pro Ala Ala Leu Ala Glu Leu Ser Gly Asp Pro 
                565                 570                 575     


Asp Arg Pro Val Ser Pro Ala Thr Thr Ala Trp Thr Val Ser Gln Phe 
            580                 585                 590         


Tyr Ala Arg His Ser Gly Gly Glu His Pro Asp Gln Lys Tyr Leu Arg 
        595                 600                 605             


Lys Ile Ile Ser Leu Cys Glu Val Ile Glu Ser Cys Cys Cys Ser Gln 
    610                 615                 620                 


Asn Lys Ile Asn Leu Val Thr Pro Glu Glu Val Lys Thr Lys Ile Asp 
625                 630                 635                 640 


Gln Tyr Leu Ser Gly Ala Ala Ser Leu Glu Glu Cys Leu Ala Arg Leu 
                645                 650                 655     


Glu Lys Ala Arg Pro Pro Ser Val Leu Asp Thr Ser Phe Asp Trp Asp 
            660                 665                 670         


Val Val Leu Pro Gly Val Gly Ala Ala Val Arg Ala Ala Lys Leu Pro 
        675                 680                 685             


Leu Ala Asn Gln Cys His Ala Pro Val Thr Val Val Thr Gln Arg Pro 
    690                 695                 700                 


Ser Leu Lys Phe Gln Pro Arg Lys Ala Glu Ser Val Lys Ser Leu Pro 
705                 710                 715                 720 


Glu Ser Arg Pro Leu Pro Ala Pro Arg Arg Lys Ile Arg Ser Arg Cys 
                725                 730                 735     


Gly Ser Leu Thr Ser Leu Asp Gly Asn Phe Pro Asp Ser Trp Glu Asp 
            740                 745                 750         


Leu Ala Gly Gly Pro Phe His Phe Pro Thr Leu Pro Glu Pro Thr Thr 
        755                 760                 765             


Arg Pro Gly Glu Pro Val Pro Val Pro Ala Pro Arg Lys Thr Val Pro 
    770                 775                 780                 


Arg Leu Val Ser Ser Leu Ile Val Ser Val Pro Val Pro Ala Pro Arg 
785                 790                 795                 800 


Arg Gly Ile Arg Gln Ala Glu Gly Met Asn Leu Val Ala Val Thr Pro 
                805                 810                 815     


Ala Cys Gln Asp Glu Leu Leu Asp Leu Ser Glu Ser Ser Gln Ala Glu 
            820                 825                 830         


His Gly Ala Pro Ser Leu Ala Leu Pro Arg Ser Glu Asp Ala Leu Ala 
        835                 840                 845             


Val Gly Arg Arg Glu Ala Glu Glu Val Leu Ser Glu Ile Ser Gly Met 
    850                 855                 860                 


Pro Asp Asp Ile Arg Leu Val Pro Val Ser Ser Ser Ser Ser Leu Ser 
865                 870                 875                 880 


Ser Val Glu Ile Thr Arg Pro Lys Tyr Ser Ala Gln Ala Ile Ile Asp 
                885                 890                 895     


Ser Gly Gly Pro Cys Cys Gly His Leu Gln Glu Val Lys Glu Lys Cys 
            900                 905                 910         


Leu Asn Val Met Arg Glu Ala Cys Asp Ala Thr Lys Leu Asp Asp Pro 
        915                 920                 925             


Ala Thr Arg Glu Trp Leu Ser Arg Met Trp Asp Arg Val Asp Met Leu 
    930                 935                 940                 


Thr Trp Arg Asn Thr Ser Ile Phe Gln Ala Pro Phe Thr Leu Ala Asp 
945                 950                 955                 960 


Lys Phe Lys Leu Leu Pro Lys Met Ile Leu Glu Thr Pro Pro Pro Tyr 
                965                 970                 975     


Pro Cys Gly Phe Val Met Met Pro Arg Thr Pro Ala Pro Ser Val Gly 
            980                 985                 990         


Ala Glu Ser Asp Leu Thr Val Gly  Ser Val Ala Thr Glu  Asp Val Pro 
        995                 1000                 1005             


Arg Ile  Leu Gly Lys Val Gln  Gly Val Cys Lys Thr  Thr Val His 
    1010                 1015                 1020             


Glu Pro  Leu Ala Pro Phe Ala  Asp Gly Pro Thr Asp  Gly Gln Pro 
    1025                 1030                 1035             


Ala Arg  Glu Pro Arg Thr Gln  Thr Pro Pro Ala Gly  Thr Gly Gly 
    1040                 1045                 1050             


Val Gly  Leu Val Leu Asp Ser  Glu Gly Ser Pro Glu  Leu Thr Asp 
    1055                 1060                 1065             


Ser Pro  Pro Pro Asn Gly Thr  Asp Ala Ser Gly Gly  Gly Pro Leu 
    1070                 1075                 1080             


Tyr Thr  Val Lys Lys Lys Val  Glu Arg Cys Phe Asp  Gln Leu Ser 
    1085                 1090                 1095             


