
                                SEQUENCE LISTING

<110> Universit de Genve

<120> Anti-Mycobacterial Vaccines

<130> 103461PC

<140> To be assigned
<141> 

<160> 13

<170> FastSEQ for Windows Version 4.0

<210> 1
<211> 3104
<212> DNA
<213> Artificial Sequence

<220> 
<223> rLCMV/tPA-Ag85B-TB10.4

<400> 1
gcgcaccggg gatcctaggc tttttggatt gcgctttcct ctagatcaac tgggtgtcag 60
gccctatcct acagaaggat ggatgcaatg aagagagggc tctgctgtgt gctgctgctg 120
tgtggagcag tcttcgtttc gcccagcgag atctccttct cccggccggg gctgccggtc 180
gagtacctgc aggtgccgtc gccgtcgatg ggccgcgaca tcaaggttca gttccagagc 240
ggtgggaaca actcacctgc ggtttatctg ctcgacggcc tgcgcgccca agacgactac 300
aacggctggg atatcaacac cccggcgttc gagtggtact accagtcggg actgtcgata 360
gtcatgccgg tcggcgggca gtccagcttc tacagcgact ggtacagccc ggcctgcggt 420
aaggctggct gccagactta caagtgggaa accttcctga ccagcgagct gccgcaatgg 480
ttgtccgcca acagggccgt gaagcccacc ggcagcgctg caatcggctt gtcgatggcc 540
ggctcgtcgg caatgatctt ggccgcctac cacccccagc agttcatcta cgccggctcg 600
ctgtcggccc tgctggaccc ctctcagggg atggggccta gcctgatcgg cctcgcgatg 660
ggtgacgccg gcggttacaa ggccgcagac atgtggggtc cctcgagtga cccggcatgg 720
gagcgcaacg accctacgca gcagatcccc aagctggtcg caaacaacac ccggctatgg 780
gtttattgcg ggaacggcac cccgaacgag ttgggcggtg ccaacatacc cgccgagttc 840
ttggagaact tcgttcgtag cagcaacctg aagttccagg atgcgtacaa cgccgcgggc 900
gggcacaacg ccgtgttcaa cttcccgccc aacggcacgc acagctggga gtactggggc 960
gctcagctca acgccatgaa gggtgacctg cagagttcgt taggcgccgg catgtcgcaa 1020
atcatgtaca actaccccgc gatgttgggt cacgccgggg atatggccgg atatgccggc 1080
acgctgcaga gcttgggtgc cgagatcgcc gtggagcagg ccgcgttgca gagtgcgtgg 1140
cagggcgata ccgggatcac gtatcaggcg tggcaggcac agtggaacca ggccatggaa 1200
gatttggtgc gggcctatca tgcgatgtcc agcacccatg aagccaacac catggcgatg 1260
atggcccgcg acacggccga agccgccaaa tggggcggct gaagaacagc gcctccctga 1320
ctctccacct cgaaagaggt ggagagtcag ggaggcccag agggtcttag agtgtcacaa 1380
catttgggcc tctaaaaatt aggtcatgtg gcagaatgtt gtgaacagtt ttcagatctg 1440
ggagccttgc tttggaggcg ctttcaaaaa tgatgcagtc catgagtgca cagtgcgggg 1500
tgatctcttt cttctttttg tcccttacta ttccagtatg catcttacac aaccagccat 1560
atttgtccca cactttatct tcatactccc tcgaagcttc cctggtcatt tcaacatcga 1620
taagcttaat gtccttccta ttttgtgagt ccagaagctt tctgatgtca tcggagcctt 1680
gacagcttag aaccatcccc tgcggaagag cacctataac tgacgaggtc aacccgggtt 1740
gcgcattgaa gaggtcggca agatccatgc cgtgtgagta cttggaatct tgcttgaatt 1800
gtttttgatc aacgggttcc ctgtaaaagt gtatgaactg ccctgactgt ggttggaaaa 1860
ttgctatttc cactggatca ttaaatctac cctcaatgtc aatccatgta ggagcgttgg 1920
ggtcaattcc tcccatgagg tcttttaaaa gcattgtctg gctgtagctt aagcccacct 1980
gaggtggacc tgctgctcca ggcgctggcc tgggtgagtt gactgcaggt ttctcgcttg 2040
tgagatcaat tgttgtgttt tcccatgctc tccccacaat cgatgttcta caagctatgt 2100
atggccatcc ttcacctgaa aggcaaactt tatagaggat gttttcataa gggttcctgt 2160
ccccaacttg gtctgaaaca aacatgttga gttttctctt ggccccgaga actgccttca 2220
agagatcctc gctgttgctt ggcttgatca aaattgactc taacatgtta cccccatcca 2280
acagggctgc ccctgccttc acggcagcac caagactaaa gttatagcca gaaatgttga 2340
tgctggactg ctgttcagtg atgaccccca gaactgggtg cttgtctttc agcctttcaa 2400
gatcattaag atttggatac ttgactgtgt aaagcaagcc aaggtctgtg agcgcttgta 2460
caacgtcatt gagcggagtc tgtgactgtt tggccataca agccatagtt agacttggca 2520
ttgtgccaaa ttgattgttc aaaagtgatg agtctttcac atcccaaact cttaccacac 2580
cacttgcacc ctgctgaggc tttctcatcc caactatctg taggatctga gatctttggt 2640
ctagttgctg tgttgttaag ttccccatat atacccctga agcctggggc ctttcagacc 2700
tcatgatctt ggccttcagc ttctcaaggt cagccgcaag agacatcagt tcttctgcac 2760
tgagcctccc cactttcaaa acattcttct ttgatgttga ctttaaatcc acaagagaat 2820
gtacagtctg gttgagactt ctgagtctct gtaggtcttt gtcatctctc ttttccttcc 2880
tcatgatcct ctgaacattg ctgacctcag agaagtccaa cccattcaga aggttggttg 2940
catccttaat gacagcagcc ttcacatctg atgtgaagct ctgcaattct cttctcaatg 3000
cttgcgtcca ttggaagctc ttaacttcct tagacaagga catcttgttg ctcaatggtt 3060
tctcaagaca aatgcgcaat caaatgccta ggatccactg tgcg                  3104