Arg Arg  Val Phe Asp Ile Val  Ser His Leu Pro Val  Phe Phe Ser 
    1100                 1105                 1110             


Arg Leu  Phe Lys Ser Asp Gly  His Tyr Ala Pro Gly  Asp Trp Gly 
    1115                 1120                 1125             


Phe Ala  Ala Phe Thr Leu Leu  Cys Leu Phe Leu Cys  Tyr Ser Tyr 
    1130                 1135                 1140             


Pro Ala  Phe Gly Val Val Pro  Leu Leu Gly Val Phe  Ser Gly Ser 
    1145                 1150                 1155             


Ser Arg  Arg Val Arg Met Gly  Val Phe Gly Cys Trp  Leu Ala Phe 
    1160                 1165                 1170             


Ala Val  Ser Leu Phe Lys Pro  Ala Pro Asp Pro Val  Gly Thr Ala 
    1175                 1180                 1185             


Cys Glu  Phe Asp Ser Pro Glu  Cys Arg Asp Ile Leu  His Ser Phe 
    1190                 1195                 1200             


Glu Leu  Leu Gln Pro Trp Asp  Pro Val Arg Ser Leu  Val Val Gly 
    1205                 1210                 1215             


Pro Val  Gly Leu Gly Leu Ala  Ile Leu Gly Arg Leu  Leu Gly Gly 
    1220                 1225                 1230             


Ala Arg  Tyr Val Trp Leu Phe  Leu Leu Arg Leu Gly  Ile Val Ser 
    1235                 1240                 1245             


Asp Cys  Ile Leu Ala Gly Ala  Tyr Val Leu Ser Gln  Gly Arg Cys 
    1250                 1255                 1260             


Lys Lys  Cys Trp Gly Ser Cys  Ile Arg Thr Ala Pro  Ser Glu Val 
    1265                 1270                 1275             


Ala Phe  Asn Val Phe Pro Phe  Thr Arg Ala Thr Arg  Ser Ser Leu 
    1280                 1285                 1290             


Ile Asp  Leu Cys Asp Arg Phe  Cys Ala Pro Lys Gly  Met Asp Pro 
    1295                 1300                 1305             


Ile Phe  Leu Ala Thr Gly Trp  Arg Gly Cys Trp Ala  Gly Gln Ser 
    1310                 1315                 1320             


Pro Ile  Glu Gln Pro Thr Glu  Lys Pro Ile Ala Phe  Ala Gln Leu 
    1325                 1330                 1335             


Asp Glu  Lys Lys Ile Thr Ala  Lys Thr Val Val Ala  Gln Pro Tyr 
    1340                 1345                 1350             


Asp Pro  Asn Gln Ala Val Lys  Cys Leu Arg Val Leu  Gln Ala Gly 
    1355                 1360                 1365             


Gly Ala  Met Val Ala Glu Ala  Ile Pro Lys Val Val  Lys Val Ser 
    1370                 1375                 1380             


Ala Ile  Pro Phe Arg Ala Pro  Phe Phe Pro Val Gly  Val Lys Val 
    1385                 1390                 1395             


Asp Pro  Glu Cys Arg Val Val  Val Asp Ser Asp Thr  Phe Thr Thr 
    1400                 1405                 1410             


Ala Leu  Arg Ser Gly Tyr Ser  Thr Thr Asn Leu Ile  Leu Gly Val 
    1415                 1420                 1425             


Gly Asp  Phe Ala Gln Leu Asn  Gly Leu Lys Ile Arg  Gln Ile Ser 
    1430                 1435                 1440             


Lys Pro  Ser Gly Gly Gly Pro  His Ile Met Ala Ala  Leu His Val 
    1445                 1450                 1455             


Ala Cys  Ser Met Ala Leu His  Met Leu Val Gly Ile  Tyr Val Thr 
    1460                 1465                 1470             


Thr Val  Gly Ser Cys Gly Ser  Gly Thr Asn Asp Pro  Trp Cys Thr 
    1475                 1480                 1485             


Asn Pro  Phe Ala Val Pro Val  Tyr Gly Pro Gly Ser  Leu Cys Thr 
    1490                 1495                 1500             


Ser Arg  Leu Cys Ile Ser Gln  His Gly Leu Thr Leu  Pro Leu Thr 
    1505                 1510                 1515             


Ala Leu  Val Ala Gly Phe Gly  Ile Gln Glu Val Ala  Leu Val Val 
    1520                 1525                 1530             


Leu Ile  Phe Val Ser Ile Gly  Gly Met Ala His Arg  Leu Ser Cys 
    1535                 1540                 1545             


Lys Ala  Asp Val Leu Cys Ile  Leu Leu Ala Ile Ala  Ser Tyr Val 
    1550                 1555                 1560             


Trp Leu  Pro Leu Thr Trp Leu  Leu Cys Val Phe Pro  Cys Trp Leu 
    1565                 1570                 1575             