<210> 2
<211> 1224
<212> DNA
<213> Artificial Sequence

<220> 
<223> tPA-Ag85B-TB10.4 cDNA sequence

<400> 2
atggatgcaa tgaagagagg gctctgctgt gtgctgctgc tgtgtggagc agtcttcgtt 60
tcgcccagcg agatctcctt ctcccggccg gggctgccgg tcgagtacct gcaggtgccg 120
tcgccgtcga tgggccgcga catcaaggtt cagttccaga gcggtgggaa caactcacct 180
gcggtttatc tgctcgacgg cctgcgcgcc caagacgact acaacggctg ggatatcaac 240
accccggcgt tcgagtggta ctaccagtcg ggactgtcga tagtcatgcc ggtcggcggg 300
cagtccagct tctacagcga ctggtacagc ccggcctgcg gtaaggctgg ctgccagact 360
tacaagtggg aaaccttcct gaccagcgag ctgccgcaat ggttgtccgc caacagggcc 420
gtgaagccca ccggcagcgc tgcaatcggc ttgtcgatgg ccggctcgtc ggcaatgatc 480
ttggccgcct accaccccca gcagttcatc tacgccggct cgctgtcggc cctgctggac 540
ccctctcagg ggatggggcc tagcctgatc ggcctcgcga tgggtgacgc cggcggttac 600
aaggccgcag acatgtgggg tccctcgagt gacccggcat gggagcgcaa cgaccctacg 660
cagcagatcc ccaagctggt cgcaaacaac acccggctat gggtttattg cgggaacggc 720
accccgaacg agttgggcgg tgccaacata cccgccgagt tcttggagaa cttcgttcgt 780
agcagcaacc tgaagttcca ggatgcgtac aacgccgcgg gcgggcacaa cgccgtgttc 840
aacttcccgc ccaacggcac gcacagctgg gagtactggg gcgctcagct caacgccatg 900
aagggtgacc tgcagagttc gttaggcgcc ggcatgtcgc aaatcatgta caactacccc 960
gcgatgttgg gtcacgccgg ggatatggcc ggatatgccg gcacgctgca gagcttgggt 1020
gccgagatcg ccgtggagca ggccgcgttg cagagtgcgt ggcagggcga taccgggatc 1080
acgtatcagg cgtggcaggc acagtggaac caggccatgg aagatttggt gcgggcctat 1140
catgcgatgt ccagcaccca tgaagccaac accatggcga tgatggcccg cgacacggcc 1200
gaagccgcca aatggggcgg ctga                                        1224

<210> 3
<211> 407
<212> PRT
<213> Artificial Sequence

<220> 
<223> tPA-Ag85B-TB10.4 amino acid sequence

<400> 3
Met Asp Ala Met Lys Arg Gly Leu Cys Cys Val Leu Leu Leu Cys Gly
 1               5                  10                  15      
Ala Val Phe Val Ser Pro Ser Glu Ile Ser Phe Ser Arg Pro Gly Leu
            20                  25                  30          
Pro Val Glu Tyr Leu Gln Val Pro Ser Pro Ser Met Gly Arg Asp Ile
        35                  40                  45              
Lys Val Gln Phe Gln Ser Gly Gly Asn Asn Ser Pro Ala Val Tyr Leu
    50                  55                  60                  
Leu Asp Gly Leu Arg Ala Gln Asp Asp Tyr Asn Gly Trp Asp Ile Asn
65                  70                  75                  80  
Thr Pro Ala Phe Glu Trp Tyr Tyr Gln Ser Gly Leu Ser Ile Val Met
                85                  90                  95      
Pro Val Gly Gly Gln Ser Ser Phe Tyr Ser Asp Trp Tyr Ser Pro Ala
            100                 105                 110         
Cys Gly Lys Ala Gly Cys Gln Thr Tyr Lys Trp Glu Thr Phe Leu Thr
        115                 120                 125             
Ser Glu Leu Pro Gln Trp Leu Ser Ala Asn Arg Ala Val Lys Pro Thr
    130                 135                 140                 
Gly Ser Ala Ala Ile Gly Leu Ser Met Ala Gly Ser Ser Ala Met Ile
145                 150                 155                 160 
Leu Ala Ala Tyr His Pro Gln Gln Phe Ile Tyr Ala Gly Ser Leu Ser
                165                 170                 175     
Ala Leu Leu Asp Pro Ser Gln Gly Met Gly Pro Ser Leu Ile Gly Leu
            180                 185                 190         
Ala Met Gly Asp Ala Gly Gly Tyr Lys Ala Ala Asp Met Trp Gly Pro
        195                 200                 205             
Ser Ser Asp Pro Ala Trp Glu Arg Asn Asp Pro Thr Gln Gln Ile Pro
    210                 215                 220                 
Lys Leu Val Ala Asn Asn Thr Arg Leu Trp Val Tyr Cys Gly Asn Gly
225                 230                 235                 240 
Thr Pro Asn Glu Leu Gly Gly Ala Asn Ile Pro Ala Glu Phe Leu Glu
                245                 250                 255     
Asn Phe Val Arg Ser Ser Asn Leu Lys Phe Gln Asp Ala Tyr Asn Ala
            260                 265                 270         
Ala Gly Gly His Asn Ala Val Phe Asn Phe Pro Pro Asn Gly Thr His
        275                 280                 285             
Ser Trp Glu Tyr Trp Gly Ala Gln Leu Asn Ala Met Lys Gly Asp Leu
    290                 295                 300                 
Gln Ser Ser Leu Gly Ala Gly Met Ser Gln Ile Met Tyr Asn Tyr Pro
305                 310                 315                 320 
Ala Met Leu Gly His Ala Gly Asp Met Ala Gly Tyr Ala Gly Thr Leu
                325                 330                 335     
Gln Ser Leu Gly Ala Glu Ile Ala Val Glu Gln Ala Ala Leu Gln Ser
            340                 345                 350         
Ala Trp Gln Gly Asp Thr Gly Ile Thr Tyr Gln Ala Trp Gln Ala Gln
        355                 360                 365             
Trp Asn Gln Ala Met Glu Asp Leu Val Arg Ala Tyr His Ala Met Ser
    370                 375                 380                 
Ser Thr His Glu Ala Asn Thr Met Ala Met Met Ala Arg Asp Thr Ala
385                 390                 395                 400 
Glu Ala Ala Lys Trp Gly Gly
                405         