Arg Trp  Phe Ser Leu His Pro  Leu Thr Val Thr Trp  Leu Val Phe 
    1580                 1585                 1590             


Phe Leu  Ile Ser Val Asn Met  Pro Ser Gly Val Leu  Ala Leu Val 
    1595                 1600                 1605             


Leu Leu  Ile Ser Leu Trp Leu  Leu Gly Arg Tyr Thr  Asn Val Ala 
    1610                 1615                 1620             


Gly Leu  Val Thr Pro Tyr Asp  Ile His His Tyr Thr  Asn Gly Pro 
    1625                 1630                 1635             


Arg Gly  Val Ala Ala Leu Ala  Thr Ala Pro Asp Gly  Thr Tyr Leu 
    1640                 1645                 1650             


Ala Ala  Val Arg Arg Ala Ala  Leu Thr Gly Arg Thr  Met Leu Phe 
    1655                 1660                 1665             


Thr Pro  Ser Gln Leu Gly Ser  Leu Leu Glu Gly Ala  Phe Arg Thr 
    1670                 1675                 1680             


Gln Lys  Pro Thr Leu Asn Thr  Val Asn Val Val Gly  Ser Ser Met 
    1685                 1690                 1695             


Gly Ser  Gly Gly Val Phe Thr  Ile Asp Gly Lys Ile  Lys Cys Val 
    1700                 1705                 1710             


Thr Ala  Ala His Ile Leu Thr  Gly Asn Ser Ala Arg  Val Ser Gly 
    1715                 1720                 1725             


Val Gly  Phe Asn Gln Met Leu  Asp Phe Asp Val Lys  Gly Asp Phe 
    1730                 1735                 1740             


Ala Ile  Ala Asp Cys Pro Asp  Trp Gln Gly Val Ala  Pro Lys Ser 
    1745                 1750                 1755             


Gln Phe  Cys Glu Asp Gly Trp  Thr Gly Arg Ala Tyr  Trp Leu Thr 
    1760                 1765                 1770             


Ser Ser  Gly Val Glu Pro Gly  Val Ile Gly Arg Gly  Phe Ala Phe 
    1775                 1780                 1785             


Cys Phe  Thr Ala Cys Gly Asp  Ser Gly Ser Pro Val  Ile Thr Glu 
    1790                 1795                 1800             


Ala Gly  Glu Leu Val Gly Val  His Thr Gly Ser Asn  Lys Gln Gly 
    1805                 1810                 1815             


Gly Gly  Ile Val Thr Arg Pro  Ser Gly Gln Phe Cys  Asn Val Thr 
    1820                 1825                 1830             


Pro Thr  Lys Leu Ser Glu Leu  Ser Glu Phe Phe Ala  Gly Pro Arg 
    1835                 1840                 1845             


Val Pro  Leu Gly Asp Val Lys  Val Gly Asn His Ile  Ile Lys Asp 
    1850                 1855                 1860             


Thr Asn  Glu Val Pro Ser Asp  Leu Cys Ala Leu Leu  Ala Ala Lys 
    1865                 1870                 1875             


Pro Glu  Leu Glu Gly Gly Leu  Ser Thr Val Gln Leu  Leu Cys Val 
    1880                 1885                 1890             


Phe Phe  Leu Leu Trp Arg Met  Met Gly His Ala Trp  Thr Pro Leu 
    1895                 1900                 1905             


Val Ala  Val Gly Phe Phe Val  Leu Asn Glu Ile Leu  Pro Ala Val 
    1910                 1915                 1920             


Leu Val  Arg Ser Val Phe Ser  Phe Gly Met Phe Ala  Leu Ser Trp 
    1925                 1930                 1935             


Phe Thr  Pro Trp Ser Ala Gln  Ile Leu Met Ile Arg  Leu Leu Thr 
    1940                 1945                 1950             


Ala Ala  Leu Asn Arg Asn Arg  Trp Ser Leu Ala Phe  Tyr Ser Leu 
    1955                 1960                 1965             


Gly Ala  Leu Thr Gly Phe Ala  Ala Asp Leu Ala Ile  Asn Gln Gly 
    1970                 1975                 1980             


His Ser  Leu His Val Ala Met  Asn Phe Ser Thr Tyr  Ala Phe Leu 
    1985                 1990                 1995             


Pro Arg  Ala Met Ala Val Thr  Ser Pro Val Pro Thr  Ile Ala Cys 
    2000                 2005                 2010             


Gly Val  Val His Leu Leu Ala  Ile Val Leu Tyr Leu  Phe Lys Tyr 
    2015                 2020                 2025             


Arg Ser  Leu His Thr Val Leu  Val Gly Asp Gly Ala  Phe Ser Ala 
    2030                 2035                 2040             


Ala Phe  Phe Leu Arg Tyr Phe  Ala Glu Gly Lys Leu  Arg Glu Gly 
    2045                 2050                 2055             


Val Ser  Gln Ser Cys Gly Met  Asn His Glu Ser Leu  Thr Gly Ala 
    2060                 2065                 2070             