<210> 4
<211> 1146
<212> DNA
<213> Artificial Sequence

<220> 
<223> Ag85B-TB10.4 cDNA sequence

<400> 4
atgtcccggc cggggctgcc ggtcgagtac ctgcaggtgc cgtcgccgtc gatgggccgc 60
gacatcaagg ttcagttcca gagcggtggg aacaactcac ctgcggttta tctgctcgac 120
ggcctgcgcg cccaagacga ctacaacggc tgggatatca acaccccggc gttcgagtgg 180
tactaccagt cgggactgtc gatagtcatg ccggtcggcg ggcagtccag cttctacagc 240
gactggtaca gcccggcctg cggtaaggct ggctgccaga cttacaagtg ggaaaccttc 300
ctgaccagcg agctgccgca atggttgtcc gccaacaggg ccgtgaagcc caccggcagc 360
gctgcaatcg gcttgtcgat ggccggctcg tcggcaatga tcttggccgc ctaccacccc 420
cagcagttca tctacgccgg ctcgctgtcg gccctgctgg acccctctca ggggatgggg 480
cctagcctga tcggcctcgc gatgggtgac gccggcggtt acaaggccgc agacatgtgg 540
ggtccctcga gtgacccggc atgggagcgc aacgacccta cgcagcagat ccccaagctg 600
gtcgcaaaca acacccggct atgggtttat tgcgggaacg gcaccccgaa cgagttgggc 660
ggtgccaaca tacccgccga gttcttggag aacttcgttc gtagcagcaa cctgaagttc 720
caggatgcgt acaacgccgc gggcgggcac aacgccgtgt tcaacttccc gcccaacggc 780
acgcacagct gggagtactg gggcgctcag ctcaacgcca tgaagggtga cctgcagagt 840
tcgttaggcg ccggcatgtc gcaaatcatg tacaactacc ccgcgatgtt gggtcacgcc 900
ggggatatgg ccggatatgc cggcacgctg cagagcttgg gtgccgagat cgccgtggag 960
caggccgcgt tgcagagtgc gtggcagggc gataccggga tcacgtatca ggcgtggcag 1020
gcacagtgga accaggccat ggaagatttg gtgcgggcct atcatgcgat gtccagcacc 1080
catgaagcca acaccatggc gatgatggcc cgcgacacgg ccgaagccgc caaatggggc 1140
ggctga                                                            1146

<210> 5
<211> 381
<212> PRT
<213> Artificial Sequence

<220> 
<223> Ag85B-TB10.4 amino acid sequence

<400> 5
Met Ser Arg Pro Gly Leu Pro Val Glu Tyr Leu Gln Val Pro Ser Pro
 1               5                  10                  15      
Ser Met Gly Arg Asp Ile Lys Val Gln Phe Gln Ser Gly Gly Asn Asn
            20                  25                  30          
Ser Pro Ala Val Tyr Leu Leu Asp Gly Leu Arg Ala Gln Asp Asp Tyr
        35                  40                  45              
Asn Gly Trp Asp Ile Asn Thr Pro Ala Phe Glu Trp Tyr Tyr Gln Ser
    50                  55                  60                  
Gly Leu Ser Ile Val Met Pro Val Gly Gly Gln Ser Ser Phe Tyr Ser
65                  70                  75                  80  
Asp Trp Tyr Ser Pro Ala Cys Gly Lys Ala Gly Cys Gln Thr Tyr Lys
                85                  90                  95      
Trp Glu Thr Phe Leu Thr Ser Glu Leu Pro Gln Trp Leu Ser Ala Asn
            100                 105                 110         
Arg Ala Val Lys Pro Thr Gly Ser Ala Ala Ile Gly Leu Ser Met Ala
        115                 120                 125             
Gly Ser Ser Ala Met Ile Leu Ala Ala Tyr His Pro Gln Gln Phe Ile
    130                 135                 140                 
Tyr Ala Gly Ser Leu Ser Ala Leu Leu Asp Pro Ser Gln Gly Met Gly
145                 150                 155                 160 
Pro Ser Leu Ile Gly Leu Ala Met Gly Asp Ala Gly Gly Tyr Lys Ala
                165                 170                 175     
Ala Asp Met Trp Gly Pro Ser Ser Asp Pro Ala Trp Glu Arg Asn Asp
            180                 185                 190         
Pro Thr Gln Gln Ile Pro Lys Leu Val Ala Asn Asn Thr Arg Leu Trp
        195                 200                 205             
Val Tyr Cys Gly Asn Gly Thr Pro Asn Glu Leu Gly Gly Ala Asn Ile
    210                 215                 220                 
Pro Ala Glu Phe Leu Glu Asn Phe Val Arg Ser Ser Asn Leu Lys Phe
225                 230                 235                 240 
Gln Asp Ala Tyr Asn Ala Ala Gly Gly His Asn Ala Val Phe Asn Phe
                245                 250                 255     
Pro Pro Asn Gly Thr His Ser Trp Glu Tyr Trp Gly Ala Gln Leu Asn
            260                 265                 270         
Ala Met Lys Gly Asp Leu Gln Ser Ser Leu Gly Ala Gly Met Ser Gln
        275                 280                 285             
Ile Met Tyr Asn Tyr Pro Ala Met Leu Gly His Ala Gly Asp Met Ala
    290                 295                 300                 
Gly Tyr Ala Gly Thr Leu Gln Ser Leu Gly Ala Glu Ile Ala Val Glu
305                 310                 315                 320 
Gln Ala Ala Leu Gln Ser Ala Trp Gln Gly Asp Thr Gly Ile Thr Tyr
                325                 330                 335     
Gln Ala Trp Gln Ala Gln Trp Asn Gln Ala Met Glu Asp Leu Val Arg
            340                 345                 350         
Ala Tyr His Ala Met Ser Ser Thr His Glu Ala Asn Thr Met Ala Met
        355                 360                 365             
Met Ala Arg Asp Thr Ala Glu Ala Ala Lys Trp Gly Gly
    370                 375                 380     


<210> 6
<211> 81
<212> DNA
<213> Artificial Sequence

<220> 
<223> tPA cDNA Sequence

<400> 6
atggatgcaa tgaagagagg gctctgctgt gtgctgctgc tgtgtggagc agtcttcgtt 60
tcgcccagcg agatctcctt c                                           81

<210> 7
<211> 27
<212> PRT
<213> Artificial Sequence

<220> 
<223> tPA amino acid sequence

<400> 7
Met Asp Ala Met Lys Arg Gly Leu Cys Cys Val Leu Leu Leu Cys Gly
 1               5                  10                  15      
Ala Val Phe Val Ser Pro Ser Glu Ile Ser Phe
            20                  25          


<210> 8
<211> 20
<212> PRT
<213> Artificial Sequence

<220> 
<223> Antigenic peptide sequence

<400> 8
Thr His Ser Trp Glu Tyr Trp Gly Ala Gln Leu Asn Ala Met Lys Gly
 1               5                  10                  15      
Asp Leu Gln Ser
            20  


<210> 9
<211> 8
<212> PRT
<213> Artificial Sequence

<220> 
<223> Antigenic peptide sequence

<400> 9
Ile Met Tyr Asn Tyr Pro Ala Met
 1               5              


<210> 10
<211> 9
<212> PRT
<213> Artificial Sequence

<220> 
<223> Antigenic peptide sequence

<400> 10
Gln Ile Met Tyr Asn Tyr Pro Ala Met
 1               5                  


<210> 11
<211> 3376
<212> DNA
<213> Lymphocytic choriomeningitis virus 

<220> 
<223> Lymphocytic choriomeningitis virus segment S, complete sequence

<400> 11
cgcaccgggg atcctaggct ttttggattg cgctttcctc tagatcaact gggtgtcagg 60
ccctatccta cagaaggatg ggtcagattg tgacaatgtt tgaggctctg cctcacatca 120
tcgatgaggt gatcaacatt gtcattattg tgcttatcgt gatcacgggt atcaaggctg 180
tctacaattt tgccacctgt gggatattcg cattgatcag tttcctactt ctggctggca 240
ggtcctgtgg catgtacggt cttaagggac ccgacattta caaaggagtt taccaattta 300
agtcagtgga gtttgatatg tcacatctga acctgaccat gcccaacgca tgttcagcca 360
acaactccca ccattacatc agtatgggga cttctggact agaattgacc ttcaccaatg 420
attccatcat cagtcacaac ttttgcaatc tgacctctgc cttcaacaaa aagacctttg 480
accacacact catgagtata gtttcgagcc tacacctcag tatcagaggg aactccaact 540
ataaggcagt atcctgcgac ttcaacaatg gcataaccat ccaatacaac ttgacattct 600
cagatcgaca aagtgctcag agccagtgta gaaccttcag aggtagagtc ctagatatgt 660
ttagaactgc cttcgggggg aaatacatga ggagtggctg gggctggaca ggctcagatg 720
gcaagaccac ctggtgtagc cagacgagtt accaatacct gattatacaa aatagaacct 780
gggaaaacca ctgcacatat gcaggtcctt ttgggatgtc caggattctc ctttcccaag 840
agaagactaa gttcttcact aggagactag cgggcacatt cacctggact ttgtcagact 900
cttcaggggt ggagaatcca ggtggttatt gcctgaccaa atggatgatt cttgctgcag 960
agcttaagtg tttcgggaac acagcagttg cgaaatgcaa tgtaaatcat gatgccgaat 1020
tctgtgacat gctgcgacta attgactaca acaaggctgc tttgagtaag ttcaaagagg 1080
acgtagaatc tgccttgcac ttattcaaaa caacagtgaa ttctttgatt tcagatcaac 1140