Ile Ala  Ile Arg Leu Asp Asp  Glu Asp Leu Asp Phe  Leu Ile Lys 
    2075                 2080                 2085             


Leu Ser  Asp Phe Lys Cys Phe  Val Ser Ala Ser Asn  Met Arg Asn 
    2090                 2095                 2100             


Ala Ala  Gly Gln Phe Ile Glu  Ala Ala Tyr Ala Lys  Ala Leu Arg 
    2105                 2110                 2115             


Val Glu  Leu Ala Gln Leu Val  Gln Val Asp Lys Val  Arg Gly Val 
    2120                 2125                 2130             


Leu Ala  Lys Leu Glu Ala Phe  Ala Asp Thr Ala Thr  Pro Gln Leu 
    2135                 2140                 2145             


Ser Pro  Gly Asp Ile Val Val  Ala Leu Gly His Thr  Pro Val Gly 
    2150                 2155                 2160             


Ser Ile  Phe Asp Leu Lys Val  Gly Ser Thr Lys His  Thr Leu Gln 
    2165                 2170                 2175             


Ala Ile  Glu Thr Arg Val Leu  Ala Gly Ser Arg Met  Thr Val Ala 
    2180                 2185                 2190             


Arg Val  Val Asp Pro Thr Pro  Ala Pro Pro Pro Val  Pro Val Pro 
    2195                 2200                 2205             


Ile Pro  Leu Pro Pro Lys Val  Leu Glu Asn Gly Pro  Arg Ala Trp 
    2210                 2215                 2220             


Glu Asp  Glu Asp Arg Leu Asn  Lys Lys Arg Arg Arg  Lys Met Glu 
    2225                 2230                 2235             


Ala Val  Gly Ile Tyr Val Met  Asp Gly Lys Lys Tyr  Gln Lys Phe 
    2240                 2245                 2250             


Trp Asp  Gln Asn Ser Gly Asp  Val Phe Tyr Glu Glu  Val His Asp 
    2255                 2260                 2265             


Asn Thr  Asp Ala Trp Glu Cys  Leu Arg Thr Asp Asp  Pro Ala Asp 
    2270                 2275                 2280             


Leu Asp  Pro Glu Lys Gly Thr  Leu Cys Gly His Leu  Thr Ile Glu 
    2285                 2290                 2295             


Asn Arg  Pro Tyr His Val Tyr  Ala Ser Pro Ser Gly  Arg Lys Phe 
    2300                 2305                 2310             


Leu Val  Pro Ala Asn Pro Glu  Ser Gly Lys Ala Gln  Trp Glu Ala 
    2315                 2320                 2325             


Ala Arg  Leu Ser Ile Glu Gln  Ala Leu Gly Met Met  Asn Val Asp 
    2330                 2335                 2340             


Gly Glu  Leu Thr Ala Lys Glu  Val Glu Lys Leu Lys  Arg Ile Ile 
    2345                 2350                 2355             


Asp Lys  Leu Gln Gly Leu Thr  Lys Glu Gln Cys Leu  Asn Tyr 
    2360                 2365                 2370         


<210> 12
<211> 1463
<212> PRT
<213> Porcine reproductive and respiratory syndrome virus

<400> 12
Gly Ala Val Phe Lys Leu Leu Ala Ala Ser Gly Leu Thr Arg Cys Gly 
1               5                   10                  15      


Arg Gly Gly Leu Val Ile Thr Glu Thr Ala Val Lys Ile Val Arg Phe 
            20                  25                  30          


His Ser Arg Thr Phe Thr Leu Gly Pro Val Asn Leu Lys Val Ala Ser 
        35                  40                  45              


Glu Val Glu Leu Lys Asp Ala Val Glu His Asn Gln His Pro Ile Ala 
    50                  55                  60                  


Arg Pro Val Asp Gly Gly Val Val Leu Leu Arg Ser Ala Val Pro Ser 
65                  70                  75                  80  


Leu Ile Asp Val Leu Ile Ser Gly Ala Asp Ala Ser Pro Gln Leu Leu 
                85                  90                  95      


Ala His His Gly Pro Gly Asn Thr Gly Ile Asp Gly Thr Leu Trp Asp 
            100                 105                 110         


Phe Glu Ser Val Ala Thr Lys Glu Glu Val Thr Leu Ser Ala Gln Ile 
        115                 120                 125             


Ile Gln Ala Cys Gly Ile Arg Arg Gly Asp Ala Pro Glu Ile Gly Leu 
    130                 135                 140                 


Pro Tyr Lys Leu His Pro Val Arg Gly Asn Pro Glu Arg Val Lys Gly 
145                 150                 155                 160 


Val Leu Lys Asn Thr Arg Phe Gly Asp Ile Pro Tyr Lys Thr Pro Ser 
                165                 170                 175     


Asp Thr Gly Ser Pro Val His Ala Ala Ala Cys Leu Thr Pro Asn Ala 
            180                 185                 190         