tactgatgag gaaccacttg agagatctga tgggggtgcc atattgcaat tactcaaagt 1200
tttggtacct agaacatgca aagaccggcg aaactagtgt ccccaagtgc tggcttgtca 1260
ccaatggttc ttacttaaat gagacccact tcagtgatca aatcgaacag gaagccgata 1320
acatgattac agagatgttg aggaaggatt acataaagag gcaggggagt acccccctag 1380
cattgatgga ccttctgatg ttttccacat ctgcatatct agtcagcatc ttcctgcacc 1440
ttgtcaaaat accaacacac aggcacataa aaggtggctc atgtccaaag ccacaccgat 1500
taaccaacaa aggaatttgt agttgtggtg catttaaggt gcctggtgta aaaaccgtct 1560
ggaaaagacg ctgaagaaca gcgcctccct gactctccac ctcgaaagag gtggagagtc 1620
agggaggccc agagggtctt agagtgtcac aacatttggg cctctaaaaa ttaggtcatg 1680
tggcagaatg ttgtgaacag ttttcagatc tgggagcctt gctttggagg cgctttcaaa 1740
aatgatgcag tccatgagtg cacagtgcgg ggtgatctct ttcttctttt tgtcccttac 1800
tattccagta tgcatcttac acaaccagcc atatttgtcc cacactttgt cttcatactc 1860
cctcgaagct tccctggtca tttcaacatc gataagctta atgtccttcc tattctgtga 1920
gtccagaagc tttctgatgt catcggagcc ttgacagctt agaaccatcc cctgcggaag 1980
agcacctata actgacgagg tcaacccggg ttgcgcattg aagaggtcgg caagatccat 2040
gccgtgtgag tacttggaat cttgcttgaa ttgtttttga tcaacgggtt ccctgtaaaa 2100
gtgtatgaac tgcccgttct gtggttggaa aattgctatt tccactggat cattaaatct 2160
accctcaatg tcaatccatg taggagcgtt ggggtcaatt cctcccatga ggtcttttaa 2220
aagcattgtc tggctgtagc ttaagcccac ctgaggtgga cctgctgctc caggcgctgg 2280
cctgggtgaa ttgactgcag gtttctcgct tgtgagatca attgttgtgt tttcccatgc 2340
tctccccaca atcgatgttc tacaagctat gtatggccat ccttcacctg aaaggcaaac 2400
tttatagagg atgttttcat aagggttcct gtccccaact tggtctgaaa caaacatgtt 2460
gagttttctc ttggccccga gaactgcctt caagaggtcc tcgctgttgc ttggcttgat 2520
caaaattgac tctaacatgt tacccccatc caacagggct gcccctgcct tcacggcagc 2580
accaagacta aagttatagc cagaaatgtt gatgctggac tgctgttcag tgatgacccc 2640
cagaactggg tgcttgtctt tcagcctttc aagatcatta agatttggat acttgactgt 2700
gtaaagcaag ccaaggtctg tgagcgcttg tacaacgtca ttgagcggag tctgtgactg 2760
tttggccata caagccatag ttagacttgg cattgtgcca aattgattgt tcaaaagtga 2820
tgagtctttc acatcccaaa ctcttaccac accacttgca ccctgctgag gctttctcat 2880
cccaactatc tgtaggatct gagatctttg gtctagttgc tgtgttgtta agttccccat 2940
atatacccct gaagcctggg gcctttcaga cctcatgatc ttggccttca gcttctcaag 3000
gtcagccgca agagacatca gttcttctgc actgagcctc cccactttca aaacattctt 3060
ctttgatgtt gactttaaat ccacaagaga atgtacagtc tggttgagac ttctgagtct 3120
ctgtaggtct ttgtcatctc tcttttcctt cctcatgatc ctctgaacat tgctgacctc 3180
agagaagtcc aacccattca gaaggttggt tgcatcctta atgacagcag ccttcacatc 3240
tgatgtgaag ctctgcaatt ctcttctcaa tgcttgcgtc cattggaagc tcttaacttc 3300
cttagacaag gacatcttgt tgctcaatgg tttctcaaga caaatgcgca atcaaatgcc 3360
taggatccac tgtgcg                                                 3376