Thr Pro Val Thr Asp Gly Arg Ser Val Leu Ala Thr Thr Met Pro Ser 
        195                 200                 205             


Gly Phe Glu Leu Tyr Val Pro Thr Ile Pro Ala Ser Val Leu Asp Tyr 
    210                 215                 220                 


Leu Asp Ser Arg Pro Asp Cys Pro Lys Gln Leu Thr Glu His Gly Cys 
225                 230                 235                 240 


Glu Asp Ala Ala Leu Arg Asp Leu Ser Lys Tyr Asp Leu Ser Thr Gln 
                245                 250                 255     


Gly Phe Val Leu Pro Gly Val Leu Arg Leu Val Arg Lys Tyr Leu Phe 
            260                 265                 270         


Ala His Val Gly Lys Cys Pro Pro Val His Arg Pro Ser Thr Tyr Pro 
        275                 280                 285             


Ala Lys Asn Ser Met Ala Gly Ile Asn Gly Asn Arg Phe Pro Thr Lys 
    290                 295                 300                 


Asp Ile Gln Ser Ile Pro Glu Ile Asp Val Leu Cys Ala Gln Ala Val 
305                 310                 315                 320 


Arg Glu Asn Trp Gln Thr Val Thr Pro Cys Thr Leu Lys Lys Gln Tyr 
                325                 330                 335     


Cys Gly Lys Lys Lys Thr Arg Thr Ile Leu Gly Thr Asn Asn Phe Ile 
            340                 345                 350         


Ala Leu Ala His Arg Ala Ala Leu Ser Gly Val Thr Gln Gly Phe Met 
        355                 360                 365             


Lys Lys Ala Phe Asn Ser Pro Ile Ala Leu Gly Lys Asn Lys Phe Lys 
    370                 375                 380                 


Glu Leu Gln Thr Pro Val Leu Gly Arg Cys Leu Glu Ala Asp Leu Ala 
385                 390                 395                 400 


Ser Cys Asp Arg Ser Thr Pro Ala Ile Val Arg Trp Phe Ala Ala His 
                405                 410                 415     


Leu Leu Tyr Glu Leu Ala Cys Ala Glu Glu His Leu Pro Ser Tyr Val 
            420                 425                 430         


Leu Asn Cys Cys His Asp Leu Leu Val Thr Gln Ser Gly Ala Val Thr 
        435                 440                 445             


Lys Arg Gly Gly Leu Ser Ser Gly Asp Pro Ile Thr Ser Val Ser Asn 
    450                 455                 460                 


Thr Ile Tyr Ser Leu Val Ile Tyr Ala Gln His Met Val Leu Ser Tyr 
465                 470                 475                 480 


Phe Lys Ser Gly His Pro His Gly Leu Leu Phe Leu Gln Asp Gln Leu 
                485                 490                 495     


Lys Phe Glu Asp Met Leu Lys Val Gln Pro Leu Ile Val Tyr Ser Asp 
            500                 505                 510         


Asp Leu Val Leu Tyr Ala Glu Ser Pro Thr Met Pro Asn Tyr His Trp 
        515                 520                 525             


Trp Val Glu His Leu Asn Leu Met Leu Gly Phe Gln Thr Asp Pro Lys 
    530                 535                 540                 


Lys Thr Thr Ile Thr Asp Ser Pro Ser Phe Leu Gly Cys Arg Ile Met 
545                 550                 555                 560 


Asn Gly Cys Gln Leu Val Pro Asn Arg Asp Arg Ile Leu Ala Ala Leu 
                565                 570                 575     


Ala Tyr His Met Lys Ala Asn Asn Val Ser Glu Tyr Tyr Ala Ser Ala 
            580                 585                 590         


Ala Ala Ile Leu Met Asp Ser Cys Ala Cys Leu Glu Tyr Asp Pro Glu 
        595                 600                 605             


Trp Phe Glu Glu Leu Val Val Gly Met Ala Gln Cys Ala Arg Lys Asp 
    610                 615                 620                 


Gly Tyr Ser Phe Pro Gly Pro Pro Phe Phe Leu Ser Met Trp Glu Lys 
625                 630                 635                 640 


Leu Arg Ser Asn Tyr Glu Gly Lys Arg Ser Arg Val Cys Gly Tyr Cys 
                645                 650                 655     


Gly Ala Ser Ala Pro Tyr Ala Thr Ser Cys Gly Leu Asp Val Cys Val 
            660                 665                 670         


Tyr His Thr His Phe His Gln His Cys Pro Val Ile Ile Trp Cys Gly 
        675                 680                 685             


His Pro Ala Gly Ser Gly Ser Cys Asp Asp Cys Lys Ser Pro Thr Gly 
    690                 695                 700                 


Lys Asp Thr Asn Pro Leu Asp Glu Val Leu Lys Gln Val Pro Tyr Lys 
705                 710                 715                 720 


Pro Pro Arg Thr Val Leu Met His Val Glu Gln Gly Leu Thr Pro Leu 
                725                 730                 735     


Asp Pro Gly Arg Tyr Gln Thr Arg Arg Gly Leu Val Ala Val Arg Arg 
            740                 745                 750         


Gly Ile Arg Gly Asn Glu Val Asp Leu Pro Asp Gly Asp Tyr Ala Ser 
        755                 760                 765             


Thr Ala Leu Leu Pro Thr Cys Lys Glu Ile Asn Met Val Ala Val Ala 
    770                 775                 780                 


Ser Asn Val Leu Arg Ser Arg Phe Ile Ile Gly Pro Pro Gly Ala Gly 
785                 790                 795                 800 


Lys Thr His Trp Leu Leu Gln Gln Val Gln Asp Gly Asp Val Ile Tyr 
                805                 810                 815     


Thr Pro Thr His Gln Thr Met Leu Asp Met Ile Lys Ala Leu Gly Thr 
            820                 825                 830         


Cys Arg Phe Asn Val Pro Ala Gly Thr Thr Leu Gln Phe Pro Ala Pro 
        835                 840                 845             


Ser Arg Thr Gly Pro Trp Val Arg Ile Leu Ala Gly Gly Trp Cys Pro 
    850                 855                 860                 


Gly Lys Asn Ser Phe Leu Asp Glu Ala Ala Tyr Cys Asn His Leu Asp 
865                 870                 875                 880 


Val Leu Arg Leu Leu Ser Lys Thr Thr Leu Thr Cys Leu Gly Asp Phe 
                885                 890                 895     


Lys Gln Leu His Pro Val Gly Phe Asp Ser His Cys Tyr Val Phe Asp 
            900                 905                 910         


Ile Met Pro Gln Thr Gln Leu Lys Thr Ile Trp Arg Phe Gly Gln Asn 
        915                 920                 925             


Ile Cys Asp Ala Ile Gln Pro Asp Tyr Arg Asp Lys Leu Met Ser Met 
    930                 935                 940                 


Val Asn Thr Thr Arg Val Thr Tyr Val Glu Lys Pro Val Lys Tyr Gly 
945                 950                 955                 960 


Gln Val Leu Thr Pro Tyr His Arg Asp Arg Glu Asp Gly Ala Ile Thr 
                965                 970                 975     


Ile Asp Ser Ser Gln Gly Ala Thr Phe Asp Val Val Thr Leu His Leu 
            980                 985                 990         


Pro Thr Lys Asp Ser Leu Asn Lys  Gln Arg Ala Leu Val  Ala Ile Thr 
        995                 1000                 1005             


Arg Ala  Arg His Ala Ile Phe  Val Tyr Asp Pro Tyr  Arg Gln Leu 
    1010                 1015                 1020             


Gln Ser  Leu Phe Gly Leu Pro  Ala Lys Ser Thr Pro  Val Asn Leu 
    1025                 1030                 1035             


Ala Val  His Arg Asp Gly Gln  Leu Ile Val Leu Asp  Arg Asn Asn 
    1040                 1045                 1050             


Lys Glu  Cys Thr Val Ala Gln  Ala Leu Gly Asn Gly  Asp Lys Phe 
    1055                 1060                 1065             


Arg Ala  Thr Asp Lys Arg Val  Val Asp Ser Leu Arg  Ala Ile Cys 
    1070                 1075                 1080             


Ala Asp  Leu Glu Gly Ser Ser  Ser Pro Leu Pro Lys  Val Ala His 
    1085                 1090                 1095             


Asn Leu  Gly Phe Tyr Phe Ser  Pro Asp Leu Thr Gln  Phe Ala Lys 
    1100                 1105                 1110             


Leu Pro  Ile Glu Leu Ala Pro  His Trp Pro Val Val  Thr Thr Gln 
    1115                 1120                 1125             


Asn Asn  Glu Asn Trp Pro Asp  Arg Leu Val Ala Ser  Leu Arg Pro 
    1130                 1135                 1140             


Ile His  Lys Tyr Ser Arg Ala  Cys Ile Gly Ala Gly  Tyr Met Val 
    1145                 1150                 1155             


Gly Pro  Ser Val Phe Leu Gly  Thr Pro Gly Val Val  Ser Tyr Tyr 
    1160                 1165                 1170             


Leu Thr  Lys Phe Val Lys Gly  Glu Ala Gln Val Leu  Pro Glu Thr 
    1175                 1180                 1185             


Val Phe  Ser Thr Gly Arg Ile  Glu Val Asp Cys Arg  Glu Tyr Leu 
    1190                 1195                 1200             


Asp Asp  Trp Glu Arg Glu Val  Ala Ala Ser Leu Pro  His Ala Phe 
    1205                 1210                 1215             


Ile Gly  Asp Val Lys Gly Thr  Thr Val Gly Gly Cys  His His Val 
    1220                 1225                 1230             


Thr Ser  Lys Tyr Leu Pro Arg  Phe Leu Pro Lys Glu  Ser Val Ala 
    1235                 1240                 1245             


Val Val  Gly Val Ser Ser Pro  Gly Lys Ala Ala Lys  Ala Val Cys 
    1250                 1255                 1260             