<210> 12
<211> 3377
<212> DNA
<213> Lymphocytic choriomeningitis virus 

<220> 
<223> Lymphocytic choriomeningitis virus segment S, complete sequence

<400> 12
gcgcaccggg gatcctaggc tttttggatt gcgctttcct ctagatcaac tgggtgtcag 60
gccctatcct acagaaggat gggtcagatt gtgacaatgt ttgaggctct gcctcacatc 120
atcgatgagg tgatcaacat tgtcattatt gtgcttatcg tgatcacggg tatcaaggct 180
gtctacaatt ttgccacctg tgggatattc gcattgatca gtttcctact tctggctggc 240
aggtcctgtg gcatgtacgg tcttaaggga cccgacattt acaaaggagt ttaccaattt 300
aagtcagtgg agtttgatat gtcacatctg aacctgacca tgcccaacgc atgttcagcc 360
aacaactccc accattacat cagtatgggg acttctggac tagaattgac cttcaccaat 420
gattccatca tcagtcacaa cttttgcaat ctgacctctg ccttcaacaa aaagaccttt 480
gaccacacac tcatgagtat agtttcgagc ctacacctca gtatcagagg gaactccaac 540
tataaggcag tatcctgcga cttcaacaat ggcataacca tccaatacaa cttgacattc 600
tcagatgcac aaagtgctca gagccagtgt agaaccttca gaggtagagt cctagatatg 660
tttagaactg ccttcggggg gaaatacatg aggagtggct ggggctggac aggctcagat 720
ggcaagacca cctggtgtag ccagacgagt taccaatacc tgattataca aaatagaacc 780
tgggaaaacc actgcacata tgcaggtcct tttgggatgt ccaggattct cctttcccaa 840
gagaagacta agttcctcac taggagacta gcgggcacat tcacctggac tttgtcagac 900
tcttcagggg tggagaatcc aggtggttat tgcctgacca aatggatgat tcttgctgca 960
gagcttaagt gtttcgggaa cacagcagtt gcgaaatgca atgtaaatca tgatgaagaa 1020
ttctgtgaca tgctgcgact aattgactac aacaaggctg ctttgagtaa gttcaaagag 1080
gacgtagaat ctgccttgca cttattcaaa acaacagtga attctttgat ttcagatcaa 1140
ctactgatga ggaaccactt gagagatctg atgggggtgc catattgcaa ttactcaaag 1200
ttttggtacc tagaacatgc aaagaccggc gaaactagtg tccccaagtg ctggcttgtc 1260
accaatggtt cttacttaaa tgagacccac ttcagtgacc aaatcgaaca ggaagccgat 1320
aacatgatta cagagatgtt gaggaaggat tacataaaga ggcaggggag taccccccta 1380
gcattgatgg accttctgat gttttccaca tctgcatatc tagtcagcat cttcctgcac 1440
cttgtcaaaa taccaacaca caggcacata aaaggtggct catgtccaaa gccacaccga 1500
ttaaccaaca aaggaatttg tagttgtggt gcatttaagg tgcctggtgt aaaaaccgtc 1560
tggaaaagac gctgaagaac agcgcctccc tgactctcca cctcgaaaga ggtggagagt 1620
cagggaggcc cagagggtct tagagtgtca caacatttgg gcctctaaaa attaggtcat 1680
gtggcagaat gttgtgaaca gttttcagat ctgggagcct tgctttggag gcgctttcaa 1740
aaatgatgca gtccatgagt gcacagtgcg gggtgatctc tttcttcttt ttgtccctta 1800
ctattccagt atgcatctta cacaaccagc catatttgtc ccacactttg tcttcatact 1860
ccctcgaagc ttccctggtc atttcaacat cgataagctt aatgtccttc ctattctgtg 1920
agtccagaag ctttctgatg tcatcggagc cttgacagct tagaaccatc ccctgcggaa 1980
gagcacctat aactgacgag gtcaacccgg gttgcgcatt gaagaggtcg gcaagatcca 2040
tgccgtgtga gtacttggaa tcttgcttga attgtttttg atcaacgggt tccctgtaaa 2100
agtgtatgaa ctgcccgttc tgtggttgga aaattgctat ttccactgga tcattaaatc 2160
taccctcaat gtcaatccat gtaggagcgt tggggtcaat tcctcccatg aggtctttta 2220
aaagcattgt ctggctgtag cttaagccca cctgaggtgg acctgctgct ccaggcgctg 2280
gcctgggtga attgactgca ggtttctcgc ttgtgagatc aattgttgtg ttttcccatg 2340
ctctccccac aatcgatgtt ctacaagcta tgtatggcca tccttcacct gaaaggcaaa 2400
ctttatagag gatgttttca taagggttcc tgtccccaac ttggtctgaa acaaacatgt 2460
tgagttttct cttggccccg agaactgcct tcaagaggtc ctcgctgttg cttggcttga 2520
tcaaaattga ctctaacatg ttacccccat ccaacagggc tgcccctgcc ttcacggcag 2580
caccaagact aaagttatag ccagaaatgt tgatgctgga ctgctgttca gtgatgaccc 2640
ccagaactgg gtgcttgtct ttcagccttt caagatcatt aagatttgga tacttgactg 2700
tgtaaagcaa gccaaggtct gtgagcgctt gtacaacgtc attgagcgga gtctgtgact 2760
gtttggccat acaagccata gttagacttg gcattgtgcc aaattgattg ttcaaaagtg 2820
atgagtcttt cacatcccaa actcttacca caccacttgc accctgctga ggctttctca 2880
tcccaactat ctgtaggatc tgagatcttt ggtctagttg ctgtgttgtt aagttcccca 2940
tatatacccc tgaagcctgg ggcctttcag acctcatgat cttggccttc agcttctcaa 3000
ggtcagccgc aagagacatc agttcttctg cactgagcct ccccactttc aaaacattct 3060
tctttgatgt tgactttaaa tccacaagag aatgtacagt ctggttgaga cttctgagtc 3120
tctgtaggtc tttgtcatct ctcttttcct tcctcatgat cctctgaaca ttgctgacct 3180
cagagaagtc caacccattc agaaggttgg ttgcatcctt aatgacagca gccttcacat 3240
ctgatgtgaa gctctgcaat tctcttctca atgcttgcgt ccattggaag ctcttaactt 3300
ccttagacaa ggacatcttg ttgctcaatg gtttctcaag acaaatgcgc aatcaaatgc 3360
ctaggatcca ctgtgcg                                                3377