Thr Leu  Thr Asp Val Tyr Leu  Pro Asp Leu Glu Ala  Tyr Leu His 
    1265                 1270                 1275             


Pro Val  Thr Gln Ser Lys Cys  Trp Lys Met Met Leu  Asp Phe Lys 
    1280                 1285                 1290             


Glu Val  Arg Leu Met Val Trp  Lys Asp Lys Thr Ala  Tyr Phe Gln 
    1295                 1300                 1305             


Leu Glu  Gly Arg His Phe Thr  Trp Tyr Gln Leu Ala  Ser Phe Ala 
    1310                 1315                 1320             


Ser Tyr  Ile Arg Val Pro Val  Asn Ser Thr Val Tyr  Leu Asp Pro 
    1325                 1330                 1335             


Cys Met  Gly Pro Ala Leu Cys  Asn Arg Lys Val Val  Gly Ser Pro 
    1340                 1345                 1350             


His Trp  Gly Ala Asp Leu Ala  Val Thr Pro Tyr Asp  Tyr Gly Ala 
    1355                 1360                 1365             


Arg Lys  Ile Leu Ser Ser Ala  Tyr His Gly Glu Met  Pro Pro Gly 
    1370                 1375                 1380             


Tyr Lys  Ile Leu Ala Cys Ala  Glu Phe Ser Leu Asp  Asp Pro Val 
    1385                 1390                 1395             


Arg Tyr  Lys His Thr Trp Gly  Phe Glu Ser Asp Thr  Ala Tyr Leu 
    1400                 1405                 1410             


Tyr Glu  Phe Thr Gly Asn Gly  Glu Asp Trp Glu Asp  Tyr Asn Asp 
    1415                 1420                 1425             


Ala Phe  Arg Ala Arg Gln Lys  Gly Lys Ile Tyr Lys  Ala Thr Ala 
    1430                 1435                 1440             


Thr Ser  Leu Lys Phe His Phe  Pro Pro Gly His Ile  Val Glu Pro 
    1445                 1450                 1455             


Thr Leu  Gly Leu Asn 
    1460             


<210> 13
<211> 256
<212> PRT
<213> Porcine reproductive and respiratory syndrome virus

<400> 13
Met Arg Trp Glu Pro His Arg Ala Phe Leu Thr Lys Leu Val Asn Phe 
1               5                   10                  15      


Leu Leu Met Pro Ser Arg Ser Ser Trp Cys Leu Leu Leu Ile Ser Ser 
            20                  25                  30          


Tyr Phe Trp Pro Phe Cys Ser Ala Ser Pro Ser Pro Val Gly Trp Trp 
        35                  40                  45              


Ser Phe Ala Ser Asp Trp Phe Ser Pro Arg Tyr Ser Val Arg Ala Leu 
    50                  55                  60                  


Pro Phe Thr Leu Ser Asn Tyr Arg Arg Ser Tyr Glu Ala Tyr Leu Ser 
65                  70                  75                  80  


Gln Cys Gln Val Asp Ile Pro Ala Trp Gly Thr Lys His Pro Leu Gly 
                85                  90                  95      


Met Ile Trp His His Arg Val Ser Thr Leu Ile Asp Glu Met Val Ser 
            100                 105                 110         


Arg Arg Met Tyr Arg Thr Met Glu Gln Ala Gly Gln Ala Ala Trp Lys 
        115                 120                 125             


Gln Val Val Thr Glu Ala Thr Leu Ser Arg Ile Ser Ser Leu Asp Val 
    130                 135                 140                 


Val Ala His Phe Gln His Leu Ala Ala Ile Glu Ala Glu Thr Cys Lys 
145                 150                 155                 160 


Tyr Leu Ala Ser Arg Leu Pro Met Leu His Asn Leu Arg Leu Thr Gly 
                165                 170                 175     


Ser Asn Val Thr Ile Val Tyr Asn Ser Ser Leu Asp Arg Val Phe Ala 
            180                 185                 190         


Val Phe Pro Thr Ser Ser Ser Arg Pro Lys Leu His Asp Phe Arg Gln 
        195                 200                 205             


Trp Leu Ile Ala Val His Ser Ser Ile Phe Ser Ser Val Ala Ala Ser 
    210                 215                 220                 


Cys Thr Leu Phe Val Val Leu Trp Leu Arg Leu Pro Ile Ile Arg Thr 
225                 230                 235                 240 


Val Phe Gly Phe Arg Trp Leu Gly Ala Ile Phe Leu Ser Ser Ser Gln 
                245                 250                 255     


<210> 14
<211> 254
<212> PRT
<213> Porcine reproductive and respiratory syndrome virus

<400> 14
Met Ala Asn Ser Cys Ala Phe Leu His Ile Leu Leu Cys Cys Gly Phe 
1               5                   10                  15      


Leu Tyr Pro Phe Arg Arg Thr Val Val Ala Ala Ser Asn Asn Thr Tyr 
            20                  25                  30          