<210> 13
<211> 7229
<212> DNA
<213> Lymphocytic choriomeningitis virus

<220> 
<223> Lymphocytic choriomeningitis virus segment L, complete sequence

<400> 13
gcgcaccggg gatcctaggc gtttagttgc gctgtttggt tgcacaactt tcttcgtgag 60
gctgtcagaa gtggacctgg ctgatagcga tgggtcaagg caagtccaga gaggagaaag 120
gcaccaatag tacaaacagg gccgaaatcc taccagatac cacctatctt ggccctttaa 180
gctgcaaatc ttgctggcag aaatttgaca gcttggtaag atgccatgac cactaccttt 240
gcaggcactg tttaaacctt ctgctgtcag tatccgacag gtgtcctctt tgtaaatatc 300
cattaccaac cagattgaag atatcaacag ccccaagctc tccacctccc tacgaagagt 360
aacaccgtcc ggccccggcc ccgacaaaca gcccagcaca agggaaccgc acgtcaccca 420
acgcacacag acacagcacc caacacagaa cacgcacaca cacacacaca cacacccaca 480
cgcacgcgcc cccaccaccg gggggcgccc ccccccgggg ggcggccccc cgggagcccg 540
ggcggagccc cacggagatg cccatcagtc gatgtcctcg gccaccgacc cgcccagcca 600
atcgtcgcag gacctcccct tgagtctaaa cctgcccccc actgtttcat acatcaaagt 660
gctcctagat ttgctaaaac aaagtctgca atccttaaag gcgaaccagt ctggcaaaag 720
cgacagtgga atcagcagaa tagatctgtc tatacatagt tcctggagga ttacacttat 780
ctctgaaccc aacaaatgtt caccagttct gaatcgatgc aggaagaggt tcccaaggac 840
atcactaatc ttttcatagc cctcaagtcc tgctagaaag actttcatgt ccttggtctc 900
cagcttcaca atgatatttt ggacaaggtt tcttccttca aaaagggcac ccatctttac 960
agtcagtggc acaggctccc actcaggtcc aactctctca aagtcaatag atctaatccc 1020
atccagtatt cttttggagc ccaacaactc aagctcaaga gaatcaccaa gtatcaaggg 1080
atcttccatg taatcctcaa actcttcaga tctgatatca aagacaccat cgttcacctt 1140
gaagacagag tctgtcctca gtaagtggag gcattcatcc aacattcttc tatctatctc 1200
acccttaaag aggtgagagc atgataaaag ttcagccaca cctggattct gtaattggca 1260
cctaaccaag aatatcaatg aaaatttcct taaacagtca gtattattct gattgtgcgt 1320
aaagtccact gaaattgaaa actccaatac cccttttgtg tagttgagca tgtagtccca 1380
cagatccttt aaggatttaa atgcctttgg gtttgtcagg ccctgcctaa tcaacatggc 1440
agcattacac acaacatctc ccattcggta agagaaccac ccaaaaccaa actgcaaatc 1500
attcctaaac ataggcctct ccacattttt gttcaccacc tttgagacaa atgattgaaa 1560
ggggcccagt gcctcagcac catcttcaga tggcatcatt tctttatgag ggaaccatga 1620
aaaattgcct aatgtcctgg ttgttgcaac aaattctcga acaaatgatt caaaatacac 1680
ctgttttaag aagttcttgc agacatccct cgtgctaaca acaaattcat caaccagact 1740
ggagtcagat cgctgatgag aattggcaag gtcagaaaac agaacagtgt aatgttcatc 1800
ccttttccac ttaacaacat gagaaatgag tgacaaggat tctgagttaa tatcaattaa 1860
aacacagagg tcaaggaatt taattctggg actccacctc atgttttttg agctcatgtc 1920
agacataaat ggaagaagct gatcctcaaa gatcttggga tatagccgcc tcacagattg 1980
aatcacttgg ttcaaattca ctttgtcctc cagtagcctt gagctctcag gctttcttgc 2040
tacataatca catgggttta agtgcttaag agttaggttc tcactgttat tcttcccttt 2100
ggtcggttct gctaggaccc aaacacccaa ctcaaaagag ttgctcaatg aaatacaaat 2160
gtagtcccaa agaagaggcc ttaaaaggca tatatgatca cggtgggctt ctggatgaga 2220
ctgtttgtca caaatgtaca gcgttatacc atcccgattg caaactcttg tcacatgatc 2280
atctgtggtt agatcctcaa gcagcttttt gatatacaga ttttccctat ttttgtttct 2340
cacacacctg cttcctagag ttttgcaaag gcctataaag ccagatgaga tacaactctg 2400
gaaagctgac ttgttgattg cttctgacag cagcttctgt gcaccccttg tgaatttact 2460
acaaagtttg ttctggagtg tcttgatcaa tgatgggatt ctttcctctt ggaaagtcat 2520
cactgatgga taaaccacct tttgtcttaa aaccatcctt aatgggaaca tttcattcaa 2580
attcaaccag ttaacatctg ctaactgatt cagatcttct tcaagaccga ggaggtctcc 2640
caattgaaga atggcctcct ttttatctct gttaaatagg tctaagaaaa attcttcatt 2700
aaattcacca tttttgagct tatgatgcag tttccttaca agctttctta caacctttgt 2760
ttcattagga cacagttcct caatgagtct ttgtattctg taacctctag aaccatccag 2820
ccaatctttc acatcagtgt tggtattcag tagaaatgga tccaaaggga aattggcata 2880
ctttaggagg tccagtgttc tcctttggat actattaact agggagactg ggacgccatt 2940
tgcgatggct tgatctgcaa ttgtatctat tgtttcacaa agttgatgtg gctctttaca 3000
cttgacattg tgtagcgctg cagatacaaa ctttgtgaga agagggactt cctcccccca 3060
tacatagaat ctagatttaa attctgcagc gaacctccca gccacacttt ttgggctgat 3120
aaatttgttt aacaagccgc tcagatgaga ttggaattcc aacaggacaa ggacttcctc 3180
cggatcactt acaaccaggt cactcagcct cctatcaaat aaagtgatct gatcatcact 3240
tgatgtgtaa gcctctggtc tttcgccaaa gataacacca atgcagtagt tgatgaacct 3300
ctcgctaagc aaaccataga agtcagaagc attatgcaag attccctgcc ccatatcaat 3360
aaggctggat atatgggatg gcactatccc catttcaaaa tattgtctga aaattctctc 3420
agtaacagtt gtttctgaac ccctgagaag ttttagcttc gacttgacat atgatttcat 3480
cattgcattc acaacaggaa aggggacctc gacaagctta tgcatgtgcc aagttaacaa 3540
agtgctaaca tgatctttcc cggaacgcac atactggtca tcacctagtt tgagattttg 3600
tagaaacatt aagaacaaaa atgggcacat cattggtccc catttgctgt gatccatact 3660
atagtttaag aacccttccc gcacattgat agtcattgac aagattgcat tttcaaattc 3720
cttatcattg tttaaacagg agcctgaaaa gaaacttgaa aaagactcaa aataatcttc 3780
tattaacctt gtgaacattt ttgtcctcaa atctccaata tagagttctc tatttccccc 3840
aacctgctct ttataagata gtgcaaattt cagccttcca gagtcaggac ctactgaggt 3900
gtatgatgtt ggtgattctt ctgagtagaa gcacagattt ttcaaagcag cactcataca 3960
ttgtgtcaac gacagagctt tactaaggga ctcagaatta ctttccctct cactgattct 4020
cacgtcttct tccagtttgt cccagtcaaa tttgaaattc aagccttgcc tttgcatatg 4080
cctgtatttc cctgagtacg catttgcatt catttgcaac agaatcatct tcatgcaaga 4140
aaaccaatca ttctcagaaa agaactttct acaaaggttt tttgccatct catcgaggcc 4200
acactgatct ttaatgactg aggtgaaata caaaggtgac agctctgtgg aaccctcaac 4260
agcctcacag ataaatttca tgtcatcatt ggttagacat gatgggtcaa agtcttctac 4320
taaatggaaa gatatttctg acaagataac ttttcttaag tgagccatct tccctgttag 4380
aataagctgt aaatgatgta gtccttttgt atttgtaagt ttttctccat ctcctttgtc 4440
attggccctc ctacctcttc tgtaccgtgc tattgtggtg ttgacctttt cttcgagact 4500
tttgaagaag cttgtctctt cttctccatc aaaacatatt tctgccaggt tgtcttccga 4560
tctccctgtc tcttctccct tggaaccgat gaccaatcta gagactaact tggaaacttt 4620
atattcatag tctgagtggc tcaacttata cttttgtttt cttacgaaac tctccgtaat 4680
ttgactcaca gcactaacaa gcaatttgtt aaagtcatat tccagaagtc gttctccatt 4740
tagatgctta ttaaccacca cacttttgtt actagcaaga tctaatgctg tcgcacatcc 4800
agagttagtc atgggatcta ggctgtttag cttcttctct cctttgaaaa ttaaagtgcc 4860
gttgttaaat gaagacacca ttaggctaaa ggcttccaga ttaacacctg gagttgtatg 4920
ctgacagtca atttctttac tagtgaatct cttcatttgc tcatagaaca cacattcttc 4980
ctcaggagtg attgcttcct tggggttgac aaaaaaacca aattgacttt tgggctcaaa 5040
gaacttttca aaacatttta tctgatctgt tagcctgtca ggggtctcct ttgtgatcaa 5100
atgacacagg tatgacacat tcaacataaa tttaaatttt gcactcaaca acaccttctc 5160
accagtacca aaaatagttt ttattaggaa tctaagcagc ttatacacca ccttctcagc 5220
aggtgtgatc agatcctccc tcaacttatc cattaatgat gtagatgaaa aatctgacac 5280
tattgccatc accaaatatc tgacactctg tacctgcttt tgatttctct ttgttgggtt 5340
ggtgagcatt agcaacaata gggtcctcag tgcaacctca atgtcggtga gacagtcttt 5400
caaatcagga catgatctaa tccatgaaat catgatgtct atcatattgt ataagacctc 5460
atctgaaaaa attggtaaaa agaacctttt aggatctgca tagaaggaaa ttaaatgacc 5520
atccgggcct tgtatggagt agcaccttga agattctcca gtcttctggt ataataggtg 5580
gtattcttca gagtccagtt ttattacttg gcaaaacact tctttgcatt ctaccacttg 5640
atatctcaca gaccctattt gattttgcct tagtctagca actgagctag ttttcatact 5700
gtttgttaag gccagacaaa cagatgataa tcttctcagg ctctgtatgt tcttcagctg 5760
ctctgtgctg ggttggaaat tgtaatcttc aaacttcgta taatacatta tcgggtgagc 5820
tccaattttc ataaagttct caaattcagt gaatggtatg tggcattctt gctcaaggtg 5880
ttcagacagt ccgtaatgct cgaaactcag tcccaccact aacaggcatt tttgaatttt 5940
tgcaatgaac tcactaatag atgccctaaa caattcctca aaagacacct ttctaaacac 6000
ctttgacttt tttctattcc tcaaaagtct aatgaactcc tctttagtgc tgtgaaagct 6060
taccagccta tcattcacac tactatagca acaacccacc cagtgtttat cattttttaa 6120
ccctttgaat ttcgactgtt ttatcaatga ggaaagacac aaaacatcca gatttaacaa 6180
ctgtctcctt ctagtattca acagtttcaa actcttgact ttgtttaaca tagagaggag 6240
cctctcatat tcagtgctag tctcacttcc cctttcgtgc ccatgggtct ctgcagttat 6300
gaatctcatc aaaggacagg attcgactgc ctccctgctt aatgttaaga tatcatcact 6360
atcagcaagg ttttcataga gctcagagaa ttccttgatc aagccttcag ggtttacttt 6420
ctgaaagttt ctctttaatt tcccactttc taaatctctt ctaaacctgc tgaaaagaga 6480
gtttattcca aaaaccacat catcacagct catgttgggg ttgatgcctt cgtggcacat 6540
cctcataatt tcatcattgt gagttgacct cgcatctttc agaattttca tagagtccat 6600
accggagcgc ttgtcgatag tagtcttcag ggactcacag agtctaaaat attcagactc 6660
ttcaaagact ttctcatttt ggttagaata ctccaaaagt ttgaataaaa ggtctctaaa 6720
tttgaagttt gcccactctg gcataaaact attatcataa tcacaacgac catctactat 6780
tggaactaat gtgacacccg caacagcaag gtcttccctg atgcatgcca atttgttagt 6840
gtcctctata aatttcttct caaaactggc tggagtgctc ctaacaaaac actcaagaag 6900
aatgagagaa ttgtctatca gcttgtaacc atcaggaatg ataagtggta gtcctgggca 6960
tacaattcca gactccacca aaattgtttc cacagactta tcgtcgtggt tgtgtgtgca 7020
gccactcttg tctgcactgt ctatttcaat gcagcgtgac agcaacttga gtccctcaat 7080
cagaaccatt ctgggttccc tttgtcccag aaagttgagt ttctgccttg acaacctctc 7140
atcctgttct atatagttta aacataactc tctcaattct gagatgattt catccattgc 7200
gcatcaaaaa gcctaggatc ctcggtgcg                                   7229