Cys Phe Trp Phe Pro Leu Val Arg Gly Asn Phe Ser Phe Glu Leu Thr 
        35                  40                  45              


Val Asn Tyr Thr Val Cys Pro Pro Cys Leu Thr Arg Gln Ala Ala Ser 
    50                  55                  60                  


Glu Ile Tyr Glu Pro Ser Arg Ser Leu Trp Cys Arg Ile Gly Gln Asp 
65                  70                  75                  80  


Arg Cys Thr Glu Ser Asp His Asp Glu Leu Gly Phe Leu Val Pro Pro 
                85                  90                  95      


Gly Leu Ser Asn Glu Gly His Leu Ile Ser Val Tyr Ala Trp Leu Ala 
            100                 105                 110         


Phe Leu Ser Phe Ser Tyr Thr Ser Gln Phe His Pro Glu Ile Phe Gly 
        115                 120                 125             


Ile Gly Asn Val Ser Glu Val Tyr Val Asp Ile Lys His Gln Leu Ile 
    130                 135                 140                 


Cys Ala Val His Asp Gly Gln Asn Thr Thr Leu Pro Arg His Asp Asn 
145                 150                 155                 160 


Ile Thr Ala Val Tyr Gln Thr Tyr Tyr Gln His Gln Val Asp Gly Gly 
                165                 170                 175     


Asn Trp Phe His Leu Glu Trp Leu Arg Pro Phe Phe Ser Ser Trp Leu 
            180                 185                 190         


Val Leu Asn Val Ser Trp Phe Leu Arg Arg Ser Pro Ala Ser Arg Val 
        195                 200                 205             


Ser Val Arg Val Phe Gln Thr Ser Lys Pro Thr Pro Pro Gln Leu Gln 
    210                 215                 220                 


Val Leu Leu Ser Ser Lys Thr Ser Ala Val Leu Gly Met Ala Thr Arg 
225                 230                 235                 240 


Pro Leu Arg Arg Leu Ala Lys Ala Ala Asn Ala Val Arg Arg 
                245                 250                 


<210> 15
<211> 200
<212> PRT
<213> Porcine reproductive and respiratory syndrome virus

<400> 15
Met Leu Gly Asn Cys Leu Thr Ala Gly Cys Cys Ser Gln Leu Leu Phe 
1               5                   10                  15      


Leu Trp Cys Ile Val Pro Phe Cys Phe Val Ala Leu Val Asn Ala Asn 
            20                  25                  30          


Asn Ser Ser Ser Ser His Leu Gln Leu Ile Tyr Asn Leu Thr Ile Cys 
        35                  40                  45              


Glu Leu Asn Gly Thr Asp Trp Leu Asn Arg Lys Phe Asp Trp Ala Val 
    50                  55                  60                  


Glu Thr Phe Val Ile Phe Pro Val Leu Thr His Ile Val Ser Tyr Gly 
65                  70                  75                  80  


Ala Leu Thr Thr Ser His Phe Leu Asp Thr Val Gly Leu Val Thr Val 
                85                  90                  95      


Ser Thr Ala Gly Tyr Tyr His Arg Arg Tyr Val Leu Ser Ser Ile Tyr 
            100                 105                 110         


Ala Val Cys Ala Leu Ala Ala Leu Ile Cys Phe Ala Ile Arg Leu Thr 
        115                 120                 125             


Lys Asn Cys Met Ser Trp Arg Tyr Ser Cys Thr Arg Tyr Thr Asn Phe 
    130                 135                 140                 


Leu Leu Asp Thr Lys Gly Lys Leu Tyr Arg Trp Arg Ser Pro Val Ile 
145                 150                 155                 160 


Ile Glu Lys Arg Gly Lys Ile Glu Val Asn Gly His Leu Ile Asp Leu 
                165                 170                 175     


Lys Arg Val Val Leu Asp Gly Ser Ala Ala Thr Pro Val Thr Lys Val 
            180                 185                 190         


Leu Ala Glu Gln Trp Gly Arg Pro 
        195                 200 


<210> 16
<211> 22
<212> DNA
<213> Artificial Sequence

<220>
<221> source
<223> /note="Description of Artificial Sequence: Synthetic
      primer"

<400> 16
ctgcggcctt rgacaggaac gg                                                22


<210> 17
<211> 22
<212> DNA
<213> Artificial Sequence

<220>
<221> source
<223> /note="Description of Artificial Sequence: Synthetic
      primer"

<400> 17
tgtchaccck atcccacatg cg                                                22


<210> 18
<211> 19
<212> DNA
<213> Artificial Sequence

<220>
<221> source
<223> /note="Description of Artificial Sequence: Synthetic
      primer"

<400> 18
gtacggcgat agggacacc                                                    19


<210> 19
<211> 19
<212> DNA
<213> Artificial Sequence

<220>
<221> source
<223> /note="Description of Artificial Sequence: Synthetic
      primer"

<400> 19
ccagaatgta cttgcggcc                                                    19
            


